Query 001857
Match_columns 1003
No_of_seqs 504 out of 3290
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 10:58:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001857.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001857hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0606 Microtubule-associated 100.0 1.9E-70 4.2E-75 652.4 22.1 924 19-991 242-1190(1205)
2 KOG0605 NDR and related serine 100.0 7.3E-68 1.6E-72 599.0 29.1 379 584-985 136-533 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 1.1E-64 2.3E-69 555.0 27.5 301 585-918 21-324 (357)
4 KOG0616 cAMP-dependent protein 100.0 2.4E-61 5.2E-66 515.8 22.4 288 586-910 41-333 (355)
5 KOG0694 Serine/threonine prote 100.0 3.9E-60 8.6E-65 547.7 25.6 295 584-913 363-662 (694)
6 KOG0592 3-phosphoinositide-dep 100.0 4E-57 8.8E-62 511.6 21.9 286 585-894 69-355 (604)
7 KOG0610 Putative serine/threon 100.0 3.8E-57 8.2E-62 499.9 20.7 317 585-902 73-417 (459)
8 KOG0986 G protein-coupled rece 100.0 1.2E-57 2.7E-62 506.4 15.3 360 587-995 183-562 (591)
9 KOG0690 Serine/threonine prote 100.0 9.2E-57 2E-61 483.4 14.5 303 580-916 159-465 (516)
10 KOG0612 Rho-associated, coiled 100.0 9.6E-57 2.1E-61 536.9 16.0 294 585-910 71-371 (1317)
11 KOG0575 Polo-like serine/threo 100.0 6.4E-54 1.4E-58 491.8 24.5 256 589-881 18-273 (592)
12 KOG0615 Serine/threonine prote 100.0 1.9E-54 4.1E-59 477.9 18.4 262 588-884 171-444 (475)
13 KOG0608 Warts/lats-like serine 100.0 2.3E-53 5E-58 483.4 24.3 318 589-910 629-961 (1034)
14 KOG0696 Serine/threonine prote 100.0 4.2E-53 9.1E-58 464.8 15.7 301 583-917 343-648 (683)
15 cd05599 STKc_NDR_like Catalyti 100.0 2.1E-50 4.6E-55 444.8 34.0 318 589-910 1-329 (364)
16 KOG0581 Mitogen-activated prot 100.0 1.6E-51 3.4E-56 451.6 23.3 259 585-883 75-341 (364)
17 cd05628 STKc_NDR1 Catalytic do 100.0 3.8E-50 8.2E-55 445.1 33.8 319 589-909 1-325 (363)
18 cd05629 STKc_NDR_like_fungal C 100.0 2.6E-50 5.6E-55 448.0 32.1 320 589-910 1-338 (377)
19 cd05625 STKc_LATS1 Catalytic d 100.0 5.7E-50 1.2E-54 446.0 33.0 320 590-910 2-339 (382)
20 cd05571 STKc_PKB Catalytic dom 100.0 2.5E-50 5.4E-55 439.3 29.3 284 595-912 1-288 (323)
21 cd05585 STKc_YPK1_like Catalyt 100.0 5.1E-50 1.1E-54 434.3 30.5 283 597-913 1-285 (312)
22 PTZ00263 protein kinase A cata 100.0 6.4E-50 1.4E-54 437.7 29.9 287 585-908 14-304 (329)
23 cd05612 STKc_PRKX_like Catalyt 100.0 2.4E-50 5.1E-55 432.2 25.5 285 589-910 1-289 (291)
24 cd05626 STKc_LATS2 Catalytic d 100.0 3.3E-49 7.1E-54 440.8 33.8 317 590-910 2-339 (381)
25 cd05598 STKc_LATS Catalytic do 100.0 3.8E-49 8.3E-54 437.9 32.5 321 589-910 1-335 (376)
26 cd05627 STKc_NDR2 Catalytic do 100.0 2.7E-49 5.7E-54 437.3 29.7 319 589-909 1-325 (360)
27 cd05593 STKc_PKB_gamma Catalyt 100.0 4.9E-49 1.1E-53 431.0 31.5 286 595-914 1-290 (328)
28 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.2E-49 4.8E-54 432.5 28.5 315 589-910 1-318 (350)
29 cd05587 STKc_cPKC Catalytic do 100.0 6.3E-49 1.4E-53 427.8 30.7 287 590-910 1-292 (324)
30 PTZ00426 cAMP-dependent protei 100.0 3.6E-49 7.9E-54 436.0 28.8 289 584-909 25-318 (340)
31 cd05616 STKc_cPKC_beta Catalyt 100.0 1.2E-48 2.6E-53 425.5 31.4 284 590-908 1-289 (323)
32 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.4E-49 2E-53 427.4 29.5 285 589-910 1-290 (333)
33 cd05591 STKc_nPKC_epsilon Cata 100.0 1.3E-48 2.8E-53 424.8 29.9 282 595-910 1-289 (321)
34 cd05590 STKc_nPKC_eta Catalyti 100.0 7.7E-49 1.7E-53 427.6 28.0 282 595-910 1-288 (320)
35 KOG0595 Serine/threonine-prote 100.0 2.1E-49 4.5E-54 438.4 23.1 261 586-882 7-273 (429)
36 cd05631 STKc_GRK4 Catalytic do 100.0 1.7E-48 3.7E-53 416.0 27.6 278 590-899 1-285 (285)
37 KOG0583 Serine/threonine prote 100.0 7.8E-49 1.7E-53 441.9 26.2 260 586-882 14-280 (370)
38 KOG0614 cGMP-dependent protein 100.0 6.2E-51 1.3E-55 456.5 8.3 292 586-910 417-712 (732)
39 cd05589 STKc_PKN Catalytic dom 100.0 4.4E-48 9.5E-53 421.2 29.6 286 591-911 1-293 (324)
40 KOG0695 Serine/threonine prote 100.0 1.2E-49 2.7E-54 429.1 16.8 298 582-913 243-554 (593)
41 cd05592 STKc_nPKC_theta_delta 100.0 5.2E-48 1.1E-52 420.4 29.7 282 595-912 1-285 (316)
42 cd05575 STKc_SGK Catalytic dom 100.0 4.9E-48 1.1E-52 420.7 29.1 283 595-911 1-287 (323)
43 cd05595 STKc_PKB_beta Catalyti 100.0 3.4E-48 7.4E-53 423.0 27.8 283 595-911 1-287 (323)
44 cd05586 STKc_Sck1_like Catalyt 100.0 1.9E-48 4.2E-53 424.4 25.8 282 597-911 1-289 (330)
45 cd05570 STKc_PKC Catalytic dom 100.0 6.3E-48 1.4E-52 419.5 28.8 281 595-912 1-289 (318)
46 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.2E-47 2.5E-52 419.5 30.9 283 595-911 1-296 (327)
47 cd05615 STKc_cPKC_alpha Cataly 100.0 1.3E-47 2.7E-52 418.6 30.7 276 590-899 1-281 (323)
48 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-47 2.3E-52 420.2 29.6 282 595-910 1-297 (329)
49 cd05620 STKc_nPKC_delta Cataly 100.0 9.5E-48 2.1E-52 418.3 28.4 279 595-910 1-283 (316)
50 cd05619 STKc_nPKC_theta Cataly 100.0 1.3E-47 2.8E-52 417.8 29.4 281 595-912 1-285 (316)
51 cd05623 STKc_MRCK_alpha Cataly 100.0 5.9E-47 1.3E-51 414.3 34.1 289 589-908 1-297 (332)
52 cd05604 STKc_SGK3 Catalytic do 100.0 1.7E-47 3.7E-52 416.8 29.7 283 595-911 1-287 (325)
53 cd05624 STKc_MRCK_beta Catalyt 100.0 5.8E-47 1.3E-51 414.7 33.3 290 589-909 1-298 (331)
54 cd05594 STKc_PKB_alpha Catalyt 100.0 6.9E-48 1.5E-52 419.8 25.7 284 595-912 1-289 (325)
55 cd05603 STKc_SGK2 Catalytic do 100.0 2.2E-47 4.9E-52 414.6 29.4 282 595-910 1-286 (321)
56 cd05618 STKc_aPKC_iota Catalyt 100.0 2.2E-47 4.7E-52 418.3 29.5 281 595-909 1-296 (329)
57 cd05597 STKc_DMPK_like Catalyt 100.0 8.3E-47 1.8E-51 413.5 33.3 290 589-909 1-298 (331)
58 cd05621 STKc_ROCK2 Catalytic d 100.0 4.7E-47 1E-51 424.2 31.9 290 587-909 41-338 (370)
59 cd05601 STKc_CRIK Catalytic do 100.0 3.1E-47 6.7E-52 414.4 29.5 287 589-910 1-296 (330)
60 cd05584 STKc_p70S6K Catalytic 100.0 3.4E-47 7.3E-52 414.7 29.5 284 594-911 1-292 (323)
61 cd05622 STKc_ROCK1 Catalytic d 100.0 6.1E-47 1.3E-51 423.0 32.3 292 585-909 39-338 (371)
62 cd05602 STKc_SGK1 Catalytic do 100.0 3.7E-47 8.1E-52 414.1 28.9 282 595-910 1-286 (325)
63 cd05596 STKc_ROCK Catalytic do 100.0 7.6E-47 1.7E-51 421.6 31.8 290 586-910 40-339 (370)
64 KOG0588 Serine/threonine prote 100.0 4.3E-48 9.4E-53 445.1 20.8 260 587-884 10-270 (786)
65 cd05614 STKc_MSK2_N N-terminal 100.0 9.4E-47 2E-51 410.9 30.1 288 590-910 1-302 (332)
66 cd05582 STKc_RSK_N N-terminal 100.0 3.9E-47 8.5E-52 412.2 26.1 281 595-910 2-289 (318)
67 KOG0597 Serine-threonine prote 100.0 6.6E-48 1.4E-52 436.4 13.7 256 588-882 1-256 (808)
68 cd05605 STKc_GRK4_like Catalyt 100.0 5.8E-46 1.3E-50 396.5 28.0 277 590-898 1-284 (285)
69 KOG0591 NIMA (never in mitosis 100.0 2.7E-48 5.9E-53 413.2 7.5 250 584-867 14-274 (375)
70 cd05609 STKc_MAST Catalytic do 100.0 4E-45 8.8E-50 393.0 31.8 304 589-908 1-304 (305)
71 cd05608 STKc_GRK1 Catalytic do 100.0 7.4E-46 1.6E-50 394.8 25.4 267 597-897 1-279 (280)
72 KOG0198 MEKK and related serin 100.0 1.1E-46 2.5E-51 414.7 19.2 260 588-882 16-281 (313)
73 KOG0585 Ca2+/calmodulin-depend 100.0 1.3E-46 2.9E-51 420.8 18.4 274 579-882 87-377 (576)
74 KOG0593 Predicted protein kina 100.0 5.1E-47 1.1E-51 406.6 13.6 259 588-882 1-289 (396)
75 cd05580 STKc_PKA Catalytic dom 100.0 7.3E-45 1.6E-49 387.8 29.7 284 589-909 1-288 (290)
76 KOG0580 Serine/threonine prote 100.0 5.9E-47 1.3E-51 396.4 12.3 261 583-882 16-278 (281)
77 KOG0032 Ca2+/calmodulin-depend 100.0 2.6E-45 5.6E-50 414.8 26.0 260 588-883 34-299 (382)
78 cd07848 STKc_CDKL5 Catalytic d 100.0 3.3E-45 7.2E-50 387.8 24.2 258 589-880 1-287 (287)
79 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-47 3.7E-52 400.9 5.6 259 589-883 11-273 (355)
80 KOG0661 MAPK related serine/th 100.0 9.1E-47 2E-51 422.6 10.8 259 586-882 7-296 (538)
81 cd05630 STKc_GRK6 Catalytic do 100.0 1.5E-44 3.3E-49 386.2 27.1 275 590-898 1-284 (285)
82 KOG0578 p21-activated serine/t 100.0 7.7E-46 1.7E-50 422.7 17.6 258 586-881 270-527 (550)
83 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.8E-45 1.7E-49 388.4 24.2 257 587-880 3-288 (288)
84 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-44 2.7E-49 384.7 25.5 267 597-897 1-276 (277)
85 cd05574 STKc_phototropin_like 100.0 6.6E-44 1.4E-48 384.3 29.1 305 589-899 1-311 (316)
86 cd05632 STKc_GRK5 Catalytic do 100.0 6.8E-44 1.5E-48 380.6 28.0 277 590-898 1-284 (285)
87 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.9E-44 4E-49 387.6 23.7 262 588-886 4-297 (303)
88 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.5E-44 5.5E-49 389.6 24.9 263 590-885 1-298 (338)
89 KOG0600 Cdc2-related protein k 100.0 4.9E-45 1.1E-49 411.0 17.4 260 588-882 116-405 (560)
90 cd06649 PKc_MEK2 Catalytic dom 100.0 1.7E-43 3.7E-48 386.8 27.2 258 588-883 4-307 (331)
91 KOG0611 Predicted serine/threo 100.0 5.9E-45 1.3E-49 400.1 15.0 253 589-880 53-306 (668)
92 KOG0582 Ste20-like serine/thre 100.0 7.6E-44 1.6E-48 396.9 23.9 268 585-884 22-300 (516)
93 cd07862 STKc_CDK6 Catalytic do 100.0 2.6E-43 5.7E-48 373.9 23.6 255 589-880 1-290 (290)
94 cd05611 STKc_Rim15_like Cataly 100.0 5.4E-43 1.2E-47 365.2 25.1 257 595-886 2-260 (260)
95 cd05610 STKc_MASTL Catalytic d 100.0 1.1E-42 2.4E-47 418.0 31.2 320 588-910 3-667 (669)
96 KOG0599 Phosphorylase kinase g 100.0 9.7E-45 2.1E-49 384.4 10.5 261 588-883 16-289 (411)
97 cd06625 STKc_MEKK3_like Cataly 100.0 1.5E-42 3.3E-47 361.0 26.6 260 589-880 2-263 (263)
98 cd07863 STKc_CDK4 Catalytic do 100.0 8.4E-43 1.8E-47 369.0 24.9 254 590-880 1-288 (288)
99 KOG0192 Tyrosine kinase specif 100.0 5.4E-43 1.2E-47 393.4 24.6 252 587-876 39-298 (362)
100 cd05577 STKc_GRK Catalytic dom 100.0 1.4E-42 3E-47 367.3 25.5 266 597-897 1-276 (277)
101 cd07853 STKc_NLK Catalytic dom 100.0 9.3E-43 2E-47 386.9 25.1 261 590-885 1-296 (372)
102 PHA03212 serine/threonine kina 100.0 5.9E-43 1.3E-47 394.8 23.9 256 585-883 88-382 (391)
103 PLN00034 mitogen-activated pro 100.0 5.6E-43 1.2E-47 386.0 22.5 257 585-883 70-334 (353)
104 KOG0659 Cdk activating kinase 100.0 2.3E-43 5E-48 373.7 18.6 258 589-882 2-286 (318)
105 PTZ00036 glycogen synthase kin 100.0 6.6E-43 1.4E-47 400.1 23.3 255 588-885 65-359 (440)
106 cd05633 STKc_GRK3 Catalytic do 100.0 2.5E-42 5.3E-47 368.1 26.1 261 596-892 1-270 (279)
107 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.3E-42 2.7E-47 374.4 24.1 260 587-883 4-292 (309)
108 cd06650 PKc_MEK1 Catalytic dom 100.0 2.1E-42 4.5E-47 379.6 26.2 256 588-883 4-305 (333)
109 PTZ00284 protein kinase; Provi 100.0 1E-42 2.2E-47 399.7 24.3 253 588-882 128-443 (467)
110 cd07876 STKc_JNK2 Catalytic do 100.0 2.2E-42 4.8E-47 381.6 26.0 257 587-882 19-320 (359)
111 KOG0201 Serine/threonine prote 100.0 1.1E-44 2.4E-49 403.3 7.5 258 589-884 13-270 (467)
112 cd05572 STKc_cGK_PKG Catalytic 100.0 3.4E-42 7.4E-47 359.6 25.2 257 597-886 1-261 (262)
113 cd06644 STKc_STK10_LOK Catalyt 100.0 4E-42 8.7E-47 366.4 25.6 266 589-891 12-283 (292)
114 PTZ00267 NIMA-related protein 100.0 4.1E-42 9E-47 397.0 27.6 258 588-882 66-328 (478)
115 cd05579 STKc_MAST_like Catalyt 100.0 2.9E-42 6.2E-47 356.3 23.4 265 597-885 1-265 (265)
116 KOG0663 Protein kinase PITSLRE 100.0 2.5E-43 5.5E-48 382.0 15.9 262 586-883 73-367 (419)
117 KOG0660 Mitogen-activated prot 100.0 4.6E-43 9.9E-48 383.9 17.6 261 589-883 22-316 (359)
118 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.2E-42 6.9E-47 375.7 24.1 257 585-876 3-329 (338)
119 cd07875 STKc_JNK1 Catalytic do 100.0 5.3E-42 1.1E-46 379.3 25.9 257 587-882 22-323 (364)
120 KOG4717 Serine/threonine prote 100.0 3.8E-43 8.3E-48 393.6 16.7 260 587-885 16-278 (864)
121 cd08223 STKc_Nek4 Catalytic do 100.0 1.5E-41 3.3E-46 352.3 27.2 254 590-880 1-257 (257)
122 PF00069 Pkinase: Protein kina 100.0 1.4E-42 3E-47 359.2 19.2 255 591-880 1-260 (260)
123 cd08529 STKc_FA2-like Catalyti 100.0 1.8E-41 4E-46 350.8 27.3 254 590-880 1-256 (256)
124 KOG0589 Serine/threonine prote 100.0 5.7E-43 1.2E-47 395.9 17.4 258 588-882 3-263 (426)
125 cd07874 STKc_JNK3 Catalytic do 100.0 5.1E-42 1.1E-46 377.7 24.3 257 587-882 15-316 (355)
126 PTZ00283 serine/threonine prot 100.0 6.5E-42 1.4E-46 398.1 26.4 260 588-882 31-302 (496)
127 cd05606 STKc_beta_ARK Catalyti 100.0 1.4E-41 3E-46 361.6 26.5 261 596-892 1-270 (278)
128 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-41 2.8E-46 355.8 25.5 262 590-880 1-265 (265)
129 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.7E-42 5.9E-47 377.5 21.2 256 588-883 14-304 (343)
130 cd06611 STKc_SLK_like Catalyti 100.0 6.3E-42 1.4E-46 361.5 23.2 260 589-885 5-270 (280)
131 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.8E-41 3.9E-46 354.4 25.8 261 590-880 1-267 (267)
132 cd06643 STKc_SLK Catalytic dom 100.0 2E-41 4.2E-46 358.8 25.2 256 591-883 7-268 (282)
133 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.3E-41 2.9E-46 364.6 24.0 260 587-883 4-292 (301)
134 cd06645 STKc_MAP4K3 Catalytic 100.0 8.9E-42 1.9E-46 357.4 22.1 255 588-879 8-267 (267)
135 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.6E-41 7.7E-46 350.1 26.2 260 589-880 1-267 (267)
136 cd06619 PKc_MKK5 Catalytic dom 100.0 3.2E-41 7E-46 357.9 26.0 252 589-884 1-260 (279)
137 cd06615 PKc_MEK Catalytic doma 100.0 3.6E-41 7.8E-46 364.0 26.4 256 589-882 1-292 (308)
138 cd05578 STKc_Yank1 Catalytic d 100.0 1.5E-41 3.3E-46 353.9 22.5 253 590-880 1-258 (258)
139 KOG0594 Protein kinase PCTAIRE 100.0 4.5E-42 9.8E-47 375.9 18.6 260 588-883 10-308 (323)
140 cd06646 STKc_MAP4K5 Catalytic 100.0 2.7E-41 5.8E-46 353.7 23.3 255 588-879 8-267 (267)
141 cd07861 STKc_CDK1_euk Catalyti 100.0 3.3E-41 7.2E-46 355.6 24.0 255 590-880 1-285 (285)
142 KOG0579 Ste20-like serine/thre 100.0 4.9E-43 1.1E-47 398.4 10.7 262 589-887 32-299 (1187)
143 PHA03207 serine/threonine kina 100.0 2.2E-41 4.8E-46 380.1 24.0 260 589-889 92-387 (392)
144 cd06613 STKc_MAP4K3_like Catal 100.0 7.5E-41 1.6E-45 347.4 26.2 254 589-879 3-262 (262)
145 cd06630 STKc_MEKK1 Catalytic d 100.0 4E-41 8.6E-46 351.3 23.9 262 590-881 1-268 (268)
146 cd06651 STKc_MEKK3 Catalytic d 100.0 7.4E-41 1.6E-45 351.5 25.9 260 589-881 2-265 (266)
147 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-40 2.6E-45 349.2 27.2 260 589-881 2-265 (265)
148 cd06654 STKc_PAK1 Catalytic do 100.0 9.1E-41 2E-45 359.0 26.9 260 585-882 16-275 (296)
149 PHA02988 hypothetical protein; 100.0 5.8E-41 1.3E-45 359.8 24.9 242 595-876 26-274 (283)
150 cd06609 STKc_MST3_like Catalyt 100.0 5.5E-41 1.2E-45 353.3 24.1 257 589-884 1-258 (274)
151 cd07847 STKc_CDKL1_4 Catalytic 100.0 7.8E-41 1.7E-45 352.3 25.3 257 589-880 1-286 (286)
152 cd08218 STKc_Nek1 Catalytic do 100.0 1.5E-40 3.2E-45 345.4 26.9 254 590-880 1-256 (256)
153 cd07868 STKc_CDK8 Catalytic do 100.0 2.4E-41 5.1E-46 364.6 21.7 250 594-880 6-317 (317)
154 cd05061 PTKc_InsR Catalytic do 100.0 8.7E-41 1.9E-45 356.1 25.7 264 586-885 3-288 (288)
155 cd06612 STKc_MST1_2 Catalytic 100.0 5.3E-41 1.1E-45 347.4 23.3 253 589-880 3-256 (256)
156 KOG0658 Glycogen synthase kina 100.0 4E-42 8.6E-47 377.1 15.4 251 590-883 25-312 (364)
157 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.4E-41 9.6E-46 356.2 22.7 257 589-883 1-268 (286)
158 KOG0667 Dual-specificity tyros 100.0 3.1E-41 6.8E-46 390.5 23.1 252 590-883 187-508 (586)
159 cd08227 PK_STRAD_alpha Pseudok 100.0 4.6E-41 1E-45 366.1 23.0 264 593-884 2-314 (327)
160 cd06639 STKc_myosinIIIB Cataly 100.0 3E-40 6.5E-45 351.3 28.4 259 585-881 18-291 (291)
161 cd06637 STKc_TNIK Catalytic do 100.0 7.1E-41 1.5E-45 350.8 23.1 253 589-880 6-272 (272)
162 cd08221 STKc_Nek9 Catalytic do 100.0 3E-40 6.5E-45 343.1 27.6 254 590-880 1-256 (256)
163 cd05048 PTKc_Ror Catalytic Dom 100.0 5.3E-41 1.1E-45 354.4 22.3 256 586-877 2-279 (283)
164 cd06608 STKc_myosinIII_like Ca 100.0 1.3E-40 2.8E-45 346.6 24.8 255 588-880 5-275 (275)
165 cd08217 STKc_Nek2 Catalytic do 100.0 1.9E-40 4.1E-45 342.8 25.7 254 590-880 1-265 (265)
166 cd06638 STKc_myosinIIIA Cataly 100.0 2E-40 4.3E-45 350.5 26.4 257 586-880 15-286 (286)
167 cd06656 STKc_PAK3 Catalytic do 100.0 1.3E-40 2.7E-45 358.0 24.8 258 587-882 17-274 (297)
168 cd07839 STKc_CDK5 Catalytic do 100.0 4.6E-41 1E-45 355.0 20.5 255 590-880 1-284 (284)
169 cd06605 PKc_MAPKK Catalytic do 100.0 8.6E-41 1.9E-45 348.2 22.2 254 589-882 1-262 (265)
170 cd06655 STKc_PAK2 Catalytic do 100.0 2.3E-40 4.9E-45 356.4 26.1 257 588-882 18-274 (296)
171 PHA03209 serine/threonine kina 100.0 4.7E-41 1E-45 372.6 21.5 251 588-883 65-357 (357)
172 cd08220 STKc_Nek8 Catalytic do 100.0 3.1E-40 6.8E-45 341.6 26.1 253 590-880 1-256 (256)
173 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-40 3E-45 347.9 23.3 275 589-880 1-280 (280)
174 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.7E-40 5.8E-45 349.5 25.7 255 587-880 14-282 (282)
175 cd06623 PKc_MAPKK_plant_like C 100.0 3.1E-40 6.8E-45 342.4 25.4 258 589-884 1-263 (264)
176 cd05583 STKc_MSK_N N-terminal 100.0 3.2E-40 6.9E-45 350.6 25.8 269 590-891 1-280 (288)
177 cd08219 STKc_Nek3 Catalytic do 100.0 4.5E-40 9.8E-45 342.3 25.8 250 590-877 1-252 (255)
178 cd06632 STKc_MEKK1_plant Catal 100.0 3.9E-40 8.4E-45 340.6 25.1 255 590-880 1-258 (258)
179 cd05613 STKc_MSK1_N N-terminal 100.0 4.4E-40 9.5E-45 349.9 26.2 268 590-890 1-281 (290)
180 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.2E-40 2.5E-45 351.7 21.2 257 589-880 1-286 (286)
181 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.6E-40 7.9E-45 347.5 24.4 252 588-876 4-260 (266)
182 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.2E-40 4.7E-45 351.8 22.7 256 587-882 3-271 (284)
183 cd05096 PTKc_DDR1 Catalytic do 100.0 4.7E-40 1E-44 353.1 25.4 255 588-876 4-300 (304)
184 cd07832 STKc_CCRK Catalytic do 100.0 3.9E-40 8.5E-45 347.0 24.1 257 590-881 1-286 (286)
185 KOG0607 MAP kinase-interacting 100.0 1.2E-41 2.7E-46 366.6 12.8 288 591-909 79-392 (463)
186 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.8E-40 1.7E-44 344.9 26.1 258 589-886 1-270 (283)
187 cd08228 STKc_Nek6 Catalytic do 100.0 7.7E-40 1.7E-44 342.1 25.9 255 588-877 1-261 (267)
188 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.9E-40 1.3E-44 344.5 25.1 259 590-880 2-272 (272)
189 cd07841 STKc_CDK7 Catalytic do 100.0 2.7E-40 5.8E-45 352.2 22.5 259 590-883 1-288 (298)
190 KOG0604 MAP kinase-activated p 100.0 1.3E-41 2.8E-46 364.6 12.2 253 587-882 59-327 (400)
191 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-39 2.8E-44 338.5 26.3 258 590-880 1-264 (264)
192 PHA03390 pk1 serine/threonine- 100.0 5.6E-40 1.2E-44 347.9 23.9 249 589-882 14-267 (267)
193 cd07844 STKc_PCTAIRE_like Cata 100.0 6.1E-40 1.3E-44 348.3 23.9 257 587-880 3-291 (291)
194 cd06640 STKc_MST4 Catalytic do 100.0 4.3E-40 9.3E-45 348.3 22.6 258 589-885 4-261 (277)
195 cd06624 STKc_ASK Catalytic dom 100.0 1.5E-39 3.2E-44 341.4 26.5 255 589-880 8-268 (268)
196 cd07833 STKc_CDKL Catalytic do 100.0 7.6E-40 1.6E-44 345.1 24.4 258 589-880 1-288 (288)
197 cd05088 PTKc_Tie2 Catalytic do 100.0 1E-39 2.2E-44 352.0 25.5 254 585-877 3-276 (303)
198 cd07867 STKc_CDC2L6 Catalytic 100.0 3.9E-40 8.4E-45 354.0 22.1 249 595-880 7-317 (317)
199 cd05106 PTKc_CSF-1R Catalytic 100.0 3.3E-40 7.2E-45 369.2 22.4 258 584-876 33-367 (374)
200 cd08215 STKc_Nek Catalytic dom 100.0 2E-39 4.3E-44 333.2 26.1 254 590-880 1-258 (258)
201 cd06648 STKc_PAK_II Catalytic 100.0 1.4E-39 3.1E-44 347.4 26.0 256 590-883 20-275 (285)
202 cd05090 PTKc_Ror1 Catalytic do 100.0 1E-39 2.2E-44 345.8 24.6 255 587-877 3-279 (283)
203 cd07850 STKc_JNK Catalytic dom 100.0 6.7E-40 1.5E-44 361.1 24.1 256 587-881 14-315 (353)
204 cd05049 PTKc_Trk Catalytic dom 100.0 6.4E-40 1.4E-44 345.0 22.7 253 588-876 4-276 (280)
205 cd07860 STKc_CDK2_3 Catalytic 100.0 5.6E-40 1.2E-44 346.8 22.3 255 590-880 1-284 (284)
206 cd06606 STKc_MAPKKK Catalytic 100.0 3.5E-39 7.6E-44 330.2 27.3 257 590-880 1-260 (260)
207 KOG0586 Serine/threonine prote 100.0 2.1E-40 4.6E-45 380.9 20.5 260 584-882 51-311 (596)
208 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.8E-39 6.2E-44 339.2 27.0 259 589-880 2-264 (264)
209 PHA03211 serine/threonine kina 100.0 7.9E-40 1.7E-44 378.3 25.0 253 588-882 168-460 (461)
210 cd07837 STKc_CdkB_plant Cataly 100.0 8.9E-40 1.9E-44 347.1 23.0 257 589-881 1-295 (295)
211 cd07845 STKc_CDK10 Catalytic d 100.0 9.5E-40 2.1E-44 351.5 23.5 260 587-882 5-295 (309)
212 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.5E-40 3.2E-45 351.2 16.6 258 590-886 5-262 (277)
213 cd06627 STKc_Cdc7_like Catalyt 100.0 3.6E-39 7.8E-44 332.0 26.3 254 590-880 1-254 (254)
214 cd05052 PTKc_Abl Catalytic dom 100.0 1.9E-39 4.2E-44 340.3 24.7 252 586-876 3-257 (263)
215 cd08225 STKc_Nek5 Catalytic do 100.0 1.7E-39 3.6E-44 336.4 23.7 254 590-880 1-257 (257)
216 cd05062 PTKc_IGF-1R Catalytic 100.0 1.5E-39 3.4E-44 343.5 23.9 255 587-877 4-274 (277)
217 cd06659 STKc_PAK6 Catalytic do 100.0 6E-40 1.3E-44 353.3 21.0 256 589-882 21-276 (297)
218 cd06641 STKc_MST3 Catalytic do 100.0 2.5E-39 5.4E-44 342.5 25.3 253 591-882 6-258 (277)
219 cd06647 STKc_PAK_I Catalytic d 100.0 1.5E-39 3.2E-44 349.1 23.9 260 586-883 16-275 (293)
220 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-39 2.3E-44 347.4 22.6 257 588-880 4-293 (293)
221 cd07836 STKc_Pho85 Catalytic d 100.0 1.7E-39 3.6E-44 342.5 23.8 254 590-880 1-284 (284)
222 cd05104 PTKc_Kit Catalytic dom 100.0 8.1E-40 1.8E-44 365.8 22.7 259 584-877 30-370 (375)
223 cd07865 STKc_CDK9 Catalytic do 100.0 2E-39 4.4E-44 345.4 24.6 264 585-880 8-310 (310)
224 cd05032 PTKc_InsR_like Catalyt 100.0 2.9E-39 6.4E-44 339.5 25.5 255 586-876 3-273 (277)
225 PLN00009 cyclin-dependent kina 100.0 1.4E-39 3.1E-44 346.6 23.3 260 588-883 1-290 (294)
226 cd06658 STKc_PAK5 Catalytic do 100.0 4.4E-40 9.5E-45 353.6 19.4 257 589-883 22-278 (292)
227 cd05122 PKc_STE Catalytic doma 100.0 6.6E-39 1.4E-43 326.8 27.1 250 590-879 1-253 (253)
228 cd06614 STKc_PAK Catalytic dom 100.0 2.8E-39 6.1E-44 343.0 25.3 262 587-886 17-279 (286)
229 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.5E-39 5.5E-44 337.5 24.4 249 588-876 3-253 (256)
230 cd06917 STKc_NAK1_like Catalyt 100.0 1.6E-39 3.5E-44 342.1 23.1 256 590-884 2-262 (277)
231 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.2E-39 1.1E-43 342.3 27.2 259 589-885 1-274 (287)
232 PTZ00266 NIMA-related protein 100.0 1.5E-39 3.2E-44 398.6 25.6 262 586-885 10-303 (1021)
233 cd06607 STKc_TAO Catalytic dom 100.0 3.8E-39 8.3E-44 347.0 25.9 254 589-882 15-272 (307)
234 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-39 3.4E-44 339.8 22.2 254 588-876 1-260 (267)
235 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.6E-39 1.2E-43 334.3 26.2 252 589-876 2-260 (267)
236 cd05093 PTKc_TrkB Catalytic do 100.0 2.6E-39 5.7E-44 344.7 24.2 251 589-876 5-274 (288)
237 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.2E-39 4.8E-44 344.7 23.4 256 588-880 4-291 (291)
238 KOG0574 STE20-like serine/thre 100.0 4.7E-42 1E-46 367.0 2.9 256 589-883 33-289 (502)
239 cd00192 PTKc Catalytic domain 100.0 3.6E-39 7.9E-44 331.9 24.2 247 595-877 1-260 (262)
240 cd07831 STKc_MOK Catalytic dom 100.0 2.4E-39 5.2E-44 340.3 23.2 251 591-880 1-282 (282)
241 cd05035 PTKc_Axl_like Catalyti 100.0 3.6E-39 7.9E-44 336.8 24.1 252 591-877 1-268 (273)
242 cd08530 STKc_CNK2-like Catalyt 100.0 4.9E-39 1.1E-43 332.0 24.6 252 590-880 1-256 (256)
243 cd06616 PKc_MKK4 Catalytic dom 100.0 2.4E-39 5.2E-44 343.3 22.6 263 588-888 3-278 (288)
244 cd05091 PTKc_Ror2 Catalytic do 100.0 1.2E-39 2.7E-44 344.6 20.4 255 587-877 3-279 (283)
245 cd05053 PTKc_FGFR Catalytic do 100.0 5.9E-39 1.3E-43 341.1 25.5 257 585-877 8-287 (293)
246 cd05072 PTKc_Lyn Catalytic dom 100.0 5.3E-39 1.2E-43 335.4 24.7 251 586-876 3-256 (261)
247 cd05123 STKc_AGC Catalytic dom 100.0 3.2E-39 6.9E-44 333.0 22.7 247 597-880 1-250 (250)
248 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-39 3.9E-44 347.4 21.5 259 590-880 1-316 (316)
249 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.1E-39 8.9E-44 340.8 24.0 254 588-877 5-274 (277)
250 cd05051 PTKc_DDR Catalytic dom 100.0 4.7E-39 1E-43 341.7 24.0 255 588-876 4-292 (296)
251 cd07849 STKc_ERK1_2_like Catal 100.0 2.2E-39 4.7E-44 354.3 21.9 260 589-883 5-298 (336)
252 KOG4279 Serine/threonine prote 100.0 3.6E-40 7.9E-45 378.2 15.7 250 595-883 581-838 (1226)
253 cd05108 PTKc_EGFR Catalytic do 100.0 5.3E-39 1.2E-43 347.8 23.7 254 587-877 5-264 (316)
254 cd05084 PTKc_Fes Catalytic dom 100.0 5.6E-39 1.2E-43 333.5 23.0 246 595-876 1-248 (252)
255 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.2E-39 1.3E-43 353.1 24.4 256 588-883 14-304 (343)
256 cd07855 STKc_ERK5 Catalytic do 100.0 1.9E-39 4.2E-44 354.3 20.2 262 589-882 5-299 (334)
257 cd05033 PTKc_EphR Catalytic do 100.0 1.2E-38 2.6E-43 334.2 25.2 254 588-877 3-261 (266)
258 cd07835 STKc_CDK1_like Catalyt 100.0 3.8E-39 8.2E-44 340.3 21.5 254 591-880 1-283 (283)
259 cd05089 PTKc_Tie1 Catalytic do 100.0 9.6E-39 2.1E-43 342.4 24.6 250 589-877 2-271 (297)
260 PHA03210 serine/threonine kina 100.0 3.4E-39 7.3E-44 375.5 22.7 268 587-888 146-465 (501)
261 cd07838 STKc_CDK4_6_like Catal 100.0 1.1E-38 2.4E-43 335.5 24.4 253 591-880 1-287 (287)
262 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.4E-39 9.5E-44 352.5 22.0 259 589-883 5-297 (337)
263 cd05082 PTKc_Csk Catalytic dom 100.0 1.4E-38 3E-43 331.9 24.4 246 585-876 2-251 (256)
264 cd05054 PTKc_VEGFR Catalytic d 100.0 4.5E-39 9.7E-44 354.6 21.8 259 584-877 2-329 (337)
265 cd05116 PTKc_Syk Catalytic dom 100.0 8.5E-39 1.8E-43 334.3 22.8 246 596-876 2-250 (257)
266 cd05109 PTKc_HER2 Catalytic do 100.0 1.4E-38 3E-43 336.5 24.3 253 587-876 5-263 (279)
267 cd07834 STKc_MAPK Catalytic do 100.0 3.2E-39 7E-44 349.9 19.7 261 590-883 1-295 (330)
268 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-38 2.8E-43 343.0 24.2 256 586-877 15-295 (307)
269 cd05075 PTKc_Axl Catalytic dom 100.0 1E-38 2.2E-43 334.5 22.9 252 591-877 1-267 (272)
270 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-38 2.8E-43 339.3 23.6 268 588-880 7-311 (311)
271 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.2E-38 4.9E-43 332.1 24.7 250 588-877 3-254 (256)
272 cd05068 PTKc_Frk_like Catalyti 100.0 3.2E-38 6.8E-43 330.1 25.5 250 587-876 4-256 (261)
273 cd08226 PK_STRAD_beta Pseudoki 100.0 4.1E-39 8.9E-44 351.0 19.5 260 596-883 5-314 (328)
274 cd05039 PTKc_Csk_like Catalyti 100.0 3.2E-38 6.9E-43 328.6 25.3 245 587-876 4-251 (256)
275 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-38 2.6E-43 333.0 22.2 250 588-877 3-254 (256)
276 cd07879 STKc_p38delta_MAPK13 C 100.0 7.6E-39 1.6E-43 351.8 21.7 256 589-885 15-305 (342)
277 cd05094 PTKc_TrkC Catalytic do 100.0 1.8E-38 3.9E-43 338.8 23.9 252 588-876 4-277 (291)
278 cd05092 PTKc_TrkA Catalytic do 100.0 1.5E-38 3.3E-43 337.6 22.9 252 588-876 4-276 (280)
279 cd05148 PTKc_Srm_Brk Catalytic 100.0 8E-39 1.7E-43 333.4 20.3 249 588-876 5-256 (261)
280 cd06633 STKc_TAO3 Catalytic do 100.0 4.8E-38 1E-42 341.0 26.8 254 591-884 23-280 (313)
281 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.9E-38 8.6E-43 340.8 25.9 255 586-876 9-288 (314)
282 cd05046 PTK_CCK4 Pseudokinase 100.0 2.6E-38 5.6E-43 332.6 23.7 254 588-877 4-272 (275)
283 cd06635 STKc_TAO1 Catalytic do 100.0 4.3E-38 9.2E-43 341.4 25.9 254 589-882 25-282 (317)
284 cd05060 PTKc_Syk_like Catalyti 100.0 3.7E-38 8E-43 328.9 24.5 246 595-876 1-250 (257)
285 cd07840 STKc_CDK9_like Catalyt 100.0 2.5E-38 5.3E-43 332.2 23.2 255 591-880 1-287 (287)
286 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.1E-38 6.6E-43 358.3 25.5 259 583-876 31-392 (400)
287 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.4E-38 7.3E-43 329.7 23.7 249 586-875 3-254 (260)
288 KOG0197 Tyrosine kinases [Sign 100.0 3.3E-39 7.1E-44 367.1 17.3 248 584-868 201-451 (468)
289 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.6E-38 7.9E-43 347.2 24.8 255 588-882 16-305 (345)
290 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.8E-38 8.2E-43 338.4 24.0 258 584-877 10-292 (304)
291 PTZ00024 cyclin-dependent prot 100.0 3.5E-38 7.6E-43 343.6 24.1 274 589-883 8-319 (335)
292 cd05055 PTKc_PDGFR Catalytic d 100.0 3.8E-38 8.3E-43 340.1 24.1 258 584-876 30-296 (302)
293 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.5E-38 1.2E-42 328.1 24.5 249 587-876 4-255 (260)
294 cd05115 PTKc_Zap-70 Catalytic 100.0 4.6E-38 9.9E-43 330.5 23.8 244 596-875 2-249 (257)
295 cd05065 PTKc_EphR_B Catalytic 100.0 6.6E-38 1.4E-42 329.1 25.0 256 588-876 3-263 (269)
296 cd07864 STKc_CDK12 Catalytic d 100.0 2.7E-38 5.8E-43 336.8 22.3 259 587-880 5-302 (302)
297 cd05066 PTKc_EphR_A Catalytic 100.0 4.8E-38 1E-42 330.4 23.9 254 588-876 3-261 (267)
298 cd07851 STKc_p38 Catalytic dom 100.0 1.8E-38 3.9E-43 348.9 21.6 255 588-882 14-303 (343)
299 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.8E-38 1.7E-42 327.8 24.9 254 588-876 4-262 (268)
300 KOG4236 Serine/threonine prote 100.0 2.2E-39 4.7E-44 364.2 13.8 261 591-890 564-833 (888)
301 cd08222 STKc_Nek11 Catalytic d 100.0 2.3E-38 5E-43 330.4 20.6 254 590-880 1-260 (260)
302 PRK13184 pknD serine/threonine 100.0 6.9E-38 1.5E-42 382.4 27.9 273 588-876 1-285 (932)
303 cd05050 PTKc_Musk Catalytic do 100.0 4.7E-38 1E-42 334.0 23.1 253 588-876 4-284 (288)
304 cd05045 PTKc_RET Catalytic dom 100.0 6.2E-38 1.4E-42 333.9 24.1 251 590-876 1-281 (290)
305 cd05071 PTKc_Src Catalytic dom 100.0 6.1E-38 1.3E-42 329.9 23.5 248 588-876 5-255 (262)
306 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.2E-38 9.2E-43 345.8 23.2 259 589-883 5-306 (342)
307 cd05047 PTKc_Tie Catalytic dom 100.0 9.4E-38 2E-42 329.3 24.8 242 596-876 2-263 (270)
308 cd05118 STKc_CMGC Catalytic do 100.0 2.7E-38 5.9E-43 331.8 20.6 254 591-880 1-283 (283)
309 smart00219 TyrKc Tyrosine kina 100.0 8.2E-38 1.8E-42 322.6 23.7 249 591-876 1-256 (258)
310 cd05097 PTKc_DDR_like Catalyti 100.0 4.5E-38 9.8E-43 336.4 22.6 254 589-876 5-291 (295)
311 cd07857 STKc_MPK1 Catalytic do 100.0 5.3E-38 1.1E-42 342.8 23.5 260 590-881 1-296 (332)
312 cd05034 PTKc_Src_like Catalyti 100.0 1.4E-37 3E-42 324.1 25.5 251 586-876 3-256 (261)
313 cd06657 STKc_PAK4 Catalytic do 100.0 3E-38 6.5E-43 339.8 21.2 254 591-882 22-275 (292)
314 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1E-37 2.2E-42 341.8 25.6 255 588-882 9-293 (328)
315 cd06618 PKc_MKK7 Catalytic dom 100.0 8.4E-38 1.8E-42 334.5 24.3 260 585-882 11-278 (296)
316 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.2E-38 1.6E-42 342.0 24.1 257 585-877 8-289 (334)
317 cd05040 PTKc_Ack_like Catalyti 100.0 9.7E-38 2.1E-42 324.5 23.6 247 595-876 1-253 (257)
318 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-37 3.2E-42 330.4 25.3 253 587-876 5-263 (279)
319 KOG4721 Serine/threonine prote 100.0 4E-39 8.6E-44 364.8 14.0 247 584-878 119-365 (904)
320 KOG1989 ARK protein kinase fam 100.0 2.8E-38 6.1E-43 375.0 21.5 256 589-877 37-307 (738)
321 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.1E-38 1.1E-42 345.8 22.0 259 584-877 2-335 (343)
322 KOG0596 Dual specificity; seri 100.0 1.8E-38 3.9E-43 360.3 18.5 256 589-882 361-632 (677)
323 cd06634 STKc_TAO2 Catalytic do 100.0 1.2E-37 2.6E-42 336.7 24.1 255 589-883 15-273 (308)
324 KOG0577 Serine/threonine prote 100.0 3.4E-39 7.4E-44 366.3 12.5 251 591-882 28-283 (948)
325 cd07829 STKc_CDK_like Catalyti 100.0 5.3E-38 1.2E-42 329.5 20.6 254 591-880 1-282 (282)
326 cd05069 PTKc_Yes Catalytic dom 100.0 1.7E-37 3.8E-42 325.0 24.4 248 588-876 5-255 (260)
327 cd05112 PTKc_Itk Catalytic dom 100.0 2.1E-37 4.5E-42 321.9 24.7 250 588-877 3-254 (256)
328 cd05057 PTKc_EGFR_like Catalyt 100.0 2.1E-37 4.6E-42 327.5 25.3 252 588-876 6-263 (279)
329 cd05095 PTKc_DDR2 Catalytic do 100.0 1.5E-37 3.3E-42 332.4 24.2 254 589-876 5-292 (296)
330 cd05576 STKc_RPK118_like Catal 100.0 6.1E-38 1.3E-42 326.3 20.2 232 600-880 4-237 (237)
331 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.8E-37 6E-42 327.3 25.6 251 591-876 6-276 (283)
332 cd08216 PK_STRAD Pseudokinase 100.0 5.2E-38 1.1E-42 337.6 20.2 255 601-883 12-301 (314)
333 cd07830 STKc_MAK_like Catalyti 100.0 1.3E-37 2.8E-42 328.0 22.7 252 591-880 1-283 (283)
334 cd07852 STKc_MAPK15 Catalytic 100.0 4.2E-38 9.1E-43 343.8 19.7 265 587-883 5-301 (337)
335 KOG4645 MAPKKK (MAP kinase kin 100.0 6.5E-40 1.4E-44 397.0 5.9 259 590-881 1236-1498(1509)
336 cd05085 PTKc_Fer Catalytic dom 100.0 2.8E-37 6.1E-42 319.8 24.2 245 595-877 1-247 (250)
337 cd05041 PTKc_Fes_like Catalyti 100.0 2.3E-37 5.1E-42 320.6 23.6 245 595-876 1-247 (251)
338 cd05073 PTKc_Hck Catalytic dom 100.0 4.8E-37 1E-41 321.7 26.2 250 586-876 3-255 (260)
339 PF07714 Pkinase_Tyr: Protein 100.0 1.1E-37 2.4E-42 329.0 20.4 249 592-876 2-257 (259)
340 cd05056 PTKc_FAK Catalytic dom 100.0 3.8E-37 8.3E-42 323.5 24.3 252 588-877 5-261 (270)
341 cd05083 PTKc_Chk Catalytic dom 100.0 2.8E-37 6.1E-42 321.7 23.0 243 587-876 4-249 (254)
342 KOG0194 Protein tyrosine kinas 100.0 8.7E-38 1.9E-42 358.9 20.5 264 578-876 146-415 (474)
343 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.2E-37 4.8E-42 351.5 23.6 260 583-877 31-395 (401)
344 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.7E-37 7.9E-42 327.1 23.6 253 591-877 6-279 (284)
345 cd05042 PTKc_Aatyk Catalytic d 100.0 3.9E-37 8.4E-42 323.3 23.2 247 595-876 1-265 (269)
346 cd05043 PTK_Ryk Pseudokinase d 100.0 5.3E-37 1.1E-41 324.1 24.1 254 587-876 4-271 (280)
347 cd05044 PTKc_c-ros Catalytic d 100.0 2.9E-37 6.2E-42 323.1 21.4 245 596-876 2-265 (269)
348 cd05058 PTKc_Met_Ron Catalytic 100.0 5.1E-37 1.1E-41 320.0 22.6 249 595-877 1-255 (262)
349 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.5E-37 1.6E-41 323.6 24.1 253 589-876 4-278 (284)
350 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.5E-37 3.3E-42 325.6 18.5 237 596-877 2-256 (258)
351 KOG0603 Ribosomal protein S6 k 100.0 3.6E-38 7.8E-43 364.1 14.9 244 587-880 320-566 (612)
352 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9E-37 2E-41 321.1 23.8 247 595-876 1-265 (269)
353 KOG0584 Serine/threonine prote 100.0 5.6E-38 1.2E-42 361.4 14.7 253 592-883 43-302 (632)
354 cd08528 STKc_Nek10 Catalytic d 100.0 1.5E-36 3.3E-41 318.2 23.7 252 590-877 1-266 (269)
355 cd05110 PTKc_HER4 Catalytic do 100.0 1.1E-36 2.4E-41 327.9 22.9 254 587-877 5-264 (303)
356 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 9.6E-37 2.1E-41 316.2 21.4 235 595-876 1-256 (259)
357 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.3E-36 2.9E-41 319.2 22.2 254 589-876 4-278 (284)
358 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.3E-36 2.8E-41 318.8 22.0 252 591-877 1-268 (273)
359 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.9E-36 4.1E-41 319.7 23.3 238 595-877 1-260 (262)
360 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-36 2.9E-41 323.3 21.9 237 596-877 2-272 (274)
361 cd05086 PTKc_Aatyk2 Catalytic 100.0 3E-36 6.4E-41 318.1 23.4 246 596-876 2-264 (268)
362 PHA02882 putative serine/threo 100.0 5E-36 1.1E-40 322.5 23.4 256 589-876 12-291 (294)
363 KOG2345 Serine/threonine prote 100.0 5.2E-37 1.1E-41 323.1 15.2 262 587-877 19-296 (302)
364 KOG1026 Nerve growth factor re 100.0 6.8E-37 1.5E-41 362.3 17.8 252 586-874 483-755 (774)
365 KOG0983 Mitogen-activated prot 100.0 4E-37 8.7E-42 326.9 13.8 260 586-883 89-355 (391)
366 KOG1035 eIF-2alpha kinase GCN2 100.0 4.5E-37 9.7E-42 371.2 15.4 273 588-881 478-875 (1351)
367 KOG0193 Serine/threonine prote 100.0 5.1E-37 1.1E-41 351.9 15.0 258 582-876 385-648 (678)
368 KOG0671 LAMMER dual specificit 100.0 8.4E-37 1.8E-41 336.1 11.5 254 588-883 88-412 (415)
369 smart00220 S_TKc Serine/Threon 100.0 5.2E-35 1.1E-39 295.2 22.1 243 601-880 1-244 (244)
370 KOG0666 Cyclin C-dependent kin 100.0 7.1E-37 1.5E-41 329.3 7.3 263 588-883 23-343 (438)
371 KOG0662 Cyclin-dependent kinas 100.0 2.7E-36 5.8E-41 305.5 11.0 259 589-883 2-289 (292)
372 KOG1187 Serine/threonine prote 100.0 7.9E-35 1.7E-39 327.5 22.2 251 587-875 73-346 (361)
373 KOG1095 Protein tyrosine kinas 100.0 7.2E-35 1.6E-39 354.8 23.3 253 587-876 690-956 (1025)
374 PLN03225 Serine/threonine-prot 100.0 9.3E-35 2E-39 343.8 23.6 262 584-887 127-460 (566)
375 KOG0587 Traf2- and Nck-interac 100.0 4E-35 8.7E-40 346.2 19.7 256 589-882 19-287 (953)
376 KOG1151 Tousled-like protein k 100.0 1.3E-35 2.8E-40 329.0 12.1 265 589-881 463-745 (775)
377 KOG1290 Serine/threonine prote 100.0 1.2E-34 2.5E-39 325.9 19.5 152 567-723 54-222 (590)
378 KOG0670 U4/U6-associated splic 100.0 2.8E-35 6.1E-40 331.6 10.2 264 578-882 420-751 (752)
379 KOG4250 TANK binding protein k 100.0 1.2E-34 2.6E-39 337.3 14.6 243 589-866 13-296 (732)
380 KOG0669 Cyclin T-dependent kin 100.0 6.7E-36 1.4E-40 314.8 1.3 262 589-882 17-320 (376)
381 PLN03224 probable serine/threo 100.0 9.4E-33 2E-37 322.4 24.4 264 585-882 141-505 (507)
382 KOG1006 Mitogen-activated prot 100.0 1.4E-34 3E-39 306.9 6.4 278 567-882 38-332 (361)
383 KOG4278 Protein tyrosine kinas 100.0 8.1E-33 1.8E-37 315.1 19.8 251 582-868 260-513 (1157)
384 KOG0603 Ribosomal protein S6 k 100.0 2E-34 4.4E-39 333.1 6.4 276 596-916 1-284 (612)
385 KOG4257 Focal adhesion tyrosin 100.0 6.1E-33 1.3E-37 317.2 16.9 247 587-868 387-639 (974)
386 KOG0199 ACK and related non-re 100.0 7.2E-33 1.6E-37 319.7 14.8 252 588-875 109-366 (1039)
387 KOG0665 Jun-N-terminal kinase 100.0 5.2E-33 1.1E-37 301.0 11.1 257 587-885 15-316 (369)
388 PLN00113 leucine-rich repeat r 100.0 3.1E-32 6.7E-37 337.6 19.5 240 589-877 690-947 (968)
389 KOG1094 Discoidin domain recep 100.0 1.8E-32 3.9E-37 312.4 15.5 253 589-876 538-799 (807)
390 KOG0668 Casein kinase II, alph 100.0 5.7E-33 1.2E-37 289.7 8.9 253 587-883 36-328 (338)
391 KOG0606 Microtubule-associated 100.0 1.4E-32 3.1E-37 329.6 13.1 270 586-911 80-349 (1205)
392 KOG0664 Nemo-like MAPK-related 100.0 3.3E-33 7.2E-38 296.6 4.2 261 590-885 54-351 (449)
393 KOG0576 Mitogen-activated prot 100.0 7.2E-33 1.6E-37 319.5 7.3 258 588-882 14-276 (829)
394 KOG0196 Tyrosine kinase, EPH ( 100.0 5.5E-32 1.2E-36 316.0 14.3 256 587-877 627-887 (996)
395 KOG1152 Signal transduction se 100.0 3.4E-32 7.3E-37 310.1 11.1 203 587-822 559-771 (772)
396 KOG1027 Serine/threonine prote 100.0 6E-32 1.3E-36 318.3 11.5 246 594-881 514-771 (903)
397 KOG0200 Fibroblast/platelet-de 100.0 2.3E-30 5.1E-35 308.8 22.2 257 583-876 290-574 (609)
398 cd00180 PKc Catalytic domain o 100.0 2.1E-29 4.5E-34 246.4 22.0 212 597-878 1-215 (215)
399 KOG1167 Serine/threonine prote 100.0 9.3E-31 2E-35 291.4 12.7 285 588-883 35-387 (418)
400 smart00221 STYKc Protein kinas 100.0 3.5E-29 7.6E-34 252.2 20.6 214 591-836 1-218 (225)
401 KOG3653 Transforming growth fa 100.0 9.4E-30 2E-34 286.1 13.7 243 587-868 208-493 (534)
402 KOG1025 Epidermal growth facto 100.0 1.4E-29 3.1E-34 296.4 14.3 247 591-874 698-950 (1177)
403 KOG2052 Activin A type IB rece 100.0 3.5E-29 7.6E-34 280.0 16.6 251 586-876 208-498 (513)
404 KOG0984 Mitogen-activated prot 100.0 2.8E-29 6.2E-34 259.3 12.4 216 587-837 44-270 (282)
405 COG0515 SPS1 Serine/threonine 100.0 1.9E-26 4.2E-31 233.8 24.6 260 591-881 2-279 (384)
406 PLN00181 protein SPA1-RELATED; 99.9 1.9E-28 4.1E-33 299.7 11.2 223 649-882 33-270 (793)
407 KOG1345 Serine/threonine kinas 99.9 1.2E-27 2.6E-32 254.9 7.7 239 589-866 24-276 (378)
408 smart00750 KIND kinase non-cat 99.9 5.8E-27 1.2E-31 232.2 10.2 161 674-881 1-169 (176)
409 KOG1024 Receptor-like protein 99.9 3.8E-25 8.1E-30 244.3 14.6 252 589-876 284-550 (563)
410 PRK09188 serine/threonine prot 99.9 2.2E-24 4.8E-29 243.4 18.1 178 584-795 13-195 (365)
411 KOG1164 Casein kinase (serine/ 99.9 1.1E-23 2.5E-28 232.3 21.5 252 590-868 19-287 (322)
412 KOG0590 Checkpoint kinase and 99.9 1.5E-25 3.3E-30 266.8 6.6 262 592-884 321-592 (601)
413 KOG1163 Casein kinase (serine/ 99.9 3.8E-23 8.2E-28 217.9 11.3 276 586-891 12-304 (341)
414 KOG1165 Casein kinase (serine/ 99.9 2.6E-22 5.6E-27 219.0 13.0 250 589-868 28-289 (449)
415 cd05147 RIO1_euk RIO kinase fa 99.9 3.7E-22 7.9E-27 205.9 10.9 141 594-738 2-166 (190)
416 cd05145 RIO1_like RIO kinase f 99.9 4E-21 8.6E-26 196.9 14.7 141 594-738 2-166 (190)
417 PRK10359 lipopolysaccharide co 99.8 4.7E-21 1E-25 204.4 13.8 138 589-737 31-182 (232)
418 KOG1240 Protein kinase contain 99.8 3.6E-22 7.9E-27 240.7 5.2 244 590-877 24-291 (1431)
419 PF14531 Kinase-like: Kinase-l 99.8 1.2E-20 2.7E-25 206.6 16.2 234 590-865 13-288 (288)
420 KOG4158 BRPK/PTEN-induced prot 99.8 1.8E-20 3.8E-25 208.1 11.6 270 585-882 153-518 (598)
421 PRK12274 serine/threonine prot 99.8 1E-19 2.2E-24 191.9 15.1 203 591-824 4-211 (218)
422 PRK10345 hypothetical protein; 99.8 5.8E-19 1.3E-23 185.8 14.9 135 594-737 7-157 (210)
423 smart00090 RIO RIO-like kinase 99.8 1.4E-18 3.1E-23 185.5 12.1 144 590-738 29-197 (237)
424 PRK14879 serine/threonine prot 99.8 5.5E-18 1.2E-22 173.7 13.8 137 595-738 2-143 (211)
425 KOG1166 Mitotic checkpoint ser 99.8 1.2E-18 2.6E-23 213.7 9.8 196 587-818 696-901 (974)
426 KOG0590 Checkpoint kinase and 99.8 1.3E-19 2.8E-24 216.3 1.3 263 588-882 19-291 (601)
427 KOG0195 Integrin-linked kinase 99.7 1.1E-18 2.4E-23 186.6 6.6 242 585-868 186-436 (448)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 1.8E-17 4E-22 168.7 12.7 133 596-738 1-138 (199)
429 cd05144 RIO2_C RIO kinase fami 99.7 2.5E-17 5.4E-22 169.1 11.3 136 591-737 17-173 (198)
430 PRK09605 bifunctional UGMP fam 99.7 9.2E-17 2E-21 189.5 14.9 138 590-738 334-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 1E-16 2.3E-21 161.3 11.3 136 594-737 2-162 (187)
432 KOG1033 eIF-2alpha kinase PEK/ 99.7 2.3E-17 4.9E-22 189.5 4.9 253 589-880 244-515 (516)
433 cd05120 APH_ChoK_like Aminogly 99.6 1.7E-15 3.6E-20 142.8 12.2 132 593-738 2-138 (155)
434 PRK01723 3-deoxy-D-manno-octul 99.6 5.1E-15 1.1E-19 158.3 14.6 137 595-738 37-191 (239)
435 KOG1023 Natriuretic peptide re 99.6 8E-15 1.7E-19 170.4 13.3 197 643-868 1-214 (484)
436 KOG0601 Cyclin-dependent kinas 99.4 6.2E-14 1.3E-18 163.5 6.1 260 590-883 115-385 (524)
437 PRK04750 ubiB putative ubiquin 99.4 2E-13 4.2E-18 161.6 6.2 144 587-738 118-313 (537)
438 TIGR01982 UbiB 2-polyprenylphe 99.4 3.3E-12 7.1E-17 148.2 13.1 138 595-738 123-306 (437)
439 cd05151 ChoK Choline Kinase (C 99.3 3.5E-12 7.5E-17 126.0 9.6 128 594-738 3-136 (170)
440 KOG0601 Cyclin-dependent kinas 99.3 2.4E-12 5.1E-17 150.5 6.8 249 587-880 263-517 (524)
441 cd05146 RIO3_euk RIO kinase fa 99.3 3.5E-11 7.5E-16 126.3 13.4 138 595-737 3-172 (197)
442 KOG1243 Protein kinase [Genera 99.2 8.8E-11 1.9E-15 139.1 15.0 169 607-816 30-199 (690)
443 cd05154 ACAD10_11_like Acyl-Co 99.1 2.4E-10 5.3E-15 116.8 11.0 141 594-738 3-206 (223)
444 KOG1266 Protein kinase [Signal 99.1 8.6E-11 1.9E-15 129.7 7.8 213 640-888 118-342 (458)
445 COG3642 Mn2+-dependent serine/ 99.0 1.1E-09 2.4E-14 113.9 11.7 134 595-738 2-140 (204)
446 KOG3087 Serine/threonine prote 98.9 9.4E-09 2E-13 107.0 12.6 144 593-738 11-165 (229)
447 PF01163 RIO1: RIO1 family; I 98.8 3.9E-08 8.4E-13 102.7 10.8 126 604-737 1-154 (188)
448 PRK15123 lipopolysaccharide co 98.7 1.6E-07 3.4E-12 103.1 15.5 131 605-737 38-193 (268)
449 KOG2137 Protein kinase [Signal 98.7 1.4E-08 3.1E-13 121.1 6.3 168 696-888 106-276 (700)
450 KOG3741 Poly(A) ribonuclease s 98.7 3.1E-07 6.7E-12 107.0 15.1 211 602-877 289-521 (655)
451 KOG0576 Mitogen-activated prot 98.6 5.3E-09 1.1E-13 123.5 -0.9 256 575-882 228-489 (829)
452 PF06293 Kdo: Lipopolysacchari 98.5 4E-07 8.6E-12 95.5 10.9 105 634-738 56-170 (206)
453 COG0478 RIO-like serine/threon 98.4 1.1E-06 2.3E-11 96.5 9.1 137 591-737 93-250 (304)
454 PF01636 APH: Phosphotransfera 98.3 1.1E-05 2.3E-10 82.7 14.3 138 594-738 2-197 (239)
455 PF06176 WaaY: Lipopolysacchar 98.3 8.3E-06 1.8E-10 87.6 13.7 138 589-737 31-182 (229)
456 COG4248 Uncharacterized protei 98.2 6.9E-06 1.5E-10 94.1 12.1 230 594-867 16-289 (637)
457 PRK09902 hypothetical protein; 98.2 1.1E-05 2.3E-10 86.3 12.2 139 598-738 27-179 (216)
458 COG0661 AarF Predicted unusual 98.2 9.2E-06 2E-10 96.7 11.7 139 595-737 131-313 (517)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.1 2.5E-05 5.4E-10 83.6 12.6 134 595-738 7-182 (226)
460 COG1718 RIO1 Serine/threonine 98.0 4.3E-05 9.3E-10 83.3 12.4 138 594-738 53-215 (268)
461 PF13095 FTA2: Kinetochore Sim 98.0 8.9E-05 1.9E-09 78.9 13.1 128 589-736 37-206 (207)
462 cd05150 APH Aminoglycoside 3'- 97.9 0.0001 2.2E-09 78.3 12.2 134 597-738 6-193 (244)
463 PLN02876 acyl-CoA dehydrogenas 97.8 0.00015 3.2E-09 91.1 14.4 145 593-739 42-258 (822)
464 KOG1035 eIF-2alpha kinase GCN2 97.8 6.2E-05 1.3E-09 94.9 9.8 202 633-881 226-438 (1351)
465 KOG1235 Predicted unusual prot 97.8 0.00011 2.5E-09 87.7 11.2 138 595-738 167-354 (538)
466 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00024 5.1E-09 75.6 10.2 73 594-676 2-81 (235)
467 COG2112 Predicted Ser/Thr prot 97.5 0.00048 1E-08 72.2 9.1 130 591-738 24-155 (201)
468 PF10707 YrbL-PhoP_reg: PhoP r 97.4 0.002 4.3E-08 68.4 13.7 131 595-733 7-166 (199)
469 KOG1826 Ras GTPase activating 97.4 9.5E-06 2.1E-10 103.3 -4.4 256 587-881 1227-1496(2724)
470 cd05157 ETNK_euk Ethanolamine 97.3 0.0019 4.1E-08 68.1 11.1 137 594-738 3-201 (235)
471 PRK09550 mtnK methylthioribose 97.2 0.0067 1.4E-07 70.8 15.3 80 594-675 31-117 (401)
472 PF12260 PIP49_C: Protein-kina 97.2 0.0013 2.8E-08 69.0 8.3 97 637-737 7-110 (188)
473 PRK10593 hypothetical protein; 97.2 0.0046 1E-07 68.9 13.1 77 593-676 18-100 (297)
474 TIGR02721 ycfN_thiK thiamine k 97.1 0.0015 3.2E-08 70.4 7.8 132 597-738 4-175 (256)
475 TIGR00938 thrB_alt homoserine 97.0 0.0061 1.3E-07 67.6 12.5 141 591-738 24-217 (307)
476 cd05156 ChoK_euk Choline Kinas 97.0 0.004 8.7E-08 68.4 10.3 76 594-677 3-85 (302)
477 PRK05231 homoserine kinase; Pr 96.9 0.016 3.6E-07 64.1 14.7 31 708-738 187-217 (319)
478 cd05153 HomoserineK_II Homoser 96.9 0.01 2.2E-07 64.8 12.4 138 593-738 18-205 (296)
479 KOG2268 Serine/threonine prote 96.5 0.0022 4.8E-08 72.7 3.7 136 591-737 94-250 (465)
480 KOG2270 Serine/threonine prote 96.2 0.029 6.3E-07 64.8 10.6 141 593-737 148-312 (520)
481 TIGR02906 spore_CotS spore coa 96.0 0.1 2.2E-06 57.3 13.6 30 708-738 187-216 (313)
482 COG3173 Predicted aminoglycosi 96.0 0.057 1.2E-06 61.4 11.8 145 591-739 27-229 (321)
483 TIGR01767 MTRK 5-methylthiorib 95.9 0.04 8.7E-07 63.7 10.4 76 596-673 2-84 (370)
484 PLN02236 choline kinase 95.8 0.058 1.3E-06 61.5 10.9 138 593-738 40-231 (344)
485 cd05152 MPH2' Macrolide 2'-Pho 95.7 0.075 1.6E-06 58.9 11.0 30 709-738 186-216 (276)
486 PLN02756 S-methyl-5-thioribose 95.1 0.19 4.1E-06 59.1 12.3 77 593-673 36-119 (418)
487 PLN02421 phosphotransferase, a 94.9 0.11 2.5E-06 58.7 9.7 139 590-737 16-212 (330)
488 KOG1093 Predicted protein kina 94.2 0.068 1.5E-06 63.9 5.8 162 635-883 28-200 (725)
489 PRK12396 5-methylribose kinase 94.2 0.25 5.4E-06 58.0 10.2 78 594-673 34-117 (409)
490 PTZ00384 choline kinase; Provi 93.9 0.36 7.7E-06 56.3 10.9 29 708-737 227-255 (383)
491 TIGR02904 spore_ysxE spore coa 93.8 0.58 1.3E-05 52.2 12.0 30 709-738 197-226 (309)
492 PF03881 Fructosamin_kin: Fruc 93.1 1 2.3E-05 50.6 12.5 76 591-674 19-97 (288)
493 PRK06148 hypothetical protein; 93.0 1.6 3.4E-05 57.0 15.6 30 708-737 203-235 (1013)
494 PRK11768 serine/threonine prot 92.7 1.6 3.4E-05 49.5 13.4 29 708-738 196-224 (325)
495 COG5072 ALK1 Serine/threonine 91.9 0.3 6.5E-06 56.8 6.4 72 661-738 298-370 (488)
496 PF02958 EcKinase: Ecdysteroid 90.6 1.5 3.2E-05 48.2 10.0 29 710-738 217-250 (294)
497 PF07387 Seadorna_VP7: Seadorn 89.9 1.3 2.8E-05 48.8 8.5 85 634-735 103-189 (308)
498 smart00133 S_TK_X Extension to 88.7 0.54 1.2E-05 40.1 3.8 31 881-911 1-33 (64)
499 PTZ00296 choline kinase; Provi 87.8 4.6 9.9E-05 48.2 12.0 28 709-737 285-312 (442)
500 KOG1033 eIF-2alpha kinase PEK/ 85.3 0.19 4E-06 60.1 -1.2 73 587-661 47-119 (516)
No 1
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.9e-70 Score=652.45 Aligned_cols=924 Identities=39% Similarity=0.502 Sum_probs=712.8
Q ss_pred hhhhhhhhhhhhhhhhhccc-----hhhhhhhHHHHhhhccccCchhhHHHHHHHHHHhhhcccCCcceeeeehhhhhhh
Q 001857 19 EILVVIRTKFDKAKEEVNSD-----LAVFAGDLVGILEKNAESHPEWQETIEDLLVLARSCAMTSPGEFWLQCEGIVQEL 93 (1003)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (1003)
+.++.|+++|...++=+..| +++|++|.|-..|+.-+.-+|-|+.|++||+.+..|..+.+|+||+-|++|+|-|
T Consensus 242 wamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 242 WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred HHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence 88999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hhh---cccCCcchHHHHHHHHHHHHHhhHHHhhhhcccccccccccccccccccccccccCCCCcc---ccCCCcchHh
Q 001857 94 DDR---RQELPPGTLKQLYTRMLFILTRCTRLLQFHKESALAEDEHMFQFRQSRVLHSADKRIPQGT---LRDGKGSTIA 167 (1003)
Q Consensus 94 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 167 (1003)
|.- ||+++-+.+++.+.+|+||+|||+|.-||.+|-- ...|+...|||-- +.--|+++.. .+=-.-++.+
T Consensus 322 Dw~~llRqkaefvpql~~eddtsyfdTRs~Ryh~~~se~~-~~ees~~~~~qFs---scs~r~~kv~ss~~~l~~~~t~~ 397 (1205)
T KOG0606|consen 322 DWKSLLRQKAEFVPQLESEDDTSYFDTRSDRYHHFESEDT-GDEESSLEFRQFS---SCSPRFSKVYSSWESLAQLETAT 397 (1205)
T ss_pred ccchhhhhhccccccccccccchhhcccchheeeccccCC-ccccccccccccc---cccccccccccchhhhhcccccc
Confidence 999 9999999999999999999999999999999983 3344545677632 1112222111 1100011222
Q ss_pred hhhhhhcccccc---hhhhhcc--CccccccccCCcccCCCCCCCcccccchhhhhcccccccCCCCcccccccCCCccc
Q 001857 168 KASKAASSRKSY---SQEQHGL--DWKRDHAVKQGNILSPPGDDNAKSLESSAARDRMSSWKKLPSPVGKIMKESPTSKE 242 (1003)
Q Consensus 168 ~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (1003)
.+.+ +.-++| ++--.+. +|++.- +.+..+-.+. +.+.-++. ++++.|+.++++--+.-+...+.+-
T Consensus 398 ~~~~--~~~~~~~~~~~~~~g~k~~~~~~s----p~~~kl~~st-~~ss~s~~--~~~s~~~~~~~~~s~~~~~~~~s~~ 468 (1205)
T KOG0606|consen 398 PREK--SSQSSQGEVSPSSAGQKDSWKSNS----PESSKLELST-ALSSVSPN--HPGSPSKSLTSAASTLRTALRTSSP 468 (1205)
T ss_pred cccc--ccccccccccCCccccccccccCC----hhhhhccccc-hhhhcccc--cCCCccccccchhhhhccccccCCC
Confidence 2222 222222 2211111 355432 2222222222 22222222 7999999999999999999999999
Q ss_pred cCCCccccccccccccCCcccccccCCCCCCchhhhhhccc---cccCcccccccCCCCccCCCCcceeeecccccCCCc
Q 001857 243 QNDGKVEPLKSSNIRRGLSEIDLTAKPSEFPPAAETLEHSS---KHQHKVSWGYWGDQQNISDDSSSIICRICEEEVPTS 319 (1003)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1003)
++|+++.|+..---+ --.++-..+-|+.+...+-++ .--+.--|+.|++-+-+.-. .+.||||||.++|+.
T Consensus 469 ~~ds~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~~s~~~~d~s~~~~~~r~~~~~v~~~-d~~i~~~~e~~~p~~ 542 (1205)
T KOG0606|consen 469 SEDSKIFPLRAPPPP-----SSYASEEPESPKPKFSVSPESGQPGDDSEALDRSRLWSKCVGTS-DSGICRICEAEGPRL 542 (1205)
T ss_pred CCCccccccCCCCCc-----cccccCCCCCCCcccccCCCCCCcccchhhhccccccccccccC-Ccccccccccccccc
Confidence 999999998633222 122233333333333221111 11223449999888877665 788999999999999
Q ss_pred ccccccchhhhhccccccCCccchhHHHHHHHHHHHHHHhhhcc-ccccccCCcccccccCCcccccccCCCCccccccc
Q 001857 320 HVEDHSKICAIADRCDQKGLSVNERLLRISETLEKMMESSVQKD-IHNVVVGSPDVAKVSNSSVTEESDVLSPKFSDWSR 398 (1003)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (1003)
|.|.|++||.++++|+-++++++.|+.+|.+-+++...|..-+- ... -|+|.-.-.|+.+ .-|+..| +-+.|+|
T Consensus 543 ~~e~~~~~~~~~~ks~~~s~e~~~~~~kv~ks~s~~alS~~i~s~~~~--~~~~l~s~lS~~~--~sS~p~S-rdsspsr 617 (1205)
T KOG0606|consen 543 HSENHSRICKHQAKSELNSIEVKSRLRKVNKSLSASALSLMINSSDTP--TGGPLCSPLSPRS--LSSNPSS-RDSSPSR 617 (1205)
T ss_pred cccCcchHHHhhhhcccCccccccchhhHHHHHHhhhcccccccccCC--cccccccccCCCC--CCCCccc-Ccccccc
Confidence 99999999999999999999999999999999999988865433 222 2455555555433 3455556 9999999
Q ss_pred cCccccccccccCCCcccccccCCCCCcccccccCCCCCCCCccCCCCCCCCCCCCCCCcchhHHHHHhccCCCCCCCCc
Q 001857 399 RGSEDMLDYVPEADNSVFMDDLKGLPSMACKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLAGKGALSEHDDF 478 (1003)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1003)
++|+.|+++.|.-+..-.-+.+. +-.|+-+.-.|-++ .-..-++.++.++-||+-+|+.+|-|++.-+++-..+--+.
T Consensus 618 d~s~~~~~~~ppI~i~~~~~~yG-ft~~airVy~Gd~d-~ytvhh~v~sv~egsPA~~agls~~DlIthvnge~v~gl~H 695 (1205)
T KOG0606|consen 618 DSSAAMLSLRPPITIHFSGKKYG-FTLRAIRVYMGDKD-VYTVHHSVGSVEEGSPAFEAGLSAGDLITHVNGEPVHGLVH 695 (1205)
T ss_pred ccchhhcCcCCceeeeccccccC-ceeeeEEEecCCcc-cceeeeeeeeecCCCCccccCCCccceeEeccCcccchhhH
Confidence 99999999999777665555544 66777777778887 55556889999999999999999999999999999999999
Q ss_pred cchhhHHH--Hhhh-cCCCCCCCCCCcchhhhhhccceEEEecCCcccchhHhHH-HHHHHHHHHHHHHhhhhccCCCCc
Q 001857 479 PQMNELAD--IARC-VATTPLDDDSSIPYLLSFLEDLRVVIDRRKFDALTVETFG-ARIEKLIREKYLQLCELVTDDKVD 554 (1003)
Q Consensus 479 ~~~~~~~~--~~~~-~~~~p~~~~~~~~~~l~~~~~~r~~~d~rk~~sit~e~~g-~ri~~l~R~ky~~Lcelv~~d~ld 554 (1003)
+||++|+. ++++ +.++|+.. .++-+.-.-..+.+-++.+|+-.++..+.++ +++.+++|..|.+.|+++..+...
T Consensus 696 ~ev~~Lll~~gn~v~~~ttplen-TSik~g~arr~~~k~~m~~R~kk~~~~E~~~~rr~~kLlr~~~~q~~~l~~~~~s~ 774 (1205)
T KOG0606|consen 696 TEVMELLLKSGNKVTLRTTPLEN-TSIKSGPARRDSYKAVMARRKKKALVPETFGIRRIEKLLRKISKQDCELLHTSRSF 774 (1205)
T ss_pred HHHHHHHHhcCCeeEEEeecccc-chhhhhHHHHHHHHHHHhhcccccccccccccccHHHHHHHHHhhhhhhhcccccc
Confidence 99999887 7754 45667643 3444444444466667778999999999999 899999999999999988765543
Q ss_pred ccceeecCCCCCchhhhcccCCCCCCCCCCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHH
Q 001857 555 ITSTVIEEDAPLEDDVVRSLRTSPIHPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVE 634 (1003)
Q Consensus 555 itS~~Iee~~~lEee~l~sl~~s~~~Psk~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie 634 (1003)
.. ....+..+..+.+...+..|.+.+...+++.+++.+-.|+|+.++.+.-..+|...+.|+..+.........+
T Consensus 775 ~s-----s~eS~pgdp~~sls~sP~sp~~yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~ 849 (1205)
T KOG0606|consen 775 LS-----SSESLPGDPTRSLSASPRSPTKYRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYE 849 (1205)
T ss_pred cc-----ccccCCCCcccccccCCCCcccccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhcccccc
Confidence 11 2222233445666666777777778899999999999999999999999889989999998887777777777
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceecc
Q 001857 635 SILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRD 714 (1003)
Q Consensus 635 ~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRD 714 (1003)
....+..++....||.++..+..|......+|+|+|+.|++|...+++.++.+++-++.++..+..+++|||...++|||
T Consensus 850 s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~ 929 (1205)
T KOG0606|consen 850 SIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRD 929 (1205)
T ss_pred ccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhccc
Confidence 78888888877888999999888888899999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeecCCCcEEEeecC-CccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc
Q 001857 715 LKPDNLLIAHDGHIKLTDFG-LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL 793 (1003)
Q Consensus 715 IKPeNILLd~dG~VKLiDFG-LAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~ 793 (1003)
++|.|+|+..+|+.+++||| +.+.+......+.+++.-.++...-........... ..........||+.|.|||.+.
T Consensus 930 ~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~t~~~laPe~~l 1008 (1205)
T KOG0606|consen 930 LKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSA-DEARRKHAVVGTPDYLAPEILL 1008 (1205)
T ss_pred ccccchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccccccccc-chhhccccccCCCcccCCcccc
Confidence 99999999999999999999 666666666666554433333221111111111111 1234456789999999999999
Q ss_pred cCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHH
Q 001857 794 GTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1003)
Q Consensus 794 g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeE 873 (1003)
+..++..+|||++|++++|.++|.+||....++.++++|.+...+||..+...+.++++++.++|..+|.+|.+...+.+
T Consensus 1009 g~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e 1088 (1205)
T KOG0606|consen 1009 GRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAE 1088 (1205)
T ss_pred cccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777789
Q ss_pred HHcCCCCCCCChhHHhhhcCCccCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCcccccCCCCCCCCccchhhhhcc
Q 001857 874 VKQHVFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNTTDENIYPASDFEDSSDADSLSGSSSCLSNRQEEVGDE 953 (1003)
Q Consensus 874 LLqHPFFk~Idwd~L~~~k~pfvP~~~s~lDts~F~s~~s~~~tdeni~p~s~~e~~~~~~~~sgs~~~~s~~q~e~~~~ 953 (1003)
+..|+||+.++|+.+..++..|+|.+.+..|++||.++|.|...+++..-...+.. -.++..+..|..+ +.-...
T Consensus 1089 ~k~~~~~~~~~~~~l~~q~~~~~p~~~s~~dtS~~~~r~~~~~~~e~~sg~s~~~~---~~s~~~~~~~~~p--e~~~~~ 1163 (1205)
T KOG0606|consen 1089 VKGHPFFQDVDWENLALQKAEFVPQPESTQDTSYFESRFSEESQDETVSGSSSGSK---LDSPDESPECTTP--ELKPAM 1163 (1205)
T ss_pred cccCCccCCCCccccccccCccCCCCCCCCccchhhcccccccccccccCCCcccC---ccCccccccccCc--cccCCc
Confidence 99999999999999999999999999999999999999998876655433322211 1111112222211 111223
Q ss_pred cCCCccccCCCccceeeecccccCcccccchhhhcccC
Q 001857 954 CGGLAEFESGSSVNYSFSNFSFKNLSQLASINYDLLSK 991 (1003)
Q Consensus 954 ~~~l~~~~~~~~v~~~f~~f~~~~~~~~~~~~~~~~~~ 991 (1003)
|+ +..|.+|+|.+.++++|+||+.+-+
T Consensus 1164 ~~-----------~~sl~~~~~k~~s~l~s~~p~~~l~ 1190 (1205)
T KOG0606|consen 1164 CG-----------NLSLINFSFKNLSQLASINPDKLLQ 1190 (1205)
T ss_pred Cc-----------cccccccCccChhhccccChHhhcC
Confidence 33 3449999999999999999998866
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.3e-68 Score=599.05 Aligned_cols=379 Identities=45% Similarity=0.752 Sum_probs=304.1
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
.+..+++|++++.||+|+||.||+|+.+.||.+||||+++|+.+...+++++++.|.++|...++|+||+||++|++.++
T Consensus 136 ~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~ 215 (550)
T KOG0605|consen 136 TRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEY 215 (550)
T ss_pred ccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCe
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+||||||++||++..+|.+.+.|+++.+++|+++++.|++.||+.|||||||||+|+|||..||+||+|||||+-.....
T Consensus 216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996322111
Q ss_pred CCCC------CCCCccCcccCCCC----Cccch--h-----hhhhhhhhccccccCCCCCCCchhhccCCCCccceeech
Q 001857 744 TDDL------SGPAVSGTTLLGDE----EPQLT--A-----SEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSV 806 (1003)
Q Consensus 744 ~ddl------s~p~~s~ttl~g~~----~~~lt--~-----~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSL 806 (1003)
..+. ........ ...+. .+..+ . ...........+.+|||.|||||++.+.+|+..||||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEA-KPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhcchhhhhhhhccC-CCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 1110 00000000 00000 00111 0 011122334467899999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCCChhhHHHhhhccC--CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 807 GIILFELIVGIPPFNAEHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 807 GVILYELLTGk~PF~~~~~~ei~qkIl~~~--~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
||||||||.|.+||.+.++.+++++|++.. ..+|. ...++++++|||.+||+ ||.+|+|.++++||++||||++|+
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~-~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE-EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC-cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 999999999999999999999999999876 44443 24688999999999999 999999988999999999999999
Q ss_pred hhHHhhhcCCccCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCcccccCCCCCCCCccchhhhhcccCCCccccCCC
Q 001857 885 WDTLARQKAAFVPTSESALDTSYFTSRYSWNTTDENIYPASDFEDSSDADSLSGSSSCLSNRQEEVGDECGGLAEFESGS 964 (1003)
Q Consensus 885 wd~L~~~k~pfvP~~~s~lDts~F~s~~s~~~tdeni~p~s~~e~~~~~~~~sgs~~~~s~~q~e~~~~~~~l~~~~~~~ 964 (1003)
|+.+....+||+|...+.+|++||+.- ++++... .....+..+..+.......+.-.+..
T Consensus 453 W~~l~~~~apfvP~v~~~~DT~yFddF-----~e~~~~~---------------~~~~~~~~~~k~~~~~~~~~~~~~~~ 512 (550)
T KOG0605|consen 453 WDHLREMPAPFVPQVNSELDTQYFDDF-----PEEDSMT---------------PTADKSGPSRKMLSMVDTNNSSKDIN 512 (550)
T ss_pred cchhhcCCCCCCCCCCCcccccccccC-----cccccCc---------------ccccccccchhhhhcccccCCccccc
Confidence 999999999999999999999999731 1111000 01111111111111111112334456
Q ss_pred ccceeeecccccCcccccchh
Q 001857 965 SVNYSFSNFSFKNLSQLASIN 985 (1003)
Q Consensus 965 ~v~~~f~~f~~~~~~~~~~~~ 985 (1003)
++||+|++|++.+..+...++
T Consensus 513 FvgfTyk~~~~~~~~~~~~~~ 533 (550)
T KOG0605|consen 513 FVGFTYKNFDGLNKANSLLIN 533 (550)
T ss_pred ccceeeecccccccccccccc
Confidence 899999999999888776544
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-64 Score=555.00 Aligned_cols=301 Identities=49% Similarity=0.894 Sum_probs=279.2
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
....++|+++++||+|+||+||+++.+.|++.||||+++|..+......+++.+|+.||..++||+||+++..|++.+++
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 35578999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|||+||+.||+|+.+|++.+.++|..+++|+++|+.||.|||++|||||||||+||||+.+||++|+|||||+....
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~--- 177 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK--- 177 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999995211
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
....+.++|||+.|||||++.+.+|+.++||||||+++|||++|.+||.+.+
T Consensus 178 ----------------------------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~ 229 (357)
T KOG0598|consen 178 ----------------------------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED 229 (357)
T ss_pred ----------------------------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence 1123456999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC-CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSES 901 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~-~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s 901 (1003)
...++++|...+.. ..|..++.++++||+++|++||++|+|. +++.+|.+||||+++||+.+... .|||.|....
T Consensus 230 ~~~~~~~I~~~k~~--~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~ 307 (357)
T KOG0598|consen 230 VKKMYDKILKGKLP--LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTG 307 (357)
T ss_pred HHHHHHHHhcCcCC--CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCC
Confidence 99999999988743 3456799999999999999999999974 68999999999999999999876 4899999999
Q ss_pred CCCCCCcccccccCCCC
Q 001857 902 ALDTSYFTSRYSWNTTD 918 (1003)
Q Consensus 902 ~lDts~F~s~~s~~~td 918 (1003)
..++++|+.++...+.+
T Consensus 308 ~~~~~~Fd~eft~~~~~ 324 (357)
T KOG0598|consen 308 LEDTSNFDNEFTSYTVD 324 (357)
T ss_pred ccccccccHHHHhcccc
Confidence 99999999988766554
No 4
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-61 Score=515.78 Aligned_cols=288 Identities=41% Similarity=0.841 Sum_probs=271.2
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
..+++|++++.||.|+||+|.+++.+.+|..||+|++.+..+.+..++++..+|..+|+.+.||+++++++.|.+..++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 57799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|||||++||.|+.++++.+++++..+++|++||+.||+|||+++||+|||||+|||||.+|++||+|||+|+..
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v------ 194 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRV------ 194 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEe------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999841
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
...+.+.||||.|+|||++..++|+.++|||||||++|||+.|.+||.+.++
T Consensus 195 ----------------------------~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 195 ----------------------------SGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred ----------------------------cCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 1235678999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccC-CCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVP-TSE 900 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP-~~~ 900 (1003)
..++++|+.++..|| ..++.+++|||+++|+.|-.+|.|. ++..+|+.||||++++|..+..+ ++|++| ...
T Consensus 247 ~~iY~KI~~~~v~fP---~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~ 323 (355)
T KOG0616|consen 247 IQIYEKILEGKVKFP---SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIH 323 (355)
T ss_pred HHHHHHHHhCcccCC---cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCCcccc
Confidence 999999999998765 5799999999999999999999886 47899999999999999999877 478887 666
Q ss_pred CCCCCCCccc
Q 001857 901 SALDTSYFTS 910 (1003)
Q Consensus 901 s~lDts~F~s 910 (1003)
...|+++|+.
T Consensus 324 ~~gdtsnfd~ 333 (355)
T KOG0616|consen 324 GPGDTSNFDD 333 (355)
T ss_pred CCcccccccc
Confidence 6788888865
No 5
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-60 Score=547.68 Aligned_cols=295 Identities=40% Similarity=0.794 Sum_probs=273.0
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRE 662 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~ 662 (1003)
....+++|.++++||+|+||+|++|+.+.++++||||+++|..+...+.++..+.|..|+...+ ||++++|+.+|++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 3677899999999999999999999999999999999999999999999999999999998875 999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
++|+||||+.||++. ++...+.|++..+++|+++|+.||+|||++||||||||.+|||||.+||+||+|||+++.++..
T Consensus 443 ~l~fvmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred eEEEEEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC
Confidence 999999999999944 3444578999999999999999999999999999999999999999999999999999953211
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
+..+.++||||.|||||++.+..|+.++|||||||+|||||.|..||.+
T Consensus 522 -------------------------------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 522 -------------------------------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred -------------------------------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1245689999999999999999999999999999999999999999999
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCC
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~ 898 (1003)
.+.++++..|++..+. +|..+|.++.++++++|+++|++|+|+ .++++|++||||++|+|+.|..+ +|||+|.
T Consensus 571 ddEee~FdsI~~d~~~---yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEVR---YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred CCHHHHHHHHhcCCCC---CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcc
Confidence 9999999999998765 457899999999999999999999997 57999999999999999999876 5999999
Q ss_pred CCCCCCCCCcccccc
Q 001857 899 SESALDTSYFTSRYS 913 (1003)
Q Consensus 899 ~~s~lDts~F~s~~s 913 (1003)
..+..|.++|+..|+
T Consensus 648 i~~~~D~snFd~eFt 662 (694)
T KOG0694|consen 648 IKGPEDVSNFDEEFT 662 (694)
T ss_pred cCChhhhcccchhhh
Confidence 999999999988764
No 6
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-57 Score=511.58 Aligned_cols=286 Identities=37% Similarity=0.735 Sum_probs=258.2
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccce
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~ 663 (1003)
.....||.+.+.||.|+|++|++|+.+.+++.|||||+.|..+.+++.++.+..|..+|..| .||.|++||..|++...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 45678999999999999999999999999999999999999999998899999999999999 89999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+|+|+||+++|+|.++|++.|.|++..+++|++||+.||+|||++|||||||||+||||+.+|++||+|||.|+......
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999632111
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
.. ...+. ..........+++||..|.+||+|.....++.+|||+||||||+|+.|.+||.+.
T Consensus 229 ~~-~~~~~-----------------~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~ 290 (604)
T KOG0592|consen 229 KS-QENPV-----------------DPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA 290 (604)
T ss_pred cc-ccCcc-----------------CcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence 10 00000 0001112246799999999999999999999999999999999999999999999
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCC
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAA 894 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~p 894 (1003)
+.--++++|+...+.|| +++++.++|||+++|..||.+|+ |+++|++||||.+|+|+.+..+.||
T Consensus 291 NeyliFqkI~~l~y~fp---~~fp~~a~dLv~KLLv~dp~~Rl---t~~qIk~HpFF~~Vdw~nlw~~~PP 355 (604)
T KOG0592|consen 291 NEYLIFQKIQALDYEFP---EGFPEDARDLIKKLLVRDPSDRL---TSQQIKAHPFFEGVDWENLWQQTPP 355 (604)
T ss_pred cHHHHHHHHHHhcccCC---CCCCHHHHHHHHHHHccCccccc---cHHHHhhCcccccCChhhhhhcCCC
Confidence 99999999999988765 68999999999999999999999 8999999999999999999888754
No 7
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-57 Score=499.88 Aligned_cols=317 Identities=38% Similarity=0.686 Sum_probs=270.2
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
...++.|++++.||.|.-|+||+|+.+.++..+|||++.|..+..++...++..|.+||..++||+++.||..|+.+...
T Consensus 73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~ 152 (459)
T KOG0610|consen 73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS 152 (459)
T ss_pred ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence 45567899999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 665 YLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
|||||||+||+|..+++++ +.|+++.+++|+++++.||+|||-.|||+|||||+||||.++|||.|+||.|+......
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999999876 57999999999999999999999999999999999999999999999999998753211
Q ss_pred CCCCCC-C-------CCccC--------cccCCCCC---------ccchhhhhhhhhhccccccCCCCCCCchhhccCCC
Q 001857 743 STDDLS-G-------PAVSG--------TTLLGDEE---------PQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH 797 (1003)
Q Consensus 743 ~~ddls-~-------p~~s~--------ttl~g~~~---------~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y 797 (1003)
.+-..+ . +...+ ........ ...+.....-...+..+++||-+|+|||++.|.++
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 110000 0 00000 00000000 00000111122346678999999999999999999
Q ss_pred CccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC-CCHHHHHc
Q 001857 798 GTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQ 876 (1003)
Q Consensus 798 s~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~-~TAeELLq 876 (1003)
+.++|||+||+++||||.|..||.+.+..+++.+|+.....||..+ .++..++|||+++|.+||.+|+|+ .+|.||++
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 9999999999999999999999999999999999999999998766 789999999999999999999987 57999999
Q ss_pred CCCCCCCChhHHhhhcCCccCCCCCC
Q 001857 877 HVFFKDINWDTLARQKAAFVPTSESA 902 (1003)
Q Consensus 877 HPFFk~Idwd~L~~~k~pfvP~~~s~ 902 (1003)
||||++++|..++..+||++|.....
T Consensus 392 HpFF~gVnWaLir~~~PP~iP~~~d~ 417 (459)
T KOG0610|consen 392 HPFFEGVNWALIRCARPPEIPKPVDG 417 (459)
T ss_pred CccccCCChhheeccCCCcCCCcccc
Confidence 99999999997778899999987543
No 8
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-57 Score=506.39 Aligned_cols=360 Identities=34% Similarity=0.593 Sum_probs=309.3
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
..+.|+..++||+||||.||.|+.+.||+.||+|.+.|.++..+......++|..||..++.++||.+-++|++++.+||
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 34669999999999999999999999999999999999988888888899999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||..|+||+|..+|.+.+ .|++..+++|++||+.||++||+.+||+|||||+|||+|+.|||+|+|+|||....
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~---- 338 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP---- 338 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC----
Confidence 999999999999998876 79999999999999999999999999999999999999999999999999997311
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
.....+..+||.+|||||++.+..|+...|||||||+||||+.|+.||....
T Consensus 339 ----------------------------~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K 390 (591)
T KOG0986|consen 339 ----------------------------EGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK 390 (591)
T ss_pred ----------------------------CCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh
Confidence 1122345699999999999999999999999999999999999999997543
Q ss_pred ----hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCcc
Q 001857 825 ----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFV 896 (1003)
Q Consensus 825 ----~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfv 896 (1003)
.+++-++++.... .+++.+|+++++|++.+|++||.+|+|+ +++.++.+||||+++||..+... .|||+
T Consensus 391 eKvk~eEvdrr~~~~~~---ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfi 467 (591)
T KOG0986|consen 391 EKVKREEVDRRTLEDPE---EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFI 467 (591)
T ss_pred hhhhHHHHHHHHhcchh---hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCC
Confidence 3455556655544 3567899999999999999999999998 68999999999999999999887 59999
Q ss_pred CCCCC-----CCCCCCccc--ccccCCCCCCCCCCCCCCCCcccccCCCCCCCCc-cchhhhhc-ccCC-CccccCCCcc
Q 001857 897 PTSES-----ALDTSYFTS--RYSWNTTDENIYPASDFEDSSDADSLSGSSSCLS-NRQEEVGD-ECGG-LAEFESGSSV 966 (1003)
Q Consensus 897 P~~~s-----~lDts~F~s--~~s~~~tdeni~p~s~~e~~~~~~~~sgs~~~~s-~~q~e~~~-~~~~-l~~~~~~~~v 966 (1003)
|.+.. .+|..+|+. .+.++.+|+++|..+ +++|+| +||+||++ +|+. +|.|.+.++.
T Consensus 468 Pdp~aVyakDv~DIeqFs~VKGV~ld~~D~~fy~~F-------------~tg~vsipWQnE~~ET~~f~elnv~~~~~~~ 534 (591)
T KOG0986|consen 468 PDPGAVYAKDVLDIEQFSTVKGVKLDDTDTDFYKNF-------------ATGSVSIPWQNEMIETECFEELNVFGDDGAK 534 (591)
T ss_pred CCccccchhhhhhhhhcccccceecccccHHHHHhc-------------cCCcccchHHHHHHHhhhHHHhhcccccccc
Confidence 98754 588899986 567888899898888 567777 89999998 6888 9999888866
Q ss_pred ceeeecccccCcccccchhhhcccCCCCC
Q 001857 967 NYSFSNFSFKNLSQLASINYDLLSKGWKD 995 (1003)
Q Consensus 967 ~~~f~~f~~~~~~~~~~~~~~~~~~~~~~ 995 (1003)
+=.-. .-|.|..-...-.-+|++.+.+.
T Consensus 535 ~~d~~-~~~p~~~~~~~~~~~l~~~~~~~ 562 (591)
T KOG0986|consen 535 NPDLR-YLFPNRLEKRGEGPRLFTMKNIS 562 (591)
T ss_pred Ccchh-cccCCccccCCCCcccccccccc
Confidence 54433 44555544444444555555443
No 9
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-57 Score=483.40 Aligned_cols=303 Identities=40% Similarity=0.773 Sum_probs=282.3
Q ss_pred CCCCCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeee
Q 001857 580 HPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFT 659 (1003)
Q Consensus 580 ~Psk~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~ 659 (1003)
.+.+....+++|..+++||+|.||+|-+|+.+.+++.||||+++|.-+..++.+.+.+.|-++|+..+||++..|.+.|+
T Consensus 159 ~~~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ 238 (516)
T KOG0690|consen 159 AKRKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ 238 (516)
T ss_pred ccccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc
Confidence 34456778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccc
Q 001857 660 CRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1003)
Q Consensus 660 d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1003)
..+++|+||||.+||.|+.++.+...+++..+++|-++|+.||.|||+++||+||||.+|+|+|.+|||||+||||++.+
T Consensus 239 t~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 239 TQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred cCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999953
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~P 819 (1003)
.. -+....++||||.|+|||++....|+.++|||.+||+||||++|+.|
T Consensus 319 I~-------------------------------~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLP 367 (516)
T KOG0690|consen 319 IK-------------------------------YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLP 367 (516)
T ss_pred cc-------------------------------ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCc
Confidence 21 12345689999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhhc--CCc
Q 001857 820 FNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK--AAF 895 (1003)
Q Consensus 820 F~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~k--~pf 895 (1003)
|+..+...+++-|+.....|| ..++++++.|+..+|.+||.+|+|. ..|.||.+|+||.+++|+...+.+ |||
T Consensus 368 Fyn~dh~kLFeLIl~ed~kFP---r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPf 444 (516)
T KOG0690|consen 368 FYNKDHEKLFELILMEDLKFP---RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPF 444 (516)
T ss_pred ccccchhHHHHHHHhhhccCC---ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCC
Confidence 999999999999999887665 6899999999999999999999997 479999999999999999988764 899
Q ss_pred cCCCCCCCCCCCcccccccCC
Q 001857 896 VPTSESALDTSYFTSRYSWNT 916 (1003)
Q Consensus 896 vP~~~s~lDts~F~s~~s~~~ 916 (1003)
.|...+..|++||+.+|+..+
T Consensus 445 KPqVtSetDTryFD~EFT~q~ 465 (516)
T KOG0690|consen 445 KPQVTSETDTRYFDEEFTSQP 465 (516)
T ss_pred CCCcccccchhhhhhhhhcce
Confidence 999999999999998876444
No 10
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-57 Score=536.92 Aligned_cols=294 Identities=41% Similarity=0.759 Sum_probs=269.1
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
+...+||+++++||+|+||.|.+++++.+++.||||++.|-.+..+.....|..|.++|...+.++|++++++|++.+++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 44568999999999999999999999999999999999998888777788999999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||||||++||+|..++.+.+.+|+..++||+++|+.||+-||+.|+|||||||+|||||..|||||+|||.|.....+
T Consensus 151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d-- 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD-- 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988631100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~kSDIWSLGVILYELLTGk~P 819 (1003)
..-.....+|||.|++||++.. ..|+..||||||||++||||.|..|
T Consensus 229 ----------------------------G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TP 280 (1317)
T KOG0612|consen 229 ----------------------------GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETP 280 (1317)
T ss_pred ----------------------------CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCc
Confidence 0123456899999999999963 4589999999999999999999999
Q ss_pred CCCCChhhHHHhhhcc--CCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccC
Q 001857 820 FNAEHPQQIFDNILNR--KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVP 897 (1003)
Q Consensus 820 F~~~~~~ei~qkIl~~--~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP 897 (1003)
|+..+..++|.+|++. ...||.. ..+|.++++||.++|+ +|..|+|.++++++.+||||.+++|+.++...|||+|
T Consensus 281 FYadslveTY~KIm~hk~~l~FP~~-~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vP 358 (1317)
T KOG0612|consen 281 FYADSLVETYGKIMNHKESLSFPDE-TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVP 358 (1317)
T ss_pred chHHHHHHHHHHHhchhhhcCCCcc-cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCC
Confidence 9999999999999987 4556632 4599999999999999 7999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccc
Q 001857 898 TSESALDTSYFTS 910 (1003)
Q Consensus 898 ~~~s~lDts~F~s 910 (1003)
...+..||++|+.
T Consensus 359 evssd~DTsnFd~ 371 (1317)
T KOG0612|consen 359 EVSSDDDTSNFDV 371 (1317)
T ss_pred cCCCCCccccccc
Confidence 9999999999943
No 11
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.4e-54 Score=491.77 Aligned_cols=256 Identities=34% Similarity=0.639 Sum_probs=243.1
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
..|+..+.||+|||++||.+++..+|..||+|++.+..+.+..+.+.+.+|++|.+.|+|||||++|++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 45999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|+|..++|..++++.+.++|.+++.|++||+.||.|||+++|||||||..||||+.+.+|||+|||||....
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le-------- 169 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE-------- 169 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeec--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999998411
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
....++.+.||||.|+|||++...+|+..+||||+||+||.||+|+|||...+..++
T Consensus 170 -----------------------~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket 226 (592)
T KOG0575|consen 170 -----------------------YDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET 226 (592)
T ss_pred -----------------------CcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH
Confidence 112456789999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
+.+|....+.+| ..+|.++++||++||++||.+|| ++++||.|+||+
T Consensus 227 y~~Ik~~~Y~~P---~~ls~~A~dLI~~lL~~~P~~Rp---sl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 227 YNKIKLNEYSMP---SHLSAEAKDLIRKLLRPNPSERP---SLDEVLDHPFFK 273 (592)
T ss_pred HHHHHhcCcccc---cccCHHHHHHHHHHhcCCcccCC---CHHHHhcCHhhh
Confidence 999999988765 58999999999999999999999 999999999994
No 12
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-54 Score=477.94 Aligned_cols=262 Identities=35% Similarity=0.612 Sum_probs=234.3
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccccc----HHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIR----KNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~----~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
.+.|.+.+.||+|+||.|-+|..+.||+.||||++.+..... ......+.+|++||++|+|||||+++++|...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 355889999999999999999999999999999998865543 2233456799999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC---CcEEEeecCCccccc
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD---GHIKLTDFGLSKVGL 740 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d---G~VKLiDFGLAk~~~ 740 (1003)
.||||||+.||+|++.+-.++.+.+..-+.+++||+.||.|||++||+||||||+|||+..+ -.+||+|||+|++.
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~- 329 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS- 329 (475)
T ss_pred eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc-
Confidence 99999999999999999999999999999999999999999999999999999999999876 68999999999951
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC---CccceeechhHHHHHHHhCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH---GTTADWWSVGIILFELIVGI 817 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y---s~kSDIWSLGVILYELLTGk 817 (1003)
......++.||||.|.|||++.+.++ ..++|||||||+||-+|+|.
T Consensus 330 -------------------------------g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~ 378 (475)
T KOG0615|consen 330 -------------------------------GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGY 378 (475)
T ss_pred -------------------------------ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccC
Confidence 01123568999999999999998764 45789999999999999999
Q ss_pred CCCCCCChhh-HHHhhhccCCCCC-CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 818 PPFNAEHPQQ-IFDNILNRKIPWP-RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 818 ~PF~~~~~~e-i~qkIl~~~~~~P-~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
+||....... +.++|..+.+.+- ..+..+|+++.+||.+||..||+.|| +++|+|+||||+...
T Consensus 379 pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~---s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 379 PPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRP---SADEALNHPWFKDAP 444 (475)
T ss_pred CCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCc---CHHHHhcChhhhccc
Confidence 9998876666 8999999888764 55678999999999999999999999 999999999999765
No 13
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-53 Score=483.40 Aligned_cols=318 Identities=45% Similarity=0.756 Sum_probs=270.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
.-|..++.||-|+||+|.+++...|...||+|.+.|.+...++++.++..|.+||..-++++||+||+.|++++++|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
+|++||++..+|-+.+.|+|+.+++|++++.+|+++.|+.|+|||||||+|||||.+|||||+|||||+ ++.. +++..
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCT-GfRW-THdsk 786 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRW-THDSK 786 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccc-ccee-ccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 3322 21111
Q ss_pred ----CCCccCccc-----CCCCCccchhhhh----hhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001857 749 ----GPAVSGTTL-----LGDEEPQLTASEH----QQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 749 ----~p~~s~ttl-----~g~~~~~lt~~~~----~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT 815 (1003)
+.+....++ .++...-+..... ...+-...+.+||+.|+|||+|...+|+..|||||.|||||||+.
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence 111100111 1111111111111 111223346799999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCCCCCC--CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIPWPR--VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKA 893 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~~P~--lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~ 893 (1003)
|++||-...+.++..++.+.... .. ...++|.++.+||.++.+ +++.|+|...+++|+.||||++|||..++.+.+
T Consensus 867 g~~pf~~~tp~~tq~kv~nw~~~-l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgIDfsslRkq~A 944 (1034)
T KOG0608|consen 867 GQPPFLADTPGETQYKVINWRNF-LHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGIDFSSLRKQRA 944 (1034)
T ss_pred CCCCccCCCCCcceeeeeehhhc-cccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccccchHhhhhccC
Confidence 99999999988888777764422 22 235799999999999887 789999999999999999999999999999999
Q ss_pred CccCCCCCCCCCCCccc
Q 001857 894 AFVPTSESALDTSYFTS 910 (1003)
Q Consensus 894 pfvP~~~s~lDts~F~s 910 (1003)
+|+|...-..|+++|+.
T Consensus 945 pYIP~ItHptDTSNFdp 961 (1034)
T KOG0608|consen 945 PYIPRITHPTDTSNFDP 961 (1034)
T ss_pred CcCccccCCCccccCCc
Confidence 99999999999999976
No 14
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-53 Score=464.79 Aligned_cols=301 Identities=37% Similarity=0.776 Sum_probs=275.9
Q ss_pred CCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc
Q 001857 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR 661 (1003)
Q Consensus 583 k~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~ 661 (1003)
...+...+|.++.+||+|+||+|.+|..+.+.+.||||++++..+.+.+.++..+.|.++|... +-|++++++.+|++-
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 4466678999999999999999999999999999999999999999888889999999999876 468999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
+.+|+||||+.||+|..+|+..+.+.|..+.+|+++|+-||-|||++|||+||||.+|||++.+|||||+|||+++....
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999984211
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
....++++||||.|+|||++..++|+.++||||+||+|||||.|++||.
T Consensus 503 -------------------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 503 -------------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred -------------------------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 1123578999999999999999999999999999999999999999999
Q ss_pred CCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCC--CHHHHHcCCCCCCCChhHHhhh--cCCccC
Q 001857 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVP 897 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~--TAeELLqHPFFk~Idwd~L~~~--k~pfvP 897 (1003)
+.+.+++++.|+.....+ |..+|.++.+++..+|.+.|.+|+|++ .-.+|..||||..|+|+.+.+. .|||.|
T Consensus 552 GeDE~elF~aI~ehnvsy---PKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkP 628 (683)
T KOG0696|consen 552 GEDEDELFQAIMEHNVSY---PKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKP 628 (683)
T ss_pred CCCHHHHHHHHHHccCcC---cccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCC
Confidence 999999999999988765 468999999999999999999999984 5579999999999999999887 589999
Q ss_pred CCCCCCCCCCcccccccCCC
Q 001857 898 TSESALDTSYFTSRYSWNTT 917 (1003)
Q Consensus 898 ~~~s~lDts~F~s~~s~~~t 917 (1003)
..+..-+.++|+..|.-..+
T Consensus 629 k~k~~r~~eNFD~~Ft~~~~ 648 (683)
T KOG0696|consen 629 KIKCGRDAENFDKFFTREPT 648 (683)
T ss_pred ccccCCchhhhhHHHhcCCC
Confidence 99888889999876654443
No 15
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.1e-50 Score=444.82 Aligned_cols=318 Identities=42% Similarity=0.766 Sum_probs=256.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.+|..++||||++++++|.+.+++||||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998765555566678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...........
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999998742111000000
Q ss_pred CC----------CccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCC
Q 001857 749 GP----------AVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 749 ~p----------~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~ 818 (1003)
.. ........... ................+||+.|+|||++.+..++.++|||||||++|||++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKR---KAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred ccccccccccccccccccccccc---cccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 00 00000000000 000000000112235689999999999999999999999999999999999999
Q ss_pred CCCCCChhhHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccC
Q 001857 819 PFNAEHPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVP 897 (1003)
Q Consensus 819 PF~~~~~~ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP 897 (1003)
||...+..+.+..++.....++. ....+++++++||.+||. +|.+|++..++.++++||||++++|+.+....++++|
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~ 316 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEHIRERPAPIIP 316 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCHHHHhhcCCCCCC
Confidence 99998888888887765433221 122579999999999997 9999995556999999999999999998888888888
Q ss_pred CCCCCCCCCCccc
Q 001857 898 TSESALDTSYFTS 910 (1003)
Q Consensus 898 ~~~s~lDts~F~s 910 (1003)
...+..|.++|..
T Consensus 317 ~~~~~~~~~~~~~ 329 (364)
T cd05599 317 ELKSITDTSNFDD 329 (364)
T ss_pred CCCCchhhhhccc
Confidence 8877777777753
No 16
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-51 Score=451.62 Aligned_cols=259 Identities=32% Similarity=0.608 Sum_probs=235.4
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce-
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN- 663 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~- 663 (1003)
....++.+.++.||+|+.|+||+|+|+.|++.||+|++.. ..+....+++.+|+++++.++|||||++|++|.....
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 3556789999999999999999999999999999999943 2345666889999999999999999999999999995
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
++|+||||+||+|.+++.+.++++|..+..++.+++.||.|||. ++||||||||+|||++..|.|||||||.++...
T Consensus 153 isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv-- 230 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV-- 230 (364)
T ss_pred EEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh--
Confidence 99999999999999999999999999999999999999999995 999999999999999999999999999988410
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.....+++||..|||||.+.+..|+.++||||||++++||++|+.||..
T Consensus 231 -------------------------------nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~ 279 (364)
T KOG0581|consen 231 -------------------------------NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPP 279 (364)
T ss_pred -------------------------------hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCC
Confidence 1134679999999999999999999999999999999999999999977
Q ss_pred C-----ChhhHHHhhhccCCCCCCCCCC-CCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 823 E-----HPQQIFDNILNRKIPWPRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 823 ~-----~~~ei~qkIl~~~~~~P~lp~~-iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
. +..+++..|+.+.. |.+|.. +|+++++||..||++||.+|+ ++.|+++|||++..
T Consensus 280 ~~~~~~~~~~Ll~~Iv~~pp--P~lP~~~fS~ef~~FV~~CL~Kdp~~R~---s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 280 PNPPYLDIFELLCAIVDEPP--PRLPEGEFSPEFRSFVSCCLRKDPSERP---SAKQLLQHPFIKKF 341 (364)
T ss_pred cCCCCCCHHHHHHHHhcCCC--CCCCcccCCHHHHHHHHHHhcCCcccCC---CHHHHhcCHHHhhc
Confidence 4 67788888887654 567776 999999999999999999999 99999999999854
No 17
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.8e-50 Score=445.07 Aligned_cols=319 Identities=41% Similarity=0.736 Sum_probs=248.8
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+.++..++||||+++++.+.+...+||||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998766555566678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++...........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 99999999999998889999999999999999999999999999999999999999999999999998742110000000
Q ss_pred C----CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 749 G----PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 749 ~----p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
. ...............................+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~ 240 (363)
T cd05628 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (363)
T ss_pred ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence 0 000000000000000000000000112245789999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhhccC--CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCCCCC
Q 001857 825 PQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESA 902 (1003)
Q Consensus 825 ~~ei~qkIl~~~--~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~~s~ 902 (1003)
..+.+.++.... ..+|. ...+++++++||.+|+. +|.+|++..+++||++||||++++|+.+....++..+...+.
T Consensus 241 ~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~~~ 318 (363)
T cd05628 241 PQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWEHIRERPAAIPIEIKSI 318 (363)
T ss_pred HHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHHHHHhCCCCCCccCCCc
Confidence 888888887643 22332 12478999999999886 677776555999999999999999999876654443344444
Q ss_pred CCCCCcc
Q 001857 903 LDTSYFT 909 (1003)
Q Consensus 903 lDts~F~ 909 (1003)
.+++.|+
T Consensus 319 ~~~~~~~ 325 (363)
T cd05628 319 DDTSNFD 325 (363)
T ss_pred chhhccC
Confidence 4555553
No 18
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.6e-50 Score=447.96 Aligned_cols=320 Identities=43% Similarity=0.781 Sum_probs=255.3
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+.++..++||||++++++|.+..++||||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999998765555566778899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC-C
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD-L 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd-l 747 (1003)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......... .
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999999999999988899999999999999999999999999999999999999999999999999996321100000 0
Q ss_pred ---CCCCccCcccCCC-----CCccchhh-------hhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHH
Q 001857 748 ---SGPAVSGTTLLGD-----EEPQLTAS-------EHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 748 ---s~p~~s~ttl~g~-----~~~~lt~~-------~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYE 812 (1003)
...........+. ........ ............+||+.|+|||++.+..|+.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (377)
T cd05629 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240 (377)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence 0000000000000 00000000 00000011224689999999999999999999999999999999
Q ss_pred HHhCCCCCCCCChhhHHHhhhccCC--CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhh
Q 001857 813 LIVGIPPFNAEHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLAR 890 (1003)
Q Consensus 813 LLTGk~PF~~~~~~ei~qkIl~~~~--~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~ 890 (1003)
|++|.+||.+.+..+.+..+..... .+|. ...++.++++||.+||+ +|.+|++..++.++++||||++++|+.+..
T Consensus 241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~~~ 318 (377)
T cd05629 241 CLIGWPPFCSENSHETYRKIINWRETLYFPD-DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTIRQ 318 (377)
T ss_pred hhcCCCCCCCCCHHHHHHHHHccCCccCCCC-CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHHcc
Confidence 9999999998888888887775332 2222 12578999999999998 888888777999999999999999999988
Q ss_pred hcCCccCCCCCCCCCCCccc
Q 001857 891 QKAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 891 ~k~pfvP~~~s~lDts~F~s 910 (1003)
..++++|......+..+|..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~ 338 (377)
T cd05629 319 IRAPFIPQLKSITDTSYFPT 338 (377)
T ss_pred CCCCcccCCCCccccccCCc
Confidence 88899998888777776644
No 19
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.7e-50 Score=445.95 Aligned_cols=320 Identities=44% Similarity=0.741 Sum_probs=253.8
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++.|.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 59999999999999999999999999999999987665556677889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+............
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 99999999999888889999999999999999999999999999999999999999999999999986311000000000
Q ss_pred CC--c--cCccc-----------CCCCCccchh-hhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001857 750 PA--V--SGTTL-----------LGDEEPQLTA-SEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 750 p~--~--s~ttl-----------~g~~~~~lt~-~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYEL 813 (1003)
.. . ..... .+........ ...........+.+||+.|+|||++.+..|+.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 00 0 00000 0000000000 0000011122456899999999999999999999999999999999
Q ss_pred HhCCCCCCCCChhhHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhh-h
Q 001857 814 IVGIPPFNAEHPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLAR-Q 891 (1003)
Q Consensus 814 LTGk~PF~~~~~~ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~-~ 891 (1003)
++|++||.+.+..+....+.......+. ....+++++.+||.+|+ .+|.+|++..+++++++||||++++|..... .
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~~~ 320 (382)
T cd05625 242 LVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQ 320 (382)
T ss_pred HhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChHHHHhcC
Confidence 9999999998887777777654332221 12468999999999986 5999999666699999999999999987544 4
Q ss_pred cCCccCCCCCCCCCCCccc
Q 001857 892 KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 892 k~pfvP~~~s~lDts~F~s 910 (1003)
.+++.|......|+++|+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~ 339 (382)
T cd05625 321 SAPYIPKITHPTDTSNFDP 339 (382)
T ss_pred CCCccCcCCCcchhhhcCC
Confidence 6788999888888888854
No 20
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.5e-50 Score=439.28 Aligned_cols=284 Identities=42% Similarity=0.790 Sum_probs=249.9
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
+.||+|+||.||+|+++.+|+.||||++++...........+.+|..++..++||||+++++.|...+.+||||||++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999999999999999998765555556677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001857 675 DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1003)
Q Consensus 675 SL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ 754 (1003)
+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------------ 148 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------------ 148 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC------------
Confidence 99999998889999999999999999999999999999999999999999999999999998731100
Q ss_pred cccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhc
Q 001857 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILN 834 (1003)
Q Consensus 755 ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~ 834 (1003)
.......+||+.|+|||++.+..|+.++|||||||++|||++|..||...+...++..+..
T Consensus 149 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~ 209 (323)
T cd05571 149 -------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 209 (323)
T ss_pred -------------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence 0112346899999999999999999999999999999999999999999888888888877
Q ss_pred cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCccc
Q 001857 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 835 ~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s 910 (1003)
.... ++..+++++.+||.+||++||.+||+. .++.++++||||.+++|..+... .+++.|......++.+|+.
T Consensus 210 ~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05571 210 EEIR---FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDE 286 (323)
T ss_pred CCCC---CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence 6544 456799999999999999999999964 37999999999999999988765 3677787777777777765
Q ss_pred cc
Q 001857 911 RY 912 (1003)
Q Consensus 911 ~~ 912 (1003)
.+
T Consensus 287 ~~ 288 (323)
T cd05571 287 EF 288 (323)
T ss_pred cc
Confidence 43
No 21
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.1e-50 Score=434.26 Aligned_cols=283 Identities=41% Similarity=0.825 Sum_probs=249.4
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCCh
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL 676 (1003)
||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..++||||+++++.+...+.+|+||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999999999999999876555556667888999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcc
Q 001857 677 YSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTT 756 (1003)
Q Consensus 677 ~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~tt 756 (1003)
.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-------------- 146 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-------------- 146 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC--------------
Confidence 999998889999999999999999999999999999999999999999999999999998731100
Q ss_pred cCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccC
Q 001857 757 LLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRK 836 (1003)
Q Consensus 757 l~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~ 836 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.++.+....
T Consensus 147 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~ 209 (312)
T cd05585 147 -----------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP 209 (312)
T ss_pred -----------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC
Confidence 011234689999999999999999999999999999999999999999988888888887765
Q ss_pred CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCcccccc
Q 001857 837 IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTSRYS 913 (1003)
Q Consensus 837 ~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s~~s 913 (1003)
.. ++..+++++.+||.+||+.||.+||+..++.++++||||...+|..+... .+++.|...+..++++|+..+.
T Consensus 210 ~~---~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (312)
T cd05585 210 LR---FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDEEFT 285 (312)
T ss_pred CC---CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCccchhhcCcccc
Confidence 44 45678999999999999999999998778999999999999999877554 4677777777777777765443
No 22
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.4e-50 Score=437.65 Aligned_cols=287 Identities=40% Similarity=0.800 Sum_probs=251.5
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
...+++|++.+.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|+.++..++||||+++++++.+.+.+
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 93 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRV 93 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEE
Confidence 44578999999999999999999999999999999999876555555667889999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||+.||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 94 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~---- 169 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP---- 169 (329)
T ss_pred EEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcC----
Confidence 9999999999999999988899999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 170 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 219 (329)
T PTZ00263 170 ------------------------------DRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT 219 (329)
T ss_pred ------------------------------CCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC
Confidence 01123579999999999999999999999999999999999999999988
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhhc--CCccCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK--AAFVPTSE 900 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~k--~pfvP~~~ 900 (1003)
...+++.+...... ++..++..+++||.+||+.||.+|++. .+++++++||||++.+|+.+..+. +++.+...
T Consensus 220 ~~~~~~~i~~~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~~~~~~~~~~~~~ 296 (329)
T PTZ00263 220 PFRIYEKILAGRLK---FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRVK 296 (329)
T ss_pred HHHHHHHHhcCCcC---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCC
Confidence 88888888877654 345689999999999999999999964 458999999999999999887653 34444444
Q ss_pred CCCCCCCc
Q 001857 901 SALDTSYF 908 (1003)
Q Consensus 901 s~lDts~F 908 (1003)
...++.+|
T Consensus 297 ~~~~~~~~ 304 (329)
T PTZ00263 297 SPGDTSNF 304 (329)
T ss_pred Ccccchhc
Confidence 44455554
No 23
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.4e-50 Score=432.16 Aligned_cols=285 Identities=41% Similarity=0.811 Sum_probs=252.2
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.++||||+++++.+.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999998765444455677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++||+|.+++.+.+.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~-------- 152 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR-------- 152 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhcc--------
Confidence 999999999999988899999999999999999999999999999999999999999999999999987310
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...+
T Consensus 153 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~ 206 (291)
T cd05612 153 --------------------------DRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI 206 (291)
T ss_pred --------------------------CCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011235799999999999999999999999999999999999999999998888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALD 904 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lD 904 (1003)
++.+......+ +..++..+++||++||+.||.+|++. .+++++++||||+.++|..+... .+++.|......+
T Consensus 207 ~~~i~~~~~~~---~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 283 (291)
T cd05612 207 YEKILAGKLEF---PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDGD 283 (291)
T ss_pred HHHHHhCCcCC---CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCccc
Confidence 98888776544 45679999999999999999999953 36999999999999999987654 4667777777677
Q ss_pred CCCccc
Q 001857 905 TSYFTS 910 (1003)
Q Consensus 905 ts~F~s 910 (1003)
+.+|++
T Consensus 284 ~~~~~~ 289 (291)
T cd05612 284 TSNFDD 289 (291)
T ss_pred cccccC
Confidence 766643
No 24
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.3e-49 Score=440.81 Aligned_cols=317 Identities=43% Similarity=0.719 Sum_probs=248.2
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.++..++||||+++++++.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 59999999999999999999999999999999988766666677889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC-C
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL-S 748 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl-s 748 (1003)
||+||+|.+++.+.+.+++..++.+++||+.||+|||++||+||||||+|||++.+|++||+|||+++.......... .
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 999999999999888999999999999999999999999999999999999999999999999999863110000000 0
Q ss_pred -CCCc-----cCc--------ccCCCCCccchhh-hhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001857 749 -GPAV-----SGT--------TLLGDEEPQLTAS-EHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 749 -~p~~-----s~t--------tl~g~~~~~lt~~-~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYEL 813 (1003)
+... ... ...+.....+... ..........+.+||+.|||||++.+..|+.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 0000 000 0000000000000 000001112457899999999999999999999999999999999
Q ss_pred HhCCCCCCCCChhhHHHhhhccC--CCCCCCCCCCCHHHHHHHHhhccCC--cCCcCCCCCHHHHHcCCCCCCCChhHHh
Q 001857 814 IVGIPPFNAEHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTED--PHQRLGSGGASEVKQHVFFKDINWDTLA 889 (1003)
Q Consensus 814 LTGk~PF~~~~~~ei~qkIl~~~--~~~P~lp~~iS~elkDLIrrcL~kD--P~kRPg~~TAeELLqHPFFk~Idwd~L~ 889 (1003)
++|.+||...+..+....+.... ..+|. ...+++++.+||.+||..+ +..|+ ++.++++||||++++|....
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~dli~~ll~~~~~~~~R~---~~~~~l~hp~f~~~~~~~~~ 317 (381)
T cd05626 242 LVGQPPFLAPTPTETQLKVINWENTLHIPP-QVKLSPEAVDLITKLCCSAEERLGRN---GADDIKAHPFFSEVDFSSDI 317 (381)
T ss_pred HhCCCCCcCCCHHHHHHHHHccccccCCCC-CCCCCHHHHHHHHHHccCcccccCCC---CHHHHhcCcccCCCChhHHh
Confidence 99999999888777666665432 22221 2358999999999976544 44488 99999999999999998754
Q ss_pred h-hcCCccCCCCCCCCCCCccc
Q 001857 890 R-QKAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 890 ~-~k~pfvP~~~s~lDts~F~s 910 (1003)
. ..+|++|......++++|+.
T Consensus 318 ~~~~~~~~p~~~~~~~~~~~~~ 339 (381)
T cd05626 318 RTQPAPYVPKISHPMDTSNFDP 339 (381)
T ss_pred hcCCCCccCcCCCcchhhhcCC
Confidence 4 35688888877778777754
No 25
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.8e-49 Score=437.90 Aligned_cols=321 Identities=43% Similarity=0.724 Sum_probs=252.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||.||+|+++.+++.||||++.+...........+.+|+.+|..++||||+++++.|.+.+.+||||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765544556678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|............
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999998531100000000
Q ss_pred CC-------CccCcccCCC----CCccchh-hhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC
Q 001857 749 GP-------AVSGTTLLGD----EEPQLTA-SEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG 816 (1003)
Q Consensus 749 ~p-------~~s~ttl~g~----~~~~lt~-~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTG 816 (1003)
.. .......... ....+.. .............+||+.|||||++.+..++.++|||||||++|||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G 240 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence 00 0000000000 0000000 0000011122356899999999999999999999999999999999999
Q ss_pred CCCCCCCChhhHHHhhhccCCCCC-CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHh-hhcCC
Q 001857 817 IPPFNAEHPQQIFDNILNRKIPWP-RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLA-RQKAA 894 (1003)
Q Consensus 817 k~PF~~~~~~ei~qkIl~~~~~~P-~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~-~~k~p 894 (1003)
++||.+.+..+....+......+. .....+++++.+||.+|+ .+|.+|++..++.++++||||++++|..+. ...++
T Consensus 241 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~~~~~~~~ 319 (376)
T cd05598 241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASLIRRQKAP 319 (376)
T ss_pred CCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHHhhcCCCC
Confidence 999999888777776665432221 112468999999999987 599999987789999999999999999885 44578
Q ss_pred ccCCCCCCCCCCCccc
Q 001857 895 FVPTSESALDTSYFTS 910 (1003)
Q Consensus 895 fvP~~~s~lDts~F~s 910 (1003)
++|......++++|..
T Consensus 320 ~~~~~~~~~~~~~~~~ 335 (376)
T cd05598 320 YIPKITHPTDTSNFDP 335 (376)
T ss_pred CCCcCCCcchhhhcCC
Confidence 8888777777777654
No 26
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.7e-49 Score=437.32 Aligned_cols=319 Identities=42% Similarity=0.758 Sum_probs=251.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+.++..++||||+++++.|.+.+++||||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765555666778899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++...........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 99999999999998889999999999999999999999999999999999999999999999999998742111000000
Q ss_pred ----CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 749 ----GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 749 ----~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........+.......................+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~ 240 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence 0000000000000000000000001112235689999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhhccCC--CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCCCCC
Q 001857 825 PQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESA 902 (1003)
Q Consensus 825 ~~ei~qkIl~~~~--~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~~s~ 902 (1003)
....+..++.... .+|. ...+++++++||.+|+. ||.+|++..++.++++||||++++|..+....++..+...+.
T Consensus 241 ~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~~~ 318 (360)
T cd05627 241 PQETYRKVMNWKETLVFPP-EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVDWGHIRERPAAIPIEIKSI 318 (360)
T ss_pred HHHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCCHHHHhcCCCCCCccCCCc
Confidence 8888888876432 2222 12478999999999875 999999877899999999999999999877654443444555
Q ss_pred CCCCCcc
Q 001857 903 LDTSYFT 909 (1003)
Q Consensus 903 lDts~F~ 909 (1003)
.|.++|.
T Consensus 319 ~~~~~~~ 325 (360)
T cd05627 319 DDTSNFD 325 (360)
T ss_pred chhhhcC
Confidence 6666664
No 27
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.9e-49 Score=431.05 Aligned_cols=286 Identities=39% Similarity=0.773 Sum_probs=250.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++.+...+.+|+||||++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999999999999999998765555556678889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001857 675 DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1003)
Q Consensus 675 SL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ 754 (1003)
+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------------ 148 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------------ 148 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc------------
Confidence 99999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred cccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhc
Q 001857 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILN 834 (1003)
Q Consensus 755 ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~ 834 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+..+.+..
T Consensus 149 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~ 209 (328)
T cd05593 149 -------------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 209 (328)
T ss_pred -------------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc
Confidence 0112346799999999999999999999999999999999999999998888888877766
Q ss_pred cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCccc
Q 001857 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 835 ~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s 910 (1003)
.... ++..+++++.+||.+||++||.+|++. .++.++++||||.+++|..+... .+++.|...+..+..+|..
T Consensus 210 ~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (328)
T cd05593 210 EDIK---FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDE 286 (328)
T ss_pred CCcc---CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCc
Confidence 5543 456789999999999999999999864 38999999999999999987655 3677888877778877776
Q ss_pred cccc
Q 001857 911 RYSW 914 (1003)
Q Consensus 911 ~~s~ 914 (1003)
.++.
T Consensus 287 ~~~~ 290 (328)
T cd05593 287 EFTA 290 (328)
T ss_pred cccc
Confidence 5543
No 28
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.2e-49 Score=432.55 Aligned_cols=315 Identities=48% Similarity=0.854 Sum_probs=255.0
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+|++..+++.||||++++...........+.+|+.++..++||||+++++++.+.+++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998766555566678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++|++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......... .
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~-~ 159 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE-Y 159 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc-c
Confidence 999999999999888899999999999999999999999999999999999999999999999999987421111000 0
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
............. ..................+||+.|+|||++.+..++.++|||||||++|||++|+.||...+....
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 160 YLNDSHNLLFRDN-VLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccc-ccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 0000000000000 000000000111223456899999999999999999999999999999999999999999888888
Q ss_pred HHhhhc--cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCC-HHHHHcCCCCCCCChhHHhhhcCCccCCCCCCCCC
Q 001857 829 FDNILN--RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGG-ASEVKQHVFFKDINWDTLARQKAAFVPTSESALDT 905 (1003)
Q Consensus 829 ~qkIl~--~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~T-AeELLqHPFFk~Idwd~L~~~k~pfvP~~~s~lDt 905 (1003)
+..+.. ....+|.. ..+++++.+||.+||. ||.+|+ + +.++++||||++++|+......++++|......++
T Consensus 239 ~~~i~~~~~~~~~p~~-~~~~~~~~~li~~ll~-dp~~R~---~s~~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (350)
T cd05573 239 YNKIINWKESLRFPPD-PPVSPEAIDLICRLLC-DPEDRL---GSFEEIKSHPFFKGIDWENLRETKPPFVPELSSPLDT 313 (350)
T ss_pred HHHHhccCCcccCCCC-CCCCHHHHHHHHHHcc-ChhhcC---CCHHHHhcCCCcCCCCHHHHhhCCCCcCCCCCCchhh
Confidence 888876 33333332 2379999999999998 999999 6 99999999999999999887788888888777776
Q ss_pred CCccc
Q 001857 906 SYFTS 910 (1003)
Q Consensus 906 s~F~s 910 (1003)
..|+.
T Consensus 314 ~~~~~ 318 (350)
T cd05573 314 SNFDD 318 (350)
T ss_pred hhcCC
Confidence 66644
No 29
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.3e-49 Score=427.82 Aligned_cols=287 Identities=36% Similarity=0.772 Sum_probs=247.8
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC-cEEEEEeeeeccceEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP-FVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HP-NIVkL~~~f~d~~~lyLVm 668 (1003)
+|++++.||+|+||.||+|++..+++.||||++.+.........+.+..|..++..++|+ +|++++++|...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999999876554555667788999999998765 6889999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~------ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG------ 154 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC------
Confidence 99999999999988888999999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 155 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~ 209 (324)
T cd05587 155 -------------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL 209 (324)
T ss_pred -------------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence 0112346899999999999999999999999999999999999999999998888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALD 904 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lD 904 (1003)
+..+...... ++..++.++.+||.+||.+||.+|++. ....++++||||+.++|..+... .+++.|......+
T Consensus 210 ~~~i~~~~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (324)
T cd05587 210 FQSIMEHNVS---YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRS 286 (324)
T ss_pred HHHHHcCCCC---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCcCCCcch
Confidence 8888876544 456789999999999999999999965 24589999999999999988654 3566666655555
Q ss_pred CCCccc
Q 001857 905 TSYFTS 910 (1003)
Q Consensus 905 ts~F~s 910 (1003)
.++|+.
T Consensus 287 ~~~~~~ 292 (324)
T cd05587 287 AENFDK 292 (324)
T ss_pred hhhcCc
Confidence 555543
No 30
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.6e-49 Score=436.03 Aligned_cols=289 Identities=39% Similarity=0.784 Sum_probs=254.1
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCCC-CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTG-DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~tg-k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
....+++|++++.||+|+||.||+|++..++ ..||+|++.+.........+.+.+|+.++..++||||+++++++.+.+
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 104 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES 104 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence 4556789999999999999999999976654 689999998765555556678899999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
.+|+||||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.+|++||+|||+++...
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~-- 182 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD-- 182 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecC--
Confidence 999999999999999999988899999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
......+||+.|||||++.+..++.++|||||||++|||++|.+||.+
T Consensus 183 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 183 --------------------------------TRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred --------------------------------CCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 011246799999999999999999999999999999999999999999
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCC
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~ 898 (1003)
.+...+++.+...... +|..+++.+.+||++||+.||.+|++. .+++++++||||.+++|..+... .+|++|.
T Consensus 231 ~~~~~~~~~i~~~~~~---~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~ 307 (340)
T PTZ00426 231 NEPLLIYQKILEGIIY---FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPK 307 (340)
T ss_pred CCHHHHHHHHhcCCCC---CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 9888888888876654 346789999999999999999999754 38999999999999999987755 4678888
Q ss_pred CCCCCCCCCcc
Q 001857 899 SESALDTSYFT 909 (1003)
Q Consensus 899 ~~s~lDts~F~ 909 (1003)
.....+.++|.
T Consensus 308 ~~~~~~~~~~~ 318 (340)
T PTZ00426 308 YKNVFDSSNFE 318 (340)
T ss_pred CCCCcchhhcC
Confidence 76666665553
No 31
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.2e-48 Score=425.46 Aligned_cols=284 Identities=36% Similarity=0.762 Sum_probs=245.6
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+|++++.||+|+||+||+|++..+++.||||++.+...........+..|..++..+ +||+|+++++++.+.+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999876544455556677888888777 5899999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++||+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~------ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD------ 154 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC------
Confidence 99999999999988889999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+...+
T Consensus 155 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~ 209 (323)
T cd05616 155 -------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 209 (323)
T ss_pred -------------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH
Confidence 0112346899999999999999999999999999999999999999999999889
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALD 904 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lD 904 (1003)
++.+...... +|..++.++.+||.+||++||.+|++. ....++++||||+.++|+.+... .+++.|... ..|
T Consensus 210 ~~~i~~~~~~---~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 285 (323)
T cd05616 210 FQSIMEHNVA---YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKAC-GRD 285 (323)
T ss_pred HHHHHhCCCC---CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCC-Cch
Confidence 9888876654 346789999999999999999999975 35789999999999999998765 366776543 244
Q ss_pred CCCc
Q 001857 905 TSYF 908 (1003)
Q Consensus 905 ts~F 908 (1003)
..+|
T Consensus 286 ~~~~ 289 (323)
T cd05616 286 AENF 289 (323)
T ss_pred hhhc
Confidence 4444
No 32
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=9.4e-49 Score=427.43 Aligned_cols=285 Identities=44% Similarity=0.813 Sum_probs=251.1
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||.||+|++..+++.||||++++...........+.+|+.++..++||||+++++++...+++||||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46999999999999999999999999999999998765544556678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~-------- 152 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV-------- 152 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccc--------
Confidence 999999999999988899999999999999999999999999999999999999999999999999987310
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
......+||+.|+|||++.+..++.++|||||||++|||++|.+||...+..+.
T Consensus 153 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~ 206 (333)
T cd05600 153 --------------------------TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET 206 (333)
T ss_pred --------------------------cccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence 012346799999999999999999999999999999999999999999888887
Q ss_pred HHhhhccCC--CCCCCC---CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCCCCCC
Q 001857 829 FDNILNRKI--PWPRVP---EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESAL 903 (1003)
Q Consensus 829 ~qkIl~~~~--~~P~lp---~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~~s~l 903 (1003)
+..+..... ..|... ..++.++.+||.+||..+|.+|| ++.++++||||++++|..+....++++|......
T Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~---s~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (333)
T cd05600 207 WENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFG---SLEDIKNHPFFKEVDWNELRELKPPFVPELESEI 283 (333)
T ss_pred HHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcC---CHHHHHhCcccCCCCHHHHhhCCCCCCCCCCCcc
Confidence 777765332 112211 25689999999999999999999 9999999999999999998877888999887777
Q ss_pred CCCCccc
Q 001857 904 DTSYFTS 910 (1003)
Q Consensus 904 Dts~F~s 910 (1003)
+..+|..
T Consensus 284 ~~~~~~~ 290 (333)
T cd05600 284 DTGYFDD 290 (333)
T ss_pred hhhhccC
Confidence 6666643
No 33
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.3e-48 Score=424.83 Aligned_cols=282 Identities=39% Similarity=0.774 Sum_probs=243.8
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||.||+|+++.+++.||||++++...........+..|..++..+ +||||++++++|.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3699999999999999999999999999876555555667788899998865 899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~----------- 149 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN----------- 149 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+....++.+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~ 209 (321)
T cd05591 150 --------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL 209 (321)
T ss_pred --------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 011234679999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCC----CHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCC
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG----GASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSY 907 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~----TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~ 907 (1003)
..... .+..++.++.+||.+||++||.+|+++. ++.++++||||..++|..+... .+++.|......+..+
T Consensus 210 ~~~~~---~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (321)
T cd05591 210 HDDVL---YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNN 286 (321)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCCCCCcchhhh
Confidence 76654 3456899999999999999999999762 7899999999999999988654 3566666655555555
Q ss_pred ccc
Q 001857 908 FTS 910 (1003)
Q Consensus 908 F~s 910 (1003)
|.+
T Consensus 287 ~~~ 289 (321)
T cd05591 287 FDQ 289 (321)
T ss_pred cCC
Confidence 543
No 34
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7.7e-49 Score=427.61 Aligned_cols=282 Identities=40% Similarity=0.795 Sum_probs=245.6
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|+++.+++.||||++.+.........+.+..|..++..+ +||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999999999999999999876544455667778898888876 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|.+++.+.+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~----------- 149 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN----------- 149 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-----------
Confidence 999999998889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..++++.+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~ 209 (320)
T cd05590 150 --------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 209 (320)
T ss_pred --------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh
Confidence 011234679999999999999999999999999999999999999999999988988888
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC---CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYF 908 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~---~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F 908 (1003)
..... ++..++.++.+||++||++||.+|+++ .+.+++++||||++++|+.+..+ .+++.|...+..+.++|
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
T cd05590 210 NDEVV---YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNF 286 (320)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhc
Confidence 76654 345789999999999999999999954 23499999999999999988654 47888888777777777
Q ss_pred cc
Q 001857 909 TS 910 (1003)
Q Consensus 909 ~s 910 (1003)
+.
T Consensus 287 ~~ 288 (320)
T cd05590 287 DP 288 (320)
T ss_pred Cc
Confidence 54
No 35
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-49 Score=438.42 Aligned_cols=261 Identities=33% Similarity=0.626 Sum_probs=238.7
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
..+.+|.+.+.||+|+||+||+|+++.++..||||.+.+..+ ..+..+.+..|+.+|+.++|||||.++++..+.+++|
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence 356789999999999999999999999999999999988765 4556688899999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC------CcEEEeecCCcccc
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD------GHIKLTDFGLSKVG 739 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d------G~VKLiDFGLAk~~ 739 (1003)
||||||.||+|.++|++.+.+++..++.++.||+.||++||+++||||||||.||||+.. -.+||+|||+|+..
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999999999999999999999999999999999999999999999874 35899999999951
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~P 819 (1003)
. .+....+.||+|.|||||++..+.|+.|+|+||+|+|+|+|++|++|
T Consensus 166 ~--------------------------------~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~P 213 (429)
T KOG0595|consen 166 Q--------------------------------PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPP 213 (429)
T ss_pred C--------------------------------chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCC
Confidence 1 12234578999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 820 FNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 820 F~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
|...+..+++..+..+....|.++..++....+|+..+|+.+|.+|. +..+-+.|+|...
T Consensus 214 f~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~---~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 214 FDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRI---SFEDFFDHPFLAA 273 (429)
T ss_pred ccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccC---chHHhhhhhhccc
Confidence 99999999999998888777778888999999999999999999999 7888888888764
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.7e-48 Score=416.03 Aligned_cols=278 Identities=34% Similarity=0.598 Sum_probs=234.8
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.|++++.||+|+||+||+|.+..+|+.||+|++.+...........+.+|+.++..++|+||+++++++.+.+.+|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 38899999999999999999999999999999987654444445677899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~------ 154 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE------ 154 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC------
Confidence 99999999888643 3689999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
.......+||+.|||||++.+..++.++|||||||++|+|++|+.||.......
T Consensus 155 --------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~ 208 (285)
T cd05631 155 --------------------------GETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV 208 (285)
T ss_pred --------------------------CCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch
Confidence 001123579999999999999999999999999999999999999998765432
Q ss_pred HHHhhhccC-CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCC
Q 001857 828 IFDNILNRK-IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1003)
Q Consensus 828 i~qkIl~~~-~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~ 899 (1003)
....+.... .....++..++.++.+||++||+.||.+||+. .+++++++||||++++|+.+... +|||+|.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 285 (285)
T cd05631 209 KREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPDP 285 (285)
T ss_pred hHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCCC
Confidence 222221111 11123456789999999999999999999964 35999999999999999999887 68888863
No 37
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-49 Score=441.89 Aligned_cols=260 Identities=39% Similarity=0.707 Sum_probs=234.6
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH--HHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK--NAVESILAERDILISVR-NPFVVRFFYSFTCRE 662 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~--~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~ 662 (1003)
...+.|++.+.||+|+||+|++|++..++..||+|++.+...... ...+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 445789999999999999999999999999999998877533211 34466778999999999 999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC-CcEEEeecCCcccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~~~~ 741 (1003)
.+|+|||||.||+|++++.+.+++.|..++.+++||+.|++|||++||+||||||+|||++.+ +++||+|||++....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~- 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP- 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC-
Confidence 999999999999999999999999999999999999999999999999999999999999999 999999999998410
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC-C-CccceeechhHHHHHHHhCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-H-GTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~-y-s~kSDIWSLGVILYELLTGk~P 819 (1003)
.......+.||||.|+|||++.+.. | +.++||||+||+||.|++|..|
T Consensus 173 ------------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~P 222 (370)
T KOG0583|consen 173 ------------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLP 222 (370)
T ss_pred ------------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCC
Confidence 0112345789999999999999987 8 5899999999999999999999
Q ss_pred CCCCChhhHHHhhhccCCCCCCCCCCC-CHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 820 FNAEHPQQIFDNILNRKIPWPRVPEEM-SPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 820 F~~~~~~ei~qkIl~~~~~~P~lp~~i-S~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
|...+...++..|..+.+.+| ..+ |+++++||++||..||.+|+ ++.+|+.||||+.
T Consensus 223 F~d~~~~~l~~ki~~~~~~~p---~~~~S~~~~~Li~~mL~~~P~~R~---t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 223 FDDSNVPNLYRKIRKGEFKIP---SYLLSPEARSLIEKMLVPDPSTRI---TLLEILEHPWFQK 280 (370)
T ss_pred CCCccHHHHHHHHhcCCccCC---CCcCCHHHHHHHHHHcCCCcccCC---CHHHHhhChhhcc
Confidence 999999999999998887665 456 99999999999999999999 9999999999985
No 38
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-51 Score=456.53 Aligned_cols=292 Identities=36% Similarity=0.730 Sum_probs=273.2
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
..+.+++++..||-||||.|=+++.......+|+|+++|..+.+..+.+++..|.+||..+++|+||++|-.|.+..++|
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 45678999999999999999999987666679999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|+||-|-||+|+..++..+.|++..+++|++.++.|++|||++|||+|||||+|.|++.+|.+||.|||+|+..
T Consensus 497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki------ 570 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI------ 570 (732)
T ss_pred hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999841
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
..+.++.++||||.|.|||++.+++++.++|+||||+++||||+|.+||.+.++
T Consensus 571 --------------------------~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 571 --------------------------GSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred --------------------------ccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 223567789999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSES 901 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s 901 (1003)
..+|..|+++- ....+|..++..+.+||+++...+|.+|+|+ +++.+|.+|.||.+.||+.+..+ .||++|...+
T Consensus 625 mktYn~ILkGi-d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ 703 (732)
T KOG0614|consen 625 MKTYNLILKGI-DKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVAN 703 (732)
T ss_pred HHHHHHHHhhh-hhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCC
Confidence 99999999864 3345678899999999999999999999995 79999999999999999999876 5899999999
Q ss_pred CCCCCCccc
Q 001857 902 ALDTSYFTS 910 (1003)
Q Consensus 902 ~lDts~F~s 910 (1003)
+.|++||+.
T Consensus 704 ptD~s~Fd~ 712 (732)
T KOG0614|consen 704 PTDVSNFDN 712 (732)
T ss_pred cccchhccC
Confidence 999999976
No 39
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.4e-48 Score=421.25 Aligned_cols=286 Identities=42% Similarity=0.781 Sum_probs=246.1
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHH---HhcCCCcEEEEEeeeeccceEEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDIL---ISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL---~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
|++++.||+|+||.||+|++..+++.||||++++.........+.+.+|..++ ..++||||+++++++.+.+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78999999999999999999999999999999876544455566777777765 456799999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||++||+|..++.. +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~----- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF----- 154 (324)
T ss_pred EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-----
Confidence 999999999988865 57999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
.......+||+.|||||++.+..++.++|||||||++|+|++|+.||.+.+..+
T Consensus 155 --------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~ 208 (324)
T cd05589 155 --------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE 208 (324)
T ss_pred --------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH
Confidence 011235689999999999999999999999999999999999999999998888
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESAL 903 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~l 903 (1003)
++..+...... ++..+++++.+||.+||++||.+||+. .++.++++||||++++|..+... .++++|......
T Consensus 209 ~~~~i~~~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (324)
T cd05589 209 VFDSIVNDEVR---YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTIKGPE 285 (324)
T ss_pred HHHHHHhCCCC---CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCCCCcc
Confidence 88888776543 456789999999999999999999975 37999999999999999887654 367777776666
Q ss_pred CCCCcccc
Q 001857 904 DTSYFTSR 911 (1003)
Q Consensus 904 Dts~F~s~ 911 (1003)
|.++|...
T Consensus 286 d~~~~~~~ 293 (324)
T cd05589 286 DVSNFDEE 293 (324)
T ss_pred hhhhcCcc
Confidence 66666543
No 40
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-49 Score=429.08 Aligned_cols=298 Identities=35% Similarity=0.726 Sum_probs=268.5
Q ss_pred CCCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeec
Q 001857 582 SKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTC 660 (1003)
Q Consensus 582 sk~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~-L~HPNIVkL~~~f~d 660 (1003)
+.+...+.+|.++++||+|+|++|.++++++|.+.||+|+++|.-....+.++-+..|..+... .+||++|-++.+|++
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 4567788999999999999999999999999999999999999877777788888899888866 489999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 661 RENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 661 ~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
+..+++|.||++||+|..++++...++++.+++|..+|+.||.|||++|||+||||.+|+|++..||+||+|+|+++.+.
T Consensus 323 esrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998532
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
. .+..+.++||||.|+|||+++|..|++.+|||+|||+|+||+.|+.||
T Consensus 403 ~-------------------------------~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 403 G-------------------------------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred C-------------------------------CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence 1 123356799999999999999999999999999999999999999999
Q ss_pred CC--------CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC---CCHHHHHcCCCCCCCChhHHh
Q 001857 821 NA--------EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLA 889 (1003)
Q Consensus 821 ~~--------~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~---~TAeELLqHPFFk~Idwd~L~ 889 (1003)
.- ...+.+++-|+...+. +|..+|-.+..+++..|.+||.+|+|+ -+..++..|+||..++|+.+.
T Consensus 452 divgm~n~d~ntedylfqvilekqir---iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~le 528 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIR---IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLE 528 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhccc---ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHh
Confidence 51 2345567888877764 457889999999999999999999997 378999999999999999998
Q ss_pred hh--cCCccCCCCCCCCCCCcccccc
Q 001857 890 RQ--KAAFVPTSESALDTSYFTSRYS 913 (1003)
Q Consensus 890 ~~--k~pfvP~~~s~lDts~F~s~~s 913 (1003)
+. .|||.|...+..+..+|+..|+
T Consensus 529 qk~v~ppf~p~i~~d~~l~~fd~qft 554 (593)
T KOG0695|consen 529 QKQVLPPFQPQITDDYGLDNFDTQFT 554 (593)
T ss_pred hcccCCCCCCccccccCccccccccc
Confidence 76 4899999999888888888764
No 41
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.2e-48 Score=420.38 Aligned_cols=282 Identities=41% Similarity=0.810 Sum_probs=242.2
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~-L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|++..+++.||||++++.........+.+..|..++.. .+||||+++++++.....+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 369999999999999999999999999987654444455666777777765 4899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~----------- 149 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG----------- 149 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+++..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~ 209 (316)
T cd05592 150 --------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL 209 (316)
T ss_pred --------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 011234689999999999999999999999999999999999999999998888888876
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCcccc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTSR 911 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s~ 911 (1003)
... +.++..++.++.+||.+||..||.+||+ .+.++++||||..++|..+... .+++.|......+.++|+..
T Consensus 210 ~~~---~~~~~~~~~~~~~ll~~~l~~~P~~R~~--~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (316)
T cd05592 210 NDR---PHFPRWISKEAKDCLSKLFERDPTKRLG--VDGDIRQHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDRE 284 (316)
T ss_pred cCC---CCCCCCCCHHHHHHHHHHccCCHHHcCC--ChHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcc
Confidence 654 3455678999999999999999999993 2468999999999999988654 36777777777777777654
Q ss_pred c
Q 001857 912 Y 912 (1003)
Q Consensus 912 ~ 912 (1003)
+
T Consensus 285 ~ 285 (316)
T cd05592 285 F 285 (316)
T ss_pred c
Confidence 3
No 42
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.9e-48 Score=420.71 Aligned_cols=283 Identities=41% Similarity=0.810 Sum_probs=242.1
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHH-HHHhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD-ILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~-IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|++..+|+.||+|++.+...........+.+|.. +++.++||||+++++.+...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999999999999999998765444444456666665 45779999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~----------- 149 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH----------- 149 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-----------
Confidence 999999998889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+++..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~ 209 (323)
T cd05575 150 --------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL 209 (323)
T ss_pred --------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence 011234679999999999999999999999999999999999999999988888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC-CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCccc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~-~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s 910 (1003)
..... ++..++.++.+||++||++||.+||+. ....++++||||..++|..+... .+++.|......+...|+.
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05575 210 NKPLR---LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDP 286 (323)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhccCCCCcCCCCCCcchhhhcCc
Confidence 76543 345689999999999999999999954 34589999999999999988765 3677777766666666654
Q ss_pred c
Q 001857 911 R 911 (1003)
Q Consensus 911 ~ 911 (1003)
.
T Consensus 287 ~ 287 (323)
T cd05575 287 E 287 (323)
T ss_pred c
Confidence 3
No 43
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.4e-48 Score=423.04 Aligned_cols=283 Identities=41% Similarity=0.788 Sum_probs=248.6
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
+.||+|+||.||+|+++.+|+.||+|++.+...........+.+|..+++.++||||++++++|...+.+||||||++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999999999999999998765545556677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001857 675 DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1003)
Q Consensus 675 SL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ 754 (1003)
+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~------------ 148 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------ 148 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC------------
Confidence 99999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred cccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhc
Q 001857 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILN 834 (1003)
Q Consensus 755 ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~ 834 (1003)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+....+..+..
T Consensus 149 -------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~ 209 (323)
T cd05595 149 -------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 209 (323)
T ss_pred -------------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 0012246799999999999999999999999999999999999999998888888888776
Q ss_pred cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhhc--CCccCCCCCCCCCCCccc
Q 001857 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK--AAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 835 ~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~k--~pfvP~~~s~lDts~F~s 910 (1003)
.... ++..+++++.+||.+||.+||.+|++. .++.++++||||.+++|..+.... +++.|...+..++.+|+.
T Consensus 210 ~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05595 210 EEIR---FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 286 (323)
T ss_pred CCCC---CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCc
Confidence 6554 456789999999999999999999864 489999999999999999887653 677888777778777765
Q ss_pred c
Q 001857 911 R 911 (1003)
Q Consensus 911 ~ 911 (1003)
.
T Consensus 287 ~ 287 (323)
T cd05595 287 E 287 (323)
T ss_pred c
Confidence 4
No 44
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.9e-48 Score=424.44 Aligned_cols=282 Identities=41% Similarity=0.795 Sum_probs=241.3
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L---~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
||+|+||+||+|+++.+++.||||++.+..............|..++..+ +||||++++..|.+...+|+||||++|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999876554445556667777777665 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~----------- 149 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD----------- 149 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC-----------
Confidence 999999998889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNI 832 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkI 832 (1003)
.......+||+.|||||++.+. .++.++|||||||++|+|++|+.||.+.+..++++.+
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i 209 (330)
T cd05586 150 --------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI 209 (330)
T ss_pred --------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH
Confidence 0112346899999999999764 4899999999999999999999999999888888888
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC-CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCcc
Q 001857 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFT 909 (1003)
Q Consensus 833 l~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~-~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~ 909 (1003)
......++. ..+++++.+||++||.+||.+||+. .++.++++||||++++|+.+... .+++.|......+.++|.
T Consensus 210 ~~~~~~~~~--~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (330)
T cd05586 210 AFGKVRFPK--NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFD 287 (330)
T ss_pred HcCCCCCCC--ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCccCCCCCCcchhhcC
Confidence 776655442 3579999999999999999999965 47999999999999999987654 357777776666666665
Q ss_pred cc
Q 001857 910 SR 911 (1003)
Q Consensus 910 s~ 911 (1003)
..
T Consensus 288 ~~ 289 (330)
T cd05586 288 PE 289 (330)
T ss_pred cc
Confidence 43
No 45
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.3e-48 Score=419.54 Aligned_cols=281 Identities=39% Similarity=0.810 Sum_probs=244.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|++..+++.||||++++...........+.+|..++..+ +||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999999876555555667778899999887 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 149 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG----------- 149 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-----------
Confidence 999999998889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...++..+.
T Consensus 150 --------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~ 209 (318)
T cd05570 150 --------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL 209 (318)
T ss_pred --------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence 011234579999999999999999999999999999999999999999988888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCH-----HHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCC
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA-----SEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTS 906 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TA-----eELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts 906 (1003)
..... ++..++.++.+||++||.+||.+|| ++ .++++||||+.++|...... .+++.|......+.+
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~l~~dP~~R~---s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (318)
T cd05570 210 EDEVR---YPRWLSKEAKSILKSFLTKNPEKRL---GCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRFDVS 283 (318)
T ss_pred cCCCC---CCCcCCHHHHHHHHHHccCCHHHcC---CCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhh
Confidence 76543 4567899999999999999999999 66 99999999999999877654 367777777766666
Q ss_pred Cccccc
Q 001857 907 YFTSRY 912 (1003)
Q Consensus 907 ~F~s~~ 912 (1003)
+|+..+
T Consensus 284 ~~~~~~ 289 (318)
T cd05570 284 NFDDEF 289 (318)
T ss_pred hcCchh
Confidence 665533
No 46
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.2e-47 Score=419.54 Aligned_cols=283 Identities=37% Similarity=0.733 Sum_probs=239.8
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|++..+++.||+|++++.........+.+.+|..++..+ +||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876555556667888999999887 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~----------- 149 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP----------- 149 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC-------Chh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE-------HPQ 826 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~-------~~~ 826 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... ...
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~ 209 (327)
T cd05617 150 --------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTED 209 (327)
T ss_pred --------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHH
Confidence 01123468999999999999999999999999999999999999999532 223
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC---CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSES 901 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~---~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s 901 (1003)
.+++.+..... .+|..++..+.++|.+||.+||.+|++. .+.+++++||||+.++|+.+... .+++.|....
T Consensus 210 ~~~~~~~~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
T cd05617 210 YLFQVILEKPI---RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITD 286 (327)
T ss_pred HHHHHHHhCCC---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCC
Confidence 34455544433 3456789999999999999999999964 25789999999999999988765 3577777766
Q ss_pred CCCCCCcccc
Q 001857 902 ALDTSYFTSR 911 (1003)
Q Consensus 902 ~lDts~F~s~ 911 (1003)
..+.++|...
T Consensus 287 ~~~~~~~~~~ 296 (327)
T cd05617 287 DYGLENFDTQ 296 (327)
T ss_pred CcchhhcCCc
Confidence 6666666543
No 47
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.3e-47 Score=418.58 Aligned_cols=276 Identities=37% Similarity=0.790 Sum_probs=241.6
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+|++.+.||+|+||+||+|+++.+|+.||||++.+.........+.+..|..++..+. |++|+++++++.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4889999999999999999999999999999998765444555677888999998875 578889999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~------ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD------ 154 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC------
Confidence 99999999999998889999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+...+
T Consensus 155 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~ 209 (323)
T cd05615 155 -------------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 209 (323)
T ss_pred -------------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence 0112346799999999999999999999999999999999999999999998888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCC--CHHHHHcCCCCCCCChhHHhhh--cCCccCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~--TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~ 899 (1003)
++.+...... +|..++.++.+||.+||+++|.+|++.. ...++++||||..++|..+... .+++.|..
T Consensus 210 ~~~i~~~~~~---~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~ 281 (323)
T cd05615 210 FQSIMEHNVS---YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPKV 281 (323)
T ss_pred HHHHHhCCCC---CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCcc
Confidence 8888876654 4467899999999999999999999752 5789999999999999988765 36776654
No 48
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-47 Score=420.15 Aligned_cols=282 Identities=36% Similarity=0.730 Sum_probs=237.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||.||+|++..+++.||+|++++...........+.+|..++..+ +||||++++++|.+.+.+|||||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876555555667788999999888 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----------- 149 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP----------- 149 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC---------C
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE---------H 824 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~---------~ 824 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||... .
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~ 209 (329)
T cd05588 150 --------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNT 209 (329)
T ss_pred --------------------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccc
Confidence 01123468999999999999999999999999999999999999999632 1
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC---CCHHHHHcCCCCCCCChhHHhhh--cCCccCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~---~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~ 899 (1003)
....++.+..... .+|..++.++.+||++||++||.+|+++ .++.++++||||.+++|+.+... .+++.|..
T Consensus 210 ~~~~~~~~~~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~~ 286 (329)
T cd05588 210 EDYLFQVILEKQI---RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNI 286 (329)
T ss_pred hHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCccccC
Confidence 2234455555443 3456789999999999999999999964 25899999999999999988654 35666666
Q ss_pred CCCCCCCCccc
Q 001857 900 ESALDTSYFTS 910 (1003)
Q Consensus 900 ~s~lDts~F~s 910 (1003)
....+..+|..
T Consensus 287 ~~~~~~~~~~~ 297 (329)
T cd05588 287 ESDRDLDNFDP 297 (329)
T ss_pred CCcchhhhcCC
Confidence 55555555544
No 49
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=9.5e-48 Score=418.34 Aligned_cols=279 Identities=38% Similarity=0.777 Sum_probs=239.0
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~-L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||.||+|+++.+|+.||+|++++..............|..++.. ++||||+++++++.+.+++|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 469999999999999999999999999987544333445667778888875 4899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~------------ 148 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF------------ 148 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc------------
Confidence 99999998888899999999999999999999999999999999999999999999999999863100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
+ .......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+...+++.+.
T Consensus 149 -----~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~ 209 (316)
T cd05620 149 -----G--------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR 209 (316)
T ss_pred -----C--------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 0 011234689999999999999999999999999999999999999999988888888776
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCH-HHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCccc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA-SEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TA-eELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s 910 (1003)
... +.++..++.++++||.+||+.||.+|+ ++ +++++||||+.++|..+... .+++.|......+.++|..
T Consensus 210 ~~~---~~~~~~~~~~~~~li~~~l~~dP~~R~---~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (316)
T cd05620 210 VDT---PHYPRWITKESKDILEKLFERDPTRRL---GVVGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR 283 (316)
T ss_pred hCC---CCCCCCCCHHHHHHHHHHccCCHHHcC---CChHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence 554 345567899999999999999999999 55 68999999999999987654 3667777666666666644
No 50
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.3e-47 Score=417.85 Aligned_cols=281 Identities=39% Similarity=0.769 Sum_probs=242.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~-L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|++..+++.||||++++..............|..++.. ++||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999999999999999987543333445666778888876 5999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------- 149 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG----------- 149 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-----------
Confidence 999999988788999999999999999999999999999999999999999999999999998731000
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..++++.+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~ 209 (316)
T cd05619 150 --------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR 209 (316)
T ss_pred --------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 011234679999999999999999999999999999999999999999988888888776
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHH-HHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCccc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS-EVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAe-ELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s 910 (1003)
.... .++..++.++++||.+||++||.+|| ++. ++++||||+.++|..+... .+++.|...+..+.++|+.
T Consensus 210 ~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~---~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (316)
T cd05619 210 MDNP---CYPRWLTREAKDILVKLFVREPERRL---GVKGDIRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDK 283 (316)
T ss_pred hCCC---CCCccCCHHHHHHHHHHhccCHhhcC---CChHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCccchhhcCh
Confidence 5543 34567899999999999999999999 664 9999999999999988654 4788888888888887765
Q ss_pred cc
Q 001857 911 RY 912 (1003)
Q Consensus 911 ~~ 912 (1003)
.+
T Consensus 284 ~~ 285 (316)
T cd05619 284 EF 285 (316)
T ss_pred hh
Confidence 43
No 51
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.9e-47 Score=414.29 Aligned_cols=289 Identities=41% Similarity=0.769 Sum_probs=246.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+++++.+++.||+|++.+...........+.+|..++..++|+||+++++.+.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999998755444555567888999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~----- 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED----- 155 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccC-----
Confidence 99999999999987 467999999999999999999999999999999999999999999999999998631100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
........+||+.|||||++. ...++.++|||||||++|||++|+.||..
T Consensus 156 -------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 156 -------------------------GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred -------------------------CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 001122457999999999986 34578999999999999999999999999
Q ss_pred CChhhHHHhhhccCC--CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCCC
Q 001857 823 EHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSE 900 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~--~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~~ 900 (1003)
.+..+.+..+..... ++|.....+++++++||++||+.++ +|++..+++++++||||.+++|+.+....++++|...
T Consensus 211 ~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~-~r~~r~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 289 (332)
T cd05623 211 ESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSRE-HRLGQNGIEDFKQHPFFTGIDWDNIRNCEAPYIPEVS 289 (332)
T ss_pred CCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChh-hhcCCCCHHHHhCCCCcCCCCHHHHhhCCCCccCCCC
Confidence 988888888876543 3444445789999999999998644 5554458999999999999999999888888888776
Q ss_pred CCCCCCCc
Q 001857 901 SALDTSYF 908 (1003)
Q Consensus 901 s~lDts~F 908 (1003)
+..+++.+
T Consensus 290 ~~~~~~~~ 297 (332)
T cd05623 290 SPTDTSNF 297 (332)
T ss_pred CCcccccC
Confidence 66655554
No 52
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.7e-47 Score=416.76 Aligned_cols=283 Identities=38% Similarity=0.761 Sum_probs=242.0
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHH-HHhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDI-LISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~I-L~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|+++.+|+.||+|++.+...........+..|..+ ++.++||||+++++.+...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 469999999999999999999999999987644444445566666654 6779999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~----------- 149 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ----------- 149 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|||||++.+..++.++|||||||++|+|++|.+||...+..++++.+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~ 209 (325)
T cd05604 150 --------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNIL 209 (325)
T ss_pred --------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHH
Confidence 011234679999999999999999999999999999999999999999988888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC-CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCccc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~-~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s 910 (1003)
..... ++...+..+.++|++||+++|.+||+. .++.++++||||+.++|..+... .+++.|......+.++|+.
T Consensus 210 ~~~~~---~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05604 210 HKPLV---LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDA 286 (325)
T ss_pred cCCcc---CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCC
Confidence 76543 345689999999999999999999975 36789999999999999988765 3567777666666666654
Q ss_pred c
Q 001857 911 R 911 (1003)
Q Consensus 911 ~ 911 (1003)
.
T Consensus 287 ~ 287 (325)
T cd05604 287 V 287 (325)
T ss_pred c
Confidence 3
No 53
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.8e-47 Score=414.70 Aligned_cols=290 Identities=41% Similarity=0.757 Sum_probs=246.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|..++..++|+||+++++++.+.+.+|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998755444555667888999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG---- 156 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC----
Confidence 99999999999987 4679999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.......+||+.|||||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 157 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 157 --------------------------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred --------------------------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 001123579999999999976 4578899999999999999999999999
Q ss_pred CChhhHHHhhhccC--CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCCC
Q 001857 823 EHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSE 900 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~--~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~~ 900 (1003)
.+..+.+..+.... .++|.....++.++++||.+||+.++ +|++..+++++++||||++++|+.+....++++|...
T Consensus 211 ~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~-~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~p~~~ 289 (331)
T cd05624 211 ESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRE-RRLGQNGIEDFKKHAFFEGIDWENIRNLEAPYIPDVS 289 (331)
T ss_pred CCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCch-hhcCCCCHHHHhcCCCcCCCCHHHHhhCCCCccCCCC
Confidence 88888888887644 33444445679999999999999654 6665568999999999999999999877888888876
Q ss_pred CCCCCCCcc
Q 001857 901 SALDTSYFT 909 (1003)
Q Consensus 901 s~lDts~F~ 909 (1003)
...+.++|+
T Consensus 290 ~~~~~~~~~ 298 (331)
T cd05624 290 SPSDTSNFD 298 (331)
T ss_pred CcchhhhcC
Confidence 665555553
No 54
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.9e-48 Score=419.85 Aligned_cols=284 Identities=42% Similarity=0.787 Sum_probs=247.1
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
+.||+|+||+||+|++..+|+.||+|++.+...........+.+|..++..++||||+++++++...+.+||||||++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999999999999999998765545556677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 675 DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 675 SL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
+|..++.+.+.+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~----------- 149 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD----------- 149 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-----------
Confidence 999999888889999999999999999999997 89999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|||||++.+..++.++|||||||++|+|++|..||.+.+.......+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~ 209 (325)
T cd05594 150 --------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 209 (325)
T ss_pred --------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh
Confidence 011224579999999999999999999999999999999999999999988888888877
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhhc--CCccCCCCCCCCCCCcc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK--AAFVPTSESALDTSYFT 909 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~k--~pfvP~~~s~lDts~F~ 909 (1003)
..... ++..+++++.+||.+||++||.+|++. .++.++++||||.++.|....... +++.|......++.+|+
T Consensus 210 ~~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05594 210 MEEIR---FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFD 286 (325)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcC
Confidence 66544 456789999999999999999999854 389999999999999999876543 67777777777777776
Q ss_pred ccc
Q 001857 910 SRY 912 (1003)
Q Consensus 910 s~~ 912 (1003)
..+
T Consensus 287 ~~~ 289 (325)
T cd05594 287 EEF 289 (325)
T ss_pred chh
Confidence 543
No 55
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.2e-47 Score=414.57 Aligned_cols=282 Identities=41% Similarity=0.804 Sum_probs=238.8
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHH-HHHhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD-ILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~-IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||.||+|++..+++.||+|++.+...........+..|.. +++.++||||+++++.+.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998765444444455666655 57889999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----------- 149 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP----------- 149 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-----------
Confidence 999999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|+|||++.+..++.++|||||||++|||++|.+||...+...++..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 209 (321)
T cd05603 150 --------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL 209 (321)
T ss_pred --------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh
Confidence 011234679999999999999999999999999999999999999999988888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC-CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCccc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~-~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s 910 (1003)
..... ++...+.++.++|.+||++||.+|++. .++.++++|+||..++|..+... .+++.|......+...|+.
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (321)
T cd05603 210 HKPLQ---LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYHKRITPPYNPNVAGPADLRHFDP 286 (321)
T ss_pred cCCCC---CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcCC
Confidence 76543 456789999999999999999999965 36789999999999999987654 3556665555555554443
No 56
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.2e-47 Score=418.27 Aligned_cols=281 Identities=36% Similarity=0.735 Sum_probs=235.2
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|++..+++.||+|++++...........+.+|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876554555667788899988776 899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~----------- 149 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----------- 149 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-----------
Confidence 999999988889999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC---------C
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE---------H 824 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~---------~ 824 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||... .
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~ 209 (329)
T cd05618 150 --------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 209 (329)
T ss_pred --------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccccc
Confidence 01123468999999999999999999999999999999999999999521 1
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC---CCHHHHHcCCCCCCCChhHHhhh--cCCccCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS---GGASEVKQHVFFKDINWDTLARQ--KAAFVPTS 899 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~---~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~ 899 (1003)
...+++.+..... .+|..++.++.+||.+||++||.+|+++ .++.++++||||++++|+.+... .+++.|..
T Consensus 210 ~~~~~~~i~~~~~---~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~ 286 (329)
T cd05618 210 EDYLFQVILEKQI---RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNI 286 (329)
T ss_pred HHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccCCC
Confidence 2234445555443 3556789999999999999999999954 24789999999999999988654 35666665
Q ss_pred CCCCCCCCcc
Q 001857 900 ESALDTSYFT 909 (1003)
Q Consensus 900 ~s~lDts~F~ 909 (1003)
....+..+|.
T Consensus 287 ~~~~~~~~~~ 296 (329)
T cd05618 287 SGEFGLDNFD 296 (329)
T ss_pred CCcccchhcC
Confidence 5544444443
No 57
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.3e-47 Score=413.50 Aligned_cols=290 Identities=43% Similarity=0.794 Sum_probs=246.6
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++..++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765555556677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||++||+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG---- 156 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC----
Confidence 99999999999976 4579999999999999999999999999999999999999999999999999986311000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.......+||+.|||||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 157 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 157 --------------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred --------------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 001123579999999999973 4578899999999999999999999999
Q ss_pred CChhhHHHhhhccC--CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCCC
Q 001857 823 EHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSE 900 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~--~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~~ 900 (1003)
.+..+.+..+.... ..++.....++.++++||++||+. |.+|++..++.++++||||.+++|..+....++++|...
T Consensus 211 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~-~~~r~~r~~~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~ 289 (331)
T cd05597 211 ESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGRNGLQDFKDHPFFEGIDWDNIRNSTAPYVPEVS 289 (331)
T ss_pred CCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccC-cccccCCCCHHHHhcCCCCCCCCHHHHhhCCCCccCcCC
Confidence 88888888876543 233333446899999999999986 555555459999999999999999999887788888877
Q ss_pred CCCCCCCcc
Q 001857 901 SALDTSYFT 909 (1003)
Q Consensus 901 s~lDts~F~ 909 (1003)
+..+++.|+
T Consensus 290 ~~~~~~~~~ 298 (331)
T cd05597 290 SPTDTSNFD 298 (331)
T ss_pred CcchhhhcC
Confidence 777766664
No 58
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.7e-47 Score=424.16 Aligned_cols=290 Identities=42% Similarity=0.758 Sum_probs=241.4
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
..++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...+|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 34679999999999999999999999999999999987555445555678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||||+||+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+.... .
T Consensus 121 v~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~--~-- 195 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE--T-- 195 (370)
T ss_pred EEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceeccc--C--
Confidence 99999999999999764 689999999999999999999999999999999999999999999999999873100 0
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC----CCccceeechhHHHHHHHhCCCCCCC
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG----HGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~----ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
........+||+.|||||++.+.. ++.++|||||||++|+|++|.+||.+
T Consensus 196 --------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 196 --------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred --------------------------CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 001123568999999999997643 78899999999999999999999999
Q ss_pred CChhhHHHhhhccCC--CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhH--HhhhcCCccCC
Q 001857 823 EHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDT--LARQKAAFVPT 898 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~--~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~--L~~~k~pfvP~ 898 (1003)
.+....+.+++.... .+|. ...++..+++||.+||+. +.+|++..++.++++||||++..|+. +....+++.|.
T Consensus 250 ~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~~L~~-~~~r~~R~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~ 327 (370)
T cd05621 250 DSLVGTYSKIMDHKNSLNFPE-DVEISKHAKNLICAFLTD-REVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPE 327 (370)
T ss_pred CCHHHHHHHHHhCCcccCCCC-cccCCHHHHHHHHHHccC-chhccCCCCHHHHhcCcccCCCCcChHhcCCCCCCcCCC
Confidence 988888888876543 2222 235799999999999984 44444334999999999999866653 33345778887
Q ss_pred CCCCCCCCCcc
Q 001857 899 SESALDTSYFT 909 (1003)
Q Consensus 899 ~~s~lDts~F~ 909 (1003)
.....|.++|.
T Consensus 328 ~~~~~~~~~~~ 338 (370)
T cd05621 328 LSSDIDSSNFD 338 (370)
T ss_pred CCCcchhhhcC
Confidence 77766666664
No 59
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.1e-47 Score=414.39 Aligned_cols=287 Identities=40% Similarity=0.738 Sum_probs=247.8
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||+|+||+||+|+++.+++.||+|++++...........+.+|+.++..++||||+++++.+.+.+.+||||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765545556677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||++||+|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~---- 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK---- 156 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC----
Confidence 999999999999876 689999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc------cCCCCccceeechhHHHHHHHhCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL------GTGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~------g~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
.......+||+.|+|||++. +..++.++|||||||++|||++|..||.
T Consensus 157 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 210 (330)
T cd05601 157 --------------------------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFH 210 (330)
T ss_pred --------------------------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCC
Confidence 00122357999999999987 4567899999999999999999999999
Q ss_pred CCChhhHHHhhhccCC--CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCC
Q 001857 822 AEHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTS 899 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~--~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~ 899 (1003)
..+....+.+++.... .+|. ...++.++.+||++||+ +|.+|| +++++++||||+.++|..+....+++.|..
T Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~li~~ll~-~p~~R~---t~~~l~~h~~~~~~~~~~~~~~~~~~~~~~ 285 (330)
T cd05601 211 EGTSAKTYNNIMNFQRFLKFPE-DPKVSSDFLDLIQSLLC-GQKERL---GYEGLCCHPFFSKIDWNNIRNSLPPFVPTL 285 (330)
T ss_pred CCCHHHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-ChhhCC---CHHHHhCCCCcCCCCHHHHhhCCCCccCcC
Confidence 8888888888776432 2222 23579999999999998 999999 999999999999999999987778888887
Q ss_pred CCCCCCCCccc
Q 001857 900 ESALDTSYFTS 910 (1003)
Q Consensus 900 ~s~lDts~F~s 910 (1003)
....+.++|..
T Consensus 286 ~~~~~~~~~~~ 296 (330)
T cd05601 286 KSDDDTSNFDE 296 (330)
T ss_pred CCcchhhhcCC
Confidence 77666666643
No 60
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.4e-47 Score=414.70 Aligned_cols=284 Identities=43% Similarity=0.842 Sum_probs=241.4
Q ss_pred EEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 594 IKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMI-RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk---~tgk~VALKVIkks~i~-~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
++.||+|+||.||+|++. .+++.||+|++++.... .......+.+|+.+|+.++||||+++++.|...+.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 57889999999875432 22334567889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
|++||+|.+++.+.+.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------- 153 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE------- 153 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-------
Confidence 9999999999998889999999999999999999999999999999999999999999999999998731000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~ 829 (1003)
.......+||+.|+|||++.+..++.++|||||||++|||++|++||...+....+
T Consensus 154 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~ 209 (323)
T cd05584 154 ------------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTI 209 (323)
T ss_pred ------------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHH
Confidence 01123467999999999999998999999999999999999999999998888888
Q ss_pred HhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhhc--CCccCCCCCCCCC
Q 001857 830 DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK--AAFVPTSESALDT 905 (1003)
Q Consensus 830 qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~k--~pfvP~~~s~lDt 905 (1003)
..+...... ++..+++++.+||.+||++||.+||+. .+++++++||||...+|..+.... +++.+...+..+.
T Consensus 210 ~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T cd05584 210 DKILKGKLN---LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEEDV 286 (323)
T ss_pred HHHHcCCCC---CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhcCCCCCCcCCCCCCcchh
Confidence 888776543 456789999999999999999999964 479999999999999998886543 5566655555555
Q ss_pred CCcccc
Q 001857 906 SYFTSR 911 (1003)
Q Consensus 906 s~F~s~ 911 (1003)
+.|...
T Consensus 287 ~~~~~~ 292 (323)
T cd05584 287 SQFDSK 292 (323)
T ss_pred hhcCch
Confidence 555543
No 61
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.1e-47 Score=422.96 Aligned_cols=292 Identities=44% Similarity=0.782 Sum_probs=245.2
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
....++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 34557899999999999999999999999999999999875554455566788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+|||||+||+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++.....
T Consensus 119 ~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~-- 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-- 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC--
Confidence 999999999999999876 45899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC----CCccceeechhHHHHHHHhCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG----HGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~----ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
........+||+.|||||++.+.. ++.++|||||||++|||++|.+||
T Consensus 196 ----------------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf 247 (371)
T cd05622 196 ----------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247 (371)
T ss_pred ----------------------------CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCC
Confidence 001123568999999999997643 789999999999999999999999
Q ss_pred CCCChhhHHHhhhccCC--CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCCh--hHHhhhcCCcc
Q 001857 821 NAEHPQQIFDNILNRKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW--DTLARQKAAFV 896 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~--~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idw--d~L~~~k~pfv 896 (1003)
.+.+....+.+++.... .+|. ...++.++++||.+||. +|..|++..+++++++||||++..| ..+....++++
T Consensus 248 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~h~~~~~~~~~~~~~~~~~~~~~ 325 (371)
T cd05622 248 YADSLVGTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVV 325 (371)
T ss_pred CCCCHHHHHHHHHcCCCcccCCC-cCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhcCcccCCCChhHHhcCCCCCCCC
Confidence 99998888888886543 2332 24689999999999998 6777666569999999999998655 44444567888
Q ss_pred CCCCCCCCCCCcc
Q 001857 897 PTSESALDTSYFT 909 (1003)
Q Consensus 897 P~~~s~lDts~F~ 909 (1003)
|...+..+.++|.
T Consensus 326 ~~~~~~~~~~~~~ 338 (371)
T cd05622 326 PDLSSDIDTSNFD 338 (371)
T ss_pred CCCCCcchhhhcC
Confidence 8776666665553
No 62
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.7e-47 Score=414.12 Aligned_cols=282 Identities=39% Similarity=0.793 Sum_probs=238.1
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHH-HHHhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD-ILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~-IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||+|+||+||+|++..+++.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999998754433333445555554 46778999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~----------- 149 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH----------- 149 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-----------
Confidence 999999998888999999999999999999999999999999999999999999999999998731100
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......+||+.|||||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+.
T Consensus 150 --------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 209 (325)
T cd05602 150 --------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 209 (325)
T ss_pred --------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 011234689999999999999999999999999999999999999999988888888887
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC-CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCCccc
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~-~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~F~s 910 (1003)
..... ++..++..+.+||.+||++||.+|++. ....++++|+||..++|+.+... .+++.|......+...|..
T Consensus 210 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05602 210 NKPLQ---LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDP 286 (325)
T ss_pred hCCcC---CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHhCCCCcCcCCCCCCcchhhhcCC
Confidence 65543 345789999999999999999999965 35679999999999999988754 3566666655555555544
No 63
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.6e-47 Score=421.63 Aligned_cols=290 Identities=41% Similarity=0.720 Sum_probs=245.3
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
...++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...+|
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34578999999999999999999999999999999998765444555567889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
+|||||+||+|.+++.+ ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~--- 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN--- 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC---
Confidence 99999999999999876 46899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC----CCCccceeechhHHHHHHHhCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT----GHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~----~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
........+||+.|||||++.+. .++.++|||||||++|||++|++||.
T Consensus 196 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 248 (370)
T cd05596 196 ---------------------------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (370)
T ss_pred ---------------------------CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcC
Confidence 00112346899999999999764 37899999999999999999999999
Q ss_pred CCChhhHHHhhhccCCC--CCCCCCCCCHHHHHHHHhhccCCcCC--cCCCCCHHHHHcCCCCCCCChhHHh--hhcCCc
Q 001857 822 AEHPQQIFDNILNRKIP--WPRVPEEMSPEAHDLIDRFLTEDPHQ--RLGSGGASEVKQHVFFKDINWDTLA--RQKAAF 895 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~~--~P~lp~~iS~elkDLIrrcL~kDP~k--RPg~~TAeELLqHPFFk~Idwd~L~--~~k~pf 895 (1003)
+.+....+..+...... +|. ...+|.++++||.+||+.+|.+ |+ +++++++||||++.+|.... ...+++
T Consensus 249 ~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~---s~~ell~h~~~~~~~~~~~~~~~~~~~~ 324 (370)
T cd05596 249 ADSLVGTYSKIMDHKNSLTFPD-DIEISKQAKDLICAFLTDREVRLGRN---GVDEIKSHPFFKNDQWTFDNIRETVAPV 324 (370)
T ss_pred CCCHHHHHHHHHcCCCcCCCCC-cCCCCHHHHHHHHHHccChhhccCCC---CHHHHhcCcccCCCChhhHHhcCCCcCc
Confidence 99888888888765432 222 1257999999999999998877 87 99999999999998887543 345788
Q ss_pred cCCCCCCCCCCCccc
Q 001857 896 VPTSESALDTSYFTS 910 (1003)
Q Consensus 896 vP~~~s~lDts~F~s 910 (1003)
+|......++++|+.
T Consensus 325 ~p~~~~~~~~~~~~~ 339 (370)
T cd05596 325 VPELSSDIDTSNFDD 339 (370)
T ss_pred cCcCCCcchhhhcCC
Confidence 888777777666643
No 64
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-48 Score=445.12 Aligned_cols=260 Identities=33% Similarity=0.613 Sum_probs=240.3
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.++-|++.+.||.|+.|.|.+|++..||+..|||++.+...........+.+|+-||+.+.||||+++|+++++..++|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 34669999999999999999999999999999999988755555566788899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|+||++||.|++++.+.|++++.++.++++||+.|+.|||..+|+||||||+|+||+..++|||+|||+|....
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~------ 163 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV------ 163 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997511
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC-CccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.+....+.||+|.|.|||++.|.+| +.++||||.|||||.||||+.||++.+.
T Consensus 164 --------------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi 217 (786)
T KOG0588|consen 164 --------------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI 217 (786)
T ss_pred --------------------------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH
Confidence 1123457899999999999999998 7999999999999999999999999999
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
..++.++..+.+.+| ..+|.++++||++||..||.+|+ |.+||++|||+.+..
T Consensus 218 r~LLlKV~~G~f~MP---s~Is~eaQdLLr~ml~VDp~~Ri---T~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 218 RVLLLKVQRGVFEMP---SNISSEAQDLLRRMLDVDPSTRI---TTEEILKHPFLSGYT 270 (786)
T ss_pred HHHHHHHHcCcccCC---CcCCHHHHHHHHHHhccCccccc---cHHHHhhCchhhcCC
Confidence 999999999988655 78999999999999999999999 999999999998654
No 65
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.4e-47 Score=410.94 Aligned_cols=288 Identities=43% Similarity=0.839 Sum_probs=239.6
Q ss_pred CeEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMI-RKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk---~tgk~VALKVIkks~i~-~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~l 664 (1003)
+|++++.||+|+||+||+|++. .+++.||+|++.+.... .....+.+.+|+.++..+ +||||++++++|...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999874 57899999999865432 233456788899999999 599999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~-- 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE-- 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc--
Confidence 999999999999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
........+||+.|||||++.+. .++.++|||||||++|||++|+.||...
T Consensus 159 ----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 159 ----------------------------EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred ----------------------------CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 00112346899999999999875 4789999999999999999999999643
Q ss_pred C----hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCC--CHHHHHcCCCCCCCChhHHhhh--cCCc
Q 001857 824 H----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAF 895 (1003)
Q Consensus 824 ~----~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~--TAeELLqHPFFk~Idwd~L~~~--k~pf 895 (1003)
. ...+...+.... +.++..+++.+.+||.+||+.||.+||+.+ +++++++||||++++|..+... .+++
T Consensus 211 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~ 287 (332)
T cd05614 211 GERNTQSEVSRRILKCD---PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPF 287 (332)
T ss_pred CCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCc
Confidence 2 333444444433 234567899999999999999999999876 8999999999999999987654 3567
Q ss_pred cCCCCCCCCCCCccc
Q 001857 896 VPTSESALDTSYFTS 910 (1003)
Q Consensus 896 vP~~~s~lDts~F~s 910 (1003)
.|......+...|..
T Consensus 288 ~~~~~~~~~~~~~~~ 302 (332)
T cd05614 288 RPSIRNELDVGNFAE 302 (332)
T ss_pred CCCCCCcchhhhcCc
Confidence 777766666655543
No 66
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.9e-47 Score=412.17 Aligned_cols=281 Identities=42% Similarity=0.801 Sum_probs=238.3
Q ss_pred EEeeccCceEEEEEEE---CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEec
Q 001857 595 KPISRGAFGRVFLAKK---RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYL 671 (1003)
Q Consensus 595 k~LG~G~FGtVyLArd---k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~ 671 (1003)
+.||+|+||.||++++ ..+|+.||+|++.+.... ......+.+|+.+|..++||||+++++++.+.+.+|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 6799999999999987 357899999999875432 223456778999999999999999999999999999999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCC
Q 001857 672 NGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPA 751 (1003)
Q Consensus 672 ~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~ 751 (1003)
+||+|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~--------- 151 (318)
T cd05582 81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--------- 151 (318)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC---------
Confidence 99999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred ccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHh
Q 001857 752 VSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDN 831 (1003)
Q Consensus 752 ~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qk 831 (1003)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..
T Consensus 152 ----------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~ 209 (318)
T cd05582 152 ----------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM 209 (318)
T ss_pred ----------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHH
Confidence 0112346899999999999999999999999999999999999999999888888888
Q ss_pred hhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCC--HHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCC
Q 001857 832 ILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGG--ASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSY 907 (1003)
Q Consensus 832 Il~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~T--AeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~ 907 (1003)
+...... ++..+++++.+||++||++||.+||+... +.++++||||..++|..+... .+++.|......+..+
T Consensus 210 i~~~~~~---~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (318)
T cd05582 210 ILKAKLG---MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGRPDDTFY 286 (318)
T ss_pred HHcCCCC---CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCCCCCCcchhhh
Confidence 8776554 45678999999999999999999995432 889999999999999987654 3566665544444444
Q ss_pred ccc
Q 001857 908 FTS 910 (1003)
Q Consensus 908 F~s 910 (1003)
+.+
T Consensus 287 ~~~ 289 (318)
T cd05582 287 FDP 289 (318)
T ss_pred cCc
Confidence 444
No 67
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.6e-48 Score=436.37 Aligned_cols=256 Identities=35% Similarity=0.616 Sum_probs=235.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+++|.+++.||+|+||.||+|+.+.+.+.||||.+.|... .+..++.+.+|++|++.++|||||.++++|++..++|+|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 3679999999999999999999999999999999988653 345678899999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
+|||.| +|+.++...+.++|+.++.++.+++.||.|||+.+|+|||+||.|||++..|++|+||||+|+....
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~------ 152 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST------ 152 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc------
Confidence 999987 9999999999999999999999999999999999999999999999999999999999999984100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
......+.-|||.|||||++.+.+|+..+|+||||||+|||++|+|||......+
T Consensus 153 -------------------------~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~ 207 (808)
T KOG0597|consen 153 -------------------------NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ 207 (808)
T ss_pred -------------------------CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 0123456789999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
+.+.|+.....+| ...|..+.+||+.+|.+||.+|+ +..+++.|||.++
T Consensus 208 Lv~~I~~d~v~~p---~~~S~~f~nfl~gLL~kdP~~Rl---tW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 208 LVKSILKDPVKPP---STASSSFVNFLQGLLIKDPAQRL---TWTDLLGHPFWKG 256 (808)
T ss_pred HHHHHhcCCCCCc---ccccHHHHHHHHHHhhcChhhcc---cHHHHhcChHHhh
Confidence 9999998877655 48999999999999999999999 9999999999975
No 68
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5.8e-46 Score=396.50 Aligned_cols=277 Identities=34% Similarity=0.601 Sum_probs=233.7
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.|++++.||+|+||+||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++.+...+.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48999999999999999999999999999999976554444445667889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|+.||+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||++++++.++|+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~------ 154 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE------ 154 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC------
Confidence 99999999888654 4699999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 155 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~ 208 (285)
T cd05605 155 --------------------------GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV 208 (285)
T ss_pred --------------------------CCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence 001123579999999999999889999999999999999999999998766543
Q ss_pred HHHhhhccCC-CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCC--CHHHHHcCCCCCCCChhHHhhh--cCCccCC
Q 001857 828 IFDNILNRKI-PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1003)
Q Consensus 828 i~qkIl~~~~-~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~--TAeELLqHPFFk~Idwd~L~~~--k~pfvP~ 898 (1003)
....+..... ..+.++..++..+.+||.+||..||.+||++. +++++++||||...+|+.+... .+||.|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05605 209 KREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCPD 284 (285)
T ss_pred HHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCCC
Confidence 3322221111 11234567899999999999999999999875 8999999999999999988765 3577764
No 69
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-48 Score=413.16 Aligned_cols=250 Identities=31% Similarity=0.560 Sum_probs=222.5
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEe-eeeccc
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFY-SFTCRE 662 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~-~f~d~~ 662 (1003)
....+.+|+++++||+|+||+||+|++..+|+.+|.|.+.-. .......+.+..|+.+|+.|+|||||++|+ .|..++
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ 92 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN 92 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence 345678899999999999999999999999999999999844 445566688999999999999999999998 565555
Q ss_pred e-EEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhh--cC--ceeccCCCcceeecCCCcEEEeec
Q 001857 663 N-LYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHS--LR--VVHRDLKPDNLLIAHDGHIKLTDF 733 (1003)
Q Consensus 663 ~-lyLVmEy~~GGSL~d~L~~~----g~L~Ee~ar~Ia~QIL~ALeYLHs--~G--IIHRDIKPeNILLd~dG~VKLiDF 733 (1003)
. ++||||||.+|+|.++|+.. +.++|..++.|+.|++.||..||. .. |+||||||.||+|+.+|.+||+||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 5 99999999999999999643 569999999999999999999998 45 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001857 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 734 GLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYEL 813 (1003)
||+++... ......+.+|||.||+||++.+.+|+.++|||||||++|||
T Consensus 173 GL~r~l~s-------------------------------~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEM 221 (375)
T KOG0591|consen 173 GLGRFLSS-------------------------------KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEM 221 (375)
T ss_pred hhHhHhcc-------------------------------hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 99995211 11224578999999999999999999999999999999999
Q ss_pred HhCCCCCCCCChhhHHHhhhccCCCCCCCC-CCCCHHHHHHHHhhccCCcCCcCC
Q 001857 814 IVGIPPFNAEHPQQIFDNILNRKIPWPRVP-EEMSPEAHDLIDRFLTEDPHQRLG 867 (1003)
Q Consensus 814 LTGk~PF~~~~~~ei~qkIl~~~~~~P~lp-~~iS~elkDLIrrcL~kDP~kRPg 867 (1003)
..-.+||.+.+..++.++|.++.+ |.+| ..+|.++..||..|+..||..||+
T Consensus 222 caL~~PF~g~n~~~L~~KI~qgd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~ 274 (375)
T KOG0591|consen 222 CALQSPFYGDNLLSLCKKIEQGDY--PPLPDEHYSTDLRELINMCIAVDPEQRPD 274 (375)
T ss_pred HhcCCCcccccHHHHHHHHHcCCC--CCCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence 999999999999999999988854 5666 679999999999999999999994
No 70
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4e-45 Score=393.04 Aligned_cols=304 Identities=49% Similarity=0.913 Sum_probs=257.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||.|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++.+...+++|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46999999999999999999999999999999988765444455678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~- 159 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL- 159 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc-
Confidence 9999999999998888899999999999999999999999999999999999999999999999999874221111000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.... .. ............|++.|+|||.+.+..++.++|+|||||++|||++|..||.+.+..+.
T Consensus 160 ---------~~~~---~~---~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~ 224 (305)
T cd05609 160 ---------YEGH---IE---KDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL 224 (305)
T ss_pred ---------cccc---cc---cchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0000 00 00001112245789999999999988899999999999999999999999998888888
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCCCCCCCCCCc
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESALDTSYF 908 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~~s~lDts~F 908 (1003)
+..+......+|.....++.++.+||.+||++||.+||++.++.++++||||...+|....+....++|......+.+||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (305)
T cd05609 225 FGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLRQKAEFIPQLESEDDTSYF 304 (305)
T ss_pred HHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHHHhhcCCCCCCCCCCccccccC
Confidence 88887776666655557899999999999999999999877799999999999999999988888888888777777665
No 71
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.4e-46 Score=394.77 Aligned_cols=267 Identities=34% Similarity=0.654 Sum_probs=224.8
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCCh
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL 676 (1003)
||+|+||+||+|.++.+++.||+|++.+.........+.+..|+.+++.++||||++++++|.....+|+||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999999999999999876554444556788999999999999999999999999999999999999999
Q ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001857 677 YSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1003)
Q Consensus 677 ~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~ 752 (1003)
..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~---------- 150 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG---------- 150 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC----------
Confidence 988743 356999999999999999999999999999999999999999999999999998631000
Q ss_pred cCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh----hhH
Q 001857 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP----QQI 828 (1003)
Q Consensus 753 s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~----~ei 828 (1003)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...
T Consensus 151 ---------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~ 209 (280)
T cd05608 151 ---------------------QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 209 (280)
T ss_pred ---------------------CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHH
Confidence 0012245799999999999999999999999999999999999999976543 223
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhhc--CCccC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK--AAFVP 897 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~k--~pfvP 897 (1003)
...+.... ..++..++.++.+||.+||+.||.+||+. .+++++++||||++++|..+.... +|+.|
T Consensus 210 ~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~ 279 (280)
T cd05608 210 KQRILNDS---VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP 279 (280)
T ss_pred HHhhcccC---CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCC
Confidence 33333322 23456789999999999999999999976 378999999999999999886543 34444
No 72
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=414.69 Aligned_cols=260 Identities=34% Similarity=0.606 Sum_probs=221.0
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc--eEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE--NLY 665 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~--~ly 665 (1003)
..+|...+.||+|+||.||++.+..+|..+|+|.+..... ...+.+.+|+.+|..++|||||++++...... .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS---PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccc---hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 3568899999999999999999999999999999876521 12677899999999999999999999755555 699
Q ss_pred EEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-CCcEEEeecCCccccccCC
Q 001857 666 LVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~~ 743 (1003)
++|||++||+|.+++.+.+ .+++..++.|.+||+.||+|||++|||||||||+|||++. +|.+||+|||+++....
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~-- 170 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES-- 170 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc--
Confidence 9999999999999999987 7999999999999999999999999999999999999999 79999999999884110
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.. ..........|||.|||||++.+ ...++++|||||||++.||+||++||..
T Consensus 171 ~~--------------------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 171 KG--------------------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred cc--------------------------ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 00 00112345789999999999995 2334599999999999999999999987
Q ss_pred -CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 823 -EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 823 -~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.......-.+.... ..|.+|..+|.++++||.+||.+||.+|| ||.++|+|||.+.
T Consensus 225 ~~~~~~~~~~ig~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rp---ta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 225 FFEEAEALLLIGRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRP---TAEELLEHPFLKQ 281 (313)
T ss_pred hcchHHHHHHHhccC-CCCCCCcccCHHHHHHHHHHhhcCcccCc---CHHHHhhChhhhc
Confidence 34444444444333 45788999999999999999999999999 9999999999975
No 73
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-46 Score=420.85 Aligned_cols=274 Identities=35% Similarity=0.655 Sum_probs=231.6
Q ss_pred CCCCCCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-----------HHHHHHHHHHHHHHhcC
Q 001857 579 IHPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-----------NAVESILAERDILISVR 647 (1003)
Q Consensus 579 ~~Psk~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~-----------~~ie~~lrEi~IL~~L~ 647 (1003)
+.+......++.|++++.||+|.||+|-+|++..+++.||||++.|...... ..++.+.+|+.||++++
T Consensus 87 ~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~ 166 (576)
T KOG0585|consen 87 YDDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH 166 (576)
T ss_pred ecCcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC
Confidence 3445566788999999999999999999999999999999999987543321 22468899999999999
Q ss_pred CCcEEEEEeeeecc--ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC
Q 001857 648 NPFVVRFFYSFTCR--ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD 725 (1003)
Q Consensus 648 HPNIVkL~~~f~d~--~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d 725 (1003)
|||||+|+++..+. +++|||+|||..|.+...-.....+++.+++.|++.++.||+|||.+|||||||||+|+||+.+
T Consensus 167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD 246 (576)
T ss_pred CcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCC
Confidence 99999999998874 5799999999988875433222239999999999999999999999999999999999999999
Q ss_pred CcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC---C-Cccc
Q 001857 726 GHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG---H-GTTA 801 (1003)
Q Consensus 726 G~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~---y-s~kS 801 (1003)
|+|||+|||.+...... ..+. ........+|||.|||||.+.+.. + +.+.
T Consensus 247 g~VKIsDFGVs~~~~~~-----------------~~~~---------~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~ 300 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQG-----------------SDEG---------SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFAL 300 (576)
T ss_pred CcEEeeccceeeecccC-----------------Cccc---------cHHHHhhcCCCccccchHhhcCCCCccccchhh
Confidence 99999999998641100 0000 001122379999999999998732 2 6789
Q ss_pred eeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 802 DWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 802 DIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
|||||||+||.|+.|+.||.+....+++.+|++....+|..+ .+.+.++|||.+||++||.+|+ +..+|+.|||..
T Consensus 301 DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~p-e~~e~~kDli~~lL~KdP~~Ri---~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 301 DIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENP-EINEDLKDLIKRLLEKDPEQRI---TLPDIKLHPWVT 376 (576)
T ss_pred hhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcc-cccHHHHHHHHHHhhcChhhee---ehhhheecceec
Confidence 999999999999999999999999999999999999888764 6889999999999999999999 999999999986
Q ss_pred C
Q 001857 882 D 882 (1003)
Q Consensus 882 ~ 882 (1003)
.
T Consensus 377 ~ 377 (576)
T KOG0585|consen 377 R 377 (576)
T ss_pred c
Confidence 3
No 74
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.1e-47 Score=406.58 Aligned_cols=259 Identities=25% Similarity=0.477 Sum_probs=219.9
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
++.|+.+.++|+|+||.||+|+++.||+.||||.+.-+. .+....+..++|+++|++++|||+|.|+++|..+..++||
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 367999999999999999999999999999999986543 3344556788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
+|||+. ++.+-+.+. ..++++.++.|+.|++.|+.|+|+++||||||||+||||+.+|.+||||||+|+...
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~------ 152 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLS------ 152 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhc------
Confidence 999987 555556554 569999999999999999999999999999999999999999999999999998411
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
. .+...+.++.|.+|+|||.+.| ..|+.++||||+||++.||++|.+.|.+.+.
T Consensus 153 --~-----------------------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD 207 (396)
T KOG0593|consen 153 --A-----------------------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD 207 (396)
T ss_pred --C-----------------------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch
Confidence 0 0122345789999999999998 7899999999999999999999999998877
Q ss_pred hhHHHhhhccC-------------------CCCCCC---------CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 826 QQIFDNILNRK-------------------IPWPRV---------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 826 ~ei~qkIl~~~-------------------~~~P~l---------p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
-+.+..|...- ..+|.. ...++.-+.||+++||..||.+|+ +.++++.|
T Consensus 208 iDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~---sc~qll~H 284 (396)
T KOG0593|consen 208 IDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRL---SCEQLLHH 284 (396)
T ss_pred HHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccc---cHHHHhcC
Confidence 66555554311 112221 124678899999999999999999 99999999
Q ss_pred CCCCC
Q 001857 878 VFFKD 882 (1003)
Q Consensus 878 PFFk~ 882 (1003)
+||.+
T Consensus 285 ~yFd~ 289 (396)
T KOG0593|consen 285 PYFDG 289 (396)
T ss_pred hHHHH
Confidence 99964
No 75
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=7.3e-45 Score=387.76 Aligned_cols=284 Identities=48% Similarity=0.881 Sum_probs=250.3
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++.+...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46999999999999999999999999999999998766555566788999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||+++++|.+++...+.+++..+..++.||+.||.|||++||+|+||+|+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~------- 153 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG------- 153 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC-------
Confidence 9999999999999888999999999999999999999999999999999999999999999999999873100
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.....+|++.|+|||.+.+..++.++||||||+++|+|++|..||...+....
T Consensus 154 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 206 (290)
T cd05580 154 ---------------------------RTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI 206 (290)
T ss_pred ---------------------------CCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 01235789999999999988899999999999999999999999998887777
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALD 904 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lD 904 (1003)
.+.+...... ++..++..++++|.+||+.||.+|++. .+++++++||||+.++|..+... .+++.|......+
T Consensus 207 ~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (290)
T cd05580 207 YEKILEGKVR---FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVKGPGD 283 (290)
T ss_pred HHHHhcCCcc---CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCCCCccc
Confidence 7777765543 456789999999999999999999975 38999999999999999988765 3677777666666
Q ss_pred CCCcc
Q 001857 905 TSYFT 909 (1003)
Q Consensus 905 ts~F~ 909 (1003)
.+.|+
T Consensus 284 ~~~~~ 288 (290)
T cd05580 284 TSNFD 288 (290)
T ss_pred ccccc
Confidence 66553
No 76
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-47 Score=396.39 Aligned_cols=261 Identities=35% Similarity=0.686 Sum_probs=243.2
Q ss_pred CCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 583 k~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
.....+++|++.+.||+|-||.||+|+.+.++-.||+|++.|+.+.......++.+|++|-..|+||||+++|++|.+..
T Consensus 16 ~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 16 TKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred ccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 34567899999999999999999999999999999999999998877777788999999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLR--NLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~--~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
.+||++||..+|+|+..+. ....+++..+..|++|++.||.|+|.++||||||||+|+|++..|.+||+|||-+...
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~- 174 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA- 174 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec-
Confidence 9999999999999999998 6678999999999999999999999999999999999999999999999999988631
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
...+..+.|||..|.+||+..+..++..+|+|++|++.||++.|.+||
T Consensus 175 --------------------------------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppF 222 (281)
T KOG0580|consen 175 --------------------------------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPF 222 (281)
T ss_pred --------------------------------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCch
Confidence 012356789999999999999999999999999999999999999999
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
...+..++|++|.+....+| ..++.+++|||.+||.++|.+|+ ...|++.|||...
T Consensus 223 es~~~~etYkrI~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~---~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 223 ESQSHSETYKRIRKVDLKFP---STISGGAADLISRLLVKNPIERL---ALTEVMDHPWIVA 278 (281)
T ss_pred hhhhhHHHHHHHHHccccCC---cccChhHHHHHHHHhccCccccc---cHHHHhhhHHHHh
Confidence 99999999999999887655 78999999999999999999999 9999999999864
No 77
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-45 Score=414.75 Aligned_cols=260 Identities=38% Similarity=0.648 Sum_probs=237.3
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyL 666 (1003)
.+.|++.+.||.|.||.||+|+.+.+|+.||+|++.+.........+.+.+|+.+|+.+. |||||.++++|++...+|+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 346999999999999999999999999999999999887766556688999999999998 9999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC----CcEEEeecCCccccccC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD----GHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d----G~VKLiDFGLAk~~~~~ 742 (1003)
|||+|.||+|++.+.+. .+++..+..++.||+.|+.|||+.||+||||||+|+|+... +.+|++|||+|+...
T Consensus 114 vmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~-- 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK-- 190 (382)
T ss_pred EEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc--
Confidence 99999999999999876 49999999999999999999999999999999999999643 579999999998521
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
........||||.|+|||++...+|+..+||||+||++|.|++|.+||.+
T Consensus 191 ------------------------------~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~ 240 (382)
T KOG0032|consen 191 ------------------------------PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWG 240 (382)
T ss_pred ------------------------------CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcC
Confidence 01235578999999999999999999999999999999999999999999
Q ss_pred CChhhHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 823 EHPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
.+....+.+|..+.+.++. ....+|..+++||++||..||.+|+ ++.++|+|||+++.
T Consensus 241 ~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~---ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 241 ETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRL---TAAQALQHPWIKSI 299 (382)
T ss_pred CChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCC---CHHHHhcCccccCC
Confidence 9999999999998887663 3567899999999999999999999 99999999998864
No 78
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.3e-45 Score=387.82 Aligned_cols=258 Identities=31% Similarity=0.468 Sum_probs=215.0
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||+||+|+++.+++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 469999999999999999999999999999999976532 2334567789999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++++.|..+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 154 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS----- 154 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc-----
Confidence 999998777666555679999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
........||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+.
T Consensus 155 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~ 209 (287)
T cd07848 155 -------------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ 209 (287)
T ss_pred -------------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0011235799999999999998899999999999999999999999987665444
Q ss_pred HHhhhccCC-------------------CCCC----------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 829 FDNILNRKI-------------------PWPR----------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 829 ~qkIl~~~~-------------------~~P~----------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
...+..... .++. ....+|.++.+||++||++||.+|| +++++++|||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~---s~~~~l~hp~ 286 (287)
T cd07848 210 LFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRY---LTEQCLNHPA 286 (287)
T ss_pred HHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCC---CHHHHhcCCC
Confidence 333322110 1111 1123788999999999999999999 9999999999
Q ss_pred C
Q 001857 880 F 880 (1003)
Q Consensus 880 F 880 (1003)
|
T Consensus 287 f 287 (287)
T cd07848 287 F 287 (287)
T ss_pred C
Confidence 8
No 79
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-47 Score=400.88 Aligned_cols=259 Identities=32% Similarity=0.553 Sum_probs=234.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+.|++.+.||+|.|+.|+++.++.+|+.+|+|++........ ..+.+.+|+.|-+.|+||||++|++.+......|||+
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 459999999999999999999999999999999976655444 5678999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC---CcEEEeecCCccccccCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD---GHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d---G~VKLiDFGLAk~~~~~~~d 745 (1003)
|+|.|++|..-|-..-.++|..+..+++||+.||.|+|.+||||||+||+|+|+... .-+||+|||+|....
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~----- 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN----- 164 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-----
Confidence 999999998877666778999999999999999999999999999999999999653 469999999998310
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.+.....++|||.|||||+++..+|+..+|||+-|||||-||.|.+||.+.+.
T Consensus 165 ---------------------------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~ 217 (355)
T KOG0033|consen 165 ---------------------------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 217 (355)
T ss_pred ---------------------------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH
Confidence 11223468999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 826 QQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
..+|++|+.+.+.++. ....+++++++||++||..||.+|+ |+.|.|+|||+.+-
T Consensus 218 ~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRI---ta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 218 HRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRI---TADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhc---cHHHHhCCchhcch
Confidence 9999999999998875 6788999999999999999999999 99999999999853
No 80
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-47 Score=422.64 Aligned_cols=259 Identities=32% Similarity=0.490 Sum_probs=222.2
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc-e
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRE-N 663 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~-~ 663 (1003)
...++|.++++||.|+||.||+|+.+.+|..||||.+++....-+ .-.-++|+.-|++|+ ||||++|++++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e--e~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH--HHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 345789999999999999999999999999999999987543322 234468999999999 999999999999988 9
Q ss_pred EEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 664 LYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
+|+|||||+. +|+++++.. ..|++..++.|+.||+.||+|+|++|++||||||||||+..+..|||+|||+|+....
T Consensus 85 L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S- 162 (538)
T KOG0661|consen 85 LYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS- 162 (538)
T ss_pred EeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc-
Confidence 9999999965 999999765 5699999999999999999999999999999999999999999999999999994211
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
....+.++.|.+|+|||++.. ..|+.++|+||+|||++|+.+-++.|.
T Consensus 163 -------------------------------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP 211 (538)
T KOG0661|consen 163 -------------------------------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP 211 (538)
T ss_pred -------------------------------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC
Confidence 112345789999999999875 558999999999999999999999999
Q ss_pred CCChhhHHHhhhc-------------------cCCCCCCC--------CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 822 AEHPQQIFDNILN-------------------RKIPWPRV--------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 822 ~~~~~ei~qkIl~-------------------~~~~~P~l--------p~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
|.+..+.+.+|+. -.+.+|.. -..++.++.+||.+||.+||.+|| ||.++
T Consensus 212 G~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRp---TA~~a 288 (538)
T KOG0661|consen 212 GASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRP---TASQA 288 (538)
T ss_pred CCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCc---cHHHH
Confidence 9887777666654 11223322 234899999999999999999999 99999
Q ss_pred HcCCCCCC
Q 001857 875 KQHVFFKD 882 (1003)
Q Consensus 875 LqHPFFk~ 882 (1003)
|+||||+.
T Consensus 289 l~~pffq~ 296 (538)
T KOG0661|consen 289 LQHPFFQV 296 (538)
T ss_pred hcCccccc
Confidence 99999984
No 81
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.5e-44 Score=386.25 Aligned_cols=275 Identities=35% Similarity=0.647 Sum_probs=230.0
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++.+.+.+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 38889999999999999999999999999999877654444455677889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~------ 154 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE------ 154 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC------
Confidence 99999999998654 3589999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh-
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ- 826 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~- 826 (1003)
........||+.|+|||++.+..++.++|||||||++|+|++|.+||......
T Consensus 155 --------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~ 208 (285)
T cd05630 155 --------------------------GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 208 (285)
T ss_pred --------------------------CccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence 00112347999999999999999999999999999999999999999865432
Q ss_pred --hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCC
Q 001857 827 --QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1003)
Q Consensus 827 --ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~ 898 (1003)
.....+..... ..++..+++++.+||.+||+.||.+||++ ++++++++||||+.++|..+... +|+|+|.
T Consensus 209 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05630 209 KREEVERLVKEVQ--EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKPD 284 (285)
T ss_pred hHHHHHhhhhhhh--hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCCC
Confidence 12222222111 23456789999999999999999999943 23999999999999999987653 4677774
No 82
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-46 Score=422.70 Aligned_cols=258 Identities=34% Similarity=0.583 Sum_probs=233.1
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
.....|....+||+|+.|.||.|+...+++.||+|.+....... .+.+++|+.+|+..+|+|||++++.|-..+.++
T Consensus 270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLW 346 (550)
T KOG0578|consen 270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELW 346 (550)
T ss_pred ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeE
Confidence 34466889999999999999999999999999999998765332 367889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
+|||||+||+|.+++... .++|.++..+.++++.||+|||.+||||||||.+|||++.+|.+||+|||+|.....
T Consensus 347 VVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~---- 421 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE---- 421 (550)
T ss_pred EEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc----
Confidence 999999999999999764 599999999999999999999999999999999999999999999999999874211
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
...+..+.+|||+|||||++....|++++||||||++++||+.|.+||-..++
T Consensus 422 ---------------------------~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P 474 (550)
T KOG0578|consen 422 ---------------------------EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP 474 (550)
T ss_pred ---------------------------ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh
Confidence 11245678999999999999999999999999999999999999999998888
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
...+..|.....+-...++.+|++++|||.+||+.|+.+|+ +|.|||+||||+
T Consensus 475 lrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra---sA~eLL~HpFl~ 527 (550)
T KOG0578|consen 475 LRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRA---SAKELLEHPFLK 527 (550)
T ss_pred HHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCC---CHHHHhcChhhh
Confidence 88888888777655566889999999999999999999999 999999999995
No 83
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.8e-45 Score=388.40 Aligned_cols=257 Identities=27% Similarity=0.508 Sum_probs=214.7
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.+++|++++.||.|+||+||+|++..++..||+|+++.... ......+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 35789999999999999999999999999999999875432 1223467789999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
||||++| +|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--- 156 (288)
T cd07871 81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--- 156 (288)
T ss_pred EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---
Confidence 9999975 9999987654 5799999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 157 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 157 ----------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred ----------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 001123578999999999876 568999999999999999999999998877
Q ss_pred hhhHHHhhhccCC-------------------CCCC--------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 825 PQQIFDNILNRKI-------------------PWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 825 ~~ei~qkIl~~~~-------------------~~P~--------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
..+....+..... .+|. ....++.++++||.+||++||.+|| |++|+++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~---t~~~~l~h 285 (288)
T cd07871 209 VKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRI---SAEAALRH 285 (288)
T ss_pred HHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCC---CHHHHhcC
Confidence 6665554432110 0111 1124688999999999999999999 99999999
Q ss_pred CCC
Q 001857 878 VFF 880 (1003)
Q Consensus 878 PFF 880 (1003)
|||
T Consensus 286 p~f 288 (288)
T cd07871 286 SYF 288 (288)
T ss_pred CCC
Confidence 998
No 84
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-44 Score=384.74 Aligned_cols=267 Identities=32% Similarity=0.603 Sum_probs=220.5
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCCh
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL 676 (1003)
||+|+||.||+++++.+|+.||+|++.+...........+..|+++++.++||||+++++.+....++|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999999999999999999765544333445567799999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001857 677 YSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1003)
Q Consensus 677 ~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ 754 (1003)
.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~------------- 147 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD------------- 147 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCC-------------
Confidence 99886543 588999999999999999999999999999999999999999999999999873100
Q ss_pred cccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh----hhHHH
Q 001857 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP----QQIFD 830 (1003)
Q Consensus 755 ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~----~ei~q 830 (1003)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .++..
T Consensus 148 -------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05607 148 -------------------GKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR 208 (277)
T ss_pred -------------------CceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH
Confidence 0011234689999999999998899999999999999999999999976432 33344
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCC-CHHHHHcCCCCCCCChhHHhhh--cCCccC
Q 001857 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG-GASEVKQHVFFKDINWDTLARQ--KAAFVP 897 (1003)
Q Consensus 831 kIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~-TAeELLqHPFFk~Idwd~L~~~--k~pfvP 897 (1003)
.+......+ ....++.++++||.+||++||.+||+.. -.++++.||||+.++|..+... .+||+|
T Consensus 209 ~~~~~~~~~--~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05607 209 RTLEDEVKF--EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFVP 276 (277)
T ss_pred Hhhcccccc--ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCCCCCCC
Confidence 444333222 2246899999999999999999999321 1278899999999999988765 355554
No 85
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.6e-44 Score=384.26 Aligned_cols=305 Identities=41% Similarity=0.788 Sum_probs=245.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.++..++||||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 46999999999999999999999999999999998766555556678999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 669 EYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
||+.|++|.+++... ..+++..++.++.||+.||+|||+.||+|+||||+||+++.++.++|+|||++.........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~- 159 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP- 159 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc-
Confidence 999999999999764 56999999999999999999999999999999999999999999999999998742111000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
................. ................+||..|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 160 VSKALRKGSRRSSVNSI-PSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ccccccccccccccccc-chhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 00000000000000000 00000001112234568999999999999998999999999999999999999999988888
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCC----HHHHHcCCCCCCCChhHHhhhcCCccCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGG----ASEVKQHVFFKDINWDTLARQKAAFVPTS 899 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~T----AeELLqHPFFk~Idwd~L~~~k~pfvP~~ 899 (1003)
..+..+......++.. ..++.++.+||.+||++||.+|| + ++++++||||++.+|..+....+|.+|.+
T Consensus 239 ~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~---s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 311 (316)
T cd05574 239 ETFSNILKKEVTFPGS-PPVSSSARDLIRKLLVKDPSKRL---GSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRP 311 (316)
T ss_pred HHHHHHhcCCccCCCc-cccCHHHHHHHHHHccCCHhHCC---CchhhHHHHHcCchhhcCChhhcccCCCCCCCCc
Confidence 8887777666554432 23799999999999999999999 7 99999999999999999988777777654
No 86
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.8e-44 Score=380.60 Aligned_cols=277 Identities=34% Similarity=0.603 Sum_probs=232.4
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.|+..+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+|+.++|+||+.+++.+...+.+|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 37889999999999999999999999999999987654444445667889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~------ 154 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE------ 154 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC------
Confidence 99999999888654 3699999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.....
T Consensus 155 --------------------------~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~ 208 (285)
T cd05632 155 --------------------------GESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV 208 (285)
T ss_pred --------------------------CCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001123579999999999999899999999999999999999999998766544
Q ss_pred HHHhhhccCCC-CCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCC
Q 001857 828 IFDNILNRKIP-WPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1003)
Q Consensus 828 i~qkIl~~~~~-~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~ 898 (1003)
....+...... ...++..++.++.+||.+||+.||.+||++ ..+.++++|+||+.++|+.+... .++|+|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05632 209 KREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVPD 284 (285)
T ss_pred HHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCCC
Confidence 33333221111 123456789999999999999999999943 13899999999999999987654 4677775
No 87
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.9e-44 Score=387.57 Aligned_cols=262 Identities=29% Similarity=0.543 Sum_probs=212.1
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++++.||+|+||.||+|+++.+++.||||++..... ......+.+|+.+++.++||||+++++++.+...+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 3679999999999999999999999999999999875432 12234567899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---- 156 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP---- 156 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC----
Confidence 99996 5888887654 57899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+...
T Consensus 157 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 209 (303)
T cd07869 157 ---------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD 209 (303)
T ss_pred ---------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 001123578999999999876 4578999999999999999999999986432
Q ss_pred -hhHHHhhhccC-C----CCC------CC---------C---------CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 826 -QQIFDNILNRK-I----PWP------RV---------P---------EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 826 -~ei~qkIl~~~-~----~~P------~l---------p---------~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
......+.... . .++ .+ + ...++.+.+||.+||++||.+|| |+.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~---s~~~~l 286 (303)
T cd07869 210 IQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRL---SAQAAL 286 (303)
T ss_pred HHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhcc---CHHHHh
Confidence 22222222100 0 000 00 0 12457899999999999999999 999999
Q ss_pred cCCCCCCCChh
Q 001857 876 QHVFFKDINWD 886 (1003)
Q Consensus 876 qHPFFk~Idwd 886 (1003)
+||||+++.+.
T Consensus 287 ~h~~f~~~~~~ 297 (303)
T cd07869 287 SHEYFSDLPPR 297 (303)
T ss_pred cCcccccCChh
Confidence 99999988653
No 88
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.5e-44 Score=389.64 Aligned_cols=263 Identities=29% Similarity=0.457 Sum_probs=212.7
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----ceE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-----ENL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~-----~~l 664 (1003)
+|++.+.||+|+||.||+|++..++..||||++..... .......+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 48999999999999999999999999999999875322 223345688999999999999999999887543 358
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 99999995 69999998888899999999999999999999999999999999999999999999999999873110000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
........+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+
T Consensus 159 ----------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 159 ----------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred ----------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 0011234689999999999876 6789999999999999999999999987
Q ss_pred CChhhHHHhhhc--------------------------cCC--CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 823 EHPQQIFDNILN--------------------------RKI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 823 ~~~~ei~qkIl~--------------------------~~~--~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
.+.......+.. ... ++......+++.+.+||.+||+.||.+|| +++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~e~ 287 (338)
T cd07859 211 KNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRP---TAEEA 287 (338)
T ss_pred CChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCC---CHHHH
Confidence 654332221111 000 01111134678899999999999999999 99999
Q ss_pred HcCCCCCCCCh
Q 001857 875 KQHVFFKDINW 885 (1003)
Q Consensus 875 LqHPFFk~Idw 885 (1003)
++||||+++..
T Consensus 288 l~hp~f~~~~~ 298 (338)
T cd07859 288 LADPYFKGLAK 298 (338)
T ss_pred hcCchhhhcCc
Confidence 99999987543
No 89
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-45 Score=411.04 Aligned_cols=260 Identities=33% Similarity=0.577 Sum_probs=225.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLY 665 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~ly 665 (1003)
.+.|+.+++||+|+||.||+|++..+|+.||+|.+..... +......+.+|+.||++|+||||++|.+...+. ..+|
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 4569999999999999999999999999999999987543 344567788999999999999999999998887 6899
Q ss_pred EEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||+|||+. +|.-++...+ .|++.+++.|+.||+.||+|||.+||+|||||.+|||||.+|.+||+|||||++......
T Consensus 195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 99999987 9999998754 699999999999999999999999999999999999999999999999999996322111
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
...++.+-|.+|.|||.|+| ..|+.++|+||.||||.||++|++.|.+.
T Consensus 274 ------------------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~ 323 (560)
T KOG0600|consen 274 ------------------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR 323 (560)
T ss_pred ------------------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc
Confidence 12346789999999999998 56999999999999999999999999999
Q ss_pred ChhhHHHhhhccCCC-----CC--CCC-------------------CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 824 HPQQIFDNILNRKIP-----WP--RVP-------------------EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~-----~P--~lp-------------------~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
+..+.+..|.+.... |+ .+| ..++..+.+|+..||+.||.+|. ||.++|+|
T Consensus 324 tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~---tA~~aL~s 400 (560)
T KOG0600|consen 324 TEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRG---TASSALQS 400 (560)
T ss_pred cHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccc---cHHHHhcC
Confidence 998888888762211 11 111 34789999999999999999999 99999999
Q ss_pred CCCCC
Q 001857 878 VFFKD 882 (1003)
Q Consensus 878 PFFk~ 882 (1003)
+||..
T Consensus 401 eyF~t 405 (560)
T KOG0600|consen 401 EYFTT 405 (560)
T ss_pred ccccc
Confidence 99953
No 90
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-43 Score=386.83 Aligned_cols=258 Identities=28% Similarity=0.487 Sum_probs=218.8
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++++.||+|+||.||+|++..++..||+|++.... .......+.+|+.+|+.++||||+++++++...+.+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 478999999999999999999999999999999987542 234456789999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc-CceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL-RVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~-GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||++||+|.+++...+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----- 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----- 156 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-----
Confidence 99999999999999888899999999999999999999986 699999999999999999999999999863100
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 157 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ----------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0112357999999999999999999999999999999999999999766554
Q ss_pred hHHHhhhcc--------------------------------------------CCCCCCC-CCCCCHHHHHHHHhhccCC
Q 001857 827 QIFDNILNR--------------------------------------------KIPWPRV-PEEMSPEAHDLIDRFLTED 861 (1003)
Q Consensus 827 ei~qkIl~~--------------------------------------------~~~~P~l-p~~iS~elkDLIrrcL~kD 861 (1003)
++...+... ....+.. ...+++++++||.+||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~ 288 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN 288 (331)
T ss_pred HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC
Confidence 432211100 0000111 1247889999999999999
Q ss_pred cCCcCCCCCHHHHHcCCCCCCC
Q 001857 862 PHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 862 P~kRPg~~TAeELLqHPFFk~I 883 (1003)
|++|| ++.+|++||||+..
T Consensus 289 P~~Rp---t~~ell~h~~~~~~ 307 (331)
T cd06649 289 PAERA---DLKMLMNHTFIKRS 307 (331)
T ss_pred cccCC---CHHHHhcChHHhhc
Confidence 99999 99999999999854
No 91
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.9e-45 Score=400.07 Aligned_cols=253 Identities=31% Similarity=0.612 Sum_probs=236.0
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
.+|++.+.||+|.||+|-+|+....|+.||||.|+|..+..+..+-++.+|++||..|+||||+.+|++|+..+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 46999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||..+|+|++++.+.+.+++.+++.+++||+.|+.|||+++++|||||.+|||+|.|+++||+||||+...
T Consensus 133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly--------- 203 (668)
T KOG0611|consen 133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLY--------- 203 (668)
T ss_pred EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhh---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999998631
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC-CccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
.......++||+|.|.+||++.|.+| ++.+|-||||++||.|..|..||++.+...
T Consensus 204 -----------------------~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~ 260 (668)
T KOG0611|consen 204 -----------------------ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR 260 (668)
T ss_pred -----------------------ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH
Confidence 11123457999999999999999998 789999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+..+|-.+.+.-|. -+..+.-||+.||-.||++|- |+++|..|=|.
T Consensus 261 lvrQIs~GaYrEP~----~PSdA~gLIRwmLmVNP~RRA---TieDiAsHWWv 306 (668)
T KOG0611|consen 261 LVRQISRGAYREPE----TPSDASGLIRWMLMVNPERRA---TIEDIASHWWV 306 (668)
T ss_pred HHHHhhcccccCCC----CCchHHHHHHHHHhcCcccch---hHHHHhhhhee
Confidence 99999988876554 456789999999999999998 99999999876
No 92
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-44 Score=396.94 Aligned_cols=268 Identities=32% Similarity=0.530 Sum_probs=232.1
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
-...++|++...||.|..++||+|+.+.++.+||||++...+.... ++.+.+|+..|..++||||++++..|..+..+
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~L 99 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCSFVVDSEL 99 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEEEEeccee
Confidence 3456789999999999999999999999999999999987665333 78899999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 665 YLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
|+||.||.+|++.++++.. ..++|..+..++++++.||.|||.+|.||||||+.||||+.+|.|||+|||.+-....
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~- 178 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD- 178 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecc-
Confidence 9999999999999999865 4599999999999999999999999999999999999999999999999998763110
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
+|. .. .....+++|||.|||||+++. .+|+.|+||||||++..||.+|..||
T Consensus 179 ----------~G~---------------R~-~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf 232 (516)
T KOG0582|consen 179 ----------SGD---------------RQ-VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPF 232 (516)
T ss_pred ----------cCc---------------ee-eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCc
Confidence 000 00 111267899999999999654 67999999999999999999999999
Q ss_pred CCCChhhHHHhhhccCCCCCCC-------CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 821 NAEHPQQIFDNILNRKIPWPRV-------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~l-------p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
....+.+++-.-+++..+.+.. ...++..++.+|..||++||.+|| +|.++|+|+||+...
T Consensus 233 ~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRp---tAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 233 SKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRP---TASKLLKHAFFKKAK 300 (516)
T ss_pred ccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCC---CHHHHhccHHHhhcc
Confidence 9998888877777766653321 124678899999999999999999 999999999998653
No 93
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.6e-43 Score=373.86 Aligned_cols=255 Identities=32% Similarity=0.519 Sum_probs=208.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECC-CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeee-----
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRT-TGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFT----- 659 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~-tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L---~HPNIVkL~~~f~----- 659 (1003)
++|++++.||+|+||+||+|++.. +++.||+|++...... ......+.+|..+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 369999999999999999999854 5788999998754322 12223455677777655 6999999999885
Q ss_pred ccceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcc
Q 001857 660 CRENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1003)
Q Consensus 660 d~~~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1003)
....+|+||||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 2456999999996 5999998754 458999999999999999999999999999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCC
Q 001857 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGI 817 (1003)
Q Consensus 738 ~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk 817 (1003)
.... ........||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 159 ~~~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 206 (290)
T cd07862 159 IYSF--------------------------------QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 206 (290)
T ss_pred eccC--------------------------------CcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCC
Confidence 3100 01123457999999999999989999999999999999999999
Q ss_pred CCCCCCChhhHHHhhhccCC-----CCC-------------------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHH
Q 001857 818 PPFNAEHPQQIFDNILNRKI-----PWP-------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1003)
Q Consensus 818 ~PF~~~~~~ei~qkIl~~~~-----~~P-------------------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeE 873 (1003)
+||.+.+..+.+..+..... .++ .+...+++.+++||.+||+.||++|| ++.+
T Consensus 207 ~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---s~~~ 283 (290)
T cd07862 207 PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI---SAYS 283 (290)
T ss_pred CCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcC---CHHH
Confidence 99998887777766654211 010 11135788899999999999999999 9999
Q ss_pred HHcCCCC
Q 001857 874 VKQHVFF 880 (1003)
Q Consensus 874 LLqHPFF 880 (1003)
+++||||
T Consensus 284 ~l~hp~f 290 (290)
T cd07862 284 ALSHPYF 290 (290)
T ss_pred HhcCCCC
Confidence 9999998
No 94
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=5.4e-43 Score=365.17 Aligned_cols=257 Identities=60% Similarity=1.066 Sum_probs=223.7
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHH-HhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDIL-ISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL-~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
+.||.|+||.||+|.+..+++.||+|++.+...........+..|..++ ...+||||+++++.+...+.+|+||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5699999999999999999999999999776544444444555665554 445899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
++|.+++...+.+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||+++...
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~------------- 148 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL------------- 148 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceecc-------------
Confidence 9999999988889999999999999999999999999999999999999999999999999987310
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
......|++.|+|||.+.+..++.++||||||+++|+|++|.+||...+....+..+.
T Consensus 149 ----------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 206 (260)
T cd05611 149 ----------------------ENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL 206 (260)
T ss_pred ----------------------ccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 0123568899999999998889999999999999999999999999888888887777
Q ss_pred ccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChh
Q 001857 834 NRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD 886 (1003)
Q Consensus 834 ~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd 886 (1003)
.....++. ....+++++.++|.+||+.+|.+||+..+++|++.||||++++|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 207 SRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINWD 260 (260)
T ss_pred hcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence 66554442 334689999999999999999999987788999999999999996
No 95
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.1e-42 Score=417.97 Aligned_cols=320 Identities=51% Similarity=0.912 Sum_probs=263.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+++|+++++||+|+||+||+|++..+++.||||++++...........+.+|+.++..++||||+++++.+....++|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 57899999999999999999999999999999999877666666678889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC-
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD- 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd- 746 (1003)
|||+.|++|.+++...+.+++..++.|+.||+.||+|||.+|||||||||+||||+.++++||+|||+++.........
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~~~ 162 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMM 162 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCccccc
Confidence 9999999999999888889999999999999999999999999999999999999999999999999997421100000
Q ss_pred --C-----------------------------------------------------------------------------
Q 001857 747 --L----------------------------------------------------------------------------- 747 (1003)
Q Consensus 747 --l----------------------------------------------------------------------------- 747 (1003)
.
T Consensus 163 ~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (669)
T cd05610 163 DILTTPSMAKPKNDYSRTPGQVLSLISSLGFNTPVGEKDQGSVNSGQNNGTSSVRTGTSHPLLMINKESLPMSLKLSKSC 242 (669)
T ss_pred ccccCccccCccccccCCCCceeeeeeecCcCCccccccccccccccccccccccccCCCCcccccccccccccHhhhhc
Confidence 0
Q ss_pred --------CCCC--ccC------------------------------c--------------------------------
Q 001857 748 --------SGPA--VSG------------------------------T-------------------------------- 755 (1003)
Q Consensus 748 --------s~p~--~s~------------------------------t-------------------------------- 755 (1003)
..+. ... +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (669)
T cd05610 243 LETSESSPSLPVRSLTPNLLKSRKRPEASTSSTHSCMTNSLSSCESECCSSNLKLLEQASSPSQSPRWSVDEGNIISEGE 322 (669)
T ss_pred cccccCCCCCCccccCcccccccccCCcccccchhhhhhhhhhccccccCcchhhhhhccCCCCCccccccCCCCccccc
Confidence 0000 000 0
Q ss_pred ------------------------------------------------------------------ccCC----------
Q 001857 756 ------------------------------------------------------------------TLLG---------- 759 (1003)
Q Consensus 756 ------------------------------------------------------------------tl~g---------- 759 (1003)
...+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (669)
T cd05610 323 KSEKGSVKRSFELVEKSPCQELLQSKKTNAEYKRGCSITETNGNQSTGLTMEIQSLNLSKHKSRPKFLAGNEKRTGPKKK 402 (669)
T ss_pred ccccCCccccccccccChHHHHhcccccccccccceeeccccccccccceeecchhhhhhhhcCchhhhccccccCcccC
Confidence 0000
Q ss_pred ----------CC----------------C----------------ccch-------hh----h---h-------------
Q 001857 760 ----------DE----------------E----------------PQLT-------AS----E---H------------- 770 (1003)
Q Consensus 760 ----------~~----------------~----------------~~lt-------~~----~---~------------- 770 (1003)
.. . ...+ .+ . .
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (669)
T cd05610 403 SNPVVAKNLMCELDDDGEKDGKYSNSSTSCGDDREIVLKLSLNSDSSFPEMSKNAVAFRSYNSPINVSNVSEPSTMSSLD 482 (669)
T ss_pred CCcchhhhhhccccccccccCCccccccccCccHHHhhhhhhccccccccccccceeeeccCchhhccccCCCCcccccc
Confidence 00 0 0000 00 0 0
Q ss_pred h-----------------h-------------------------------hhhccccccCCCCCCCchhhccCCCCccce
Q 001857 771 Q-----------------Q-------------------------------ERRKKRSAVGTPDYLAPEILLGTGHGTTAD 802 (1003)
Q Consensus 771 ~-----------------~-------------------------------~~~~~~s~vGTp~YmAPEVL~g~~ys~kSD 802 (1003)
. . ........+||+.|||||++.+..|+.++|
T Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~D 562 (669)
T cd05610 483 AMKMSGSQSGSYPAITPTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVD 562 (669)
T ss_pred hhhccccccCCCcccCCCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHH
Confidence 0 0 000012347899999999999999999999
Q ss_pred eechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 803 WWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 803 IWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
||||||+||||++|++||.+....+.+..++.....++.....++..+.+++.+||..||.+|| ++.++++||||..
T Consensus 563 iwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~---ta~e~l~h~~~~~ 639 (669)
T cd05610 563 WWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRA---GLKELKQHPLFHG 639 (669)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCc---CHHHHHhCHhhcC
Confidence 9999999999999999999999999999998887777776678899999999999999999999 9999999999999
Q ss_pred CChhHHhhhcCCccCCCCCCCCCCCccc
Q 001857 883 INWDTLARQKAAFVPTSESALDTSYFTS 910 (1003)
Q Consensus 883 Idwd~L~~~k~pfvP~~~s~lDts~F~s 910 (1003)
++|..+.....+|.|......|+.||+.
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (669)
T cd05610 640 VDWENLQNQTMPFIPQPDDETDTSYFEA 667 (669)
T ss_pred CCHHHhcccCCCCCCCCCCccccccccc
Confidence 9999999888999998888888888764
No 96
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.7e-45 Score=384.36 Aligned_cols=261 Identities=30% Similarity=0.523 Sum_probs=233.1
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc-----ccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-----IRKNAVESILAERDILISV-RNPFVVRFFYSFTCR 661 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i-----~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~ 661 (1003)
...|+..+.||.|..++|..|.++.+|+.+|+|++..... ......+....|+.||+++ .||+|+++.++|+++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 3568888899999999999999999999999999864321 1234456677899999987 699999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
..+++|+|.|+.|.|++++...-.++|...+.+|+||+.|++|||.++||||||||+|||++++.+|||+|||+|...
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l-- 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL-- 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc--
Confidence 999999999999999999999889999999999999999999999999999999999999999999999999998731
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc------CCCCccceeechhHHHHHHHh
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG------TGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g------~~ys~kSDIWSLGVILYELLT 815 (1003)
..+.+.+..||||+|+|||.+.. .+|+..+|+||+|||||.||.
T Consensus 174 ------------------------------~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa 223 (411)
T KOG0599|consen 174 ------------------------------EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA 223 (411)
T ss_pred ------------------------------CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc
Confidence 12344567899999999999863 568999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
|.+||......-++..|+.+++.|.. -+.++|...+|||.+||+.||.+|+ |++|+|+||||..+
T Consensus 224 GcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ri---take~LaHpff~q~ 289 (411)
T KOG0599|consen 224 GCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRI---TAKEALAHPFFIQI 289 (411)
T ss_pred CCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcc---cHHHHhcChHHHHH
Confidence 99999999999999999999988753 3568999999999999999999999 99999999999643
No 97
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.5e-42 Score=361.00 Aligned_cols=260 Identities=32% Similarity=0.543 Sum_probs=223.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI--RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~--~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
++|++.+.||.|+||.||+|.+..+++.||+|++...... .......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5699999999999999999999999999999998754322 22345678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
||||++|++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||+++......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~--- 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC--- 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc---
Confidence 99999999999999988889999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
..........|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 159 -------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 213 (263)
T cd06625 159 -------------------------SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM 213 (263)
T ss_pred -------------------------cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH
Confidence 0000112456889999999999988999999999999999999999999877666
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.....+..... .+.++..++..+.+||.+||.++|.+|| ++.++++||||
T Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~ 263 (263)
T cd06625 214 AAIFKIATQPT-NPQLPSHVSPDARNFLRRTFVENAKKRP---SAEELLRHFFV 263 (263)
T ss_pred HHHHHHhccCC-CCCCCccCCHHHHHHHHHHhhcCcccCC---CHHHHhhCCCC
Confidence 55555544333 2446678999999999999999999999 99999999998
No 98
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.4e-43 Score=368.97 Aligned_cols=254 Identities=30% Similarity=0.496 Sum_probs=206.9
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeeec-----c
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFTC-----R 661 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L---~HPNIVkL~~~f~d-----~ 661 (1003)
+|++++.||+|+||+||+|+++.+++.||+|+++..... ......+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 489999999999999999999999999999998754321 11123445677766654 79999999998865 3
Q ss_pred ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccc
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1003)
..+|+||||+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 458999999975 899988764 35899999999999999999999999999999999999999999999999998731
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~P 819 (1003)
.. ........||+.|+|||++.+..++.++|||||||++|+|++|.+|
T Consensus 159 ~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~ 206 (288)
T cd07863 159 SC--------------------------------QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 206 (288)
T ss_pred cC--------------------------------cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcC
Confidence 00 0011235789999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHhhhccC-----CCCC-------------------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 820 FNAEHPQQIFDNILNRK-----IPWP-------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 820 F~~~~~~ei~qkIl~~~-----~~~P-------------------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
|.+......+.++.... ..++ .....++..+.+||.+||++||.+|| ++.+++
T Consensus 207 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~~~l 283 (288)
T cd07863 207 FCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRI---SAFRAL 283 (288)
T ss_pred cCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCC---CHHHHh
Confidence 98877666555554311 0000 11235788899999999999999999 999999
Q ss_pred cCCCC
Q 001857 876 QHVFF 880 (1003)
Q Consensus 876 qHPFF 880 (1003)
.||||
T Consensus 284 ~hp~f 288 (288)
T cd07863 284 QHPFF 288 (288)
T ss_pred cCCCC
Confidence 99998
No 99
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-43 Score=393.41 Aligned_cols=252 Identities=32% Similarity=0.544 Sum_probs=217.2
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCE-EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-eE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDL-FAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-NL 664 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~-VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~-~l 664 (1003)
..++..+.+.||.|+||+||+|.++ |.. ||+|++......... .+.+.+|+.+|.+++|||||++++++.... .+
T Consensus 39 ~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~ 115 (362)
T KOG0192|consen 39 DPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSL 115 (362)
T ss_pred ChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCce
Confidence 3455677777999999999999985 444 999999876654444 789999999999999999999999999988 79
Q ss_pred EEEEEeccCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcC-ceeccCCCcceeecCCC-cEEEeecCCccccc
Q 001857 665 YLVMEYLNGGDLYSLLRN--LGCLDEDVARVYIAEVVLALEYLHSLR-VVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGL 740 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~--~g~L~Ee~ar~Ia~QIL~ALeYLHs~G-IIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~ 740 (1003)
+|||||+++|+|..++.+ .+.++...+..++.||+.||+|||+++ ||||||||+|||++.++ ++||+|||+++...
T Consensus 116 ~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeec
Confidence 999999999999999987 578999999999999999999999999 99999999999999998 99999999998511
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc--cCCCCccceeechhHHHHHHHhCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL--GTGHGTTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~--g~~ys~kSDIWSLGVILYELLTGk~ 818 (1003)
.. ........||+.|||||++. ...|+.++||||||++||||+||+.
T Consensus 196 ~~-------------------------------~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~ 244 (362)
T KOG0192|consen 196 IS-------------------------------KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI 244 (362)
T ss_pred cc-------------------------------cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC
Confidence 00 01122368999999999999 5689999999999999999999999
Q ss_pred CCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 819 PFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 819 PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
||.+....++...+..... .|.+|..+++.+..||.+||..||.+|| +..+++.
T Consensus 245 Pf~~~~~~~~~~~v~~~~~-Rp~~p~~~~~~l~~l~~~CW~~dp~~RP---~f~ei~~ 298 (362)
T KOG0192|consen 245 PFEDLAPVQVASAVVVGGL-RPPIPKECPPHLSSLMERCWLVDPSRRP---SFLEIVS 298 (362)
T ss_pred CCCCCCHHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHhCCCCCCcCC---CHHHHHH
Confidence 9999888777666664443 4667788999999999999999999999 6655543
No 100
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.4e-42 Score=367.26 Aligned_cols=266 Identities=36% Similarity=0.697 Sum_probs=224.0
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCCh
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL 676 (1003)
||+|+||+||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++.+...+.+|+||||++|++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999999875544444556778899999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccC
Q 001857 677 YSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1003)
Q Consensus 677 ~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ 754 (1003)
.+++.+.+ .+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~------------- 147 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG------------- 147 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-------------
Confidence 99997765 799999999999999999999999999999999999999999999999999863100
Q ss_pred cccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh----hhHHH
Q 001857 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP----QQIFD 830 (1003)
Q Consensus 755 ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~----~ei~q 830 (1003)
........|+..|+|||++.+..++.++|||||||++|+|++|+.||..... ..+..
T Consensus 148 -------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05577 148 -------------------GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR 208 (277)
T ss_pred -------------------CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence 0011234688899999999988899999999999999999999999976544 22333
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC-C-CHHHHHcCCCCCCCChhHHhhh--cCCccC
Q 001857 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS-G-GASEVKQHVFFKDINWDTLARQ--KAAFVP 897 (1003)
Q Consensus 831 kIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~-~-TAeELLqHPFFk~Idwd~L~~~--k~pfvP 897 (1003)
.+.... ..++..+++.+.++|.+||+.||.+||+. . ++.++++||||+.++|..+... .++|.|
T Consensus 209 ~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05577 209 RTLEMA---VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIP 276 (277)
T ss_pred cccccc---ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcCCCCCCCCC
Confidence 332222 23456789999999999999999999976 3 7899999999999999988654 245544
No 101
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.3e-43 Score=386.86 Aligned_cols=261 Identities=29% Similarity=0.455 Sum_probs=217.8
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----eE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-----NL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~-----~l 664 (1003)
+|++++.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++...+ .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 5889999999999999999999999999999986532 22334567889999999999999999999998876 79
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~- 157 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE- 157 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc-
Confidence 99999996 5899999888889999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
........||+.|+|||++.+. .++.++|||||||++|||++|++||.+.
T Consensus 158 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 158 -----------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred -----------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 0111235689999999999874 4799999999999999999999999887
Q ss_pred ChhhHHHhhhcc-----------------------CCCCC------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 824 HPQQIFDNILNR-----------------------KIPWP------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 824 ~~~ei~qkIl~~-----------------------~~~~P------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
+..+.+..+... ....+ .+....++++.+||.+||+.||.+|| ++.++
T Consensus 209 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~---t~~e~ 285 (372)
T cd07853 209 SPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRI---SAADA 285 (372)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCc---CHHHH
Confidence 766655544321 11111 12345688999999999999999999 99999
Q ss_pred HcCCCCCCCCh
Q 001857 875 KQHVFFKDINW 885 (1003)
Q Consensus 875 LqHPFFk~Idw 885 (1003)
++||||++..+
T Consensus 286 l~hp~~~~~~~ 296 (372)
T cd07853 286 LAHPYLDEGRL 296 (372)
T ss_pred hcCHhhCCCcc
Confidence 99999998654
No 102
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.9e-43 Score=394.81 Aligned_cols=256 Identities=27% Similarity=0.371 Sum_probs=209.9
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
+....+|++++.||+|+||.||+|++..+++.||+|+... ..+.+|+.+|+.++||||++++++|......
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 158 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFT 158 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCee
Confidence 3445679999999999999999999999999999996432 3467899999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+|||++. ++|..++...+.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.....
T Consensus 159 ~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~-- 235 (391)
T PHA03212 159 CLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI-- 235 (391)
T ss_pred EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc--
Confidence 99999995 699999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........+||+.|+|||++.+..|+.++|||||||++|||++|..||....
T Consensus 236 ----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~ 287 (391)
T PHA03212 236 ----------------------------NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKD 287 (391)
T ss_pred ----------------------------cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcc
Confidence 0011234689999999999999999999999999999999999998875321
Q ss_pred -------hhhHHHhhhccCCC--------------------------CCC-C-----CCCCCHHHHHHHHhhccCCcCCc
Q 001857 825 -------PQQIFDNILNRKIP--------------------------WPR-V-----PEEMSPEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 825 -------~~ei~qkIl~~~~~--------------------------~P~-l-----p~~iS~elkDLIrrcL~kDP~kR 865 (1003)
....+..+...... .+. . ...++.++.+||.+||++||.+|
T Consensus 288 ~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~R 367 (391)
T PHA03212 288 GLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHR 367 (391)
T ss_pred cccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhC
Confidence 11111111111000 000 0 01346789999999999999999
Q ss_pred CCCCCHHHHHcCCCCCCC
Q 001857 866 LGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 866 Pg~~TAeELLqHPFFk~I 883 (1003)
| ||.|+|+||||+.+
T Consensus 368 p---ta~elL~hp~f~~~ 382 (391)
T PHA03212 368 P---SAEALLDFAAFQDI 382 (391)
T ss_pred C---CHHHHhcChhhccC
Confidence 9 99999999999864
No 103
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.6e-43 Score=386.03 Aligned_cols=257 Identities=30% Similarity=0.482 Sum_probs=211.8
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
...+++|++++.||+|+||+||+|++..+++.||||++.... .......+.+|+.+++.++|+||+++++++...+.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 345678999999999999999999999999999999986542 234456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||+.+|+|... ...++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 148 ~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~-- 221 (353)
T PLN00034 148 QVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT-- 221 (353)
T ss_pred EEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc--
Confidence 999999999998643 34577888899999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHhCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~kSDIWSLGVILYELLTGk~P 819 (1003)
.......+||+.|+|||++.. ..++.++|||||||++|||++|+.|
T Consensus 222 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~p 272 (353)
T PLN00034 222 -----------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFP 272 (353)
T ss_pred -----------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCC
Confidence 011224579999999999853 2345789999999999999999999
Q ss_pred CCCCChhhH---HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 820 FNAEHPQQI---FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 820 F~~~~~~ei---~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
|......+. ...+... ..+..+..++.++++||.+||+.||.+|| ++.|+++||||..-
T Consensus 273 f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~P~~Rp---t~~ell~hp~~~~~ 334 (353)
T PLN00034 273 FGVGRQGDWASLMCAICMS--QPPEAPATASREFRHFISCCLQREPAKRW---SAMQLLQHPFILRA 334 (353)
T ss_pred CCCCCCccHHHHHHHHhcc--CCCCCCCccCHHHHHHHHHHccCChhhCc---CHHHHhcCcccccC
Confidence 974333222 2222211 12345567899999999999999999999 99999999999863
No 104
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.3e-43 Score=373.65 Aligned_cols=258 Identities=32% Similarity=0.564 Sum_probs=221.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|..+++||+|.||.||+|++..||+.||||.++..+. ........++|+..|+.++|+||+.++++|.....+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-KDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-ccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 468899999999999999999999999999999987643 2223356789999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||+. +|...|+.. -.++..+++.|+.+++.||+|||++.|+||||||.|+||+.+|.+||+|||+|+......
T Consensus 81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~---- 155 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN---- 155 (318)
T ss_pred Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC----
Confidence 99976 999999765 569999999999999999999999999999999999999999999999999999532110
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
......+-|.+|.|||.+.| ..|+..+|+||.|||+.||+-|.|-|.+.+.-
T Consensus 156 ---------------------------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi 208 (318)
T KOG0659|consen 156 ---------------------------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI 208 (318)
T ss_pred ---------------------------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence 11123388999999999998 45999999999999999999999999998887
Q ss_pred hHHHhhhccCC-----CCCC--------------------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 827 QIFDNILNRKI-----PWPR--------------------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 827 ei~qkIl~~~~-----~~P~--------------------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
+.+..|..... .||+ +....+.++.||+.+||..||.+|+ ++.|+++|+||+
T Consensus 209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Ri---ta~qaL~~~yf~ 285 (318)
T KOG0659|consen 209 DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRI---TASQALKHPYFK 285 (318)
T ss_pred HHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcc---cHHHHhcchhhh
Confidence 77777765211 1221 1124678899999999999999999 999999999998
Q ss_pred C
Q 001857 882 D 882 (1003)
Q Consensus 882 ~ 882 (1003)
+
T Consensus 286 ~ 286 (318)
T KOG0659|consen 286 S 286 (318)
T ss_pred c
Confidence 5
No 105
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.6e-43 Score=400.06 Aligned_cols=255 Identities=29% Similarity=0.437 Sum_probs=208.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------ 661 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~------ 661 (1003)
..+|++++.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.++||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 357999999999999999999999999999999886432 2234799999999999999998876432
Q ss_pred --ceEEEEEEeccCCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC-cEEEeecC
Q 001857 662 --ENLYLVMEYLNGGDLYSLLR----NLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFG 734 (1003)
Q Consensus 662 --~~lyLVmEy~~GGSL~d~L~----~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFG 734 (1003)
..+|+||||+++ +|.+++. ....+++..++.|+.||+.||.|||++|||||||||+|||++.++ .+||+|||
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 257899999975 7777764 346799999999999999999999999999999999999999765 69999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHH
Q 001857 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 735 LAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYEL 813 (1003)
+|+.... .......+||+.|||||++.+. .|+.++|||||||++|||
T Consensus 217 la~~~~~--------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el 264 (440)
T PTZ00036 217 SAKNLLA--------------------------------GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEM 264 (440)
T ss_pred cchhccC--------------------------------CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence 9973110 0112246789999999998764 689999999999999999
Q ss_pred HhCCCCCCCCChhhHHHhhhccC-----------------CCCCC---------CCCCCCHHHHHHHHhhccCCcCCcCC
Q 001857 814 IVGIPPFNAEHPQQIFDNILNRK-----------------IPWPR---------VPEEMSPEAHDLIDRFLTEDPHQRLG 867 (1003)
Q Consensus 814 LTGk~PF~~~~~~ei~qkIl~~~-----------------~~~P~---------lp~~iS~elkDLIrrcL~kDP~kRPg 867 (1003)
++|.+||.+.+..+.+.++.... ..+|. +|...++++.+||.+||++||.+||
T Consensus 265 ltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~- 343 (440)
T PTZ00036 265 ILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRL- 343 (440)
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCc-
Confidence 99999999887666555554311 11111 2345788999999999999999999
Q ss_pred CCCHHHHHcCCCCCCCCh
Q 001857 868 SGGASEVKQHVFFKDINW 885 (1003)
Q Consensus 868 ~~TAeELLqHPFFk~Idw 885 (1003)
++.|+++||||.++..
T Consensus 344 --ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 344 --NPIEALADPFFDDLRD 359 (440)
T ss_pred --CHHHHhCChhHHhhhc
Confidence 9999999999987543
No 106
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.5e-42 Score=368.13 Aligned_cols=261 Identities=39% Similarity=0.685 Sum_probs=213.2
Q ss_pred EeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHH---hcCCCcEEEEEeeeeccceEEEEEEecc
Q 001857 596 PISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILI---SVRNPFVVRFFYSFTCRENLYLVMEYLN 672 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~---~L~HPNIVkL~~~f~d~~~lyLVmEy~~ 672 (1003)
.||+|+||.||+|.+..+++.||+|++.+.............+|..++. ..+||||+.+++.+...+.+|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999997654433333333444544433 3479999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001857 673 GGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1003)
Q Consensus 673 GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~ 752 (1003)
||+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~----------- 149 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----------- 149 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccc-----------
Confidence 999999998888899999999999999999999999999999999999999999999999999862100
Q ss_pred cCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-cCCCCccceeechhHHHHHHHhCCCCCCCCCh---hhH
Q 001857 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-GTGHGTTADWWSVGIILFELIVGIPPFNAEHP---QQI 828 (1003)
Q Consensus 753 s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~---~ei 828 (1003)
.......||+.|+|||++. +..++.++|||||||++|+|++|..||..... ..+
T Consensus 150 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 207 (279)
T cd05633 150 ----------------------KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207 (279)
T ss_pred ----------------------cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHH
Confidence 0012346999999999987 46689999999999999999999999975432 222
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhhc
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQK 892 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~k 892 (1003)
........ +.++..++.++.+||.+||..||.+|+++ .++.++++||||++++|.....++
T Consensus 208 ~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 270 (279)
T cd05633 208 DRMTLTVN---VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQK 270 (279)
T ss_pred HHHhhcCC---cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhcCC
Confidence 11111111 24567789999999999999999999954 369999999999999999876554
No 107
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.3e-42 Score=374.41 Aligned_cols=260 Identities=27% Similarity=0.522 Sum_probs=214.9
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.+++|++++.||+|+||+||+|+++.+++.||+|+++.... ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence 35789999999999999999999999999999999875432 2223456789999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
||||+.+ +|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 157 (309)
T cd07872 82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP--- 157 (309)
T ss_pred EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCC---
Confidence 9999975 888888665 45899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 158 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 209 (309)
T cd07872 158 ----------------------------TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST 209 (309)
T ss_pred ----------------------------ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 001123468999999999875 458999999999999999999999998877
Q ss_pred hhhHHHhhhccC-------------------CCCCC--------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 825 PQQIFDNILNRK-------------------IPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 825 ~~ei~qkIl~~~-------------------~~~P~--------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
..+....+.... ..++. ....+++++++||.+||+.||.+|| |+.|+++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~e~l~h 286 (309)
T cd07872 210 VEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRI---SAEEAMKH 286 (309)
T ss_pred hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCC---CHHHHhcC
Confidence 655544443210 01111 1134788999999999999999999 99999999
Q ss_pred CCCCCC
Q 001857 878 VFFKDI 883 (1003)
Q Consensus 878 PFFk~I 883 (1003)
|||+.+
T Consensus 287 ~~~~~~ 292 (309)
T cd07872 287 AYFRSL 292 (309)
T ss_pred hhhhhc
Confidence 999864
No 108
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-42 Score=379.59 Aligned_cols=256 Identities=30% Similarity=0.523 Sum_probs=216.9
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++.++||.|+||.||+|++..++..+|+|++.... .......+.+|+.+++.++||||++++++|.+.+.+|+|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 468999999999999999999999999999999987542 234456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc-CceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL-RVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~-GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||++||+|.+++.+.+.+++..+..++.||+.||.|||+. +|+||||||+|||++.+|.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~----- 156 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----- 156 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh-----
Confidence 99999999999999888899999999999999999999975 799999999999999999999999999863100
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred ----------------------------hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 0112357999999999999988999999999999999999999999765443
Q ss_pred hHHHh--------------------------------------------hhccCCCCCCCC-CCCCHHHHHHHHhhccCC
Q 001857 827 QIFDN--------------------------------------------ILNRKIPWPRVP-EEMSPEAHDLIDRFLTED 861 (1003)
Q Consensus 827 ei~qk--------------------------------------------Il~~~~~~P~lp-~~iS~elkDLIrrcL~kD 861 (1003)
.+... +.+.. .+.++ ..++.++++||.+||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~~ 286 (333)
T cd06650 209 ELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEP--PPKLPSGVFGAEFQDFVNKCLIKN 286 (333)
T ss_pred HHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCC--CccCCCCCcCHHHHHHHHHhccCC
Confidence 32111 11111 01111 236789999999999999
Q ss_pred cCCcCCCCCHHHHHcCCCCCCC
Q 001857 862 PHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 862 P~kRPg~~TAeELLqHPFFk~I 883 (1003)
|.+|| ++.|+++||||+..
T Consensus 287 P~~Rp---t~~ell~h~~~~~~ 305 (333)
T cd06650 287 PAERA---DLKQLMVHAFIKRS 305 (333)
T ss_pred cccCc---CHHHHhhCHHHhcC
Confidence 99999 99999999999853
No 109
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1e-42 Score=399.68 Aligned_cols=253 Identities=25% Similarity=0.409 Sum_probs=204.5
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC------CCcEEEEEeeeecc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR------NPFVVRFFYSFTCR 661 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~------HPNIVkL~~~f~d~ 661 (1003)
.++|+++++||+|+||+||+|.+..+++.||||+++... ........|+.++..++ |++|++++++|...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 467999999999999999999999999999999986532 12234456777766664 45689999888765
Q ss_pred -ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCC-------------
Q 001857 662 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDG------------- 726 (1003)
Q Consensus 662 -~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG------------- 726 (1003)
.++|||||++ |++|.+++.+.+.+++..++.++.||+.||+|||+ .|||||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 5789999988 77999999888899999999999999999999997 5999999999999998765
Q ss_pred ---cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCcccee
Q 001857 727 ---HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADW 803 (1003)
Q Consensus 727 ---~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDI 803 (1003)
.+||+|||++... .......+||+.|||||++.+..|+.++||
T Consensus 283 ~~~~vkl~DfG~~~~~----------------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~~Di 328 (467)
T PTZ00284 283 DPCRVRICDLGGCCDE----------------------------------RHSRTAIVSTRHYRSPEVVLGLGWMYSTDM 328 (467)
T ss_pred CCceEEECCCCccccC----------------------------------ccccccccCCccccCcHHhhcCCCCcHHHH
Confidence 4999999987520 011234689999999999999999999999
Q ss_pred echhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCC------------------------C-C--------------C
Q 001857 804 WSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPR------------------------V-P--------------E 844 (1003)
Q Consensus 804 WSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~------------------------l-p--------------~ 844 (1003)
|||||++|||++|++||.+.+..+....+......+|. . + .
T Consensus 329 wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (467)
T PTZ00284 329 WSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV 408 (467)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh
Confidence 99999999999999999887765544433221111110 0 0 0
Q ss_pred CCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 845 EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 845 ~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
..++.+.|||.+||++||.+|| +++|+|+||||..
T Consensus 409 ~~~~~~~dli~~mL~~dP~~R~---ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 409 IRDDLLCDLIYGLLHYDRQKRL---NARQMTTHPYVLK 443 (467)
T ss_pred hchHHHHHHHHHhCCcChhhCC---CHHHHhcCccccc
Confidence 1245678999999999999999 9999999999975
No 110
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-42 Score=381.59 Aligned_cols=257 Identities=27% Similarity=0.470 Sum_probs=210.4
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc----
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE---- 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~---- 662 (1003)
.+++|++++.||+|+||.||+|++..+|+.||+|++.+... .......+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 45789999999999999999999999999999999876432 2344567789999999999999999999986543
Q ss_pred --eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 663 --NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 663 --~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
.+|+||||+.+ +|.+.+.. .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 57999999975 67776643 48899999999999999999999999999999999999999999999999987310
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 175 ~--------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf 222 (359)
T cd07876 175 T--------------------------------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 222 (359)
T ss_pred c--------------------------------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 0 00122357899999999999999999999999999999999999999
Q ss_pred CCCChhhHHHhhhcc----------------------CCCCCC-----------------CCCCCCHHHHHHHHhhccCC
Q 001857 821 NAEHPQQIFDNILNR----------------------KIPWPR-----------------VPEEMSPEAHDLIDRFLTED 861 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~----------------------~~~~P~-----------------lp~~iS~elkDLIrrcL~kD 861 (1003)
.+.+....+..+... ...++. .....++++++||.+||+.|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 302 (359)
T cd07876 223 QGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVID 302 (359)
T ss_pred CCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccC
Confidence 876654433322211 111110 11124678999999999999
Q ss_pred cCCcCCCCCHHHHHcCCCCCC
Q 001857 862 PHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 862 P~kRPg~~TAeELLqHPFFk~ 882 (1003)
|.+|| ++.|+++||||..
T Consensus 303 P~~R~---t~~e~l~hp~~~~ 320 (359)
T cd07876 303 PDKRI---SVDEALRHPYITV 320 (359)
T ss_pred cccCC---CHHHHhcCchhhh
Confidence 99999 9999999999974
No 111
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=403.35 Aligned_cols=258 Identities=32% Similarity=0.583 Sum_probs=232.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
..|..+..||+|+||.||+|.+..+++.||+|++.... .+..++.+..|+.+|..++++||.++|+.|.....++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 34888899999999999999999999999999998654 3456788999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|||.||++.+.++..+.+.+..+..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||.+-..
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql--------- 161 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQL--------- 161 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeee---------
Confidence 99999999999998887899999999999999999999999999999999999999999999999998631
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.....++.+++|||.|||||++...+|+.++||||||++.|||++|.+||....+..+
T Consensus 162 ----------------------~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv 219 (467)
T KOG0201|consen 162 ----------------------TNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV 219 (467)
T ss_pred ----------------------echhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE
Confidence 0112344789999999999999999999999999999999999999999999888776
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
+..|-+..+ |.+...+|+.+++||..||.+||+.|| +|.++|+|+|++...
T Consensus 220 lflIpk~~P--P~L~~~~S~~~kEFV~~CL~k~P~~Rp---sA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 220 LFLIPKSAP--PRLDGDFSPPFKEFVEACLDKNPEFRP---SAKELLKHKFIKRAK 270 (467)
T ss_pred EEeccCCCC--CccccccCHHHHHHHHHHhhcCcccCc---CHHHHhhhHHHHhcC
Confidence 666655443 566678999999999999999999999 999999999998743
No 112
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.4e-42 Score=359.56 Aligned_cols=257 Identities=40% Similarity=0.804 Sum_probs=223.8
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCCh
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL 676 (1003)
||.|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.++||||+++++.+.+...+|++|||++|++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999999999999999876655555667899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcc
Q 001857 677 YSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTT 756 (1003)
Q Consensus 677 ~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~tt 756 (1003)
.+++.+...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||+++....
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~--------------- 145 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS--------------- 145 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCc---------------
Confidence 99999888899999999999999999999999999999999999999999999999999873100
Q ss_pred cCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC--hhhHHHhhhc
Q 001857 757 LLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH--PQQIFDNILN 834 (1003)
Q Consensus 757 l~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~--~~ei~qkIl~ 834 (1003)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||.... ....+..+..
T Consensus 146 -----------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 208 (262)
T cd05572 146 -----------------GQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK 208 (262)
T ss_pred -----------------ccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc
Confidence 001223578999999999988889999999999999999999999998766 6666777664
Q ss_pred cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChh
Q 001857 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWD 886 (1003)
Q Consensus 835 ~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd 886 (1003)
... .+..+...++++.+||.+||+.+|.+||+. .++.|+++||||++.+|+
T Consensus 209 ~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 209 GNG-KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred cCC-CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 222 234556678999999999999999999931 239999999999999986
No 113
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4e-42 Score=366.44 Aligned_cols=266 Identities=32% Similarity=0.571 Sum_probs=227.0
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+.|++++.||.|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++.+.....+|+||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 5699999999999999999999999999999998754 2445677889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||++|++|..++.+ ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~----- 163 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT----- 163 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc-----
Confidence 99999999988765 457899999999999999999999999999999999999999999999999987631000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
........|++.|+|||++. ...++.++|||||||++|+|++|.+||..
T Consensus 164 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 164 --------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred --------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 01112456889999999985 34468899999999999999999999988
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhh
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQ 891 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~ 891 (1003)
.+....+.++.....+....+..++.++.+||.+||..||.+|| ++.++++||||..++|....+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~~~~~~~ 283 (292)
T cd06644 218 LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRP---SAAQLLEHPFVSSVTSNRPLRE 283 (292)
T ss_pred ccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCc---CHHHHhcCccccccccchhHHH
Confidence 77766666665444333334567889999999999999999999 9999999999999999875443
No 114
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.1e-42 Score=397.02 Aligned_cols=258 Identities=28% Similarity=0.425 Sum_probs=223.8
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCC-CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTT-GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~t-gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
...|.+.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+|+.++||||+++++.|...+++||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 34599999999999999999998877 788999976543 23444677889999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 667 VMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999999999988753 356899999999999999999999999999999999999999999999999999741100
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
. ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 223 -~----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~ 273 (478)
T PTZ00267 223 -V----------------------------SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG 273 (478)
T ss_pred -c----------------------------ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 0 00112356899999999999999999999999999999999999999999
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.+..+++..+..+.. +..+..++.++.+||.+||.+||.+|| ++.+++.|+|++.
T Consensus 274 ~~~~~~~~~~~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~Rp---s~~~~l~~~~~~~ 328 (478)
T PTZ00267 274 PSQREIMQQVLYGKY--DPFPCPVSSGMKALLDPLLSKNPALRP---TTQQLLHTEFLKY 328 (478)
T ss_pred CCHHHHHHHHHhCCC--CCCCccCCHHHHHHHHHHhccChhhCc---CHHHHHhCHHHHH
Confidence 888888888876654 234567899999999999999999999 9999999999874
No 115
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.9e-42 Score=356.32 Aligned_cols=265 Identities=62% Similarity=1.116 Sum_probs=227.9
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCCh
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL 676 (1003)
||.|+||.||+|++..+|+.||+|++.+.........+.+.+|+++++.++||||+++++.+.....+|++|||++|++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999999999999999876555556678899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcc
Q 001857 677 YSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTT 756 (1003)
Q Consensus 677 ~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~tt 756 (1003)
.+++.+.+.+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~--------- 151 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL--------- 151 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc---------
Confidence 99999888899999999999999999999999999999999999999999999999999874211100000
Q ss_pred cCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccC
Q 001857 757 LLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRK 836 (1003)
Q Consensus 757 l~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~ 836 (1003)
...........+++.|+|||++.+..++.++|+||||+++|+|++|..||......+.+..+....
T Consensus 152 --------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~ 217 (265)
T cd05579 152 --------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK 217 (265)
T ss_pred --------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 000112234578899999999998889999999999999999999999999888888888887766
Q ss_pred CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCCh
Q 001857 837 IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1003)
Q Consensus 837 ~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idw 885 (1003)
..++.. ..++..+.+||.+||+.+|.+||++.++.++++||||++++|
T Consensus 218 ~~~~~~-~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 218 IEWPED-VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred cCCCcc-ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 554432 225899999999999999999995555599999999999998
No 116
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.5e-43 Score=381.99 Aligned_cols=262 Identities=31% Similarity=0.527 Sum_probs=222.4
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ce
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--EN 663 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~ 663 (1003)
.++++|+.+..|++|+||.||+|+++.|++.||+|.++... .....--..++|+.+|.+++|||||.+.++.... +.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence 35678999999999999999999999999999999987654 2222234567999999999999999998887653 57
Q ss_pred EEEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
+|||||||+. +|..++.+.+ +|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+..-.
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs- 229 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS- 229 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC-
Confidence 9999999987 9999998875 899999999999999999999999999999999999999999999999999994110
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
.....+..+-|.+|.|||.+.|. .|+.++|+||+|||+.||+++++.|.
T Consensus 230 ------------------------------p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~ 279 (419)
T KOG0663|consen 230 ------------------------------PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP 279 (419)
T ss_pred ------------------------------CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC
Confidence 01223457889999999999984 58999999999999999999999999
Q ss_pred CCChhhHHHhhhccC-------------------CCCCCCC---------C-CCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 822 AEHPQQIFDNILNRK-------------------IPWPRVP---------E-EMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~-------------------~~~P~lp---------~-~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
+....+.+.+|.... ..++..| . .+++...+|+..+|.+||.+|. ||+
T Consensus 280 G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~---tA~ 356 (419)
T KOG0663|consen 280 GKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRI---TAE 356 (419)
T ss_pred CCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccc---cHH
Confidence 998888877776511 1122111 1 1568999999999999999999 999
Q ss_pred HHHcCCCCCCC
Q 001857 873 EVKQHVFFKDI 883 (1003)
Q Consensus 873 ELLqHPFFk~I 883 (1003)
+.|+|.||.+.
T Consensus 357 ~~L~h~~F~e~ 367 (419)
T KOG0663|consen 357 DGLKHEYFRET 367 (419)
T ss_pred HhhcccccccC
Confidence 99999999864
No 117
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-43 Score=383.91 Aligned_cols=261 Identities=32% Similarity=0.494 Sum_probs=220.0
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-----cce
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-----REN 663 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d-----~~~ 663 (1003)
..|..++.||.|+||.|+.|.++.+|+.||||.+...- ...-..++..+|+.+|+.++|+||+.+++.+.. -+.
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F-~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF-ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhh-hchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 34666899999999999999999999999999886432 334456889999999999999999999999876 346
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+|+|+|+| +-+|...++..+.+++..++.+++||+.||.|+|+.||+||||||.|+|++.+..+||+|||+|+.....
T Consensus 101 vYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~- 178 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF- 178 (359)
T ss_pred eEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-
Confidence 99999999 5599999999888999999999999999999999999999999999999999999999999999952111
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
......+..+-|.+|.|||++.. ..|+.+.||||+|||+.|||+|++.|.|
T Consensus 179 ----------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG 230 (359)
T KOG0660|consen 179 ----------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPG 230 (359)
T ss_pred ----------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCC
Confidence 00112345789999999999875 6799999999999999999999999998
Q ss_pred CChhhHHHhhhcc-----------------------CC-----CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 823 EHPQQIFDNILNR-----------------------KI-----PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 823 ~~~~ei~qkIl~~-----------------------~~-----~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
.+....++.|+.. .. +|..+..+.++.+.||+.+||..||.+|+ ||+|+
T Consensus 231 ~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRi---ta~eA 307 (359)
T KOG0660|consen 231 KDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRI---TAEEA 307 (359)
T ss_pred CchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccC---CHHHH
Confidence 7765555555431 11 11122247899999999999999999999 99999
Q ss_pred HcCCCCCCC
Q 001857 875 KQHVFFKDI 883 (1003)
Q Consensus 875 LqHPFFk~I 883 (1003)
|+||||...
T Consensus 308 L~hPYl~~~ 316 (359)
T KOG0660|consen 308 LAHPYLAPY 316 (359)
T ss_pred hcChhhhhh
Confidence 999999853
No 118
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.2e-42 Score=375.71 Aligned_cols=257 Identities=26% Similarity=0.417 Sum_probs=207.7
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeee
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSF 658 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk-----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f 658 (1003)
.+..++|++.+.||.|+||.||+|.+. .++..||||+++... .......+.+|+.++..+ +||||+++++++
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 345578999999999999999999852 456789999987532 233456788999999999 899999999988
Q ss_pred ecc-ceEEEEEEeccCCChHHHHHhc------------------------------------------------------
Q 001857 659 TCR-ENLYLVMEYLNGGDLYSLLRNL------------------------------------------------------ 683 (1003)
Q Consensus 659 ~d~-~~lyLVmEy~~GGSL~d~L~~~------------------------------------------------------ 683 (1003)
... ..+|+||||++||+|.+++...
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 764 4689999999999999998652
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCc
Q 001857 684 --------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGT 755 (1003)
Q Consensus 684 --------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~t 755 (1003)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~------------ 228 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP------------ 228 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCc------------
Confidence 237778889999999999999999999999999999999999999999999987311000
Q ss_pred ccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhHHHhhhc
Q 001857 756 TLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILN 834 (1003)
Q Consensus 756 tl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~ 834 (1003)
.........+|+.|||||++.+..++.++|||||||++|||++ |..||.+....+.+...+.
T Consensus 229 -----------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~ 291 (338)
T cd05102 229 -----------------DYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLK 291 (338)
T ss_pred -----------------chhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHh
Confidence 0011123456789999999999999999999999999999997 9999987654443333333
Q ss_pred cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 835 ~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
... .+..+..+++++.+||.+||+.||.+|| ++.++++
T Consensus 292 ~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RP---s~~el~~ 329 (338)
T cd05102 292 DGT-RMRAPENATPEIYRIMLACWQGDPKERP---TFSALVE 329 (338)
T ss_pred cCC-CCCCCCCCCHHHHHHHHHHccCChhhCc---CHHHHHH
Confidence 222 2334667899999999999999999999 8888875
No 119
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.3e-42 Score=379.27 Aligned_cols=257 Identities=26% Similarity=0.431 Sum_probs=212.2
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR----- 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~----- 661 (1003)
.+++|++++.||+|+||.||+|.+..+++.||||++.+... .......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 45789999999999999999999999999999999876432 233446778999999999999999999887653
Q ss_pred -ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 662 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 662 -~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
..+|+||||+.+ +|...+.. .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 358999999965 78777754 48899999999999999999999999999999999999999999999999987310
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 178 ~--------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf 225 (364)
T cd07875 178 T--------------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225 (364)
T ss_pred C--------------------------------CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence 0 00112457899999999999999999999999999999999999999
Q ss_pred CCCChhhHHHhhhccCCC-------------------CC--------------------CCCCCCCHHHHHHHHhhccCC
Q 001857 821 NAEHPQQIFDNILNRKIP-------------------WP--------------------RVPEEMSPEAHDLIDRFLTED 861 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~-------------------~P--------------------~lp~~iS~elkDLIrrcL~kD 861 (1003)
.+.+..+.+..++..... .| ......+..+++||.+||+.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d 305 (364)
T cd07875 226 PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305 (364)
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcC
Confidence 887766665555431100 00 001123567899999999999
Q ss_pred cCCcCCCCCHHHHHcCCCCCC
Q 001857 862 PHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 862 P~kRPg~~TAeELLqHPFFk~ 882 (1003)
|.+|| |+.++|+||||..
T Consensus 306 P~~R~---t~~e~L~hp~~~~ 323 (364)
T cd07875 306 ASKRI---SVDEALQHPYINV 323 (364)
T ss_pred cccCC---CHHHHhcCccccc
Confidence 99999 9999999999973
No 120
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-43 Score=393.62 Aligned_cols=260 Identities=35% Similarity=0.605 Sum_probs=235.2
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.-.=|.+-+.||+|.|+.|-+|++.-||..||||++.|..+..- ...++..|++.|+.++|||||+||++..+...+||
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL 94 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL 94 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence 34459999999999999999999999999999999999876433 34678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeec-CCCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIA-HDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd-~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+|+-.||+|+++|-++ ..+.|+.++.|++||+.|+.|+|+..+|||||||+||.+- .-|-|||+|||++-..
T Consensus 95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf----- 169 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF----- 169 (864)
T ss_pred EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC-----
Confidence 99999999999999765 5799999999999999999999999999999999999775 5699999999997531
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCC-ccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHG-TTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys-~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
..+.+..+.||+..|.|||++.|..|+ +++||||||||||-|.+|++||...
T Consensus 170 ---------------------------~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA 222 (864)
T KOG4717|consen 170 ---------------------------QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA 222 (864)
T ss_pred ---------------------------CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc
Confidence 112445689999999999999999995 6899999999999999999999999
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCCh
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idw 885 (1003)
+..+++-+|+..++. +|..+|.+++|||..||..||.+|- +.++|..|+|++.++-
T Consensus 223 NDSETLTmImDCKYt---vPshvS~eCrdLI~sMLvRdPkkRA---slEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 223 NDSETLTMIMDCKYT---VPSHVSKECRDLIQSMLVRDPKKRA---SLEEIVSTSWLQAGDR 278 (864)
T ss_pred cchhhhhhhhccccc---CchhhhHHHHHHHHHHHhcCchhhc---cHHHHhccccccCCCC
Confidence 999999999999986 4578999999999999999999999 9999999999998753
No 121
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.5e-41 Score=352.29 Aligned_cols=254 Identities=27% Similarity=0.537 Sum_probs=219.5
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-cceEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-RENLYLVM 668 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d-~~~lyLVm 668 (1003)
+|++++.||+|+||.||++.++.+++.||+|.+..... .....+.+.+|+.+++.++||||+++++.+.. ...+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 59999999999999999999999999999999875432 23345678899999999999999999988875 44689999
Q ss_pred EeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 669 EYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~---- 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ---- 155 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc----
Confidence 999999999999763 45899999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
........|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 156 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~ 208 (257)
T cd08223 156 ---------------------------CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN 208 (257)
T ss_pred ---------------------------CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence 01123457899999999999998999999999999999999999999988777
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.....+..... +..+..+++++.+||.+||+.||.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~~~~ 257 (257)
T cd08223 209 SLVYRIIEGKL--PPMPKDYSPELGELIATMLSKRPEKRP---SVKSILRQPYI 257 (257)
T ss_pred HHHHHHHhcCC--CCCccccCHHHHHHHHHHhccCcccCC---CHHHHhcCCCC
Confidence 76666655443 345677899999999999999999999 99999999997
No 122
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.4e-42 Score=359.25 Aligned_cols=255 Identities=37% Similarity=0.649 Sum_probs=215.2
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|++++.||+|+||+||+|++..+++.||+|++......... .....+|+.+++.++||||+++++++.....+|+||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999999999886543332 23445699999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCC
Q 001857 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGP 750 (1003)
Q Consensus 671 ~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p 750 (1003)
+.+++|.+++...+.+++..+..++.||+.||+|||++||+|+||||+|||++.++.++|+|||++....
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~---------- 149 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS---------- 149 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST----------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------
Confidence 9999999999988899999999999999999999999999999999999999999999999999986310
Q ss_pred CccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-cCCCCccceeechhHHHHHHHhCCCCCCCCC---hh
Q 001857 751 AVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-GTGHGTTADWWSVGIILFELIVGIPPFNAEH---PQ 826 (1003)
Q Consensus 751 ~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-g~~ys~kSDIWSLGVILYELLTGk~PF~~~~---~~ 826 (1003)
..........||+.|+|||++. +..++.++||||||+++|+|++|..||.... ..
T Consensus 150 ---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~ 208 (260)
T PF00069_consen 150 ---------------------ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQL 208 (260)
T ss_dssp ---------------------STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHH
T ss_pred ---------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhh
Confidence 0012234568899999999998 7889999999999999999999999998873 33
Q ss_pred hHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
....+.......... .....+.++.++|.+||+.||.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~---~~~~l~~~~~~ 260 (260)
T PF00069_consen 209 EIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRP---SAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGST---THHHHHTSGGG
T ss_pred hhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCc---CHHHHhcCCCC
Confidence 333333332211110 1112348999999999999999999 99999999998
No 123
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.8e-41 Score=350.82 Aligned_cols=254 Identities=30% Similarity=0.536 Sum_probs=222.9
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|.+.+.||+|+||.||+|.+..+++.|++|.+...... ......+.+|+.+++.++||||+++++.+...+.+|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 589999999999999999999999999999998765433 3445678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|++|++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~----- 154 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN----- 154 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc-----
Confidence 99999999999764 56899999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+...
T Consensus 155 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 208 (256)
T cd08529 155 --------------------------TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA 208 (256)
T ss_pred --------------------------cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001123578999999999999989999999999999999999999999888777
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
....+..... +.++..++.++.++|.+||+.+|.+|| ++.++++|||+
T Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 256 (256)
T cd08529 209 LILKIIRGVF--PPVSQMYSQQLAQLIDQCLTKDYRQRP---DTFQLLRNPSL 256 (256)
T ss_pred HHHHHHcCCC--CCCccccCHHHHHHHHHHccCCcccCc---CHHHHhhCCCC
Confidence 7777765443 445567899999999999999999999 99999999985
No 124
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-43 Score=395.93 Aligned_cols=258 Identities=31% Similarity=0.549 Sum_probs=234.8
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce-EEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN-LYL 666 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~-lyL 666 (1003)
+++|..++.+|+|+||.+++++++..++.|++|.+.......+.. +...+|..+++++.|||||.+++.|..++. +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r-~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER-RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh-HHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 578999999999999999999999999999999998877655543 478899999999999999999999999988 999
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||+||+||+|.+.|.+.+ .++++.+..|+.||+.||+|||+++|+|||||+.||+++.++.|||+|||+|+....
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~--- 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP--- 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCC---
Confidence 999999999999997653 699999999999999999999999999999999999999999999999999995110
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
......+.+|||.||.||++.+.+|+.++|||||||++|||++-+++|.+.+
T Consensus 159 ----------------------------~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~ 210 (426)
T KOG0589|consen 159 ----------------------------EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN 210 (426)
T ss_pred ----------------------------chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc
Confidence 0013457899999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
...+..+|..... ..+|..++.+++.+|+.||.++|..|| +|.++|.+|....
T Consensus 211 m~~Li~ki~~~~~--~Plp~~ys~el~~lv~~~l~~~P~~RP---sa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 211 MSELILKINRGLY--SPLPSMYSSELRSLVKSMLRKNPEHRP---SALELLRRPHLLR 263 (426)
T ss_pred hHHHHHHHhhccC--CCCCccccHHHHHHHHHHhhcCCccCC---CHHHHhhChhhhh
Confidence 9999999998773 457789999999999999999999999 9999999998763
No 125
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5.1e-42 Score=377.65 Aligned_cols=257 Identities=26% Similarity=0.440 Sum_probs=210.2
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR----- 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~----- 661 (1003)
.+++|++++.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 45789999999999999999999999999999999876432 233456778899999999999999999988654
Q ss_pred -ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 662 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 662 -~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
..+|+||||+.+ +|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 357999999975 67777654 48899999999999999999999999999999999999999999999999987310
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 171 ~--------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf 218 (355)
T cd07874 171 T--------------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218 (355)
T ss_pred C--------------------------------ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 0 00122457899999999999999999999999999999999999999
Q ss_pred CCCChhhHHHhhhccC----------------------CC-----CC------------CCCCCCCHHHHHHHHhhccCC
Q 001857 821 NAEHPQQIFDNILNRK----------------------IP-----WP------------RVPEEMSPEAHDLIDRFLTED 861 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~----------------------~~-----~P------------~lp~~iS~elkDLIrrcL~kD 861 (1003)
.+.+..+.+..++... .. ++ ..+...+.++++||.+||..|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 298 (355)
T cd07874 219 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298 (355)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCC
Confidence 8776544433322110 00 00 011224578899999999999
Q ss_pred cCCcCCCCCHHHHHcCCCCCC
Q 001857 862 PHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 862 P~kRPg~~TAeELLqHPFFk~ 882 (1003)
|.+|| |+.|+++||||..
T Consensus 299 P~~Rp---s~~ell~hp~~~~ 316 (355)
T cd07874 299 PAKRI---SVDEALQHPYINV 316 (355)
T ss_pred chhcC---CHHHHhcCcchhc
Confidence 99999 9999999999973
No 126
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.5e-42 Score=398.15 Aligned_cols=260 Identities=29% Similarity=0.488 Sum_probs=225.0
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE----- 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~----- 662 (1003)
.++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.++..++|+||++++..+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4689999999999999999999999999999999976543 3345567889999999999999999988775432
Q ss_pred ---eEEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCC
Q 001857 663 ---NLYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 663 ---~lyLVmEy~~GGSL~d~L~~~----g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
.+++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 378999999999999998643 4689999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT 815 (1003)
++...... ........+||+.|+|||++.+..|+.++|||||||++|||++
T Consensus 190 s~~~~~~~-----------------------------~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt 240 (496)
T PTZ00283 190 SKMYAATV-----------------------------SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT 240 (496)
T ss_pred Ceeccccc-----------------------------cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 87411000 0011235689999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
|+.||.+.+..+++..+..... +.++..+++++.+||.+||+.||.+|| ++.++++|||++.
T Consensus 241 G~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~L~~dP~~RP---s~~ell~~p~~~~ 302 (496)
T PTZ00283 241 LKRPFDGENMEEVMHKTLAGRY--DPLPPSISPEMQEIVTALLSSDPKRRP---SSSKLLNMPICKL 302 (496)
T ss_pred CCCCCCCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcccChhhCc---CHHHHHhCHHHHH
Confidence 9999999888888888776544 345678999999999999999999999 9999999999875
No 127
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.4e-41 Score=361.61 Aligned_cols=261 Identities=37% Similarity=0.655 Sum_probs=215.8
Q ss_pred EeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHH---HHHhcCCCcEEEEEeeeeccceEEEEEEecc
Q 001857 596 PISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERD---ILISVRNPFVVRFFYSFTCRENLYLVMEYLN 672 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~---IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~ 672 (1003)
.||+|+||.||+|++..+++.||+|++.+...........+..|.. ++...+||+|+++++.+...+.+|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999999999999999987654332222223334443 3445689999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001857 673 GGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1003)
Q Consensus 673 GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~ 752 (1003)
||+|..++.+.+.+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~----------- 149 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----------- 149 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCc-----------
Confidence 999999998888899999999999999999999999999999999999999999999999999863100
Q ss_pred cCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCC---ChhhH
Q 001857 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAE---HPQQI 828 (1003)
Q Consensus 753 s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~---~~~ei 828 (1003)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||... .....
T Consensus 150 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~ 207 (278)
T cd05606 150 ----------------------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207 (278)
T ss_pred ----------------------cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH
Confidence 01123579999999999975 46899999999999999999999999865 33333
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCC--CHHHHHcCCCCCCCChhHHhhhc
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVKQHVFFKDINWDTLARQK 892 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~--TAeELLqHPFFk~Idwd~L~~~k 892 (1003)
...+.... +.++..++.++.++|.+||..+|.+|+... ++.++++||||+.++|..+...+
T Consensus 208 ~~~~~~~~---~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 270 (278)
T cd05606 208 DRMTLTMA---VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQK 270 (278)
T ss_pred HHHhhccC---CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhcc
Confidence 33332222 334566899999999999999999999765 89999999999999999886654
No 128
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.3e-41 Score=355.76 Aligned_cols=262 Identities=29% Similarity=0.506 Sum_probs=221.9
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc---ccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM---IRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i---~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
+|++.+.||.|+||+||+|.. .++..+|+|.+..... ........+.+|+.+++.++|+||+++++++.+...+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 488899999999999999987 5788999999875321 223445678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
||||++|++|.+++.+.+.+++..+..++.||+.||+|||+.||+|+||||+||+++.++.++|+|||++.........
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~- 158 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH- 158 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc-
Confidence 9999999999999988888999999999999999999999999999999999999999999999999998731100000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
+ ..........||+.|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus 159 ------------~------------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~ 214 (265)
T cd06631 159 ------------G------------THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL 214 (265)
T ss_pred ------------c------------cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH
Confidence 0 0001123457999999999999988999999999999999999999999876655
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.....+.......+.++..++.++.+||++||..+|.+|| ++.++++||||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~l~~~~~ 265 (265)
T cd06631 215 AAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERP---SALQLLRHDFL 265 (265)
T ss_pred HHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCC---CHHHHhcCCCC
Confidence 5544444443445667778999999999999999999999 99999999998
No 129
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.7e-42 Score=377.53 Aligned_cols=256 Identities=28% Similarity=0.459 Sum_probs=211.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------ 661 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~------ 661 (1003)
.++|++++.||.|+||+||+|.+..+++.||+|++.+... .......+.+|+.+|+.++||||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3679999999999999999999999999999999876432 223445677899999999999999999888643
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
..+|++||++ |++|..++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~- 169 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD- 169 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC-
Confidence 3579999988 7799887754 579999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus 170 ---------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf 216 (343)
T cd07878 170 ---------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF 216 (343)
T ss_pred ---------------------------------CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCC
Confidence 01123579999999999987 56899999999999999999999999
Q ss_pred CCCChhhHHHhhhccCC--------------------CCCC--------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 821 NAEHPQQIFDNILNRKI--------------------PWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~--------------------~~P~--------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
.+.+..+.+..+..... .++. .....++.+.+||.+||..||.+|| ++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~---s~~ 293 (343)
T cd07878 217 PGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRI---SAS 293 (343)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCC---CHH
Confidence 87665554444432110 0011 1124567899999999999999999 999
Q ss_pred HHHcCCCCCCC
Q 001857 873 EVKQHVFFKDI 883 (1003)
Q Consensus 873 ELLqHPFFk~I 883 (1003)
++++||||...
T Consensus 294 ell~hp~~~~~ 304 (343)
T cd07878 294 EALAHPYFSQY 304 (343)
T ss_pred HHhcCcchhcc
Confidence 99999999854
No 130
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.3e-42 Score=361.54 Aligned_cols=260 Identities=33% Similarity=0.572 Sum_probs=224.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||.|+||.||+|.+..++..||+|++... .....+.+.+|+.+++.++||||+++++.+.....+|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 6799999999999999999999889999999998653 3445577889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+++++|..++... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~------ 155 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS------ 155 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcc------
Confidence 999999999998764 5699999999999999999999999999999999999999999999999998763100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.........||+.|+|||++. +..++.++|||||||++|+|++|++||..
T Consensus 156 -------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~ 210 (280)
T cd06611 156 -------------------------TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE 210 (280)
T ss_pred -------------------------cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence 001123457899999999985 34567899999999999999999999998
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCCh
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idw 885 (1003)
.+.......+.....+....+..++.++.+||.+||+.+|.+|| ++.++++||||.+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~~~~~~~ 270 (280)
T cd06611 211 LNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRP---TAAELLKHPFVSDQSD 270 (280)
T ss_pred CCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCc---CHHHHhcChhhcccch
Confidence 88777776766554433334567899999999999999999999 9999999999987644
No 131
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.8e-41 Score=354.41 Aligned_cols=261 Identities=28% Similarity=0.524 Sum_probs=221.6
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc------cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI------RKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~------~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
.|.+.+.||.|+||.||+|.+..+++.||+|.+...... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 377888999999999999999889999999988754322 12344678899999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
.|+||||+++++|.+++...+.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||+++....+.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 99999999999999999988889999999999999999999999999999999999999999999999999987421100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
.. ...........|++.|+|||++.+..++.++|+|||||++|+|++|+.||...
T Consensus 161 ~~-------------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 215 (267)
T cd06628 161 LS-------------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC 215 (267)
T ss_pred cc-------------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence 00 00001123456899999999999888999999999999999999999999877
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+.......+... ..+.++..++..+.++|++||+.||.+|| ++.++++||||
T Consensus 216 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~ 267 (267)
T cd06628 216 TQLQAIFKIGEN--ASPEIPSNISSEAIDFLEKTFEIDHNKRP---TAAELLKHPFL 267 (267)
T ss_pred cHHHHHHHHhcc--CCCcCCcccCHHHHHHHHHHccCCchhCc---CHHHHhhCCCC
Confidence 665555554442 23456678899999999999999999999 99999999998
No 132
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2e-41 Score=358.82 Aligned_cols=256 Identities=32% Similarity=0.552 Sum_probs=219.4
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|++++.||.|+||.||+|++..++..+|+|.+.... ......+.+|+.+++.++||||+++++.+......|+||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 788999999999999999999999999999986532 34556788999999999999999999999999999999999
Q ss_pred ccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 671 LNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 671 ~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
+++++|..++.+ .+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~------- 156 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT------- 156 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-------
Confidence 999999988765 467999999999999999999999999999999999999999999999999998631000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........||+.|+|||++. +..++.++|||||||++|+|++|.+||...+
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 212 (282)
T cd06643 157 ------------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN 212 (282)
T ss_pred ------------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC
Confidence 01122457899999999984 3457789999999999999999999998887
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
..+....+.....+....+..++.++.+||.+||..||.+|| ++.++++||||+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~ 268 (282)
T cd06643 213 PMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARW---TTTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCCCEecc
Confidence 766666665544333334567899999999999999999999 99999999999853
No 133
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.3e-41 Score=364.56 Aligned_cols=260 Identities=26% Similarity=0.510 Sum_probs=214.7
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.+++|++++.||.|+||.||+|+++.+++.||+|.+..... ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 45789999999999999999999999999999999875432 2223456789999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.+||+|||++......
T Consensus 82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~--- 157 (301)
T cd07873 82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--- 157 (301)
T ss_pred EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC---
Confidence 999997 5999888754 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........+++.|+|||++.+. .++.++|||||||++|+|++|++||...+
T Consensus 158 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~ 209 (301)
T cd07873 158 ----------------------------TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST 209 (301)
T ss_pred ----------------------------CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0011234678999999998764 57889999999999999999999998877
Q ss_pred hhhHHHhhhccC-------------------CCCCC--------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 825 PQQIFDNILNRK-------------------IPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 825 ~~ei~qkIl~~~-------------------~~~P~--------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
..+....+.... ..++. ....+++.+++||.+||+.||.+|| |++++++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~---t~~eil~h 286 (301)
T cd07873 210 VEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRI---SAEEAMKH 286 (301)
T ss_pred HHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCc---CHHHHhcC
Confidence 655444332210 01111 1135788999999999999999999 99999999
Q ss_pred CCCCCC
Q 001857 878 VFFKDI 883 (1003)
Q Consensus 878 PFFk~I 883 (1003)
|||..+
T Consensus 287 ~~f~~~ 292 (301)
T cd07873 287 PYFHCL 292 (301)
T ss_pred cccccc
Confidence 999865
No 134
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.9e-42 Score=357.38 Aligned_cols=255 Identities=32% Similarity=0.527 Sum_probs=214.8
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++.+.||.|+||.||+|++..+++.||+|+++... ......+.+|+.+++.++||||+++++.+...+.+|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 467999999999999999999999999999999987542 22345678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||+++++|.+++...+.+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~----- 159 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT----- 159 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-----
Confidence 999999999999998889999999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........||+.|+|||++. ...++.++|+|||||++|+|++|.+||....
T Consensus 160 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~ 213 (267)
T cd06645 160 --------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred --------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc
Confidence 01123457999999999985 4558899999999999999999999997655
Q ss_pred hhhHHHhhhccCCCCCCC--CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 825 PQQIFDNILNRKIPWPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~l--p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
+......+.......+.. ...++..+.+||.+||+.+|.+|| +++++++|||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---~~~~ll~~~~ 267 (267)
T cd06645 214 PMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRP---TAEKLLQHPF 267 (267)
T ss_pred chhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCc---CHHHHhcCCC
Confidence 444333333332222222 125788999999999999999999 9999999998
No 135
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.6e-41 Score=350.05 Aligned_cols=260 Identities=33% Similarity=0.557 Sum_probs=220.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||.|+||+||+|....++..+|+|++....... ....+.+|+.+++.++|+||+++++.+...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 47999999999999999999998899999999987644322 5578899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 669 EYLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~---g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|+++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++++++.++|+|||++........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~- 157 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD- 157 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc-
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999874211000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
.........+|++.|+|||++... .++.++|+|||||++|+|++|+.||...+
T Consensus 158 --------------------------~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 211 (267)
T cd06610 158 --------------------------RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP 211 (267)
T ss_pred --------------------------ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC
Confidence 000112345799999999999876 78999999999999999999999998877
Q ss_pred hhhHHHhhhccCCCC-CCC--CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 825 PQQIFDNILNRKIPW-PRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~-P~l--p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
....+.++.....+. +.. ...+++++.+||.+||.+||.+|| ++.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~ll~~p~~ 267 (267)
T cd06610 212 PMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRP---TAEELLKHKFF 267 (267)
T ss_pred hhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCc---CHHHHhhCCCC
Confidence 766666665543221 111 136789999999999999999999 99999999998
No 136
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.2e-41 Score=357.86 Aligned_cols=252 Identities=28% Similarity=0.501 Sum_probs=212.2
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|+++++||.|+||.||+|++..+++.||+|++.+.. .......+.+|+.++..++||||+++++.+...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 46899999999999999999999999999999987542 2334467889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||+++++|..+ ..+++..+..++.||+.||+|||+.||+|+||||+|||++.++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~------- 147 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN------- 147 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc-------
Confidence 99999999654 3578999999999999999999999999999999999999999999999999873100
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh---
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP--- 825 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~--- 825 (1003)
......+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.....
T Consensus 148 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~ 201 (279)
T cd06619 148 --------------------------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG 201 (279)
T ss_pred --------------------------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc
Confidence 012245799999999999999999999999999999999999999965321
Q ss_pred ----hhHHHhhhccCCCCCCC-CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 826 ----QQIFDNILNRKIPWPRV-PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 826 ----~ei~qkIl~~~~~~P~l-p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
....+.+..... +.. ....++++.+||.+||+.+|.+|| +++++++||||...+
T Consensus 202 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~eil~~~~~~~~~ 260 (279)
T cd06619 202 SLMPLQLLQCIVDEDP--PVLPVGQFSEKFVHFITQCMRKQPKERP---APENLMDHPFIVQYN 260 (279)
T ss_pred ccchHHHHHHHhccCC--CCCCCCcCCHHHHHHHHHHhhCChhhCC---CHHHHhcCccccccc
Confidence 122233222221 122 235788999999999999999999 999999999998654
No 137
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.6e-41 Score=364.02 Aligned_cols=256 Identities=30% Similarity=0.520 Sum_probs=215.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||+|+||.||+|++..++..||+|.+.... .......+.+|++++..++||||+++++.|.+.+.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 46999999999999999999999999999999986532 2344567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||++|++|.+++.+.+.+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++.....
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 152 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID------ 152 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc------
Confidence 999999999999988889999999999999999999997 6999999999999999999999999998763100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
......+|++.|+|||++.+..++.++|+|||||++|+|++|..||...+...
T Consensus 153 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~ 205 (308)
T cd06615 153 ---------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE 205 (308)
T ss_pred ---------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 01224678999999999998889999999999999999999999997655433
Q ss_pred HHHhhhccC----------------------------------CCCCCCC-CCCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 828 IFDNILNRK----------------------------------IPWPRVP-EEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 828 i~qkIl~~~----------------------------------~~~P~lp-~~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
....+.... ...|..+ ..++.++.+||.+||..+|.+|| ++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~ 282 (308)
T cd06615 206 LEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERA---DLK 282 (308)
T ss_pred HHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCc---CHH
Confidence 322111100 0001111 13678999999999999999999 999
Q ss_pred HHHcCCCCCC
Q 001857 873 EVKQHVFFKD 882 (1003)
Q Consensus 873 ELLqHPFFk~ 882 (1003)
++++||||.+
T Consensus 283 ~ll~~~~~~~ 292 (308)
T cd06615 283 ELTKHPFIKR 292 (308)
T ss_pred HHhcChhhhh
Confidence 9999999974
No 138
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.5e-41 Score=353.91 Aligned_cols=253 Identities=39% Similarity=0.727 Sum_probs=221.4
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||+|.+..++..||+|++.+.........+.+.+|+.+++.++||||+++++.+.....+|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48999999999999999999999999999999987665555567889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
|+.|++|.+++.....+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~------- 153 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD------- 153 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC-------
Confidence 9999999999988788999999999999999999999999999999999999999999999999998631100
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh---h
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP---Q 826 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~---~ 826 (1003)
.......|+..|+|||++.+..++.++|+||||+++|+|++|..||...+. .
T Consensus 154 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 208 (258)
T cd05578 154 -------------------------TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRD 208 (258)
T ss_pred -------------------------ccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHH
Confidence 011235688899999999988899999999999999999999999987763 3
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCH--HHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA--SEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TA--eELLqHPFF 880 (1003)
.+.+.... ..+..+..++..+.++|.+||..||.+|| ++ .|+++||||
T Consensus 209 ~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~~~l~~~~~~ 258 (258)
T cd05578 209 QIRAKQET---ADVLYPATWSTEAIDAINKLLERDPQKRL---GDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHhcc---ccccCcccCcHHHHHHHHHHccCChhHcC---CccHHHHhcCCCC
Confidence 33333222 22445677899999999999999999999 66 999999998
No 139
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.5e-42 Score=375.93 Aligned_cols=260 Identities=30% Similarity=0.548 Sum_probs=220.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEEEEeeeeccc----
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRE---- 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPN-IVkL~~~f~d~~---- 662 (1003)
+..|+.+++||+|+||+||+|+.+.+|+.||+|.+...... +.......+|+.+|+.++|+| ||+|++++.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 56688899999999999999999999999999998765321 223456689999999999999 999999999887
Q ss_pred --eEEEEEEeccCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCc
Q 001857 663 --NLYLVMEYLNGGDLYSLLRNLG----CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 663 --~lyLVmEy~~GGSL~d~L~~~g----~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
.+|||+||+.- +|..++...+ .++...++.+++||+.||+|||++||+||||||.||||+.+|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 89999999965 9999998765 5888999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLT 815 (1003)
+..... .......++|.+|.|||++.+. .|+..+||||+|||++||++
T Consensus 168 ra~~ip-------------------------------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~ 216 (323)
T KOG0594|consen 168 RAFSIP-------------------------------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFT 216 (323)
T ss_pred HHhcCC-------------------------------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHh
Confidence 831100 0113456899999999999986 79999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccC-----CCCCC-------------CC---------CCCCHHHHHHHHhhccCCcCCcCCC
Q 001857 816 GIPPFNAEHPQQIFDNILNRK-----IPWPR-------------VP---------EEMSPEAHDLIDRFLTEDPHQRLGS 868 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~-----~~~P~-------------lp---------~~iS~elkDLIrrcL~kDP~kRPg~ 868 (1003)
+++.|.+.+..+....|.... ..||. .. ...++...+++.+||+.+|.+|.
T Consensus 217 ~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~-- 294 (323)
T KOG0594|consen 217 RRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRI-- 294 (323)
T ss_pred CCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCc--
Confidence 999999988877777776511 11221 11 12345899999999999999999
Q ss_pred CCHHHHHcCCCCCCC
Q 001857 869 GGASEVKQHVFFKDI 883 (1003)
Q Consensus 869 ~TAeELLqHPFFk~I 883 (1003)
+|+.++.||||..+
T Consensus 295 -Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 295 -SAKGALTHPYFSEL 308 (323)
T ss_pred -CHHHHhcChhhccc
Confidence 99999999999876
No 140
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.7e-41 Score=353.74 Aligned_cols=255 Identities=31% Similarity=0.515 Sum_probs=214.3
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++++.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++..++||||+++++.+...+.+|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 467999999999999999999999999999999987542 22345678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||+++++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~----- 159 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT----- 159 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc-----
Confidence 999999999999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........|++.|+|||++. ...++.++|||||||++|||++|..||....
T Consensus 160 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~ 213 (267)
T cd06646 160 --------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred --------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 00122357899999999985 3447889999999999999999999997655
Q ss_pred hhhHHHhhhccCCCCCCC--CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 825 PQQIFDNILNRKIPWPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~l--p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
+......+.......+.. ...++..+.+||++||+.+|.+|| +++++++|+|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~il~~l~ 267 (267)
T cd06646 214 PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRP---TAERLLTHLF 267 (267)
T ss_pred hhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCc---CHHHHhcCCC
Confidence 544333333332222221 235789999999999999999999 9999999987
No 141
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.3e-41 Score=355.61 Aligned_cols=255 Identities=30% Similarity=0.528 Sum_probs=209.0
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++++.||.|+||.||+|++..++..||+|++..... .......+.+|+.++..++||||+++++.+.+...+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58999999999999999999999999999999875432 22234567889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 670 YLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 670 y~~GGSL~d~L~~~---g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 154 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP---- 154 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC----
Confidence 997 5898888653 46899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
........|++.|+|||++.+. .++.++|||||||++|+|++|++||.+...
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~ 207 (285)
T cd07861 155 ---------------------------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSE 207 (285)
T ss_pred ---------------------------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 0011234678999999998764 478999999999999999999999987654
Q ss_pred hhHHHhhhccCC------------------CC--------CCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 826 QQIFDNILNRKI------------------PW--------PRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 826 ~ei~qkIl~~~~------------------~~--------P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
......+..... .+ ......+++++.+||++||+.||.+|| ++.++++|||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp---t~~~ll~~~~ 284 (285)
T cd07861 208 IDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRI---SAKKALNHPY 284 (285)
T ss_pred HHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCC---CHHHHhcCCC
Confidence 333222211000 00 011235789999999999999999999 9999999999
Q ss_pred C
Q 001857 880 F 880 (1003)
Q Consensus 880 F 880 (1003)
|
T Consensus 285 ~ 285 (285)
T cd07861 285 F 285 (285)
T ss_pred C
Confidence 8
No 142
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-43 Score=398.41 Aligned_cols=262 Identities=32% Similarity=0.573 Sum_probs=236.6
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+-|+|+..||-|+||+||+|.++.++...|-|+|... ..+.++.++-|++||..++||+||+|++.|...+.++|+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 3489999999999999999999999999999988643 4677889999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||.||-+..++-.. ..|++.+++.+.+|++.||.|||+++|||||||..|||++.+|.|+|+|||.+-.
T Consensus 109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAK--------- 179 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAK--------- 179 (1187)
T ss_pred eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeeccccccc---------
Confidence 999999999888765 4699999999999999999999999999999999999999999999999998752
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
......+..+++|||+|||||++. ..+|++++||||||++|.||..+.||-..
T Consensus 180 ----------------------n~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe 237 (1187)
T KOG0579|consen 180 ----------------------NKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE 237 (1187)
T ss_pred ----------------------chhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc
Confidence 012234567899999999999875 57899999999999999999999999999
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhH
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDT 887 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~ 887 (1003)
-++..++-+|.+...+-.-.|..++..+.||+.+||.+||..|| ++.+|++||||.+++-..
T Consensus 238 lnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp---~aaqll~Hpfv~~~~SnK 299 (1187)
T KOG0579|consen 238 LNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRP---PAAQLLKHPFVQNAPSNK 299 (1187)
T ss_pred cchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCC---CHHHHhhCcccccCCcch
Confidence 99999999998877665556889999999999999999999999 999999999999877654
No 143
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-41 Score=380.14 Aligned_cols=260 Identities=22% Similarity=0.343 Sum_probs=212.8
Q ss_pred CCeEEEEEeeccCceEEEEEEEC--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKR--TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk--~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.+|++++.||+|+||.||+|... .+++.||+|.+... ....+|+.+|+.++||||+++++.|.....+|+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 46999999999999999999864 35678999987653 234579999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||++. ++|.+++...+.+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||+++......
T Consensus 164 v~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~--- 239 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP--- 239 (392)
T ss_pred EehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccc---
Confidence 999995 6999999777889999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
........+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+....
T Consensus 240 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~ 293 (392)
T PHA03207 240 --------------------------DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVK 293 (392)
T ss_pred --------------------------ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCC
Confidence 001123468999999999999999999999999999999999999999765421
Q ss_pred ---hHHHhhhcc----CC-------------------------CCCCC--CCCCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 827 ---QIFDNILNR----KI-------------------------PWPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 827 ---ei~qkIl~~----~~-------------------------~~P~l--p~~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
..+..+... .. ..+.. ...++.++.+||.+||..||.+|| ++.
T Consensus 294 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rp---sa~ 370 (392)
T PHA03207 294 SSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRP---SAQ 370 (392)
T ss_pred CcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCC---CHH
Confidence 112222110 00 00000 123567899999999999999999 999
Q ss_pred HHHcCCCCCCCChhHHh
Q 001857 873 EVKQHVFFKDINWDTLA 889 (1003)
Q Consensus 873 ELLqHPFFk~Idwd~L~ 889 (1003)
++|+||||+...|+.+.
T Consensus 371 e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 371 DILSLPLFTKEPINLLN 387 (392)
T ss_pred HHhhCchhhccchhhhc
Confidence 99999999988887664
No 144
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.5e-41 Score=347.40 Aligned_cols=254 Identities=37% Similarity=0.596 Sum_probs=218.6
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||.|+||.||+|.+..+++.+|+|++.... ....+.+.+|+.+++.++||||+++++.+.....+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 67999999999999999999999999999999997643 224578889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++.....
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~------ 153 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA------ 153 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhh------
Confidence 999999999999776 7899999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC---CCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT---GHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~---~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
.........|+..|+|||++.+. .++.++|+|||||++|+|++|++||...+
T Consensus 154 -------------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 154 -------------------------TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred -------------------------hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 00112345789999999999876 78999999999999999999999998877
Q ss_pred hhhHHHhhhccCCCCC--CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 825 PQQIFDNILNRKIPWP--RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P--~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
.......+.......+ ..+..++.++.+||.+||..+|..|| ++.+++.|+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~~~~ 262 (262)
T cd06613 209 PMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRP---TATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCC---CHHHHhcCCC
Confidence 6655555444422222 22345678999999999999999999 9999999998
No 145
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4e-41 Score=351.31 Aligned_cols=262 Identities=28% Similarity=0.517 Sum_probs=218.4
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc---cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI---RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~---~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
+|+..+.||+|+||.||+|.+..+++.||+|++...... .....+.+.+|+.+++.++||||+++++.+.+.+.+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999999999999999998754322 22345788999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC-cEEEeecCCccccccCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~~~~d 745 (1003)
||||++|++|.+++.+.+.+++..+..++.||+.||.|||++||+|+||||+||+++.++ .+||+|||++........
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~- 159 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT- 159 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc-
Confidence 999999999999998888899999999999999999999999999999999999998876 599999999874110000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
..........||..|+|||++.+..++.++|+|||||++|+|++|..||.....
T Consensus 160 --------------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 213 (268)
T cd06630 160 --------------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH 213 (268)
T ss_pred --------------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 000112235789999999999988899999999999999999999999975543
Q ss_pred hhHHHhhhc--cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 826 QQIFDNILN--RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 826 ~ei~qkIl~--~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
......+.. .....+.++..+++++.++|.+||..+|.+|| ++.++++||||+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~ll~~~~~~ 268 (268)
T cd06630 214 SNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRP---PSRELLKHPVFR 268 (268)
T ss_pred cchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCc---CHHHHhcCcccC
Confidence 322222221 11123456677899999999999999999999 999999999995
No 146
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=7.4e-41 Score=351.52 Aligned_cols=260 Identities=30% Similarity=0.501 Sum_probs=217.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--cceE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM--IRKNAVESILAERDILISVRNPFVVRFFYSFTC--RENL 664 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i--~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d--~~~l 664 (1003)
.+|++.+.||+|+||.||+|.+..++..||+|++..... ........+.+|+.+++.++||||+++++.+.. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 368999999999999999999999999999999875432 223455678899999999999999999998876 3578
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|++|||+++++|.+++.+.+.+++.....++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999873110000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
.........|+..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 162 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~ 213 (266)
T cd06651 162 ----------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE 213 (266)
T ss_pred ----------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc
Confidence 0001123568999999999999889999999999999999999999998776
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
.......+.... ..+.++..+++.+++|| +||..+|.+|| +++++++||||+
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li-~~~~~~p~~Rp---~~~eil~hp~~~ 265 (266)
T cd06651 214 AMAAIFKIATQP-TNPQLPSHISEHARDFL-GCIFVEARHRP---SAEELLRHPFAQ 265 (266)
T ss_pred hHHHHHHHhcCC-CCCCCchhcCHHHHHHH-HHhcCChhhCc---CHHHHhcCcccc
Confidence 555444443322 23556677899999999 57778999999 999999999996
No 147
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.2e-40 Score=349.18 Aligned_cols=260 Identities=29% Similarity=0.510 Sum_probs=218.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc--cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD--MIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~--i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~l 664 (1003)
.+|++.+.||+|+||.||+|++..+++.||||++.... .......+.+.+|+.+++.++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57999999999999999999999999999999886432 12234567888999999999999999999998764 468
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|++|||++|++|.+++.+.+.+++..+..++.||+.||+|||++||+|+||||+|||++.++.++|+|||+++.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~-- 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI-- 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc--
Confidence 999999999999999988888999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
.. .........||..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 160 ------~~--------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 213 (265)
T cd06652 160 ------CL--------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE 213 (265)
T ss_pred ------cc--------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc
Confidence 00 0001223568999999999998889999999999999999999999998766
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
.......+.... ..+..+..++..+.++|++||. +|.+|| +++++++|||+.
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp---~~~~il~~~~~~ 265 (265)
T cd06652 214 AMAAIFKIATQP-TNPVLPPHVSDHCRDFLKRIFV-EAKLRP---SADELLRHTFVH 265 (265)
T ss_pred hHHHHHHHhcCC-CCCCCchhhCHHHHHHHHHHhc-ChhhCC---CHHHHhcCcccC
Confidence 555554444332 2345667788999999999995 899999 999999999984
No 148
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.1e-41 Score=358.97 Aligned_cols=260 Identities=34% Similarity=0.568 Sum_probs=220.7
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
+....+|++++.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|....+.
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 3344689999999999999999999999999999999876432 2346688999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||++|++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 93 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~-- 169 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-- 169 (296)
T ss_pred EEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccc--
Confidence 999999999999999865 46899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+
T Consensus 170 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 170 -----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred -----------------------------ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 001123578999999999998889999999999999999999999998877
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.......+.....+....+..++..+.+||.+||.++|.+|| ++.++++||||..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~eil~~~~~~~ 275 (296)
T cd06654 221 PLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG---SAKELLQHQFLKI 275 (296)
T ss_pred HHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCc---CHHHHhhChhhhc
Confidence 654443333332222234567889999999999999999999 9999999999974
No 149
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-41 Score=359.82 Aligned_cols=242 Identities=18% Similarity=0.221 Sum_probs=211.6
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec----cceEEEEEEe
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC----RENLYLVMEY 670 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d----~~~lyLVmEy 670 (1003)
..||+|++|.||+|.. +|+.||||++++.........+.+.+|+.+|.+++||||+++++++.+ ...+|+||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5789999999999987 689999999987655455556788899999999999999999999877 4578999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 671 ~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
++||+|.+++...+.+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~--------- 174 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS--------- 174 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhc---------
Confidence 9999999999988889999999999999999999998 599999999999999999999999999987310
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+
T Consensus 175 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~ 229 (283)
T PHA02988 175 -------------------------SPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE 229 (283)
T ss_pred -------------------------cccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH
Confidence 00113468999999999976 678999999999999999999999999988888
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
++..+...... +.++..+++++++||.+||+.||.+|| ++.++++
T Consensus 230 ~~~~i~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~ell~ 274 (283)
T PHA02988 230 IYDLIINKNNS-LKLPLDCPLEIKCIVEACTSHDSIKRP---NIKEILY 274 (283)
T ss_pred HHHHHHhcCCC-CCCCCcCcHHHHHHHHHHhcCCcccCc---CHHHHHH
Confidence 88887665544 335557899999999999999999999 8888875
No 150
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5.5e-41 Score=353.32 Aligned_cols=257 Identities=34% Similarity=0.606 Sum_probs=222.8
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||.|+||.||+|++..++..||+|++.... .......+.+|+.+++.++||||+++++.+.+...+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 46899999999999999999999999999999987543 2334467789999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||+++++|.+++... .+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||+++.....
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~------ 151 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTST------ 151 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccc------
Confidence 999999999999865 8999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
........|++.|+|||++.+..++.++|||||||++|+|++|.+||...+....
T Consensus 152 -------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~ 206 (274)
T cd06609 152 -------------------------MSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV 206 (274)
T ss_pred -------------------------ccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH
Confidence 0112345789999999999998899999999999999999999999988777666
Q ss_pred HHhhhccCCCCCCCCCC-CCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 829 FDNILNRKIPWPRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~-iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
...+..... +.++.. ++.++.++|.+||..+|.+|| ++.++++||||.+..
T Consensus 207 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~p~~Rp---t~~~il~~~~~~~~~ 258 (274)
T cd06609 207 LFLIPKNNP--PSLEGNKFSKPFKDFVSLCLNKDPKERP---SAKELLKHKFIKKAK 258 (274)
T ss_pred HHHhhhcCC--CCCcccccCHHHHHHHHHHhhCChhhCc---CHHHHhhChhhcCCC
Confidence 666554432 333444 899999999999999999999 999999999998653
No 151
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=7.8e-41 Score=352.29 Aligned_cols=257 Identities=29% Similarity=0.484 Sum_probs=213.1
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||+|+||.||+|+++.+++.||+|++..... .....+.+.+|+.+++.++||||+++++.+.....+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 469999999999999999999999999999999875432 1223356788999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++++.|..++.....+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------ 153 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGP------ 153 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCC------
Confidence 99999998888877778999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........|+..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 154 -------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~ 208 (286)
T cd07847 154 -------------------------GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD 208 (286)
T ss_pred -------------------------cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 001123467889999999876 457899999999999999999999998766544
Q ss_pred HHHhhhccC-------------------CCCCC---------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 828 IFDNILNRK-------------------IPWPR---------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 828 i~qkIl~~~-------------------~~~P~---------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
....+.... ...+. ....++..+.+||.+||+.+|.+|| ++.+++.|||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~eil~~~~ 285 (286)
T cd07847 209 QLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERL---SCEELLEHPY 285 (286)
T ss_pred HHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccC---CHHHHhcCCC
Confidence 433322110 00010 0134688999999999999999999 9999999999
Q ss_pred C
Q 001857 880 F 880 (1003)
Q Consensus 880 F 880 (1003)
|
T Consensus 286 f 286 (286)
T cd07847 286 F 286 (286)
T ss_pred C
Confidence 8
No 152
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.5e-40 Score=345.44 Aligned_cols=254 Identities=29% Similarity=0.544 Sum_probs=222.7
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++++.||.|+||.||++++..+|+.||+|.+...... ......+.+|+.+++.++||||+++++.+...++.|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 589999999999999999999999999999998765432 3344678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|+.+++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~------ 153 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS------ 153 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc------
Confidence 99999999999764 3589999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
.........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus 154 -------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08218 154 -------------------------TVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN 208 (256)
T ss_pred -------------------------chhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence 0011123568999999999998889999999999999999999999999888888
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
....+..+.. +..+..++.++.++|.+||+.+|.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~vl~~~~~ 256 (256)
T cd08218 209 LVLKIIRGSY--PPVSSHYSYDLRNLVSQLFKRNPRDRP---SVNSILEKNFI 256 (256)
T ss_pred HHHHHhcCCC--CCCcccCCHHHHHHHHHHhhCChhhCc---CHHHHhhCcCC
Confidence 7777766543 445677899999999999999999999 99999999998
No 153
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.4e-41 Score=364.56 Aligned_cols=250 Identities=26% Similarity=0.464 Sum_probs=193.5
Q ss_pred EEEeeccCceEEEEEEEC--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--cceEEEEEE
Q 001857 594 IKPISRGAFGRVFLAKKR--TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RENLYLVME 669 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk--~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d--~~~lyLVmE 669 (1003)
.++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.+|+.++||||++++++|.. ...+|++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 367999999999999976 4678999999875432 2346789999999999999999999854 457899999
Q ss_pred eccCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceee----cCCCcEEEeecCCc
Q 001857 670 YLNGGDLYSLLRNL---------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI----AHDGHIKLTDFGLS 736 (1003)
Q Consensus 670 y~~GGSL~d~L~~~---------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL----d~dG~VKLiDFGLA 736 (1003)
|+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 995 4898887532 258999999999999999999999999999999999999 45679999999999
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLT 815 (1003)
+...... .........+||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 160 ~~~~~~~----------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~ 211 (317)
T cd07868 160 RLFNSPL----------------------------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211 (317)
T ss_pred eccCCCC----------------------------ccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHh
Confidence 7411000 000112346899999999999874 58999999999999999999
Q ss_pred CCCCCCCCChh---------hHHHhhhccCC-----------CCCC------------------------CCCCCCHHHH
Q 001857 816 GIPPFNAEHPQ---------QIFDNILNRKI-----------PWPR------------------------VPEEMSPEAH 851 (1003)
Q Consensus 816 Gk~PF~~~~~~---------ei~qkIl~~~~-----------~~P~------------------------lp~~iS~elk 851 (1003)
|++||...... ..+..+..... ..+. .....+.++.
T Consensus 212 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (317)
T cd07868 212 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF 291 (317)
T ss_pred CCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHH
Confidence 99999653321 11112211000 0000 0012356789
Q ss_pred HHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 852 DLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 852 DLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+||++||++||.+|| |++|+++||||
T Consensus 292 dli~~mL~~dP~~R~---t~~e~l~hp~f 317 (317)
T cd07868 292 HLLQKLLTMDPIKRI---TSEQAMQDPYF 317 (317)
T ss_pred HHHHHHhccCcccCC---CHHHHhcCCCC
Confidence 999999999999999 99999999998
No 154
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.7e-41 Score=356.09 Aligned_cols=264 Identities=24% Similarity=0.387 Sum_probs=219.4
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~-----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d 660 (1003)
...++|++.+.||+|+||.||+|..+. .+..||+|++.... .......+.+|..+++.++||||+++++++.+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 345789999999999999999997652 35589999876543 22233567889999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEE
Q 001857 661 RENLYLVMEYLNGGDLYSLLRNLG----------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKL 730 (1003)
Q Consensus 661 ~~~lyLVmEy~~GGSL~d~L~~~g----------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKL 730 (1003)
....|+||||+++|+|.+++...+ .++...+..++.||+.||.|||++||+||||||+|||++.++.++|
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999999997532 2456788899999999999999999999999999999999999999
Q ss_pred eecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHH
Q 001857 731 TDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIIL 810 (1003)
Q Consensus 731 iDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVIL 810 (1003)
+|||+++....... ........++..|+|||.+.+..++.++|+|||||++
T Consensus 161 ~Dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l 211 (288)
T cd05061 161 GDFGMTRDIYETDY-----------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 211 (288)
T ss_pred CcCCcccccccccc-----------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH
Confidence 99999873110000 0011223567789999999988899999999999999
Q ss_pred HHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc------CCCCCCC
Q 001857 811 FELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ------HVFFKDI 883 (1003)
Q Consensus 811 YELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq------HPFFk~I 883 (1003)
|||++ |.+||.+....+.+..+..... +..+..+++.+.++|.+||+.||.+|| ++.++++ ||||.++
T Consensus 212 ~el~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 212 WEITSLAEQPYQGLSNEQVLKFVMDGGY--LDQPDNCPERVTDLMRMCWQFNPKMRP---TFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhHCc---CHHHHHHHHHhhcCCCCCCC
Confidence 99998 8999998888887777765432 344567889999999999999999999 8888876 9999999
Q ss_pred Ch
Q 001857 884 NW 885 (1003)
Q Consensus 884 dw 885 (1003)
+|
T Consensus 287 ~~ 288 (288)
T cd05061 287 SF 288 (288)
T ss_pred CC
Confidence 98
No 155
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.3e-41 Score=347.41 Aligned_cols=253 Identities=33% Similarity=0.610 Sum_probs=218.1
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||.|+||.||+|.+..++..||+|.+.... ..+.+.+|+.+++.++||||+++++.+.+...+|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 67999999999999999999999889999999987542 1578889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+++++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~----- 152 (256)
T cd06612 78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT----- 152 (256)
T ss_pred ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC-----
Confidence 99999999999975 357899999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........|+..|+|||++.+..++.++|||||||++|+|++|++||.......
T Consensus 153 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~ 206 (256)
T cd06612 153 --------------------------MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR 206 (256)
T ss_pred --------------------------ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 001223558899999999999999999999999999999999999998776655
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
....+..........+..++..+.+||.+||+.||.+|| ++.++++||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---s~~~il~~~~~ 256 (256)
T cd06612 207 AIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERP---SAIQLLQHPFI 256 (256)
T ss_pred hhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCc---CHHHHhcCCCC
Confidence 444443333222233456788999999999999999999 99999999998
No 156
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-42 Score=377.11 Aligned_cols=251 Identities=33% Similarity=0.561 Sum_probs=212.1
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----eE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-----NL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~-----~l 664 (1003)
.|+-.+++|.|+||.||.|....+++.||||.+-.... .-.+|+.+|+.++|||||+|..+|.... ++
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 48999999999999999999999999999998754321 2236999999999999999998886532 46
Q ss_pred EEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC-CcEEEeecCCcccc
Q 001857 665 YLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKVG 739 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~~ 739 (1003)
.+|||||+. +|..+++. +..++.-.++.|+.||++||.|||+.||+||||||.|||+|.+ |.+||||||.|+..
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 699999976 99999974 4679999999999999999999999999999999999999986 99999999999952
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCC
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~ 818 (1003)
.. +....++..|..|+|||.+.| ..|+.+.||||.||++.||+-|++
T Consensus 177 ~~--------------------------------~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p 224 (364)
T KOG0658|consen 177 VK--------------------------------GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP 224 (364)
T ss_pred cc--------------------------------CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence 21 112246788999999999998 569999999999999999999999
Q ss_pred CCCCCChhhHHHhhhcc-----------------CCCCCC---------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 819 PFNAEHPQQIFDNILNR-----------------KIPWPR---------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 819 PF~~~~~~ei~qkIl~~-----------------~~~~P~---------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
.|.+.+..+.+..|.+- ...+|. +....++++.+|+.++|+++|.+|. ++.
T Consensus 225 lFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~---~~~ 301 (364)
T KOG0658|consen 225 LFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRL---SAL 301 (364)
T ss_pred ccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcC---CHH
Confidence 99998877766666541 111222 2245789999999999999999999 999
Q ss_pred HHHcCCCCCCC
Q 001857 873 EVKQHVFFKDI 883 (1003)
Q Consensus 873 ELLqHPFFk~I 883 (1003)
|++.||||..+
T Consensus 302 ~~l~h~fFdel 312 (364)
T KOG0658|consen 302 EALAHPFFDEL 312 (364)
T ss_pred HHhcchhhHHh
Confidence 99999999864
No 157
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.4e-41 Score=356.18 Aligned_cols=257 Identities=28% Similarity=0.527 Sum_probs=216.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||.|+||.||+|++..++..||+|.++... .......+.+|+.+++.++||||+++++.+...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 46999999999999999999999999999999886531 2334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 669 EYLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~---g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||++|++|..++... ..+++..+..++.||+.||.|||+ .||+||||||+||+++.++.+||+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--- 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA--- 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC---
Confidence 999999999988763 379999999999999999999996 6999999999999999999999999999863100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC------CCCccceeechhHHHHHHHhCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT------GHGTTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~------~ys~kSDIWSLGVILYELLTGk~ 818 (1003)
.......|++.|+|||++.+. .++.++|||||||++|+|++|..
T Consensus 156 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~ 205 (286)
T cd06622 156 ------------------------------SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRY 205 (286)
T ss_pred ------------------------------CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCC
Confidence 011234688899999998653 35789999999999999999999
Q ss_pred CCCCCChhhHHHhhhc-cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 819 PFNAEHPQQIFDNILN-RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 819 PF~~~~~~ei~qkIl~-~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
||........+..+.. .....+.++..++.++.+||.+||+.+|.+|| ++.++++||||...
T Consensus 206 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~~~~~~~~ 268 (286)
T cd06622 206 PYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRP---TYAQLLEHPWLVKY 268 (286)
T ss_pred CCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCC---CHHHHhcChhhhhc
Confidence 9976655444433221 11223456667999999999999999999999 99999999999743
No 158
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.1e-41 Score=390.48 Aligned_cols=252 Identities=31% Similarity=0.525 Sum_probs=216.0
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-C-----CcEEEEEeeeeccce
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-N-----PFVVRFFYSFTCREN 663 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-H-----PNIVkL~~~f~d~~~ 663 (1003)
+|++++.||+|+||.|.+|.+..|++.||||+++.. .....+...|+.+|..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 699999999999999999999999999999999864 456677788999999997 4 389999999999999
Q ss_pred EEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC--CcEEEeecCCcccc
Q 001857 664 LYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD--GHIKLTDFGLSKVG 739 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d--G~VKLiDFGLAk~~ 739 (1003)
+|||+|++. .+|+++|+.+ ..++...++.++.||+.||.+||+.||||+|||||||||.+- ..|||+|||.|...
T Consensus 263 lciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 999999995 5999999876 469999999999999999999999999999999999999764 47999999998741
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~P 819 (1003)
.....+++-+..|+|||+|.|.+|+.+.||||||||+.||++|.+.
T Consensus 342 ----------------------------------~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PL 387 (586)
T KOG0667|consen 342 ----------------------------------SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPL 387 (586)
T ss_pred ----------------------------------CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccc
Confidence 1122367888999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHhhhccCCC---------------------CCC----------------------------CC-------
Q 001857 820 FNAEHPQQIFDNILNRKIP---------------------WPR----------------------------VP------- 843 (1003)
Q Consensus 820 F~~~~~~ei~qkIl~~~~~---------------------~P~----------------------------lp------- 843 (1003)
|.+.+..+.+..|+.-... ++. .|
T Consensus 388 fpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~ 467 (586)
T KOG0667|consen 388 FPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLE 467 (586)
T ss_pred cCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccc
Confidence 9999888877777651100 000 01
Q ss_pred ----CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 844 ----EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 844 ----~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
..-...+.|||.+||.+||.+|+ |+.++|+||||...
T Consensus 468 ~~~~~~~~~~F~dflk~~L~~dP~~R~---tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 468 SGLPKADDKLFIDFLKRCLEWDPAERI---TPAQALNHPFLTGT 508 (586)
T ss_pred hhcccccHHHHHHHHHHHhccCchhcC---CHHHHhcCcccccc
Confidence 01235689999999999999999 99999999999853
No 159
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.6e-41 Score=366.11 Aligned_cols=264 Identities=25% Similarity=0.400 Sum_probs=209.9
Q ss_pred EEEEeecc--CceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 593 IIKPISRG--AFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 593 Ilk~LG~G--~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
++++||+| +|++||++.++.+|+.||+|++..... .....+.+.+|+.+++.++||||++++++|..++.+|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 789999999999999999999876432 234456778899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 671 LNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 671 ~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
+++|+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||.+...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~-~---- 155 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINH-G---- 155 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccc-c----
Confidence 9999999999653 45899999999999999999999999999999999999999999999999875421000 0
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
.. .. ..........++..|+|||++.+ ..|+.++|||||||++|||++|+.||......
T Consensus 156 -~~---~~---------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 216 (327)
T cd08227 156 -QR---LR---------------VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT 216 (327)
T ss_pred -cc---cc---------------ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh
Confidence 00 00 00001123467888999999976 46899999999999999999999999865544
Q ss_pred hHHHhhhccCCCC-------------------------------------------CCCCCCCCHHHHHHHHhhccCCcC
Q 001857 827 QIFDNILNRKIPW-------------------------------------------PRVPEEMSPEAHDLIDRFLTEDPH 863 (1003)
Q Consensus 827 ei~qkIl~~~~~~-------------------------------------------P~lp~~iS~elkDLIrrcL~kDP~ 863 (1003)
...........+. ......+++.+.+||.+||+.||.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 296 (327)
T cd08227 217 QMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPD 296 (327)
T ss_pred HHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCch
Confidence 4333322211100 001123578899999999999999
Q ss_pred CcCCCCCHHHHHcCCCCCCCC
Q 001857 864 QRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 864 kRPg~~TAeELLqHPFFk~Id 884 (1003)
+|| |+.++++||||+.+.
T Consensus 297 ~Rp---t~~ell~~p~f~~~~ 314 (327)
T cd08227 297 ARP---SASTLLNHSFFKQIK 314 (327)
T ss_pred hcC---CHHHHhcChhhhhcc
Confidence 999 999999999998754
No 160
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3e-40 Score=351.30 Aligned_cols=259 Identities=33% Similarity=0.540 Sum_probs=214.4
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc--
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR-- 661 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~-- 661 (1003)
+...++|++.+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+.++..+ +||||+++++++...
T Consensus 18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 344678999999999999999999999999999999986542 1235567889999988 899999999988754
Q ss_pred ---ceEEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecC
Q 001857 662 ---ENLYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1003)
Q Consensus 662 ---~~lyLVmEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1003)
..+|+||||++|++|.+++.. ...+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg 173 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFG 173 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecc
Confidence 368999999999999998863 3568999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-----CCCccceeechhHH
Q 001857 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-----GHGTTADWWSVGII 809 (1003)
Q Consensus 735 LAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-----~ys~kSDIWSLGVI 809 (1003)
++...... ........|++.|+|||++... .++.++|||||||+
T Consensus 174 ~~~~~~~~-------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi 222 (291)
T cd06639 174 VSAQLTST-------------------------------RLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT 222 (291)
T ss_pred cchhcccc-------------------------------cccccCccCCccccChhhhcCCCCcccccCCccchHHHHHH
Confidence 98731000 0011235689999999998643 26789999999999
Q ss_pred HHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 810 LFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 810 LYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
+|+|++|++||...........+..........+..++..+.+||.+||+++|.+|| ++.++++||||+
T Consensus 223 ~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~~~~~~ 291 (291)
T cd06639 223 AIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARP---SVTHLLEHPFIK 291 (291)
T ss_pred HHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCc---CHHHHhcCcccC
Confidence 999999999998877655555554433222223456788999999999999999999 999999999994
No 161
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.1e-41 Score=350.81 Aligned_cols=253 Identities=28% Similarity=0.503 Sum_probs=210.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc------
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR------ 661 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~------ 661 (1003)
+.|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.++..+ +||||+++++.|...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 56899999999999999999999999999999987542 2235677899999988 799999999998753
Q ss_pred ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccc
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1003)
..+|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 4689999999999999999864 46899999999999999999999999999999999999999999999999998731
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHH
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELI 814 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYELL 814 (1003)
... ........|++.|+|||++. +..++.++|||||||++|||+
T Consensus 162 ~~~-------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~ 210 (272)
T cd06637 162 DRT-------------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 210 (272)
T ss_pred ccc-------------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHH
Confidence 000 01123467999999999986 345788999999999999999
Q ss_pred hCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 815 VGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 815 TGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+|..||...........+...... ...+..++.++.+||.+||..+|.+|| ++.++++||||
T Consensus 211 ~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~~~~~ 272 (272)
T cd06637 211 EGAPPLCDMHPMRALFLIPRNPAP-RLKSKKWSKKFQSFIESCLVKNHSQRP---TTEQLMKHPFI 272 (272)
T ss_pred hCCCCccccCHHHHHHHHhcCCCC-CCCCCCcCHHHHHHHHHHcCCChhhCC---CHHHHhhCCCC
Confidence 999999876655444443332221 122346789999999999999999999 99999999998
No 162
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3e-40 Score=343.15 Aligned_cols=254 Identities=28% Similarity=0.506 Sum_probs=223.4
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++++.||.|+||.||++++..+++.+++|.+...... ......+.+|+.+++.++|+||+++++++.+.+.++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 489999999999999999999999999999998765433 3445678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|++|++|.+++... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.+||+|||+++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 99999999999765 468999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+
T Consensus 156 ---------------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08221 156 ---------------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN 208 (256)
T ss_pred ---------------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 01224578999999999998889999999999999999999999999888888
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
....+..+.. +..+..++.++.++|.+||.++|.+|| ++.++++|+|+
T Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~R~---s~~~ll~~~~l 256 (256)
T cd08221 209 LVVKIVQGNY--TPVVSVYSSELISLVHSLLQQDPEKRP---TADEVLDQPLL 256 (256)
T ss_pred HHHHHHcCCC--CCCccccCHHHHHHHHHHcccCcccCC---CHHHHhhCcCC
Confidence 8878776543 334467899999999999999999999 99999999986
No 163
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.3e-41 Score=354.40 Aligned_cols=256 Identities=25% Similarity=0.413 Sum_probs=218.2
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCC-----CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTG-----DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tg-----k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d 660 (1003)
..+++|++++.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34578999999999999999999986554 689999986542 23445678899999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC
Q 001857 661 RENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH 724 (1003)
Q Consensus 661 ~~~lyLVmEy~~GGSL~d~L~~~----------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~ 724 (1003)
....|++|||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 99999999999999999999764 45788899999999999999999999999999999999999
Q ss_pred CCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceee
Q 001857 725 DGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWW 804 (1003)
Q Consensus 725 dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIW 804 (1003)
++.+||+|||+++..... + .........+|+.|+|||++.+..++.++|||
T Consensus 160 ~~~~~L~dfg~~~~~~~~--~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~ 210 (283)
T cd05048 160 GLTVKISDFGLSRDIYSA--D---------------------------YYRVQSKSLLPVRWMPPEAILYGKFTTESDIW 210 (283)
T ss_pred CCcEEECCCcceeecccc--c---------------------------cccccCCCcccccccCHHHhccCcCchhhhHH
Confidence 999999999998731100 0 00112234678899999999988899999999
Q ss_pred chhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 805 SVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 805 SLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
||||++|||++ |..||.+.+..++...+..... +..+..+++++.+|+.+||+.||.+|| ++.+|+++
T Consensus 211 slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~l~~~c~~~~p~~Rp---~~~~i~~~ 279 (283)
T cd05048 211 SFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQL--LPCPEDCPARVYALMIECWNEIPARRP---RFKDIHTR 279 (283)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCcccCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 99999999998 9999999888888877765543 345678999999999999999999999 89998875
No 164
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.3e-40 Score=346.56 Aligned_cols=255 Identities=31% Similarity=0.532 Sum_probs=213.8
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccc----
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRE---- 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~---- 662 (1003)
.++|++.+.||.|+||.||+|.++.+++.|++|++..... ..+.+.+|+.+++.+ +||||+++++.+....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 4789999999999999999999998999999999876432 346788999999998 7999999999997644
Q ss_pred --eEEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCc
Q 001857 663 --NLYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 663 --~lyLVmEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
.+|+||||+++++|.+++.. ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 58999999999999999865 357999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHH
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILF 811 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~kSDIWSLGVILY 811 (1003)
..... .........|++.|+|||++.. ..++.++|||||||++|
T Consensus 161 ~~~~~-------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~ 209 (275)
T cd06608 161 AQLDS-------------------------------TLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI 209 (275)
T ss_pred eeccc-------------------------------chhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHH
Confidence 63100 0011234579999999999864 34678999999999999
Q ss_pred HHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 812 ELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 812 ELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+|++|++||...........+.....+....+..++.++++||.+||..||.+|| ++.++++|||+
T Consensus 210 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---t~~~ll~~~~~ 275 (275)
T cd06608 210 ELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRP---FMEELLEHPFI 275 (275)
T ss_pred HHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCc---CHHHHhcCCCC
Confidence 9999999998766655555555443322222345788999999999999999999 99999999996
No 165
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.9e-40 Score=342.79 Aligned_cols=254 Identities=31% Similarity=0.586 Sum_probs=220.3
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--cceEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RENLYLV 667 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d--~~~lyLV 667 (1003)
+|++++.||.|+||.||+|.+..++..||+|++..... .....+.+.+|+.+++.++||||+++++.+.. ...+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58999999999999999999999999999999876543 34445778899999999999999999987764 4568999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHh-----hcCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLH-----SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLH-----s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
|||+++++|.+++.. ...+++..++.++.||+.||.||| +.+|+|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999965 357899999999999999999999 89999999999999999999999999999874
Q ss_pred cccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCC
Q 001857 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 739 ~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~ 818 (1003)
.... ........|++.|+|||++.+..++.++|+||||+++|+|++|..
T Consensus 160 ~~~~-------------------------------~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 208 (265)
T cd08217 160 LGHD-------------------------------SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP 208 (265)
T ss_pred ccCC-------------------------------cccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 1100 001223578999999999998889999999999999999999999
Q ss_pred CCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 819 PFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 819 PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
||...+...+.+.+.... ++.++..++..+.+++.+||..+|.+|| ++.+|++|||+
T Consensus 209 p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p~~Rp---~~~~il~~~~~ 265 (265)
T cd08217 209 PFTARNQLQLASKIKEGK--FRRIPYRYSSELNEVIKSMLNVDPDKRP---STEELLQLPLI 265 (265)
T ss_pred cccCcCHHHHHHHHhcCC--CCCCccccCHHHHHHHHHHccCCcccCC---CHHHHhhCCCC
Confidence 999888777777766543 3456778899999999999999999999 99999999996
No 166
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2e-40 Score=350.53 Aligned_cols=257 Identities=33% Similarity=0.558 Sum_probs=210.8
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeee-----
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFT----- 659 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~----- 659 (1003)
...++|++++.||+|+||.||+|.+..+++.||+|++.... .....+.+|..++..+ +||||+++++.+.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 35578999999999999999999999999999999876532 1234577899999998 7999999999874
Q ss_pred ccceEEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCC
Q 001857 660 CRENLYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 660 d~~~lyLVmEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
..+.+|+||||++|++|.+++.. ...+++..++.++.||+.||.|||+++|+||||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~ 170 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGV 170 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCc
Confidence 44679999999999999998753 25689999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHH
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIIL 810 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~kSDIWSLGVIL 810 (1003)
++..... ........||+.|+|||++.. ..++.++|||||||++
T Consensus 171 ~~~~~~~-------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~ 219 (286)
T cd06638 171 SAQLTST-------------------------------RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITA 219 (286)
T ss_pred eeecccC-------------------------------CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHH
Confidence 8731000 011223569999999999853 4578899999999999
Q ss_pred HHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 811 FELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 811 YELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
|||++|+.||...........+..........+..++.++.+||.+||+.||.+|| ++.++++|+||
T Consensus 220 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~ell~~~~~ 286 (286)
T cd06638 220 IELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRP---TVSDLLQHVFI 286 (286)
T ss_pred HHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCC---CHHHHhhcccC
Confidence 99999999998766544443333322211123455788999999999999999999 99999999997
No 167
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-40 Score=358.04 Aligned_cols=258 Identities=34% Similarity=0.570 Sum_probs=219.5
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
...+|++++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.+.....+|+
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 34779999999999999999999999999999999875432 234667889999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
||||++|++|.+++.+ ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 94 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~---- 168 (297)
T cd06656 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---- 168 (297)
T ss_pred eecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCC----
Confidence 9999999999999865 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
........|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+..
T Consensus 169 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~ 221 (297)
T cd06656 169 ---------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL 221 (297)
T ss_pred ---------------------------ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 00112356899999999999988999999999999999999999999876654
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.....+.....+....+..++..+.+||.+||..+|.+|| ++.++++||||+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~~~~ 274 (297)
T cd06656 222 RALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRG---SAKELLQHPFLKL 274 (297)
T ss_pred hheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCchhcc
Confidence 4433333332222234567889999999999999999999 9999999999974
No 168
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.6e-41 Score=355.03 Aligned_cols=255 Identities=32% Similarity=0.533 Sum_probs=207.8
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++++.||.|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.+...+|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 48999999999999999999999999999999875432 22233567789999999999999999999999999999999
Q ss_pred eccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 670 YLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 670 y~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|+.+ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~------ 152 (284)
T cd07839 80 YCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP------ 152 (284)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC------
Confidence 9975 88888765 467999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCC-CCCChh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPF-NAEHPQ 826 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF-~~~~~~ 826 (1003)
........+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..
T Consensus 153 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~ 207 (284)
T cd07839 153 -------------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 207 (284)
T ss_pred -------------------------CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence 0011234678999999998774 4789999999999999999988875 444444
Q ss_pred hHHHhhhccC-----------------CCCC---------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRK-----------------IPWP---------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~-----------------~~~P---------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+.++.+.... ..++ .....+++++.+||++||+.||.+|| |++++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---t~~~il~h~~f 284 (284)
T cd07839 208 DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRI---SAEEALQHPYF 284 (284)
T ss_pred HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcC---CHHHHhcCCCC
Confidence 4443332110 0011 11234789999999999999999999 99999999998
No 169
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.6e-41 Score=348.22 Aligned_cols=254 Identities=33% Similarity=0.600 Sum_probs=218.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||.|+||.||+|.++.+++.||+|++..... ......+.+|+.+++.++||||+++++.+.....+|++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 468899999999999999999999999999999876532 244567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
||+++++|.+++... ..+++..+..++.||+.||+|||+ .||+|+||||+||+++.++.++|+|||++....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~------ 152 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV------ 152 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhH------
Confidence 999999999999876 789999999999999999999999 999999999999999999999999999986310
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC---
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE--- 823 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~--- 823 (1003)
........|+..|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus 153 ---------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 205 (265)
T cd06605 153 ---------------------------NSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP 205 (265)
T ss_pred ---------------------------HHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc
Confidence 00011267899999999999999999999999999999999999999754
Q ss_pred --ChhhHHHhhhccCCCCCCCCCC-CCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 824 --HPQQIFDNILNRKIPWPRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 824 --~~~ei~qkIl~~~~~~P~lp~~-iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
...+..+.+.... .+.++.. ++.++.+||.+||..||.+|| ++.+++.||||+.
T Consensus 206 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~~~ 262 (265)
T cd06605 206 PDGIFELLQYIVNEP--PPRLPSGKFSPDFQDFVNLCLIKDPRERP---SYKELLEHPFIKK 262 (265)
T ss_pred cccHHHHHHHHhcCC--CCCCChhhcCHHHHHHHHHHcCCCchhCc---CHHHHhhCchhhc
Confidence 2333444444332 2334444 899999999999999999999 9999999999974
No 170
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.3e-40 Score=356.41 Aligned_cols=257 Identities=36% Similarity=0.591 Sum_probs=221.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
..+|++++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.+...+.+|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 3679999999999999999999999999999999865432 2346778999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||++|++|..++.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~----- 168 (296)
T cd06655 95 MEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE----- 168 (296)
T ss_pred EEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccc-----
Confidence 999999999998875 46899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+...
T Consensus 169 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~ 222 (296)
T cd06655 169 --------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (296)
T ss_pred --------------------------cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 001123568999999999998889999999999999999999999998877655
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
....+.....+....+..+++.+.+||.+||..||.+|| ++.++++||||+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---t~~~il~~~~~~~ 274 (296)
T cd06655 223 ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRG---SAKELLQHPFLKL 274 (296)
T ss_pred HHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCC---CHHHHhhChHhhh
Confidence 554554433333334567899999999999999999999 9999999999974
No 171
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.7e-41 Score=372.62 Aligned_cols=251 Identities=27% Similarity=0.424 Sum_probs=202.4
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
..+|++++.||+|+||.||+|++..++..||+|+..+. ....|+.+++.++||||+++++++......|+|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 35699999999999999999999999999999985443 234689999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||+. ++|.+++.. ...+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||+++....
T Consensus 136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~----- 209 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV----- 209 (357)
T ss_pred EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc-----
Confidence 99995 588888865 46799999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC-CCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG-IPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTG-k~PF~~~~~ 825 (1003)
........||+.|+|||++.+..++.++|||||||++|||+++ .++|.....
T Consensus 210 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~ 262 (357)
T PHA03209 210 ---------------------------APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPS 262 (357)
T ss_pred ---------------------------CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCC
Confidence 0112245799999999999999999999999999999999985 444443211
Q ss_pred h---------hHHHhhhcc-C---CCCC-----------------------C----CCCCCCHHHHHHHHhhccCCcCCc
Q 001857 826 Q---------QIFDNILNR-K---IPWP-----------------------R----VPEEMSPEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 826 ~---------ei~qkIl~~-~---~~~P-----------------------~----lp~~iS~elkDLIrrcL~kDP~kR 865 (1003)
. ..+..++.. . ..++ . ....++.++.+||.+||+.||.+|
T Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 342 (357)
T PHA03209 263 TPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMR 342 (357)
T ss_pred cHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccC
Confidence 0 111111110 0 0011 0 002457788899999999999999
Q ss_pred CCCCCHHHHHcCCCCCCC
Q 001857 866 LGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 866 Pg~~TAeELLqHPFFk~I 883 (1003)
| ||.|+++||||+.+
T Consensus 343 p---ta~e~l~hp~f~~~ 357 (357)
T PHA03209 343 P---SAEEILNYPMFAQL 357 (357)
T ss_pred c---CHHHHhcCchhccC
Confidence 9 99999999999864
No 172
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.1e-40 Score=341.62 Aligned_cols=253 Identities=29% Similarity=0.516 Sum_probs=220.4
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||+|.+..++..||+|++...... ......+.+|+.+++.++||||+++++.+...+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 589999999999999999999999999999999765433 3345788899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC-CcEEEeecCCccccccCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~~~~~~~dd 746 (1003)
|++|++|.+++... ..+++..+..++.|++.||+|||++||+|+||||+||+++.+ +.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~----- 154 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS----- 154 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC-----
Confidence 99999999999764 358999999999999999999999999999999999999865 4689999999873100
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
........|++.|+|||++.+..++.++||||||+++|+|++|..||...+..
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 207 (256)
T cd08220 155 ---------------------------KSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP 207 (256)
T ss_pred ---------------------------CccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH
Confidence 00112356899999999999888899999999999999999999999988877
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.....+..... +.++..++.++.++|.+||..+|.+|| ++.++++||||
T Consensus 208 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~ll~~p~~ 256 (256)
T cd08220 208 ALVLKIMSGTF--APISDRYSPDLRQLILSMLNLDPSKRP---QLSQIMAQPIC 256 (256)
T ss_pred HHHHHHHhcCC--CCCCCCcCHHHHHHHHHHccCChhhCC---CHHHHhhCCCC
Confidence 77777665433 345667899999999999999999999 99999999997
No 173
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.4e-40 Score=347.94 Aligned_cols=275 Identities=40% Similarity=0.745 Sum_probs=229.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyLV 667 (1003)
++|++.+.||.|+||.||+|.+..++..||+|++.+...........+.+|..++..++ ||||+++++.+...+.+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998765555555678889999999998 99999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||+.+++|.+++.+.+.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 99999999999999888999999999999999999999999999999999999999999999999999874211110000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
..... . .................|+..|+|||++.+..++.++|+|||||++|+|++|..||.......
T Consensus 161 -~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 161 -NKGDA-T---------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred -CCCCC-c---------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 00000 0 000000011123345678999999999998889999999999999999999999999888777
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCH----HHHHcCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA----SEVKQHVFF 880 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TA----eELLqHPFF 880 (1003)
.++.+...... ++..+++.+.+||.+||+.+|.+|| ++ .++++||||
T Consensus 230 ~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~~~~ll~~~~~ 280 (280)
T cd05581 230 TFQKILKLEYS---FPPNFPPDAKDLIEKLLVLDPQDRL---GVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHhcCCC---CCCccCHHHHHHHHHHhcCCHhhCC---CcccCHHHHhcCCCC
Confidence 77777655443 3467899999999999999999999 88 999999998
No 174
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.7e-40 Score=349.53 Aligned_cols=255 Identities=27% Similarity=0.473 Sum_probs=211.3
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec-----
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTC----- 660 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d----- 660 (1003)
..+.|++.+.||.|+||.||+|++..+++.||+|++.... .....+..|+.++..+ +||||+++++.|..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 3467999999999999999999999999999999986542 2335677899999888 79999999999853
Q ss_pred -cceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcc
Q 001857 661 -RENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1003)
Q Consensus 661 -~~~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1003)
...+|++|||+++|+|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 45789999999999999999754 458899999999999999999999999999999999999999999999999986
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHH
Q 001857 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 738 ~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYE 812 (1003)
.... .........|++.|+|||++. +..++.++|||||||++|+
T Consensus 170 ~~~~-------------------------------~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~e 218 (282)
T cd06636 170 QLDR-------------------------------TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIE 218 (282)
T ss_pred hhhc-------------------------------cccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHH
Confidence 3100 001123467999999999986 3457889999999999999
Q ss_pred HHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 813 LIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 813 LLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
|++|.+||....+......+..... .......++.++.+||++||..||.+|| ++.+|++||||
T Consensus 219 l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~ell~~~~~ 282 (282)
T cd06636 219 MAEGAPPLCDMHPMRALFLIPRNPP-PKLKSKKWSKKFIDFIEGCLVKNYLSRP---STEQLLKHPFI 282 (282)
T ss_pred HHhCCCCccccCHHhhhhhHhhCCC-CCCcccccCHHHHHHHHHHhCCChhhCc---CHHHHhcCCCC
Confidence 9999999987665444444333221 1122346889999999999999999999 99999999998
No 175
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.1e-40 Score=342.43 Aligned_cols=258 Identities=33% Similarity=0.590 Sum_probs=223.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||.|+||.||+|++..+++.||+|++...... .....+.+|+.++..++||||+++++.+.....+|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 4699999999999999999999999999999998765422 44577889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+++++|.+++...+.+++..+..++.||+.||+|||+ .|++||||+|+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~----- 153 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT----- 153 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccC-----
Confidence 999999999999888889999999999999999999999 99999999999999999999999999998731100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC---C
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE---H 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~---~ 824 (1003)
........|+..|+|||.+.+..++.++|+||||+++|+|++|..||... .
T Consensus 154 --------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~ 207 (264)
T cd06623 154 --------------------------LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS 207 (264)
T ss_pred --------------------------CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC
Confidence 00112356889999999999988999999999999999999999999776 4
Q ss_pred hhhHHHhhhccCCCCCCCCCC-CCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~-iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
..+....+..... +..+.. ++..+.++|.+||..+|.+|| ++.++++||||+.++
T Consensus 208 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~---~~~~ll~~~~~~~~~ 263 (264)
T cd06623 208 FFELMQAICDGPP--PSLPAEEFSPEFRDFISACLQKDPKKRP---SAAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHHHHhcCCC--CCCCcccCCHHHHHHHHHHccCChhhCC---CHHHHHhCHHHHhcc
Confidence 4455555553322 334555 899999999999999999999 999999999998653
No 176
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.2e-40 Score=350.59 Aligned_cols=269 Identities=44% Similarity=0.840 Sum_probs=224.5
Q ss_pred CeEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMI-RKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk---~tgk~VALKVIkks~i~-~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~l 664 (1003)
+|++.+.||+|+||.||+|++. .+++.||+|++++.... .......+.+|+.++..+ +||||+++++.+.....+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4899999999999999999864 46789999999765432 233446788999999999 699999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||++||+|.+++.....+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||+++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE-- 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc--
Confidence 999999999999999988788999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC--CCccceeechhHHHHHHHhCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG--HGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~--ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
........+|++.|+|||.+.+.. ++.++||||||+++|+|++|..||..
T Consensus 159 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 159 ----------------------------EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred ----------------------------cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 001112356899999999987654 78899999999999999999999964
Q ss_pred CC----hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhh
Q 001857 823 EH----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQ 891 (1003)
Q Consensus 823 ~~----~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~ 891 (1003)
.. ..++.+.+.... +..+..++..+.+||.+||+.||.+||+..++.++++||||++++|+.+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~~~~~ 280 (288)
T cd05583 211 DGEQNSQSEISRRILKSK---PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDLAAK 280 (288)
T ss_pred CcccchHHHHHHHHHccC---CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHHHhhh
Confidence 32 233334443333 2345678899999999999999999997777899999999999999888654
No 177
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.5e-40 Score=342.27 Aligned_cols=250 Identities=28% Similarity=0.523 Sum_probs=217.5
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||++++..+++.||+|.++... .....+.+.+|..+++.++||||+++++.+.+.+.+|++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 5899999999999999999999999999999986543 23345678889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|+++|+|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~------ 152 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS------ 152 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecc------
Confidence 99999999988653 4589999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
.........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+...
T Consensus 153 -------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~ 207 (255)
T cd08219 153 -------------------------PGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN 207 (255)
T ss_pred -------------------------cccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH
Confidence 0011224578999999999999889999999999999999999999999888777
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
....+..... +.++..++..+.+||.+||+.||.+|| ++.+++.-
T Consensus 208 ~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~il~~ 252 (255)
T cd08219 208 LILKVCQGSY--KPLPSHYSYELRSLIKQMFKRNPRSRP---SATTILSR 252 (255)
T ss_pred HHHHHhcCCC--CCCCcccCHHHHHHHHHHHhCCcccCC---CHHHHhhc
Confidence 7777765543 335667899999999999999999999 89998864
No 178
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.9e-40 Score=340.62 Aligned_cols=255 Identities=33% Similarity=0.574 Sum_probs=219.8
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM--IRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i--~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+|+..+.||+|+||+||+|.+..++..|++|++..... ......+.+.+|+.+++.++||||+++++.+.+...+|++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47788999999999999999988999999999875432 2234567889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||++|++|.+++.+.+.+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~----- 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF----- 155 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc-----
Confidence 999999999999998888999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC-CCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-HGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~-ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
.......|++.|+|||.+.... ++.++|+|||||++|+|++|..||......
T Consensus 156 ---------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~ 208 (258)
T cd06632 156 ---------------------------SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV 208 (258)
T ss_pred ---------------------------ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH
Confidence 0122456899999999998776 899999999999999999999999876654
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.....+... ...+.++..+++.+.+||.+||+.+|.+|| ++.+++.|||+
T Consensus 209 ~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~~~~ 258 (258)
T cd06632 209 AAVFKIGRS-KELPPIPDHLSDEAKDFILKCLQRDPSLRP---TAAELLEHPFV 258 (258)
T ss_pred HHHHHHHhc-ccCCCcCCCcCHHHHHHHHHHhhcCcccCc---CHHHHhcCCCC
Confidence 444444331 234556678899999999999999999999 99999999996
No 179
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.4e-40 Score=349.87 Aligned_cols=268 Identities=42% Similarity=0.805 Sum_probs=223.2
Q ss_pred CeEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMI-RKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk---~tgk~VALKVIkks~i~-~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~l 664 (1003)
+|++.+.||.|+||.||+|++. .+|..||+|++...... .....+.+.+|+.++..+ +|+||+++++.|.....+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4899999999999999999974 47899999998764332 223346778899999999 599999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||+++++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED-- 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc--
Confidence 999999999999999988888999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.........|+..|+|||.+.+ ..++.++|||||||++|+|++|..||..
T Consensus 159 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 159 ----------------------------EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred ----------------------------cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 0001123578999999999875 3468899999999999999999999974
Q ss_pred CC----hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhh
Q 001857 823 EH----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLAR 890 (1003)
Q Consensus 823 ~~----~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~ 890 (1003)
.. ...+...+..... .++..+++.+.+||.+||..||.+|+++ .++.+++.||||..++|+.+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (290)
T cd05613 211 DGEKNSQAEISRRILKSEP---PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAA 281 (290)
T ss_pred CCccccHHHHHHHhhccCC---CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHhh
Confidence 33 2334444443332 3456789999999999999999999865 3899999999999999988743
No 180
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.2e-40 Score=351.69 Aligned_cols=257 Identities=29% Similarity=0.499 Sum_probs=213.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++++.||.|+||.||+|.+..+++.||+|++.+..... ...+.+.+|+.+++.++||||+++++++......|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 46999999999999999999999899999999987643322 34466788999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++++.|..+......+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~------ 153 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP------ 153 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC------
Confidence 99999999988877667999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........|+..|+|||++.+ ..++.++|||||||++|||++|++||......+
T Consensus 154 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~ 208 (286)
T cd07846 154 -------------------------GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID 208 (286)
T ss_pred -------------------------ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH
Confidence 011123568899999999876 447889999999999999999999998766544
Q ss_pred HHHhhhccC-------------------CCCCC---------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 828 IFDNILNRK-------------------IPWPR---------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 828 i~qkIl~~~-------------------~~~P~---------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
....+.... ...+. ....++..+.+||.+||..+|.+|| ++.++++|||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~il~~~~ 285 (286)
T cd07846 209 QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRP---SSSQLLHHEF 285 (286)
T ss_pred HHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccch---hHHHHhcCCC
Confidence 333332110 00111 1235788999999999999999999 9999999999
Q ss_pred C
Q 001857 880 F 880 (1003)
Q Consensus 880 F 880 (1003)
|
T Consensus 286 ~ 286 (286)
T cd07846 286 F 286 (286)
T ss_pred C
Confidence 8
No 181
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.6e-40 Score=347.50 Aligned_cols=252 Identities=20% Similarity=0.277 Sum_probs=212.5
Q ss_pred cCCeEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk---~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
.++|++.+.||+|+||.||+|.++ ..+..||+|+++... .......+.+|+.++..++||||+++++.+...+.+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 457999999999999999999875 346689999987642 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|+||||+++|+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||.+.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~-- 159 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS-- 159 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc--
Confidence 9999999999999999764 5789999999999999999999999999999999999999999999999998763100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
. .........+++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 160 -~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~ 211 (266)
T cd05064 160 -E---------------------------AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred -c---------------------------chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 0 0001113346778999999999999999999999999999775 9999998
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+..+..+.+.... .. ..+..++..+.+++.+||+.+|.+|| ++.+|++
T Consensus 212 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~c~~~~p~~RP---~~~~i~~ 260 (266)
T cd05064 212 MSGQDVIKAVEDGF-RL-PAPRNCPNLLHQLMLDCWQKERGERP---RFSQIHS 260 (266)
T ss_pred CCHHHHHHHHHCCC-CC-CCCCCCCHHHHHHHHHHcCCCchhCC---CHHHHHH
Confidence 88877777765443 22 34677899999999999999999999 8888765
No 182
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-40 Score=351.78 Aligned_cols=256 Identities=30% Similarity=0.524 Sum_probs=218.1
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
..++|++++.||+|+||+||+|++..+++.||+|++.... .......+.+|+.++..++||||+++++.+.....+|+
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICM 80 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEE
Confidence 3467999999999999999999999999999999986542 23345778899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
||||+++++|.+++.+.+.+++..++.++.|++.||.|||+ .||+||||||+||+++.++.++|+|||++....
T Consensus 81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~----- 155 (284)
T cd06620 81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI----- 155 (284)
T ss_pred EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchh-----
Confidence 99999999999999888889999999999999999999997 699999999999999999999999999976310
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.......+||..|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus 156 ----------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~ 207 (284)
T cd06620 156 ----------------------------NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNI 207 (284)
T ss_pred ----------------------------hhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccch
Confidence 0011235799999999999888899999999999999999999999986543
Q ss_pred h-----------hHHHhhhccCCCCCCCCC-CCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 826 Q-----------QIFDNILNRKIPWPRVPE-EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 826 ~-----------ei~qkIl~~~~~~P~lp~-~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
. +....+..... +.++. .++.++.+||.+||.+||.+|| ++.|+++|+||..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rp---t~~e~~~~~~~~~ 271 (284)
T cd06620 208 DDDGQDDPMGILDLLQQIVQEPP--PRLPSSDFPEDLRDFVDACLLKDPTERP---TPQQLCAMPPFIQ 271 (284)
T ss_pred hhhhhhhhhHHHHHHHHHhhccC--CCCCchhcCHHHHHHHHHHhcCCcccCc---CHHHHhcCccccc
Confidence 2 23333333221 22222 3788999999999999999999 9999999999953
No 183
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.7e-40 Score=353.11 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=206.4
Q ss_pred cCCeEEEEEeeccCceEEEEEEECC----------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRT----------------TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV 651 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~----------------tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNI 651 (1003)
.++|++.++||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+|..++||||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCe
Confidence 3679999999999999999998632 34479999987542 24445678999999999999999
Q ss_pred EEEEeeeeccceEEEEEEeccCCChHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHhhcCcee
Q 001857 652 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-------------------CLDEDVARVYIAEVVLALEYLHSLRVVH 712 (1003)
Q Consensus 652 VkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g-------------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIH 712 (1003)
+++++++.+.+.+|+||||+.+|+|.+++.... .++...+..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999999986532 3577788999999999999999999999
Q ss_pred ccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhh
Q 001857 713 RDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEIL 792 (1003)
Q Consensus 713 RDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL 792 (1003)
|||||+|||++.++.+||+|||+++...... .........+++.|||||++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~ 212 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGD-----------------------------YYRIQGRAVLPIRWMAWECI 212 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCc-----------------------------eeEecCcCCCCccccCHHHH
Confidence 9999999999999999999999987310000 00111234568899999999
Q ss_pred ccCCCCccceeechhHHHHHHHh--CCCCCCCCChhhHHHhhhcc-----CCCCCCCCCCCCHHHHHHHHhhccCCcCCc
Q 001857 793 LGTGHGTTADWWSVGIILFELIV--GIPPFNAEHPQQIFDNILNR-----KIPWPRVPEEMSPEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 793 ~g~~ys~kSDIWSLGVILYELLT--Gk~PF~~~~~~ei~qkIl~~-----~~~~P~lp~~iS~elkDLIrrcL~kDP~kR 865 (1003)
.+..++.++|||||||++|||++ +..||...+..+....+... ...++..+..++..+.+||.+||+.||.+|
T Consensus 213 ~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 292 (304)
T cd05096 213 LMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRER 292 (304)
T ss_pred hcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhC
Confidence 98889999999999999999986 67889877666655443221 111222345688999999999999999999
Q ss_pred CCCCCHHHHHc
Q 001857 866 LGSGGASEVKQ 876 (1003)
Q Consensus 866 Pg~~TAeELLq 876 (1003)
| ++.+|.+
T Consensus 293 P---s~~~i~~ 300 (304)
T cd05096 293 P---SFSDIHA 300 (304)
T ss_pred c---CHHHHHH
Confidence 9 8888843
No 184
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.9e-40 Score=346.97 Aligned_cols=257 Identities=34% Similarity=0.556 Sum_probs=214.5
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||+|.+..+|..||+|++...... ......+.+|+.+++.++||||+++++++.....+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 589999999999999999999999999999998765432 3345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 670 YLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 670 y~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|+ |++|.+++... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~----- 153 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE----- 153 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC-----
Confidence 99 99999998653 569999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.....
T Consensus 154 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~ 208 (286)
T cd07832 154 -------------------------PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE 208 (286)
T ss_pred -------------------------CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH
Confidence 0012235789999999998764 46899999999999999999999998776655
Q ss_pred HHHhhhccCC-------------------CCC--------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 828 IFDNILNRKI-------------------PWP--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 828 i~qkIl~~~~-------------------~~P--------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.+..++.... .++ ......+.++.+||++||.++|.+|| +++++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~l~h~~~ 285 (286)
T cd07832 209 QLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRL---SAAEALRHPYF 285 (286)
T ss_pred HHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCC---CHHHHhhCcCc
Confidence 5544433110 011 11134678999999999999999999 99999999999
Q ss_pred C
Q 001857 881 K 881 (1003)
Q Consensus 881 k 881 (1003)
.
T Consensus 286 ~ 286 (286)
T cd07832 286 T 286 (286)
T ss_pred C
Confidence 4
No 185
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=366.61 Aligned_cols=288 Identities=27% Similarity=0.500 Sum_probs=235.6
Q ss_pred eEEE-EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEE
Q 001857 591 FEII-KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 591 YeIl-k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
|++. +.||+|+|+.|--|....+|..||||++.|.. .....++.+|++++..+ .|+||++|+++|+++.++||||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 5543 57999999999999999999999999998863 34457889999999988 5999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC---cEEEeecCCccccccCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---HIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---~VKLiDFGLAk~~~~~~~d 745 (1003)
|-|.||.|..+|.+...|+|.++..++.+|+.||+|||.+||.||||||+|||...-. -||||||.|..- ..-++
T Consensus 156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg--~k~~~ 233 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG--IKLNN 233 (463)
T ss_pred ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc--cccCC
Confidence 9999999999999999999999999999999999999999999999999999997654 489999998752 11111
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHHHHhCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
+.+ +. ......+.||+..|||||+.. ...|+.++|.||||+|+|-||.|.+||
T Consensus 234 ~~s-pa---------------------stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPF 291 (463)
T KOG0607|consen 234 DCS-PA---------------------STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPF 291 (463)
T ss_pred CCC-CC---------------------CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCc
Confidence 111 11 012235689999999999874 245899999999999999999999999
Q ss_pred CCC---------------ChhhHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 821 NAE---------------HPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 821 ~~~---------------~~~ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
.+. -...+++.|..+++.||+ -+..+|.+++|||+.+|.+|+.+|+ +|.++++|||+..+.
T Consensus 292 vG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rl---sa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 292 VGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRL---SAAQVLNHPWVQRCA 368 (463)
T ss_pred cCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhh---hhhhccCCccccccc
Confidence 653 246789999999999985 3567999999999999999999999 999999999998764
Q ss_pred hhHHhhhcCCccCCCCCCCCCCCcc
Q 001857 885 WDTLARQKAAFVPTSESALDTSYFT 909 (1003)
Q Consensus 885 wd~L~~~k~pfvP~~~s~lDts~F~ 909 (1003)
-+... ..++.+-...+..+.+.|.
T Consensus 369 ~ekal-ptp~v~~r~~s~~~lslfa 392 (463)
T KOG0607|consen 369 PEKAL-PTPQVLQRNSSTMDLSLFA 392 (463)
T ss_pred hhccC-CCCcccccCccchhhHHHH
Confidence 44111 1233333333334555554
No 186
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7.8e-40 Score=344.87 Aligned_cols=258 Identities=32% Similarity=0.546 Sum_probs=208.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHH-HHhcCCCcEEEEEeeeeccceEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDI-LISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~I-L~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
++|++++.||+|+||.||+|++..+|+.||+|++++... .... ..+..|..+ ++.++||||+++++++.....+|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~-~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-SQEQ-KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-cHHH-HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 479999999999999999999999999999999876432 2222 344556554 6667999999999999999999999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhc-CceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSL-RVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~-GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
|||++ |+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~- 156 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD- 156 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccc-
Confidence 99997 588877754 24689999999999999999999997 999999999999999999999999999873100
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc----CCCCccceeechhHHHHHHHhCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG----TGHGTTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g----~~ys~kSDIWSLGVILYELLTGk~ 818 (1003)
........|+..|+|||++.+ ..++.++|+|||||++|+|++|+.
T Consensus 157 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 205 (283)
T cd06617 157 -------------------------------SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRF 205 (283)
T ss_pred -------------------------------ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCC
Confidence 001122468899999999865 457889999999999999999999
Q ss_pred CCCCC-ChhhHHHhhhccCCCCCCCC-CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChh
Q 001857 819 PFNAE-HPQQIFDNILNRKIPWPRVP-EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD 886 (1003)
Q Consensus 819 PF~~~-~~~ei~qkIl~~~~~~P~lp-~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd 886 (1003)
||... ...+....+..... +.++ ..+|.++.+||.+||..+|.+|| ++.++++||||....+.
T Consensus 206 p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~~ 270 (283)
T cd06617 206 PYDSWKTPFQQLKQVVEEPS--PQLPAEKFSPEFQDFVNKCLKKNYKERP---NYPELLQHPFFELHLSK 270 (283)
T ss_pred CCCccccCHHHHHHHHhcCC--CCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCchhhhcccc
Confidence 99643 22233333333221 2222 35789999999999999999999 99999999999976654
No 187
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.7e-40 Score=342.12 Aligned_cols=255 Identities=29% Similarity=0.474 Sum_probs=215.0
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+++|++.+.||.|+||.||+|++..+++.||||.+.............+.+|+.+++.++||||+++++.+.+.+..|+|
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 36899999999999999999999999999999998765555566667889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~-- 158 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-- 158 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccc--
Confidence 999999999988853 34589999999999999999999999999999999999999999999999999874100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
.........|++.|+|||.+.+..++.++|+||||+++|||++|..||...
T Consensus 159 -----------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 159 -----------------------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred -----------------------------hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 001112357899999999999888999999999999999999999999654
Q ss_pred C--hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 824 H--PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 824 ~--~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
. .......+..... .+..+..++..+.+||.+||..+|.+|| ++.++++.
T Consensus 210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~vl~~ 261 (267)
T cd08228 210 KMNLFSLCQKIEQCDY-PPLPTEHYSEKLRELVSMCIYPDPDQRP---DIGYVHQI 261 (267)
T ss_pred cccHHHHHHHHhcCCC-CCCChhhcCHHHHHHHHHHCCCCcccCc---CHHHHHHH
Confidence 3 2344444433222 1222346788999999999999999999 89888864
No 188
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.9e-40 Score=344.55 Aligned_cols=259 Identities=32% Similarity=0.543 Sum_probs=214.5
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc-------cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-------RKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~-------~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
.|.+.+.||.|+||.||+|.+..+|+.||+|.++..... .....+.+.+|+.++..++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 488899999999999999999989999999988642211 1223467888999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
.+|+||||++|++|.+++.+.+.+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~- 160 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD- 160 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc-
Confidence 9999999999999999999888899999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC--CCccceeechhHHHHHHHhCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG--HGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~--ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
.. .........|+..|+|||++.+.. ++.++|+||||+++|+|++|..||
T Consensus 161 ---~~-------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~ 212 (272)
T cd06629 161 ---IY-------------------------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPW 212 (272)
T ss_pred ---cc-------------------------cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCC
Confidence 00 001123456899999999998754 789999999999999999999999
Q ss_pred CCCChhhHHHhhhccCC--CCC-CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 821 NAEHPQQIFDNILNRKI--PWP-RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~--~~P-~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
...........+..... .++ .....++.++.+||.+||.++|.+|| ++.++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~~~ 272 (272)
T cd06629 213 SDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRP---TARELLQHPFI 272 (272)
T ss_pred cCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCC---CHHHHhhCCCC
Confidence 76555443333332221 111 12235689999999999999999999 99999999997
No 189
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.7e-40 Score=352.22 Aligned_cols=259 Identities=32% Similarity=0.516 Sum_probs=215.2
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI--RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~--~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+|++.+.||.|+||.||+|.+..+++.||+|.+...... .......+.+|+.+++.++|+||+++++++.+.+.+|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488999999999999999999999999999999765433 122345677899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||+ +|+|.+++.... .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~---- 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP---- 155 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC----
Confidence 9999 889999998766 7999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
........+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.
T Consensus 156 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~ 208 (298)
T cd07841 156 ---------------------------NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD 208 (298)
T ss_pred ---------------------------CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc
Confidence 011123457889999999865 4578999999999999999999999987776
Q ss_pred hhHHHhhhccCCC-------------------------CCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 826 QQIFDNILNRKIP-------------------------WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 826 ~ei~qkIl~~~~~-------------------------~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.+.+.++...... ........+..+.+||.+||.+||.+|| ++.++++|+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---s~~e~l~~~~~ 285 (298)
T cd07841 209 IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRI---TARQALEHPYF 285 (298)
T ss_pred HHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCc---CHHHHhhCccc
Confidence 5555554321100 0001234578999999999999999999 99999999999
Q ss_pred CCC
Q 001857 881 KDI 883 (1003)
Q Consensus 881 k~I 883 (1003)
++.
T Consensus 286 ~~~ 288 (298)
T cd07841 286 SND 288 (298)
T ss_pred cCC
Confidence 863
No 190
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=364.60 Aligned_cols=253 Identities=32% Similarity=0.545 Sum_probs=219.6
Q ss_pred ccCCeEEE-EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec----
Q 001857 587 SIDDFEII-KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTC---- 660 (1003)
Q Consensus 587 ~lddYeIl-k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d---- 660 (1003)
..++|.+- ++||-|-.|+|..|.++.||+.+|+|++.-. ....+|+++.... .|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 45778775 6799999999999999999999999998643 3456788876554 69999999998875
Q ss_pred cceEEEEEEeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC---CCcEEEeecCC
Q 001857 661 RENLYLVMEYLNGGDLYSLLRNLGC--LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH---DGHIKLTDFGL 735 (1003)
Q Consensus 661 ~~~lyLVmEy~~GGSL~d~L~~~g~--L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~---dG~VKLiDFGL 735 (1003)
...+.+|||.|+||+|+..++..+. |+|.++..|++||+.|+.|||+.+|.||||||+|+|+.. |..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 4578999999999999999987754 999999999999999999999999999999999999975 45799999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT 815 (1003)
|+.... .....+.|-||+|.|||++....|+..+|+|||||+||-||+
T Consensus 211 AK~t~~--------------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLC 258 (400)
T KOG0604|consen 211 AKETQE--------------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 258 (400)
T ss_pred ccccCC--------------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhc
Confidence 994110 112346799999999999999999999999999999999999
Q ss_pred CCCCCCCCC----hhhHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 816 GIPPFNAEH----PQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 816 Gk~PF~~~~----~~ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
|.+||+... ...+..+|..+.+.||. -+..+|+.++|+|+.+|..+|.+|+ |+.++++|||...
T Consensus 259 GyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRl---TI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 259 GYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERL---TIEEVMDHPWINQ 327 (400)
T ss_pred CCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhe---eHHHhhcCchhcc
Confidence 999998643 34678899999999885 3467899999999999999999999 9999999999974
No 191
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.3e-39 Score=338.52 Aligned_cols=258 Identities=37% Similarity=0.632 Sum_probs=216.7
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||+|+||.||+|.+..+++.||+|+++..... ......+.+|+.+++.++|+||+++++.+...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 489999999999999999999889999999999866433 4567889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
|+++++|.+++...+.+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~---- 155 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT---- 155 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc----
Confidence 9999999999988778999999999999999999999999999999999999999999999999998742110000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC---CCccceeechhHHHHHHHhCCCCCCCCC-h
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG---HGTTADWWSVGIILFELIVGIPPFNAEH-P 825 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~---ys~kSDIWSLGVILYELLTGk~PF~~~~-~ 825 (1003)
.........|++.|+|||++.+.. ++.++|||||||++|+|++|..||.... .
T Consensus 156 -----------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~ 212 (264)
T cd06626 156 -----------------------MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE 212 (264)
T ss_pred -----------------------ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch
Confidence 000012356889999999998766 8899999999999999999999997653 2
Q ss_pred hhHHHhhhccCCCCCCCCC--CCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPE--EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~--~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
......+... ..+.++. .+++.+.+||.+||+.+|.+|| ++.+++.|||+
T Consensus 213 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~i~~~~~~ 264 (264)
T cd06626 213 FQIMFHVGAG--HKPPIPDSLQLSPEGKDFLDRCLESDPKKRP---TASELLQHPFV 264 (264)
T ss_pred HHHHHHHhcC--CCCCCCcccccCHHHHHHHHHHccCCcccCC---CHHHHhcCCCC
Confidence 2222222222 2223333 3489999999999999999999 99999999996
No 192
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.6e-40 Score=347.94 Aligned_cols=249 Identities=31% Similarity=0.542 Sum_probs=203.5
Q ss_pred CCeEEEEEe--eccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeeccceEE
Q 001857 589 DDFEIIKPI--SRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 589 ddYeIlk~L--G~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~-L~HPNIVkL~~~f~d~~~ly 665 (1003)
++|++.+.+ |.|+||.||+++++.++..||+|++.+...... |...... .+||||+++++.|...+.+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--------e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--------EPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--------hHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 456676666 999999999999999999999999876432111 2222221 27999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC-cEEEeecCCccccccCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~~~~ 744 (1003)
+||||++|++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+||+++.++ .++|+|||+++...
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~---- 161 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG---- 161 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC----
Confidence 9999999999999998878999999999999999999999999999999999999999998 99999999986310
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
......||+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 162 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~ 210 (267)
T PHA03390 162 -------------------------------TPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE 210 (267)
T ss_pred -------------------------------CCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 0112468999999999999899999999999999999999999998654
Q ss_pred hhhHH-HhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 825 PQQIF-DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 825 ~~ei~-qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
...+. ..+..........+..+++.+.+||.+||+.+|.+|+. +++++++||||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~--~~~~~l~h~~~~~ 267 (267)
T PHA03390 211 DEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLT--NYNEIIKHPFLKI 267 (267)
T ss_pred cchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCc--hHHHHhcCCcccC
Confidence 33221 11111111122344578999999999999999999992 3599999999974
No 193
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.1e-40 Score=348.33 Aligned_cols=257 Identities=29% Similarity=0.562 Sum_probs=207.0
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.+++|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTL 80 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEE
Confidence 35789999999999999999999998999999999875432 1122346789999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
||||+.+ +|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 156 (291)
T cd07844 81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP--- 156 (291)
T ss_pred EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC---
Confidence 9999985 999988764 46899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........+++.|+|||++.+ ..++.++|||||||++|+|++|++||....
T Consensus 157 ----------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 157 ----------------------------SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred ----------------------------CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 000112357889999999876 458899999999999999999999997654
Q ss_pred -hhhHHHhhhccC-------------------CCCC--------CCCCCCC--HHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 825 -PQQIFDNILNRK-------------------IPWP--------RVPEEMS--PEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 825 -~~ei~qkIl~~~-------------------~~~P--------~lp~~iS--~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
..+....+.... ..++ .....++ .++.++|.+||+.+|.+|| ++.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rp---s~~e~ 285 (291)
T cd07844 209 DVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRI---SAAEA 285 (291)
T ss_pred cHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCccccc---CHHHH
Confidence 222222211100 0000 0011234 8899999999999999999 99999
Q ss_pred HcCCCC
Q 001857 875 KQHVFF 880 (1003)
Q Consensus 875 LqHPFF 880 (1003)
++||||
T Consensus 286 l~~~~f 291 (291)
T cd07844 286 MKHPYF 291 (291)
T ss_pred hcCCCC
Confidence 999998
No 194
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.3e-40 Score=348.34 Aligned_cols=258 Identities=33% Similarity=0.569 Sum_probs=222.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
..|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++.+.+...+|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 458889999999999999999999999999999875432 344578889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++||+|.+++.. +.+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~------ 154 (277)
T cd06640 82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT------ 154 (277)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCC------
Confidence 99999999999875 57899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
........|+..|+|||++.+..++.++|+|||||++|||++|.+||....+...
T Consensus 155 -------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~ 209 (277)
T cd06640 155 -------------------------QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV 209 (277)
T ss_pred -------------------------ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH
Confidence 0011235688999999999988899999999999999999999999988777666
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCCh
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idw 885 (1003)
...+.... .+.++..++..+.+||.+||..+|.+|| ++.++++|+||.....
T Consensus 210 ~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~ 261 (277)
T cd06640 210 LFLIPKNN--PPTLTGEFSKPFKEFIDACLNKDPSFRP---TAKELLKHKFIVKNAK 261 (277)
T ss_pred hhhhhcCC--CCCCchhhhHHHHHHHHHHcccCcccCc---CHHHHHhChHhhhcch
Confidence 55543332 2445667889999999999999999999 9999999999986544
No 195
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.5e-39 Score=341.42 Aligned_cols=255 Identities=30% Similarity=0.454 Sum_probs=208.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+.+.....||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++...+.+|+||
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 34445568999999999999999999999999887543 334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-CCcEEEeecCCccccccCCC
Q 001857 669 EYLNGGDLYSLLRNL-GCL--DEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~-g~L--~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||+++++|.+++... ..+ ++..+..++.||+.||+|||++||+||||||+||+++. ++.++|+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-- 162 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI-- 162 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC--
Confidence 999999999999764 455 88889999999999999999999999999999999976 679999999998631000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC--CCccceeechhHHHHHHHhCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG--HGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~--ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
........|++.|+|||++.+.. ++.++|+||||+++|+|++|.+||..
T Consensus 163 -----------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 163 -----------------------------NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred -----------------------------CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 00112245889999999987643 78999999999999999999999975
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.................+.++..+++++.+||.+||..+|.+|| ++.+++.||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~ll~~~~~ 268 (268)
T cd06624 214 LGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRA---SAHDLLQDPFL 268 (268)
T ss_pred ccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCC---CHHHHHhCCCC
Confidence 43221111111111122456677899999999999999999999 99999999997
No 196
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.6e-40 Score=345.13 Aligned_cols=258 Identities=32% Similarity=0.550 Sum_probs=214.2
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||.|+||.||+|.++.+++.||+|+++.... .......+.+|+.+++.++|+||+++++.+...+.+|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 369999999999999999999999999999999875432 2334577889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||++++.|..++.+...+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~----- 154 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP----- 154 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc-----
Confidence 999987777777666779999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........|+..|+|||++.+. .++.++||||||+++|+|++|.+||.+....+
T Consensus 155 -------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~ 209 (288)
T cd07833 155 -------------------------ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID 209 (288)
T ss_pred -------------------------cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0012245788999999999887 88999999999999999999999998765543
Q ss_pred HHHhhhccCC-------------------CCC----------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCC
Q 001857 828 IFDNILNRKI-------------------PWP----------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHV 878 (1003)
Q Consensus 828 i~qkIl~~~~-------------------~~P----------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHP 878 (1003)
....+..... .++ ..+..++.++.+||++||..+|.+|| ++.++++||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~~ 286 (288)
T cd07833 210 QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERL---TCDELLQHP 286 (288)
T ss_pred HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcc---cHHHHhcCC
Confidence 3322211000 000 12234589999999999999999999 999999999
Q ss_pred CC
Q 001857 879 FF 880 (1003)
Q Consensus 879 FF 880 (1003)
||
T Consensus 287 ~f 288 (288)
T cd07833 287 YF 288 (288)
T ss_pred CC
Confidence 98
No 197
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1e-39 Score=352.00 Aligned_cols=254 Identities=25% Similarity=0.400 Sum_probs=212.1
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCE--EEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDL--FAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR 661 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~--VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~ 661 (1003)
...+++|++.+.||+|+||.||+|+++.++.. +|+|.++. .........+.+|+.++..+ +||||+++++++...
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~ 80 (303)
T cd05088 3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 80 (303)
T ss_pred ccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC
Confidence 34568999999999999999999999877765 46665543 22344557788999999999 899999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD 725 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~g----------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d 725 (1003)
+.+|+||||+++|+|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 160 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence 99999999999999999997543 47899999999999999999999999999999999999999
Q ss_pred CcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeec
Q 001857 726 GHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWS 805 (1003)
Q Consensus 726 G~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWS 805 (1003)
+.+||+|||+++.... ........++..|+|||++.+..++.++||||
T Consensus 161 ~~~kl~dfg~~~~~~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 208 (303)
T cd05088 161 YVAKIADFGLSRGQEV--------------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 208 (303)
T ss_pred CcEEeCccccCcccch--------------------------------hhhcccCCCcccccCHHHHhccCCcccccchh
Confidence 9999999999862000 00011223467899999998888999999999
Q ss_pred hhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 806 VGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 806 LGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|||++|||+| |.+||...+..+.++.+.... .+..+..++.++.+||.+||+.+|.+|| ++.+++++
T Consensus 209 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~ 276 (303)
T cd05088 209 YGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVYDLMRQCWREKPYERP---SFAQILVS 276 (303)
T ss_pred hhhHHHHHHhcCCCCcccCChHHHHHHHhcCC--cCCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 9999999998 999998887777776664332 1234556889999999999999999999 89998886
No 198
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.9e-40 Score=353.95 Aligned_cols=249 Identities=25% Similarity=0.459 Sum_probs=191.7
Q ss_pred EEeeccCceEEEEEEECC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--cceEEEEEEe
Q 001857 595 KPISRGAFGRVFLAKKRT--TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RENLYLVMEY 670 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~--tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d--~~~lyLVmEy 670 (1003)
.+||+|+||+||+|+++. ++..||+|.+..... ...+.+|+.+++.++||||+++++++.. ...+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 568999999875432 2356789999999999999999998854 5678999999
Q ss_pred ccCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceee----cCCCcEEEeecCCcc
Q 001857 671 LNGGDLYSLLRNL---------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI----AHDGHIKLTDFGLSK 737 (1003)
Q Consensus 671 ~~GGSL~d~L~~~---------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL----d~dG~VKLiDFGLAk 737 (1003)
+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 865 888877522 248899999999999999999999999999999999999 456899999999997
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhC
Q 001857 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVG 816 (1003)
Q Consensus 738 ~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTG 816 (1003)
...... .........+||+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 161 ~~~~~~----------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg 212 (317)
T cd07867 161 LFNSPL----------------------------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 212 (317)
T ss_pred ccCCCc----------------------------ccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhC
Confidence 411000 00011234678999999999987 4579999999999999999999
Q ss_pred CCCCCCCChhh---------HHHhhhcc--------------CCCC---------------------CCCCCCCCHHHHH
Q 001857 817 IPPFNAEHPQQ---------IFDNILNR--------------KIPW---------------------PRVPEEMSPEAHD 852 (1003)
Q Consensus 817 k~PF~~~~~~e---------i~qkIl~~--------------~~~~---------------------P~lp~~iS~elkD 852 (1003)
++||....... ....+... ...+ .......+..+.+
T Consensus 213 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (317)
T cd07867 213 EPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFL 292 (317)
T ss_pred CCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHH
Confidence 99997543210 01111000 0000 0011124567899
Q ss_pred HHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 853 LIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 853 LIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
||.+||+.||.+|| |+.|+++||||
T Consensus 293 ll~~~l~~dP~~R~---t~~e~l~hp~f 317 (317)
T cd07867 293 LLQKLLTMDPTKRI---TSEQALQDPYF 317 (317)
T ss_pred HHHHHhccCccccc---CHHHHhcCCCC
Confidence 99999999999999 99999999998
No 199
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.3e-40 Score=369.21 Aligned_cols=258 Identities=25% Similarity=0.366 Sum_probs=210.6
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~t-----gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~ 657 (1003)
+....++|++.+.||+|+||.||+|++..+ +..||+|+++... .......+.+|+.+++.+ +||||++++++
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~ 110 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGA 110 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence 455567899999999999999999986543 3579999997643 233456788999999999 89999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhc------------------------------------------------------
Q 001857 658 FTCRENLYLVMEYLNGGDLYSLLRNL------------------------------------------------------ 683 (1003)
Q Consensus 658 f~d~~~lyLVmEy~~GGSL~d~L~~~------------------------------------------------------ 683 (1003)
+.....+|+|||||++|+|.+++...
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 99999999999999999999998642
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 684 ----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 684 ----------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
.++++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~--- 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN--- 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc---
Confidence 1367888999999999999999999999999999999999999999999999873110000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQ 826 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ 826 (1003)
........+++.|||||++.+..++.++|||||||++|||++ |+.||......
T Consensus 268 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~ 321 (374)
T cd05106 268 --------------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN 321 (374)
T ss_pred --------------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Confidence 001122345678999999999899999999999999999997 99999876655
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..+..+...... +..+..+++++.++|.+||+.||.+|| ++.++++
T Consensus 322 ~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RP---s~~~l~~ 367 (374)
T cd05106 322 SKFYKMVKRGYQ-MSRPDFAPPEIYSIMKMCWNLEPTERP---TFSQISQ 367 (374)
T ss_pred HHHHHHHHcccC-ccCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 444444444332 234556789999999999999999999 8888765
No 200
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2e-39 Score=333.16 Aligned_cols=254 Identities=33% Similarity=0.651 Sum_probs=223.8
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||+|.+..++..||+|++..... .......+.+|+++++.++|||++++++.+......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58999999999999999999998999999999876543 23445678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 670 YLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 670 y~~GGSL~d~L~~~----g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|+++++|.+++.+. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~--- 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST--- 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccC---
Confidence 99999999999764 67999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 208 (258)
T cd08215 157 ----------------------------VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL 208 (258)
T ss_pred ----------------------------cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH
Confidence 0012235789999999999998899999999999999999999999988887
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
..+...+.... .+.++..++.++.++|.+||..+|.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 258 (258)
T cd08215 209 LELALKILKGQ--YPPIPSQYSSELRNLVSSLLQKDPEERP---SIAQILQSPFI 258 (258)
T ss_pred HHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHhcCCCC
Confidence 77777766544 3456678899999999999999999999 99999999998
No 201
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.4e-39 Score=347.39 Aligned_cols=256 Identities=31% Similarity=0.561 Sum_probs=219.9
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.|...+.||.|+||.||++.+..+++.+|+|++.... ....+.+.+|+.+++.++||||+++++++...+..|+++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 4566689999999999999999999999999886432 2334568899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
|+.|++|.+++.. +.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~------- 168 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE------- 168 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-------
Confidence 9999999999987 67999999999999999999999999999999999999999999999999987631000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~ 829 (1003)
........|++.|+|||++.+..++.++|||||||++|+|++|..||...++....
T Consensus 169 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~ 224 (285)
T cd06648 169 ------------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM 224 (285)
T ss_pred ------------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH
Confidence 01112356899999999999888999999999999999999999999888877777
Q ss_pred HhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 830 DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 830 qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
..+.....+....+..++..+.+||++||+.+|.+|| ++.++++||||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~~ 275 (285)
T cd06648 225 KRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRA---TAAELLNHPFLAKA 275 (285)
T ss_pred HHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCc---CHHHHccCcccccC
Confidence 7766553333333344789999999999999999999 99999999999853
No 202
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-39 Score=345.85 Aligned_cols=255 Identities=23% Similarity=0.421 Sum_probs=213.9
Q ss_pred ccCCeEEEEEeeccCceEEEEEEEC----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKR----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
.+++|++.+.||+|+||+||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 4578999999999999999999853 456789999987532 2344567889999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL-----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD 725 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~-----------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d 725 (1003)
..|+||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 999999999999999998532 237888899999999999999999999999999999999999
Q ss_pred CcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeec
Q 001857 726 GHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWS 805 (1003)
Q Consensus 726 G~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWS 805 (1003)
+.+||+|||+++...... .........++..|+|||++.+..++.++||||
T Consensus 161 ~~~kl~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 211 (283)
T cd05090 161 LHVKISDLGLSREIYSAD-----------------------------YYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWS 211 (283)
T ss_pred CcEEeccccccccccCCc-----------------------------ceecccCCCccceecChHHhccCCCCchhhhHH
Confidence 999999999987411000 001123345678899999999888999999999
Q ss_pred hhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 806 VGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 806 LGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|||++|||++ |.+||.+.....+.+.+..... +..+..+++.+.++|.+||+.||.+|| ++.+|+++
T Consensus 212 lG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~i~~~ 279 (283)
T cd05090 212 FGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQL--LPCSEDCPPRMYSLMTECWQEGPSRRP---RFKDIHTR 279 (283)
T ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCc---CHHHHHHH
Confidence 9999999998 9999988877777666655432 345677899999999999999999999 88888765
No 203
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.7e-40 Score=361.09 Aligned_cols=256 Identities=28% Similarity=0.467 Sum_probs=210.4
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR----- 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~----- 661 (1003)
..++|++++.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||++++++|...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 34679999999999999999999999999999999865432 233445677899999999999999999988654
Q ss_pred -ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 662 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 662 -~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
.++|+||||+.+ +|.+.+... +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 357999999965 898888654 8999999999999999999999999999999999999999999999999987310
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 170 ~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf 217 (353)
T cd07850 170 T--------------------------------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLF 217 (353)
T ss_pred C--------------------------------CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCC
Confidence 0 00112356899999999999999999999999999999999999999
Q ss_pred CCCChhhHHHhhhccCCC------------------------------------CCC----CCCCCCHHHHHHHHhhccC
Q 001857 821 NAEHPQQIFDNILNRKIP------------------------------------WPR----VPEEMSPEAHDLIDRFLTE 860 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~------------------------------------~P~----lp~~iS~elkDLIrrcL~k 860 (1003)
...+....+..+...... ++. .+...+..+.+||.+||+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 297 (353)
T cd07850 218 PGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVI 297 (353)
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCC
Confidence 877654444443321000 000 0113466789999999999
Q ss_pred CcCCcCCCCCHHHHHcCCCCC
Q 001857 861 DPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 861 DP~kRPg~~TAeELLqHPFFk 881 (1003)
||.+|| ++.|+|+||||+
T Consensus 298 dP~~R~---t~~eiL~~~~~~ 315 (353)
T cd07850 298 DPEKRI---SVDDALQHPYIN 315 (353)
T ss_pred ChhhCc---CHHHHhcChhHh
Confidence 999999 999999999997
No 204
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.4e-40 Score=345.03 Aligned_cols=253 Identities=26% Similarity=0.449 Sum_probs=214.7
Q ss_pred cCCeEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~-----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
.++|.+.+.||+|+||.||+|.+.. ++..||+|+++... .......+.+|+.+|..++||||+++++.+....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 4679999999999999999998753 46789999987543 2334578899999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcE
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLG--------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHI 728 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g--------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~V 728 (1003)
..|+||||++|++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999999999997643 37888999999999999999999999999999999999999999
Q ss_pred EEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhH
Q 001857 729 KLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGI 808 (1003)
Q Consensus 729 KLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGV 808 (1003)
||+|||+++..... .. ........+++.|+|||++.+..++.++|||||||
T Consensus 162 kl~d~g~~~~~~~~--~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 212 (280)
T cd05049 162 KIGDFGMSRDVYTT--DY---------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 212 (280)
T ss_pred EECCcccceecccC--cc---------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHH
Confidence 99999998731100 00 00112345678999999999999999999999999
Q ss_pred HHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 809 ILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 809 ILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
++|||++ |..||...+..+....+..+.. +..+..++..+.+||++||+.||.+|| ++.|+++
T Consensus 213 il~e~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~eil~ 276 (280)
T cd05049 213 VLWEIFTYGKQPWYGLSNEEVIECITQGRL--LQRPRTCPSEVYDIMLGCWKRDPQQRI---NIKDIHE 276 (280)
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCcccCC---CHHHHHH
Confidence 9999998 9999988888887777765543 334567899999999999999999999 8888875
No 205
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=5.6e-40 Score=346.81 Aligned_cols=255 Identities=31% Similarity=0.539 Sum_probs=209.7
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++++.||.|+||.||+|++..+++.||||.+..... .......+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48999999999999999999999999999998865432 22233578889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|+. ++|..++... +.+++..+..++.||+.||+|||++||+|+||+|+||+++.++.+||+|||+++.....
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~----- 153 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP----- 153 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC-----
Confidence 996 5899888653 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC-CCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-HGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~-ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
........+++.|+|||++.+.. ++.++|||||||++|+|+||+.||...+..
T Consensus 154 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~ 207 (284)
T cd07860 154 --------------------------VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 207 (284)
T ss_pred --------------------------ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 00112345788999999987644 588999999999999999999999877654
Q ss_pred hHHHhhhccCC------------------CCC--------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKI------------------PWP--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~------------------~~P--------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
....++..... .++ .....+++++++||.+||+.||.+|| ++.++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~~l~~~~f 284 (284)
T cd07860 208 DQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI---SAKAALAHPFF 284 (284)
T ss_pred HHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCC---CHHHHhcCCCC
Confidence 44333322110 011 11234788999999999999999999 99999999998
No 206
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.5e-39 Score=330.17 Aligned_cols=257 Identities=36% Similarity=0.595 Sum_probs=220.7
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLYLV 667 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~lyLV 667 (1003)
+|++.+.||+|+||.||+|.+..+++.|++|++...... ....+.+.+|+.++++++||||+++++.+... ..+|++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 488999999999999999999989999999998765432 45568889999999999999999999999988 899999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||+++++|.+++.+...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 156 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET--- 156 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc---
Confidence 99999999999998888999999999999999999999999999999999999999999999999999874211000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC-hh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH-PQ 826 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~-~~ 826 (1003)
........++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ..
T Consensus 157 --------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 210 (260)
T cd06606 157 --------------------------GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM 210 (260)
T ss_pred --------------------------cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH
Confidence 001234578899999999998889999999999999999999999998765 22
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.....+.. ....+.++..++..+.+||.+||+.||.+|| ++.++++||||
T Consensus 211 ~~~~~~~~-~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp---~~~~ll~~~~~ 260 (260)
T cd06606 211 AALYKIGS-SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRP---TADELLQHPFL 260 (260)
T ss_pred HHHHhccc-cCCCcCCCcccCHHHHHHHHHhCcCChhhCC---CHHHHhhCCCC
Confidence 22223222 2234556778899999999999999999999 99999999997
No 207
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-40 Score=380.89 Aligned_cols=260 Identities=34% Similarity=0.583 Sum_probs=237.3
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
.......|.+.++||+|.|++|.+|++..++..||||++.+........ ..+.+|+++|+.++|||||++|.+......
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~-~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKR-QKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHH-HHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 3445677999999999999999999999999999999999987655443 448999999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+|+||||+.||.+++++.+++...+..++.++.|++.|++|||+++|||||||.+||||+.+.++||+|||++.+...
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-- 207 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY-- 207 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999975211
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC-CccceeechhHHHHHHHhCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.....++||++.|.|||++.+..| ++.+|+||||+++|-|+.|..||.+
T Consensus 208 ------------------------------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG 257 (596)
T KOG0586|consen 208 ------------------------------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG 257 (596)
T ss_pred ------------------------------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC
Confidence 123457899999999999999887 7899999999999999999999999
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.+..++..+.+.+++.. |..++.+++++|+++|..+|.+|+ +.+++.+|.|...
T Consensus 258 ~~lk~Lr~rvl~gk~rI---p~~ms~dce~lLrk~lvl~Pskr~---~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 258 QNLKELRPRVLRGKYRI---PFYMSCDCEDLLRKFLVLNPSKRG---PCDQIMKDRWRND 311 (596)
T ss_pred cccccccchheeeeecc---cceeechhHHHHHHhhccCccccC---CHHHhhhhcccch
Confidence 99999988888888754 467899999999999999999999 9999999999863
No 208
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.8e-39 Score=339.18 Aligned_cols=259 Identities=29% Similarity=0.506 Sum_probs=218.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc--cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD--MIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~--i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~l 664 (1003)
.+|++.+.||+|+||.||+|++..+++.||+|++.... .........+.+|+.+++.++||||+++++.+.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999999999999999875432 12234557888999999999999999999998764 468
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
+++|||++|++|.+++...+.+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++.....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~-- 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI-- 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc--
Confidence 999999999999999988788999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
.. .........|+..|+|||++.+..++.++|+|||||++|+|++|++||....
T Consensus 160 ------~~--------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 213 (264)
T cd06653 160 ------CM--------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE 213 (264)
T ss_pred ------cc--------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC
Confidence 00 0001123568999999999999889999999999999999999999998776
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
......++.... ..+.+|..+++++.++|.+||. +|..|| ++.+++.|||.
T Consensus 214 ~~~~~~~~~~~~-~~~~~p~~~~~~~~~~i~~~l~-~~~~r~---~~~~~~~~~~~ 264 (264)
T cd06653 214 AMAAIFKIATQP-TKPMLPDGVSDACRDFLKQIFV-EEKRRP---TAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHHcCC-CCCCCCcccCHHHHHHHHHHhc-CcccCc---cHHHHhcCCCC
Confidence 655555544332 2245678899999999999999 579999 99999999984
No 209
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.9e-40 Score=378.27 Aligned_cols=253 Identities=24% Similarity=0.315 Sum_probs=204.9
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
...|.+.+.||+|+||.||+|++..+++.||||.... ..+.+|+++|+.++|||||++++++...+..|||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 3469999999999999999999999999999996432 2356899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
||++. ++|..++... +.+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||+++......
T Consensus 239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~--- 314 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW--- 314 (461)
T ss_pred EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc---
Confidence 99995 6899888654 569999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC---
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE--- 823 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~--- 823 (1003)
........+||+.|||||++.+..++.++|||||||+||||++|..|+...
T Consensus 315 --------------------------~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~ 368 (461)
T PHA03211 315 --------------------------STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRG 368 (461)
T ss_pred --------------------------ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcc
Confidence 000112467999999999999999999999999999999999987654321
Q ss_pred -----ChhhHHHhhhccCCC---CCCC----------------------------CCCCCHHHHHHHHhhccCCcCCcCC
Q 001857 824 -----HPQQIFDNILNRKIP---WPRV----------------------------PEEMSPEAHDLIDRFLTEDPHQRLG 867 (1003)
Q Consensus 824 -----~~~ei~qkIl~~~~~---~P~l----------------------------p~~iS~elkDLIrrcL~kDP~kRPg 867 (1003)
...++.+.+...... ++.. ...++.++.+||.+||+.||.+||
T Consensus 369 ~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RP- 447 (461)
T PHA03211 369 DERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRP- 447 (461)
T ss_pred cccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCc-
Confidence 122233332221111 1100 013566899999999999999999
Q ss_pred CCCHHHHHcCCCCCC
Q 001857 868 SGGASEVKQHVFFKD 882 (1003)
Q Consensus 868 ~~TAeELLqHPFFk~ 882 (1003)
++.|+|+||||+.
T Consensus 448 --sa~elL~hp~f~~ 460 (461)
T PHA03211 448 --SAAELLRLPLFQS 460 (461)
T ss_pred --CHHHHhhCcccCC
Confidence 9999999999974
No 210
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=8.9e-40 Score=347.07 Aligned_cols=257 Identities=31% Similarity=0.512 Sum_probs=208.3
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccce----
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCREN---- 663 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~---- 663 (1003)
++|++.+.||.|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.+. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 46999999999999999999999999999999886542 22223356788999999995 6999999999887665
Q ss_pred -EEEEEEeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-CCcEEEeecCCc
Q 001857 664 -LYLVMEYLNGGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLS 736 (1003)
Q Consensus 664 -lyLVmEy~~GGSL~d~L~~~-----g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLA 736 (1003)
+|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999986 898888643 35799999999999999999999999999999999999998 899999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHh
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLT 815 (1003)
+..... ........+++.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 159 ~~~~~~-------------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~ 207 (295)
T cd07837 159 RAFSIP-------------------------------VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR 207 (295)
T ss_pred eecCCC-------------------------------ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHc
Confidence 731100 001122357889999999875 457899999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCC-----C------------CC--------CCCCCCCHHHHHHHHhhccCCcCCcCCCCC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKI-----P------------WP--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGG 870 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~-----~------------~P--------~lp~~iS~elkDLIrrcL~kDP~kRPg~~T 870 (1003)
|.+||.+.+....+..+..... . ++ .....++.++.+||.+||.+||.+|| +
T Consensus 208 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~---~ 284 (295)
T cd07837 208 KQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRI---S 284 (295)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcC---C
Confidence 9999988766555444432100 0 00 01135789999999999999999999 9
Q ss_pred HHHHHcCCCCC
Q 001857 871 ASEVKQHVFFK 881 (1003)
Q Consensus 871 AeELLqHPFFk 881 (1003)
+.+++.||||+
T Consensus 285 ~~eil~~~~~~ 295 (295)
T cd07837 285 AKAALTHPYFD 295 (295)
T ss_pred HHHHhcCCCcC
Confidence 99999999995
No 211
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=9.5e-40 Score=351.49 Aligned_cols=260 Identities=32% Similarity=0.504 Sum_probs=213.5
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~l 664 (1003)
.+++|++.+.||.|+||.||+|.+..+|..||+|++...... ......+.+|+.+++.++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 467899999999999999999999999999999998754322 22223456799999999999999999998765 568
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|+||||+.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~- 161 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP- 161 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc-
Confidence 999999965 898888753 67899999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
........+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+
T Consensus 162 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~ 211 (309)
T cd07845 162 ------------------------------AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPG 211 (309)
T ss_pred ------------------------------cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 000112346888999999876 5579999999999999999999999998
Q ss_pred CChhhHHHhhhccCC-------------------CCCCC--------CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 823 EHPQQIFDNILNRKI-------------------PWPRV--------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~-------------------~~P~l--------p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
.+..+.+..+..... ..+.. ....++++.+||.+||+.||.+|| ++.+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~---t~~~il 288 (309)
T cd07845 212 KSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRA---TAEEAL 288 (309)
T ss_pred CCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCc---CHHHHh
Confidence 888777666654211 00000 023588999999999999999999 999999
Q ss_pred cCCCCCC
Q 001857 876 QHVFFKD 882 (1003)
Q Consensus 876 qHPFFk~ 882 (1003)
.||||+.
T Consensus 289 ~h~~f~~ 295 (309)
T cd07845 289 ESSYFKE 295 (309)
T ss_pred cChhhcc
Confidence 9999974
No 212
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.5e-40 Score=351.20 Aligned_cols=258 Identities=31% Similarity=0.562 Sum_probs=220.2
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.|+.++.||.|+||.||+|.+..++..||+|++..... ....+.+.+|+.+++.++||||+++++.+.....+|+|||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 47788899999999999999998999999999875432 3345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
|++|++|.+++.. +.+++..++.++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~------- 154 (277)
T cd06642 83 YLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT------- 154 (277)
T ss_pred ccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCc-------
Confidence 9999999998865 57899999999999999999999999999999999999999999999999998631000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~ 829 (1003)
........|+..|+|||++.+..++.++|+|||||++|||++|..||.........
T Consensus 155 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 210 (277)
T cd06642 155 ------------------------QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL 210 (277)
T ss_pred ------------------------chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH
Confidence 00112356889999999999988999999999999999999999999876666555
Q ss_pred HhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChh
Q 001857 830 DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD 886 (1003)
Q Consensus 830 qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd 886 (1003)
..+.... .+.++..++.++.+||.+||..+|.+|| ++.++++||||....+.
T Consensus 211 ~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~~~~~ 262 (277)
T cd06642 211 FLIPKNS--PPTLEGQYSKPFKEFVEACLNKDPRFRP---TAKELLKHKFITRYTKK 262 (277)
T ss_pred hhhhcCC--CCCCCcccCHHHHHHHHHHccCCcccCc---CHHHHHHhHHHHHHhhh
Confidence 5443332 2345567889999999999999999999 99999999999865443
No 213
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.6e-39 Score=331.97 Aligned_cols=254 Identities=33% Similarity=0.630 Sum_probs=222.1
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||+|++..+++.||+|.+...... ......+.+|++++..++|||++++++++.+.+.+|++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 589999999999999999999999999999999876432 3456789999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
|+++++|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~------- 152 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV------- 152 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCC-------
Confidence 9999999999988889999999999999999999999999999999999999999999999999998741100
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~ 829 (1003)
........|+..|+|||.+.+..++.++||||||+++|+|++|..||...+.....
T Consensus 153 ------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~ 208 (254)
T cd06627 153 ------------------------SKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL 208 (254)
T ss_pred ------------------------cccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 00012356889999999998888899999999999999999999999876655544
Q ss_pred HhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 830 DNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 830 qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
..+... ..+.++..++..+.++|.+||..+|++|| ++.+++.||||
T Consensus 209 ~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~~l~~~~~ 254 (254)
T cd06627 209 FRIVQD--DHPPLPEGISPELKDFLMQCFQKDPNLRP---TAKQLLKHPWI 254 (254)
T ss_pred HHHhcc--CCCCCCCCCCHHHHHHHHHHHhCChhhCc---CHHHHhcCCCC
Confidence 444332 33456678899999999999999999999 99999999998
No 214
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.9e-39 Score=340.25 Aligned_cols=252 Identities=23% Similarity=0.401 Sum_probs=215.0
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
....+|++.+.||.|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.++||||+++++.+.....+|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 34567999999999999999999999999999999987542 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
++|||+++++|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~- 157 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 157 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccc-
Confidence 999999999999999754 35899999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
. ........+++.|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus 158 -------~----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 208 (263)
T cd05052 158 -------T----------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 208 (263)
T ss_pred -------e----------------------eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 0 000112334678999999999999999999999999999998 9999998
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+..+.+..+..... +..+..++.++.++|.+||+.||.+|| ++.++++
T Consensus 209 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~l~~ 257 (263)
T cd05052 209 IDLSQVYELLEKGYR--MERPEGCPPKVYELMRACWQWNPSDRP---SFAEIHQ 257 (263)
T ss_pred CCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHccCCcccCC---CHHHHHH
Confidence 888877777755322 345677899999999999999999999 8887765
No 215
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.7e-39 Score=336.38 Aligned_cols=254 Identities=30% Similarity=0.540 Sum_probs=218.3
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||+|.++.+|..||+|.+...... ....+.+.+|+.+++.++||||+++++.+.....+|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 589999999999999999999999999999998764332 2334677899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCc-EEEeecCCccccccCCCCC
Q 001857 670 YLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH-IKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~-VKLiDFGLAk~~~~~~~dd 746 (1003)
|+++++|.+++.... .+++..+..++.||+.||.|||++||+|+||||+||+++.++. +||+|||.+.... ..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~-~~--- 155 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN-DS--- 155 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhcc-CC---
Confidence 999999999997643 4799999999999999999999999999999999999998864 6999999886310 00
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus 156 ---------------------------~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 208 (257)
T cd08225 156 ---------------------------MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH 208 (257)
T ss_pred ---------------------------cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 00112346899999999998888999999999999999999999999988777
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+....+..... +..+..++.++.++|.+||..+|.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp---t~~~ll~~~~~ 257 (257)
T cd08225 209 QLVLKICQGYF--APISPNFSRDLRSLISQLFKVSPRDRP---SITSILKRPFL 257 (257)
T ss_pred HHHHHHhcccC--CCCCCCCCHHHHHHHHHHhccChhhCc---CHHHHhhCCCC
Confidence 77666655432 344567889999999999999999999 99999999997
No 216
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.5e-39 Score=343.48 Aligned_cols=255 Identities=22% Similarity=0.346 Sum_probs=212.2
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~-----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~ 661 (1003)
..++|++.+.||+|+||.||+|.++. ++..||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 44679999999999999999998742 45689999986532 223345688999999999999999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEe
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNLG----------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLT 731 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~g----------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLi 731 (1003)
...|+||||+++|+|.+++.... .++...+..++.|++.||.|||+.|++||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 99999999999999999997532 25677888999999999999999999999999999999999999999
Q ss_pred ecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHH
Q 001857 732 DFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILF 811 (1003)
Q Consensus 732 DFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILY 811 (1003)
|||+++....... ........+++.|||||++.+..++.++|||||||++|
T Consensus 162 dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 212 (277)
T cd05062 162 DFGMTRDIYETDY-----------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 212 (277)
T ss_pred CCCCccccCCcce-----------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHH
Confidence 9999873110000 00011235678899999999988999999999999999
Q ss_pred HHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 812 ELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 812 ELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
||++ |..||.+.+.......+..... +..+..++..+.+||.+||+.||.+|| ++.+++++
T Consensus 213 el~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~e~l~~ 274 (277)
T cd05062 213 EIATLAEQPYQGMSNEQVLRFVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRP---SFLEIISS 274 (277)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 9998 7999998888777776665443 345667899999999999999999999 89998865
No 217
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6e-40 Score=353.32 Aligned_cols=256 Identities=32% Similarity=0.563 Sum_probs=218.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
..|.....||.|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++..++||||+++++.+...+..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 345566689999999999999998999999999865432 23456788999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||+++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~------ 170 (297)
T cd06659 98 EFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD------ 170 (297)
T ss_pred ecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc------
Confidence 99999999998765 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.......+|++.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 171 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 225 (297)
T cd06659 171 -------------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 225 (297)
T ss_pred -------------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0112346799999999999988899999999999999999999999988777666
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
...+..........+..++..+.++|++||+.+|.+|| ++.++++||||..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rp---s~~~ll~~~~~~~ 276 (297)
T cd06659 226 MKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERA---TAQELLDHPFLLQ 276 (297)
T ss_pred HHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCc---CHHHHhhChhhcc
Confidence 66655443333334456889999999999999999999 9999999999974
No 218
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.5e-39 Score=342.47 Aligned_cols=253 Identities=32% Similarity=0.581 Sum_probs=219.7
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|++++.||.|+||.||+|.+..++..||||++..... ......+.+|+.++..++||||+++++.+.....+|+||||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 8889999999999999999988999999999865432 33456788999999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCC
Q 001857 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGP 750 (1003)
Q Consensus 671 ~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p 750 (1003)
+++++|..++.+ +.+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~-------- 154 (277)
T cd06641 84 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-------- 154 (277)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc--------
Confidence 999999999875 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHH
Q 001857 751 AVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFD 830 (1003)
Q Consensus 751 ~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~q 830 (1003)
........|+..|+|||.+.+..++.++|+|||||++|+|++|..||..........
T Consensus 155 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~ 211 (277)
T cd06641 155 -----------------------QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLF 211 (277)
T ss_pred -----------------------hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHH
Confidence 001123568899999999988888999999999999999999999998877766666
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 831 kIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.+.... .+.++..++.++.++|.+||..+|.+|| ++.++++||||..
T Consensus 212 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~l~~~~~~~ 258 (277)
T cd06641 212 LIPKNN--PPTLEGNYSKPLKEFVEACLNKEPSFRP---TAKELLKHKFIVR 258 (277)
T ss_pred HHhcCC--CCCCCcccCHHHHHHHHHHccCChhhCc---CHHHHHhCHHHhh
Confidence 654433 3445667899999999999999999999 9999999999975
No 219
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.5e-39 Score=349.11 Aligned_cols=260 Identities=34% Similarity=0.567 Sum_probs=218.3
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
...++|++++.||.|+||.||++.+..++..||+|.+.... ....+.+.+|+.+++.++||||+++++.+...+..|
T Consensus 16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~ 92 (293)
T cd06647 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELW 92 (293)
T ss_pred CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEE
Confidence 33478999999999999999999998899999999986432 233467889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
+|+||+++++|.+++.+ ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~--- 168 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--- 168 (293)
T ss_pred EEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc---
Confidence 99999999999999876 45889999999999999999999999999999999999999999999999987631000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
........|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.
T Consensus 169 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~ 220 (293)
T cd06647 169 ----------------------------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220 (293)
T ss_pred ----------------------------ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 0112235689999999999988899999999999999999999999987665
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
......+.....+....+..++..+.+||++||..+|.+|| ++.+++.|+||+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~h~~~~~~ 275 (293)
T cd06647 221 LRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG---SAKELLQHPFLKIA 275 (293)
T ss_pred hhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCHHHhcC
Confidence 44433333222211123445788999999999999999999 99999999999754
No 220
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.1e-39 Score=347.35 Aligned_cols=257 Identities=30% Similarity=0.512 Sum_probs=212.1
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLY 665 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~ly 665 (1003)
+++|++.+.||.|+||.||+|.+..+++.||+|.++..... ......+.+|+.++..++||||+++++++... ..+|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 46899999999999999999999999999999999765432 22334567899999999999999999998877 8899
Q ss_pred EEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 666 LVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
+||||+.+ +|.+++... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.+||+|||+++.....
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~-- 159 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP-- 159 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC--
Confidence 99999975 999988764 45999999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC-CCccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-HGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~-ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
........+++.|+|||++.+.. ++.++|||||||++|+|++|.+||...
T Consensus 160 -----------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 160 -----------------------------LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred -----------------------------ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 00112346788999999987644 689999999999999999999999887
Q ss_pred ChhhHHHhhhccCC-------------------CC---------CCCCCC-CCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 824 HPQQIFDNILNRKI-------------------PW---------PRVPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~-------------------~~---------P~lp~~-iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
.....+.++..... .+ ..++.. +++.+.+||++||+.+|++|| ++.|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---t~~el 287 (293)
T cd07843 211 SEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRI---SAEDA 287 (293)
T ss_pred ChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccC---CHHHH
Confidence 76665554432110 00 011222 588999999999999999999 99999
Q ss_pred HcCCCC
Q 001857 875 KQHVFF 880 (1003)
Q Consensus 875 LqHPFF 880 (1003)
++||||
T Consensus 288 l~~~~f 293 (293)
T cd07843 288 LKHPYF 293 (293)
T ss_pred hcCCCC
Confidence 999998
No 221
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.7e-39 Score=342.51 Aligned_cols=254 Identities=30% Similarity=0.542 Sum_probs=211.3
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++++.||.|+||.||+|++..+|..||+|+++.... ......+.+|+.+++.++||||+++++.+.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 58999999999999999999999999999999876532 2233567789999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 670 YLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 670 y~~GGSL~d~L~~~---g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|+++ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||+++.....
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~---- 153 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP---- 153 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC----
Confidence 9985 898888654 35899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
........+|+.|++||++.+. .++.++|||||||++|+|++|++||.+.+.
T Consensus 154 ---------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 206 (284)
T cd07836 154 ---------------------------VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN 206 (284)
T ss_pred ---------------------------ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 0011234678999999998764 568999999999999999999999988776
Q ss_pred hhHHHhhhccCC------------------CCCC--------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 826 QQIFDNILNRKI------------------PWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 826 ~ei~qkIl~~~~------------------~~P~--------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
.+.+..+..... .++. +...++..+.++|.+||+.||.+|| ++.++++|||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~~l~~~~ 283 (284)
T cd07836 207 EDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRI---SAHDALQHPW 283 (284)
T ss_pred HHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCC---CHHHHhcCCC
Confidence 665555432110 0010 1124678899999999999999999 9999999999
Q ss_pred C
Q 001857 880 F 880 (1003)
Q Consensus 880 F 880 (1003)
|
T Consensus 284 f 284 (284)
T cd07836 284 F 284 (284)
T ss_pred C
Confidence 8
No 222
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.1e-40 Score=365.83 Aligned_cols=259 Identities=25% Similarity=0.351 Sum_probs=209.8
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEE-----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKK-----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArd-----k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~ 657 (1003)
+....++|++.+.||+|+||.||+|++ ..++..||+|+++.... ....+.+.+|+.+|..+ +||||++++++
T Consensus 30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~ 107 (375)
T cd05104 30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGA 107 (375)
T ss_pred cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence 344556899999999999999999974 34677899999875432 23446788999999999 89999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhcC-----------------------------------------------------
Q 001857 658 FTCRENLYLVMEYLNGGDLYSLLRNLG----------------------------------------------------- 684 (1003)
Q Consensus 658 f~d~~~lyLVmEy~~GGSL~d~L~~~g----------------------------------------------------- 684 (1003)
+......|+|||||+||+|.+++....
T Consensus 108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 999999999999999999999986421
Q ss_pred ----------------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 685 ----------------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 685 ----------------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 3678888999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~ 821 (1003)
. .........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 268 ~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~ 318 (375)
T cd05104 268 S-----------------------------NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP 318 (375)
T ss_pred c-----------------------------cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 0 0001122345678999999999999999999999999999997 899998
Q ss_pred CCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.......+.+++..... +..+...+.++.+||.+||+.||.+|| ++.+|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~eil~~ 370 (375)
T cd05104 319 GMPVDSKFYKMIKEGYR-MLSPECAPSEMYDIMKSCWDADPLKRP---TFKQIVQL 370 (375)
T ss_pred CCCchHHHHHHHHhCcc-CCCCCCCCHHHHHHHHHHccCChhHCc---CHHHHHHH
Confidence 76544433344433322 223456788999999999999999999 89888764
No 223
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2e-39 Score=345.39 Aligned_cols=264 Identities=29% Similarity=0.461 Sum_probs=208.3
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc--
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-- 662 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~-- 662 (1003)
...+++|++++.||+|+||.||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (310)
T cd07865 8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATP 86 (310)
T ss_pred cchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence 3456789999999999999999999999999999999865432 1222345668999999999999999999887643
Q ss_pred ------eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCC
Q 001857 663 ------NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 663 ------~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
..|+||||+.+ +|.+++... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 87 YNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 46999999965 888888654 3689999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHH
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELI 814 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELL 814 (1003)
+......... .........++..|+|||++.+. .++.++||||||+++|+|+
T Consensus 166 ~~~~~~~~~~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~ 218 (310)
T cd07865 166 ARAFSLSKNS---------------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMW 218 (310)
T ss_pred cccccCCccc---------------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHH
Confidence 8742110000 00111235688999999998764 4688999999999999999
Q ss_pred hCCCCCCCCChhhHHHhhhccCCC-------------------CCCC----------CCCCCHHHHHHHHhhccCCcCCc
Q 001857 815 VGIPPFNAEHPQQIFDNILNRKIP-------------------WPRV----------PEEMSPEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 815 TGk~PF~~~~~~ei~qkIl~~~~~-------------------~P~l----------p~~iS~elkDLIrrcL~kDP~kR 865 (1003)
+|.+||.+.+.......+...... ++.. +...+..+.+||.+||..||.+|
T Consensus 219 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R 298 (310)
T cd07865 219 TRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKR 298 (310)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhc
Confidence 999999887665443332221100 0000 01235678899999999999999
Q ss_pred CCCCCHHHHHcCCCC
Q 001857 866 LGSGGASEVKQHVFF 880 (1003)
Q Consensus 866 Pg~~TAeELLqHPFF 880 (1003)
| +++++++||||
T Consensus 299 ~---t~~e~l~h~~f 310 (310)
T cd07865 299 I---DADTALNHDFF 310 (310)
T ss_pred c---CHHHHhcCCCC
Confidence 9 99999999998
No 224
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.9e-39 Score=339.47 Aligned_cols=255 Identities=24% Similarity=0.362 Sum_probs=214.5
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~t-----gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d 660 (1003)
...++|++.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.++..++||||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 3457899999999999999999998643 4789999986542 22344678899999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEE
Q 001857 661 RENLYLVMEYLNGGDLYSLLRNL----------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKL 730 (1003)
Q Consensus 661 ~~~lyLVmEy~~GGSL~d~L~~~----------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKL 730 (1003)
....|+||||+++|+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||
T Consensus 81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence 99999999999999999999653 23678889999999999999999999999999999999999999999
Q ss_pred eecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHH
Q 001857 731 TDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIIL 810 (1003)
Q Consensus 731 iDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVIL 810 (1003)
+|||+++..... + .........+|..|+|||++.+..++.++|||||||++
T Consensus 161 ~dfg~~~~~~~~--~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 211 (277)
T cd05032 161 GDFGMTRDIYET--D---------------------------YYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL 211 (277)
T ss_pred CCcccchhhccC--c---------------------------ccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHH
Confidence 999998731100 0 00111234578899999999988899999999999999
Q ss_pred HHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 811 FELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 811 YELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
|||++ |.+||.+.+..+..+.+.... .+..+..++.++.+||.+||+.+|.+|| ++.++++
T Consensus 212 ~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~l~~ 273 (277)
T cd05032 212 WEMATLAEQPYQGLSNEEVLKFVIDGG--HLDLPENCPDKLLELMRMCWQYNPKMRP---TFLEIVS 273 (277)
T ss_pred HHhhccCCCCCccCCHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCC---CHHHHHH
Confidence 99998 999999888888777776432 2445677899999999999999999999 8888875
No 225
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.4e-39 Score=346.63 Aligned_cols=260 Identities=32% Similarity=0.533 Sum_probs=211.4
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+++|++.+.||.|+||.||+|.++.+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+..++|+|
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 4689999999999999999999999999999999865432 223345678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-CCcEEEeecCCccccccCCC
Q 001857 668 MEYLNGGDLYSLLRNLGC--LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~--L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|||++ ++|.+++..... +++..++.++.||+.||+|||++||+||||||+||+++. ++.+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~-- 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-- 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC--
Confidence 99996 588888865433 578889999999999999999999999999999999985 567999999998631000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
........|++.|+|||++.+. .++.++|||||||++|+|++|.+||...
T Consensus 157 -----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 157 -----------------------------VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred -----------------------------ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 0011234678999999998764 5789999999999999999999999877
Q ss_pred ChhhHHHhhhccCC-C-----------------CCC--------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 824 HPQQIFDNILNRKI-P-----------------WPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~-~-----------------~P~--------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
...+.+.++..... + .+. ....+++++.++|.+||+.+|.+|| ++.++++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---s~~~~l~~ 284 (294)
T PLN00009 208 SEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI---TARAALEH 284 (294)
T ss_pred CHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc---CHHHHhcC
Confidence 65554444332100 0 000 1235788999999999999999999 99999999
Q ss_pred CCCCCC
Q 001857 878 VFFKDI 883 (1003)
Q Consensus 878 PFFk~I 883 (1003)
|||.++
T Consensus 285 ~~~~~~ 290 (294)
T PLN00009 285 EYFKDL 290 (294)
T ss_pred chHhHH
Confidence 999864
No 226
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.4e-40 Score=353.56 Aligned_cols=257 Identities=32% Similarity=0.539 Sum_probs=217.6
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.++||||+++++.+...+..|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 45666788999999999999999999999999986532 334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
||+++++|.+++.. +.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 99 e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------ 171 (292)
T cd06658 99 EFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE------ 171 (292)
T ss_pred eCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc------
Confidence 99999999998854 56899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
........||+.|+|||++.+..++.++|+|||||++|||++|+.||...+....
T Consensus 172 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~ 226 (292)
T cd06658 172 -------------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 226 (292)
T ss_pred -------------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0111235789999999999988899999999999999999999999988777666
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
+..+.............++..+.+||.+||..||.+|| +++++++||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~il~~~~~~~~ 278 (292)
T cd06658 227 MRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRA---TAQELLQHPFLKLA 278 (292)
T ss_pred HHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCc---CHHHHhhChhhhcc
Confidence 55554332222222335788999999999999999999 99999999999843
No 227
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=6.6e-39 Score=326.83 Aligned_cols=250 Identities=35% Similarity=0.609 Sum_probs=215.9
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||+|.+..+++.|++|++..... .....+.+|+.+++.++||||+++++.+......|+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 58899999999999999999998999999999876542 355788899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 670 YLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 670 y~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|++|++|.+++... +.+++..+..++.|++.||.|||.+|++|+||+|+||+++.++.++|+|||++......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~------ 151 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT------ 151 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc------
Confidence 99999999999876 67999999999999999999999999999999999999999999999999998731000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.......|+..|+|||++.+..++.++|+||||+++|+|++|..||...+....
T Consensus 152 --------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 205 (253)
T cd05122 152 --------------------------KARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA 205 (253)
T ss_pred --------------------------ccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 002345788999999999988899999999999999999999999987755554
Q ss_pred HHhhhccCCCCCCCCCC--CCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 829 FDNILNRKIPWPRVPEE--MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~--iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
...+.... .+..+.. ++..+.++|.+||+.||.+|| ++.++++|||
T Consensus 206 ~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---t~~~~l~~~~ 253 (253)
T cd05122 206 LFKIATNG--PPGLRNPEKWSDEFKDFLKKCLQKNPEKRP---TAEQLLKHPF 253 (253)
T ss_pred HHHHHhcC--CCCcCcccccCHHHHHHHHHHccCChhhCC---CHHHHhcCCC
Confidence 44443322 2233333 489999999999999999999 9999999998
No 228
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.8e-39 Score=343.05 Aligned_cols=262 Identities=35% Similarity=0.591 Sum_probs=224.8
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
..+.|++.+.||.|+||.||+|.+..++..||+|++..... ....+.+|+.+++.++|+||+++++.+......|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 34569999999999999999999988899999999876432 45678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|+||++|++|.+++...+ .++...+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~---- 168 (286)
T cd06614 93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK---- 168 (286)
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc----
Confidence 999999999999998876 899999999999999999999999999999999999999999999999998763100
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.........|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.
T Consensus 169 ---------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~ 221 (286)
T cd06614 169 ---------------------------EKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP 221 (286)
T ss_pred ---------------------------chhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH
Confidence 00011234688999999999988899999999999999999999999988777
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChh
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWD 886 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd 886 (1003)
......+.....+....+..++..+.+||.+||+.+|.+|| ++.++++|+||+...|.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~~~~~ 279 (286)
T cd06614 222 LRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRP---SAEELLQHPFLKKACPK 279 (286)
T ss_pred HHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCc---CHHHHhhChHhhccCch
Confidence 66655555443322122334889999999999999999999 99999999999986665
No 229
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.5e-39 Score=337.48 Aligned_cols=249 Identities=25% Similarity=0.427 Sum_probs=211.4
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++.+.||+|+||.||+|+++ .+..+|+|.+..... ....+.+|+.+++.++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence 467999999999999999999885 456799998865432 235678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||++||+|.+++... +.+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..... .
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~--~- 154 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD--E- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCC--c-
Confidence 9999999999999753 56899999999999999999999999999999999999999999999999998731000 0
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~ 825 (1003)
........++..|+|||++.+..++.++||||||+++|+|++ |++||...+.
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~ 207 (256)
T cd05114 155 ---------------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN 207 (256)
T ss_pred ---------------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 000112345678999999998889999999999999999999 9999998888
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+....+..... +..+...+..+.+||.+||+.+|.+|| ++.++++
T Consensus 208 ~~~~~~i~~~~~--~~~~~~~~~~~~~li~~c~~~~p~~Rp---s~~~l~~ 253 (256)
T cd05114 208 YEVVEMISRGFR--LYRPKLASMTVYEVMYSCWHEKPEGRP---TFAELLR 253 (256)
T ss_pred HHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 888888766543 233556788999999999999999999 8988875
No 230
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.6e-39 Score=342.13 Aligned_cols=256 Identities=31% Similarity=0.583 Sum_probs=216.2
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeeccceEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR---NPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~---HPNIVkL~~~f~d~~~lyL 666 (1003)
.|++++.||.|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++ ||||+++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4888999999999999999999999999999987542 2334567888999999986 9999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
||||++|++|.+++.. +.+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~---- 154 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN---- 154 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC----
Confidence 9999999999999866 47999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
........|++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.....
T Consensus 155 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~ 207 (277)
T cd06917 155 ---------------------------SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA 207 (277)
T ss_pred ---------------------------ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 011223578999999999875 4578999999999999999999999987766
Q ss_pred hhHHHhhhccCCCCCCCCC-CCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPE-EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~-~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
......+... ..+.++. .++.++.+||.+||..||.+|| ++.++++|+||++..
T Consensus 208 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---~~~~il~~~~~~~~~ 262 (277)
T cd06917 208 FRAMMLIPKS--KPPRLEDNGYSKLLREFVAACLDEEPKERL---SAEELLKSKWIKAHS 262 (277)
T ss_pred hhhhhccccC--CCCCCCcccCCHHHHHHHHHHcCCCcccCc---CHHHHhhChHhhccc
Confidence 5554443332 2233333 3789999999999999999999 999999999998654
No 231
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.2e-39 Score=342.32 Aligned_cols=259 Identities=31% Similarity=0.506 Sum_probs=213.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLYL 666 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~lyL 666 (1003)
++|+..+.||.|+||.||+|.+..+++.||+|++..... ......+.+|+++++.++||||+++++.|.+. ..+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 469999999999999999999999999999999875432 24457788999999999999999999988654 47899
Q ss_pred EEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 667 VMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
||||++|++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~- 157 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN- 157 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc-
Confidence 9999999999988753 34689999999999999999999999999999999999999999999999999863100
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.......++..|+|||.+.+..++.++|||||||++|+|++|..||..
T Consensus 158 --------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 205 (287)
T cd06621 158 --------------------------------SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPP 205 (287)
T ss_pred --------------------------------cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 001134578899999999998999999999999999999999999976
Q ss_pred C-----ChhhHHHhhhccCCC-CCCCC---CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCCh
Q 001857 823 E-----HPQQIFDNILNRKIP-WPRVP---EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINW 885 (1003)
Q Consensus 823 ~-----~~~ei~qkIl~~~~~-~P~lp---~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idw 885 (1003)
. ...+....+.....+ ++..+ ..+++.+.+||.+||.++|.+|| ++.|+++||||++..-
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~eil~~~~~~~~~~ 274 (287)
T cd06621 206 EGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRP---TPWDMLEHPWIKAQMK 274 (287)
T ss_pred ccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCC---CHHHHHhCcccccccc
Confidence 5 223444444332211 11111 23567899999999999999999 9999999999986543
No 232
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-39 Score=398.62 Aligned_cols=262 Identities=30% Similarity=0.525 Sum_probs=216.0
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--cce
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--REN 663 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d--~~~ 663 (1003)
..+++|++++.||+|+||+||+|+++.++..||+|++..... .......+..|+.+|..++|||||+++++|.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 345789999999999999999999999999999999876543 33445778899999999999999999998865 457
Q ss_pred EEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhc-------CceeccCCCcceeecC--------
Q 001857 664 LYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSL-------RVVHRDLKPDNLLIAH-------- 724 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~----g~L~Ee~ar~Ia~QIL~ALeYLHs~-------GIIHRDIKPeNILLd~-------- 724 (1003)
+||||||+++|+|.++|... +.+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 99999999999999998652 5799999999999999999999984 4999999999999964
Q ss_pred ---------CCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-
Q 001857 725 ---------DGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG- 794 (1003)
Q Consensus 725 ---------dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g- 794 (1003)
.+.+||+|||+++.... .......+||+.|+|||++.+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~--------------------------------~s~~~s~vGTp~YmAPEvL~ge 216 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGI--------------------------------ESMAHSCVGTPYYWSPELLLHE 216 (1021)
T ss_pred cccccccCCCCceEEccCCccccccc--------------------------------cccccccCCCccccCHHHHhcc
Confidence 24589999999873100 001124579999999999965
Q ss_pred -CCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHH
Q 001857 795 -TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1003)
Q Consensus 795 -~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeE 873 (1003)
..++.++||||||||||||++|..||........+...+.....++ ....+.++.+||..||..+|.+|| ++.+
T Consensus 217 ~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp--i~~~S~eL~dLI~~~L~~dPeeRP---Sa~Q 291 (1021)
T PTZ00266 217 TKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP--IKGKSKELNILIKNLLNLSAKERP---SALQ 291 (1021)
T ss_pred CCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC--cCCCCHHHHHHHHHHhcCChhHCc---CHHH
Confidence 4588999999999999999999999976554443333333332222 245789999999999999999999 9999
Q ss_pred HHcCCCCCCCCh
Q 001857 874 VKQHVFFKDINW 885 (1003)
Q Consensus 874 LLqHPFFk~Idw 885 (1003)
+|.|+||+.+..
T Consensus 292 lL~h~~ik~i~~ 303 (1021)
T PTZ00266 292 CLGYQIIKNVGP 303 (1021)
T ss_pred HhccHHHhhcCC
Confidence 999999987643
No 233
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.8e-39 Score=347.05 Aligned_cols=254 Identities=28% Similarity=0.438 Sum_probs=215.8
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+.|++.+.||+|+||+||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56999999999999999999999999999999987654444555677899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+.| +|.+++.. .+.+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~------- 166 (307)
T cd06607 95 EYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS------- 166 (307)
T ss_pred HhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC-------
Confidence 99974 77777654 4679999999999999999999999999999999999999999999999999986310
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
......|++.|+|||++. ...++.++||||||+++|||++|.+||...+
T Consensus 167 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~ 218 (307)
T cd06607 167 ----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (307)
T ss_pred ----------------------------CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence 012356888999999985 3557889999999999999999999998877
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.......+.....+ ...+..++..+.+||.+||..+|.+|| ++.+++.||||..
T Consensus 219 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~~~ 272 (307)
T cd06607 219 AMSALYHIAQNDSP-TLSSNDWSDYFRNFVDSCLQKIPQDRP---SSEELLKHRFVLR 272 (307)
T ss_pred HHHHHHHHhcCCCC-CCCchhhCHHHHHHHHHHhcCChhhCc---CHHHHhcChhhcc
Confidence 66555444433221 112345788999999999999999999 9999999999975
No 234
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.6e-39 Score=339.81 Aligned_cols=254 Identities=30% Similarity=0.510 Sum_probs=213.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+++|++.+.||.|+||.||+|++..+++.||||.+.+...........+.+|+.+++.++||||+++++.+...+.+|++
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 36799999999999999999999999999999998776555555667889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|||++|++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~- 159 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK- 159 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC-
Confidence 999999999999864 346899999999999999999999999999999999999999999999999998631100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||.+.
T Consensus 160 ------------------------------~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08229 160 ------------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred ------------------------------CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 00112356899999999999988999999999999999999999999765
Q ss_pred Ch--hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 824 HP--QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 824 ~~--~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.. ......+.....+ +..+..++..+.+||.+||..||.+|| |+.+|++
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~i~~ 260 (267)
T cd08229 210 KMNLYSLCKKIEQCDYP-PLPSDHYSEELRQLVNMCINPDPEKRP---DITYVYD 260 (267)
T ss_pred cchHHHHhhhhhcCCCC-CCCcccccHHHHHHHHHhcCCCcccCC---CHHHHHH
Confidence 43 3344444332221 122346889999999999999999999 8886653
No 235
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.6e-39 Score=334.27 Aligned_cols=252 Identities=31% Similarity=0.538 Sum_probs=213.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
++|++.+.||.|+||.||+|.+..+|+.||+|.++..........+.+.+|+.+++.++|+||+++++.+...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 67999999999999999999999899999999987655555555678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 669 EYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~----g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||++||+|..++... ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 159 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-- 159 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC--
Confidence 999999999998642 45899999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||....
T Consensus 160 -----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08224 160 -----------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred -----------------------------CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence 001123568899999999999889999999999999999999999996543
Q ss_pred --hhhHHHhhhccCCCCCCCCC-CCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 825 --PQQIFDNILNRKIPWPRVPE-EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 825 --~~ei~qkIl~~~~~~P~lp~-~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.......+.... ++..+. .++..+.++|.+||..+|.+|| ++.+|++
T Consensus 211 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp---~~~~il~ 260 (267)
T cd08224 211 MNLYSLCKKIEKCD--YPPLPADHYSEELRDLVSRCINPDPEKRP---DISYVLQ 260 (267)
T ss_pred ccHHHHHhhhhcCC--CCCCChhhcCHHHHHHHHHHcCCCcccCC---CHHHHHH
Confidence 334444444332 233333 6888999999999999999999 8887764
No 236
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.6e-39 Score=344.72 Aligned_cols=251 Identities=27% Similarity=0.463 Sum_probs=213.0
Q ss_pred CCeEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk-----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
++|.+.+.||+|+||+||++... .++..||+|.+.... ......+.+|+.++..++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 57999999999999999999853 345679999886542 3445678899999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEE
Q 001857 664 LYLVMEYLNGGDLYSLLRNLG-------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKL 730 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g-------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKL 730 (1003)
+|+||||+++++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence 999999999999999997543 3899999999999999999999999999999999999999999999
Q ss_pred eecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHH
Q 001857 731 TDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIIL 810 (1003)
Q Consensus 731 iDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVIL 810 (1003)
+|||+++...... .........+++.|+|||++.+..++.++|||||||++
T Consensus 162 ~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il 212 (288)
T cd05093 162 GDFGMSRDVYSTD-----------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 212 (288)
T ss_pred ccCCccccccCCc-----------------------------eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 9999987311000 00011234567889999999999899999999999999
Q ss_pred HHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 811 FELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 811 YELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
|+|++ |.+||......+....+..... +..+..++.++.+||.+||+.||.+|| ++.++++
T Consensus 213 ~~l~t~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~v~~ 274 (288)
T cd05093 213 WEIFTYGKQPWYQLSNNEVIECITQGRV--LQRPRTCPKEVYDLMLGCWQREPHMRL---NIKEIHS 274 (288)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 99998 9999998888888888776543 334567899999999999999999999 8888754
No 237
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.2e-39 Score=344.67 Aligned_cols=256 Identities=28% Similarity=0.494 Sum_probs=204.3
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++++.||+|+||.||+|.+..+|..||+|++..... ......+.+|+.+++.++|+||+++++++......|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3679999999999999999999999999999999865432 12223567899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||+. ++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 156 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP---- 156 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC----
Confidence 99996 677777654 356888999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.
T Consensus 157 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~ 209 (291)
T cd07870 157 ---------------------------SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD 209 (291)
T ss_pred ---------------------------CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh
Confidence 001123467899999999876 4578899999999999999999999976543
Q ss_pred h-hHHHhhhcc-CC----------CCCC----------------CC--CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 826 Q-QIFDNILNR-KI----------PWPR----------------VP--EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 826 ~-ei~qkIl~~-~~----------~~P~----------------lp--~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
. +.+..+... .. ..+. .. ...+.++.+||.+||..||.+|| |+.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~---t~~~~l 286 (291)
T cd07870 210 VFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRI---SAQDAL 286 (291)
T ss_pred HHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCc---CHHHHh
Confidence 1 222221110 00 0000 00 01357899999999999999999 999999
Q ss_pred cCCCC
Q 001857 876 QHVFF 880 (1003)
Q Consensus 876 qHPFF 880 (1003)
.||||
T Consensus 287 ~h~~~ 291 (291)
T cd07870 287 LHPYF 291 (291)
T ss_pred cCCCC
Confidence 99998
No 238
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-42 Score=367.02 Aligned_cols=256 Identities=32% Similarity=0.590 Sum_probs=227.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+-|.++.+||+|+||.||+|.++.+|..+|||.+... ..++.+..|+.||+++++|+||++|+.|.....++|||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM 107 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM 107 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence 3489999999999999999999999999999987653 34678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||..|++.++++. +.+++++++..+++.-+.||+|||...-||||||..|||++.+|+.||+|||.|-.
T Consensus 108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQ--------- 178 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQ--------- 178 (502)
T ss_pred hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccch---------
Confidence 99999999999974 47899999999999999999999999999999999999999999999999998752
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
+ ...--+.++.+|||.|||||++..-+|+.++||||||++..||..|++||.+..+..
T Consensus 179 -----------------L-----TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR 236 (502)
T KOG0574|consen 179 -----------------L-----TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR 236 (502)
T ss_pred -----------------h-----hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc
Confidence 1 111234578999999999999999999999999999999999999999999988876
Q ss_pred HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
.+-.|-....+--.-|+.+|.++.|||++||.+.|++|- ||.++++|||.++-
T Consensus 237 AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~---TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 237 AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERK---TALRLCEHTFIKNA 289 (502)
T ss_pred eeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHH---HHHHHhhhhhhcCC
Confidence 665655544433344678999999999999999999999 99999999999864
No 239
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.6e-39 Score=331.94 Aligned_cols=247 Identities=30% Similarity=0.453 Sum_probs=214.2
Q ss_pred EEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEec
Q 001857 595 KPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYL 671 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~t---gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~ 671 (1003)
+.||+|+||.||+|.+... +..||+|++....... ..+.+.+|+.++..++|+||+++++++.+...+|+||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999865 8899999997654322 4678889999999999999999999999999999999999
Q ss_pred cCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 672 NGGDLYSLLRNL---------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 672 ~GGSL~d~L~~~---------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999999875 77999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~ 821 (1003)
.. ........+++.|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 159 ~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 209 (262)
T cd00192 159 DY-----------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYP 209 (262)
T ss_pred cc-----------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCC
Confidence 00 011234567899999999998889999999999999999999 699999
Q ss_pred CCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.....++.+.+.... ....+..++.++.++|.+||+.+|.+|| ++.++++|
T Consensus 210 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~l~~~ 260 (262)
T cd00192 210 GLSNEEVLEYLRKGY--RLPKPEYCPDELYELMLSCWQLDPEDRP---TFSELVER 260 (262)
T ss_pred CCCHHHHHHHHHcCC--CCCCCccCChHHHHHHHHHccCCcccCc---CHHHHHHh
Confidence 988888888776532 2345677899999999999999999999 99999876
No 240
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.4e-39 Score=340.31 Aligned_cols=251 Identities=29% Similarity=0.485 Sum_probs=204.7
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecc--ceEEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCR--ENLYLV 667 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~--~~lyLV 667 (1003)
|++++.||+|+||.||+|.+..+++.||+|++++... .... ....+|+.++.++. ||||+++++++.+. +.+|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999876432 1222 23457888888885 99999999999987 889999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||+.+ +|.+.+... +.+++..++.++.||+.||.|||++||+||||||+||+++. +.+||+|||+++.....
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~---- 152 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK---- 152 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC----
Confidence 999975 888888753 57899999999999999999999999999999999999999 99999999998731000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.......+|+.|+|||++.. ..++.++|||||||++|||++|.+||.+.+.
T Consensus 153 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~ 204 (282)
T cd07831 153 ----------------------------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE 204 (282)
T ss_pred ----------------------------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH
Confidence 00112468899999998754 5568999999999999999999999988776
Q ss_pred hhHHHhhhccC------------------CCCCC--------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 826 QQIFDNILNRK------------------IPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 826 ~ei~qkIl~~~------------------~~~P~--------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
.+.+..+.... ..++. +...++.++.+||.+||.++|.+|| ++.++++|||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---~~~~~l~~~~ 281 (282)
T cd07831 205 LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERI---TAKQALRHPY 281 (282)
T ss_pred HHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCccccc---CHHHHhhCCC
Confidence 55544443211 01111 1135689999999999999999999 9999999999
Q ss_pred C
Q 001857 880 F 880 (1003)
Q Consensus 880 F 880 (1003)
|
T Consensus 282 ~ 282 (282)
T cd07831 282 F 282 (282)
T ss_pred C
Confidence 8
No 241
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.6e-39 Score=336.76 Aligned_cols=252 Identities=23% Similarity=0.357 Sum_probs=209.9
Q ss_pred eEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce----
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN---- 663 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~t---gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~---- 663 (1003)
|++.+.||+|+||.||+|....+ +..||+|+++.... .......+.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 67889999999999999997653 47899999875432 34456788999999999999999999988765443
Q ss_pred --EEEEEEeccCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCC
Q 001857 664 --LYLVMEYLNGGDLYSLLRNL------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 664 --lyLVmEy~~GGSL~d~L~~~------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
.+++|||+++|+|..++... ..+++..+..++.||+.||.|||++||+||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 89999999999999998542 3589999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT 815 (1003)
++....... ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~ 210 (273)
T cd05035 160 SKKIYSGDY-----------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210 (273)
T ss_pred eeecccccc-----------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHh
Confidence 874211000 000112345678999999998889999999999999999999
Q ss_pred -CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 816 -GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 816 -Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|.+||.+....++++.+.... .+..+..++.++.++|.+||+.||.+|| ++.+++++
T Consensus 211 ~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~e~~~~ 268 (273)
T cd05035 211 RGQTPYPGVENHEIYDYLRHGN--RLKQPEDCLDELYDLMYSCWRADPKDRP---TFTKLREV 268 (273)
T ss_pred CCCCCCCCCCHHHHHHHHHcCC--CCCCCcCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 999999888888877776543 2345678999999999999999999999 88888765
No 242
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.9e-39 Score=332.05 Aligned_cols=252 Identities=28% Similarity=0.506 Sum_probs=221.2
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+|++.+.||.|+||.||+++++.+++.||+|++.+.... ......+.+|+.+++.++||||+++++.+.+....|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 589999999999999999999999999999998765543 3345677889999999999999999999999999999999
Q ss_pred eccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 670 YLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 670 y~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|+++++|..++.+ ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~---- 155 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKK---- 155 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhcc----
Confidence 9999999999866 35689999999999999999999999999999999999999999999999999874110
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.
T Consensus 156 -----------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~ 206 (256)
T cd08530 156 -----------------------------NMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM 206 (256)
T ss_pred -----------------------------CCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 011234688899999999999899999999999999999999999998887
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
......+.... ++.++..++.++.++|.+||+.+|.+|| ++.++++||+.
T Consensus 207 ~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~~l~~p~~ 256 (256)
T cd08530 207 QDLRYKVQRGK--YPPIPPIYSQDLQNFIRSMLQVKPKLRP---NCDKILASPAV 256 (256)
T ss_pred HHHHHHHhcCC--CCCCchhhCHHHHHHHHHHcCCCcccCC---CHHHHhcCCCC
Confidence 77766665543 3455667899999999999999999999 99999999974
No 243
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.4e-39 Score=343.25 Aligned_cols=263 Identities=27% Similarity=0.470 Sum_probs=211.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyL 666 (1003)
.++|+..+.||+|+||.||++.+..+++.||+|.+.+.... .....+.+|+.++.++. ||||+++++++......|+
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 35678889999999999999999999999999998764322 34567889999999986 9999999999999999999
Q ss_pred EEEeccCCChHHHH---H--hcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 667 VMEYLNGGDLYSLL---R--NLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 667 VmEy~~GGSL~d~L---~--~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
+|||+.+ +|.++. . ..+.+++..+..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9999864 555433 2 23679999999999999999999997 599999999999999999999999999986310
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC---CCCccceeechhHHHHHHHhCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT---GHGTTADWWSVGIILFELIVGI 817 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~---~ys~kSDIWSLGVILYELLTGk 817 (1003)
. ........||+.|+|||++.+. .++.++|||||||++|+|++|+
T Consensus 160 ~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 207 (288)
T cd06616 160 D--------------------------------SIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK 207 (288)
T ss_pred c--------------------------------CCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCC
Confidence 0 0011234689999999999876 6899999999999999999999
Q ss_pred CCCCCCCh-hhHHHhhhccCCC-CC-CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHH
Q 001857 818 PPFNAEHP-QQIFDNILNRKIP-WP-RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTL 888 (1003)
Q Consensus 818 ~PF~~~~~-~ei~qkIl~~~~~-~P-~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L 888 (1003)
+||..... .+...++.....+ ++ ..+..++.++.+||.+||++||.+|| +++++++||||....|.+.
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~i~~~~~~~~~~~~~~ 278 (288)
T cd06616 208 FPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRP---KYKELLEHPFIKDYEERNV 278 (288)
T ss_pred CCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCc---CHHHHhcChhhhchhhcch
Confidence 99976542 1222222222211 11 12235889999999999999999999 9999999999998766544
No 244
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-39 Score=344.61 Aligned_cols=255 Identities=21% Similarity=0.347 Sum_probs=215.1
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~t-----gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~ 661 (1003)
.+.+|++++.||+|+||.||+|.+..+ +..||+|+++... .....+.+.+|..++..++||||+++++.+...
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 80 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE 80 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 346789999999999999999987543 5789999987542 233446788999999999999999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD 725 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~----------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d 725 (1003)
...++++||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 9999999999999999998532 347888899999999999999999999999999999999999
Q ss_pred CcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeec
Q 001857 726 GHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWS 805 (1003)
Q Consensus 726 G~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWS 805 (1003)
+.+||+|||+++..... ..........+++.|+|||++.+..++.++||||
T Consensus 161 ~~~kl~Dfg~~~~~~~~-----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 211 (283)
T cd05091 161 LNVKISDLGLFREVYAA-----------------------------DYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWS 211 (283)
T ss_pred CceEecccccccccccc-----------------------------hheeeccCccCCccccCHHHHhcCCCCcchhHHH
Confidence 99999999998731000 0001122345678999999999888999999999
Q ss_pred hhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 806 VGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 806 LGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|||++|||++ |..||.+....++...+..... +..+..++.++.+|+.+||+.+|.+|| ++.+|++.
T Consensus 212 lG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~RP---~~~~i~~~ 279 (283)
T cd05091 212 YGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQV--LPCPDDCPAWVYTLMLECWNEFPSRRP---RFKDIHSR 279 (283)
T ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHhCCCcccCC---CHHHHHHH
Confidence 9999999998 8999998888888888776553 335678999999999999999999999 89988764
No 245
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.9e-39 Score=341.09 Aligned_cols=257 Identities=25% Similarity=0.408 Sum_probs=214.7
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeee
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSF 658 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~t-----gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f 658 (1003)
....++|++.+.||+|+||.||++.+... ...+|+|++.... .......+.+|+.++..+ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 44557899999999999999999998643 3689999987542 233446788999999999 899999999999
Q ss_pred eccceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceee
Q 001857 659 TCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI 722 (1003)
Q Consensus 659 ~d~~~lyLVmEy~~GGSL~d~L~~~----------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL 722 (1003)
.....+|++|||+++|+|..++... +.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 9999999999999999999999642 458899999999999999999999999999999999999
Q ss_pred cCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccce
Q 001857 723 AHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTAD 802 (1003)
Q Consensus 723 d~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSD 802 (1003)
+.++.+||+|||+++..... . .........++..|+|||++.+..++.++|
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~--~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 216 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHI--D---------------------------YYRKTTNGRLPVKWMAPEALFDRVYTHQSD 216 (293)
T ss_pred cCCCeEEeCccccccccccc--c---------------------------ceeccCCCCCCccccCHHHhccCCcCcccc
Confidence 99999999999998731100 0 000011223567899999999999999999
Q ss_pred eechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 803 WWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 803 IWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
||||||++|||++ |..||......+.++.+..... +..+..++..+.+||.+||..||.+|| ++.+++++
T Consensus 217 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~eil~~ 287 (293)
T cd05053 217 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYR--MEKPQNCTQELYHLMRDCWHEVPSQRP---TFKQLVED 287 (293)
T ss_pred eeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCc---CHHHHHHH
Confidence 9999999999997 9999998888777777655432 345567889999999999999999999 99999875
No 246
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.3e-39 Score=335.35 Aligned_cols=251 Identities=23% Similarity=0.399 Sum_probs=211.0
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
+..++|+++++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.++||||+++++.+...+..|
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 44578999999999999999999974 56789999876532 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
++|||+++++|.+++... ..++...+..++.||+.||+|||+.|++||||||+||+++.++.++|+|||++......
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~- 156 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN- 156 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC-
Confidence 999999999999999753 46888999999999999999999999999999999999999999999999998741000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
. ........++..|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus 157 ----~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 157 ----E-------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred ----c-------------------------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCC
Confidence 0 000112346778999999998889999999999999999998 9999988
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.........+.... .++ ....++.++.+||.+||..+|.+|| +++++.+
T Consensus 208 ~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 256 (261)
T cd05072 208 MSNSDVMSALQRGY-RMP-RMENCPDELYDIMKTCWKEKAEERP---TFDYLQS 256 (261)
T ss_pred CCHHHHHHHHHcCC-CCC-CCCCCCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 87777777765442 233 3356889999999999999999999 7777654
No 247
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.2e-39 Score=332.97 Aligned_cols=247 Identities=51% Similarity=0.962 Sum_probs=219.5
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCCh
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL 676 (1003)
||.|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++.+.....+|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999888999999999887665556678899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcc
Q 001857 677 YSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTT 756 (1003)
Q Consensus 677 ~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~tt 756 (1003)
.+++...+.+++..+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~-------------- 146 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE-------------- 146 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccC--------------
Confidence 999998888999999999999999999999999999999999999999999999999998731100
Q ss_pred cCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccC
Q 001857 757 LLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRK 836 (1003)
Q Consensus 757 l~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~ 836 (1003)
........|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.....+.+....
T Consensus 147 -----------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~ 209 (250)
T cd05123 147 -----------------GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP 209 (250)
T ss_pred -----------------CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC
Confidence 011234578899999999998888999999999999999999999998887777777776644
Q ss_pred CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCH---HHHHcCCCC
Q 001857 837 IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGA---SEVKQHVFF 880 (1003)
Q Consensus 837 ~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TA---eELLqHPFF 880 (1003)
. .++..++..+.+||++||..||.+|| ++ +++++||||
T Consensus 210 ~---~~~~~~~~~l~~~i~~~l~~~p~~R~---~~~~~~~l~~~~~f 250 (250)
T cd05123 210 L---RFPEFLSPEARDLISGLLQKDPTKRL---GSGGAEEIKAHPFF 250 (250)
T ss_pred C---CCCCCCCHHHHHHHHHHhcCCHhhCC---CcccHHHHHhCCCC
Confidence 3 34566799999999999999999999 66 999999998
No 248
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-39 Score=347.38 Aligned_cols=259 Identities=28% Similarity=0.487 Sum_probs=206.4
Q ss_pred CeEEEEEeeccCceEEEEEEECC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRT--TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLY 665 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~--tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~ly 665 (1003)
.|++.+.||+|+||.||+|.+.. ++..||+|++.............+.+|+.++..++||||+++++++.+. ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48999999999999999999988 8999999999874433333446678899999999999999999999988 8899
Q ss_pred EEEEeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC----CCcEEEeecCCc
Q 001857 666 LVMEYLNGGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH----DGHIKLTDFGLS 736 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~-----g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~----dG~VKLiDFGLA 736 (1003)
+||||+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999975 777776432 36899999999999999999999999999999999999999 899999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLT 815 (1003)
+....... ........+||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 160 ~~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~ 211 (316)
T cd07842 160 RLFNAPLK----------------------------PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211 (316)
T ss_pred cccCCCcc----------------------------cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 74211000 00112345789999999998764 57899999999999999999
Q ss_pred CCCCCCCCChhh---------HHHhhhc--------------------------cCCCCCC--------CCCCCCHHHHH
Q 001857 816 GIPPFNAEHPQQ---------IFDNILN--------------------------RKIPWPR--------VPEEMSPEAHD 852 (1003)
Q Consensus 816 Gk~PF~~~~~~e---------i~qkIl~--------------------------~~~~~P~--------lp~~iS~elkD 852 (1003)
|.+||.+..... .+..++. ....++. .....+.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (316)
T cd07842 212 LEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFD 291 (316)
T ss_pred cCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHH
Confidence 999997654322 1111100 0000110 00156788999
Q ss_pred HHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 853 LIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 853 LIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+|.+||+.||.+|| ++.++++||||
T Consensus 292 ~i~~~l~~~P~~Rp---s~~eil~~~~f 316 (316)
T cd07842 292 LLRKLLEYDPTKRI---TAEEALEHPYF 316 (316)
T ss_pred HHHHHhcCCcccCc---CHHHHhcCCCC
Confidence 99999999999999 99999999998
No 249
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.1e-39 Score=340.84 Aligned_cols=254 Identities=22% Similarity=0.358 Sum_probs=212.4
Q ss_pred cCCeEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~-----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 4679999999999999999999977 77899999876432 2333467889999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC---cEEEee
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLG-------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---HIKLTD 732 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g-------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---~VKLiD 732 (1003)
..|+||||++|++|.+++...+ .+++..+..++.||+.||+|||++|++||||||+|||++.++ .+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999999997653 488999999999999999999999999999999999998765 599999
Q ss_pred cCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHH
Q 001857 733 FGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 733 FGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYE 812 (1003)
||+++....... ........+++.|+|||++.+..++.++|||||||++||
T Consensus 163 fg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~e 213 (277)
T cd05036 163 FGMARDIYRASY-----------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWE 213 (277)
T ss_pred CccccccCCccc-----------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHH
Confidence 999874100000 000112234568999999998889999999999999999
Q ss_pred HHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 813 LIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 813 LLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|++ |..||...+...+...+..... +..+..++..+.+||.+||+.+|.+|| ++.++++|
T Consensus 214 l~~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~cl~~~p~~Rp---s~~~vl~~ 274 (277)
T cd05036 214 IFSLGYMPYPGRTNQEVMEFVTGGGR--LDPPKGCPGPVYRIMTDCWQHTPEDRP---NFATILER 274 (277)
T ss_pred HHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHHH
Confidence 997 9999998887777666654322 334567899999999999999999999 99999987
No 250
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.7e-39 Score=341.71 Aligned_cols=255 Identities=26% Similarity=0.388 Sum_probs=212.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCC----------------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTG----------------DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV 651 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tg----------------k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNI 651 (1003)
..+|++++.||+|+||.||+|.+..++ ..||+|++..... ....+.+.+|+.++..++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence 467999999999999999999876544 5689999875432 3456788999999999999999
Q ss_pred EEEEeeeeccceEEEEEEeccCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcce
Q 001857 652 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-----------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1003)
Q Consensus 652 VkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g-----------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1003)
+++++++...+.+|++|||+++++|.+++.+.. .+++..++.++.||+.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999998765 689999999999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001857 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1003)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1003)
+++.++.++|+|||+++..... + .........+|+.|+|||++.+..++.+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~--~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 212 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSS--D---------------------------YYRVQGRAPLPIRWMAWESVLLGKFTTK 212 (296)
T ss_pred eecCCCceEEccccceeecccC--c---------------------------ceeecCcCCCCceecCHHHhhcCCCCcc
Confidence 9999999999999998731100 0 0011224567889999999998889999
Q ss_pred ceeechhHHHHHHHh--CCCCCCCCChhhHHHhhhcc-----CCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHH
Q 001857 801 ADWWSVGIILFELIV--GIPPFNAEHPQQIFDNILNR-----KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1003)
Q Consensus 801 SDIWSLGVILYELLT--Gk~PF~~~~~~ei~qkIl~~-----~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeE 873 (1003)
+|||||||++|||++ |..||......+++..+... .......+..++.++.+||.+||+.||.+|| ++.+
T Consensus 213 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp---t~~e 289 (296)
T cd05051 213 SDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRP---TFRE 289 (296)
T ss_pred chhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCC---CHHH
Confidence 999999999999998 78899877776666655432 1111223456789999999999999999999 8998
Q ss_pred HHc
Q 001857 874 VKQ 876 (1003)
Q Consensus 874 LLq 876 (1003)
|++
T Consensus 290 l~~ 292 (296)
T cd05051 290 IHL 292 (296)
T ss_pred HHH
Confidence 865
No 251
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.2e-39 Score=354.27 Aligned_cols=260 Identities=30% Similarity=0.523 Sum_probs=208.2
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----ce
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-----EN 663 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~-----~~ 663 (1003)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 67999999999999999999999999999999986422 233456678899999999999999999876544 35
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+|+||||+.+ +|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 83 VYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred EEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 8999999965 88888754 579999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
. ........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 161 ~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 161 D----------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred c----------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 0 0001223578999999998765 5689999999999999999999999977
Q ss_pred CChhhHHHhhhccC----------------------------CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 823 EHPQQIFDNILNRK----------------------------IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~----------------------------~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
.+.......+.... .++.......+.++.+||.+||+.+|.+|| ++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp---t~~e~ 289 (336)
T cd07849 213 KDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRI---TVEEA 289 (336)
T ss_pred CCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCc---CHHHH
Confidence 65433322221100 000011134688899999999999999999 99999
Q ss_pred HcCCCCCCC
Q 001857 875 KQHVFFKDI 883 (1003)
Q Consensus 875 LqHPFFk~I 883 (1003)
++||||+.+
T Consensus 290 l~hp~~~~~ 298 (336)
T cd07849 290 LAHPYLEQY 298 (336)
T ss_pred hcCcccccc
Confidence 999999854
No 252
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=378.24 Aligned_cols=250 Identities=33% Similarity=0.540 Sum_probs=214.6
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
-+||+|.||+||.|+++.|....|||-+.... ....+.+..|+.+.+.|+|.|||++++.+...+++-|.||-++||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 36999999999999999999999999886432 445678889999999999999999999999999999999999999
Q ss_pred ChHHHHHh-cCCC--CHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-CCcEEEeecCCccccccCCCCCCCCC
Q 001857 675 DLYSLLRN-LGCL--DEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINSTDDLSGP 750 (1003)
Q Consensus 675 SL~d~L~~-~g~L--~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~~~ddls~p 750 (1003)
+|.++++. +|++ .|..+-+|.+||+.||.|||.+.|||||||-+||||+- .|.+||+|||.++..-
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA---------- 727 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA---------- 727 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc----------
Confidence 99999975 5888 89999999999999999999999999999999999975 7999999999988410
Q ss_pred CccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCCCC-h-h
Q 001857 751 AVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNAEH-P-Q 826 (1003)
Q Consensus 751 ~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~kSDIWSLGVILYELLTGk~PF~~~~-~-~ 826 (1003)
.-...+.++.||..|||||++.. .+|+.++|||||||++.||.||+|||.... + .
T Consensus 728 ---------------------ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA 786 (1226)
T KOG4279|consen 728 ---------------------GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA 786 (1226)
T ss_pred ---------------------cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH
Confidence 01123457899999999999975 469999999999999999999999996432 2 2
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
.+++-=+- ..-|.+|..+|.+++.||.+|+..||.+|| +|.++|..||++.-
T Consensus 787 AMFkVGmy--KvHP~iPeelsaeak~FilrcFepd~~~R~---sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 787 AMFKVGMY--KVHPPIPEELSAEAKNFILRCFEPDPCDRP---SAKDLLQDPFLQHN 838 (1226)
T ss_pred hhhhhcce--ecCCCCcHHHHHHHHHHHHHHcCCCcccCc---cHHHhccCcccccC
Confidence 22222111 123678899999999999999999999999 99999999999854
No 253
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.3e-39 Score=347.83 Aligned_cols=254 Identities=25% Similarity=0.372 Sum_probs=209.1
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCE----EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDL----FAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~----VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
...+|++++.||+|+||.||+|++..++.. ||+|+++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 346799999999999999999998766654 8999986432 234456788999999999999999999988764
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
..++++||+++|+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 578999999999999999875 4688999999999999999999999999999999999999999999999999984110
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF 820 (1003)
... ........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 162 ~~~-----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~ 212 (316)
T cd05108 162 DEK-----------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 212 (316)
T ss_pred CCc-----------------------------ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 000 001112345678999999999999999999999999999997 99999
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.+....++... ......++ .+..++.++.++|.+||..+|.+|| ++.+++.+
T Consensus 213 ~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~l~~~ 264 (316)
T cd05108 213 DGIPASEISSI-LEKGERLP-QPPICTIDVYMIMVKCWMIDADSRP---KFRELIIE 264 (316)
T ss_pred CCCCHHHHHHH-HhCCCCCC-CCCCCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 88776665443 33333333 3456889999999999999999999 89999876
No 254
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.6e-39 Score=333.48 Aligned_cols=246 Identities=28% Similarity=0.410 Sum_probs=205.1
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
+.||+|+||.||+|+++.+++.||+|.+... ........+.+|+.+++.++||||+++++++.....+|+||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 3689999999999999999999999987643 23445577889999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 675 DLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 675 SL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..... . ..
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~---~-----~~- 149 (252)
T cd05084 79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEED---G-----VY- 149 (252)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccc---c-----cc-
Confidence 999999765 4689999999999999999999999999999999999999999999999999873100 0 00
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhHHHhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNI 832 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkI 832 (1003)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...........+
T Consensus 150 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~ 209 (252)
T cd05084 150 --------------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI 209 (252)
T ss_pred --------------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH
Confidence 000001123567999999998889999999999999999997 99999877776665555
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 833 l~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..... +..+..++..+.+||.+||+.+|.+|| ++.++++
T Consensus 210 ~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~~~ 248 (252)
T cd05084 210 EQGVR--LPCPELCPDAVYRLMERCWEYDPGQRP---SFSTVHQ 248 (252)
T ss_pred HcCCC--CCCcccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 44322 234567899999999999999999999 8888764
No 255
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.2e-39 Score=353.05 Aligned_cols=256 Identities=29% Similarity=0.477 Sum_probs=212.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE----- 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~----- 662 (1003)
.++|++++.||+|+||.||+|.+..++..||||++.+.. ........+.+|+.+|+.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 367999999999999999999999999999999986532 22334457889999999999999999999987654
Q ss_pred -eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 663 -NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 -~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
.+|+||||+ |++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~- 169 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD- 169 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc-
Confidence 469999999 7799888864 579999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
.......|++.|+|||++.+ ..++.++|+|||||++|+|++|.+||
T Consensus 170 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf 216 (343)
T cd07880 170 ---------------------------------SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLF 216 (343)
T ss_pred ---------------------------------cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 00123467899999999876 45789999999999999999999999
Q ss_pred CCCChhhHHHhhhccCCC----------------------------CCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 821 NAEHPQQIFDNILNRKIP----------------------------WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~----------------------------~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
.+.+....+..++..... +......+++.+.++|.+||+.||.+|| ++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~---t~~ 293 (343)
T cd07880 217 KGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRI---TAA 293 (343)
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCC---CHH
Confidence 877655554444332111 0112246788999999999999999999 999
Q ss_pred HHHcCCCCCCC
Q 001857 873 EVKQHVFFKDI 883 (1003)
Q Consensus 873 ELLqHPFFk~I 883 (1003)
+++.||||+..
T Consensus 294 ~~l~~~~~~~~ 304 (343)
T cd07880 294 EALAHPYFEEF 304 (343)
T ss_pred HHhcCccHhhh
Confidence 99999999854
No 256
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.9e-39 Score=354.35 Aligned_cols=262 Identities=29% Similarity=0.465 Sum_probs=212.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec----cceE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC----RENL 664 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d----~~~l 664 (1003)
++|++.+.||.|+||.||+|.++.+|+.||+|++..... .......+.+|+.+|+.++||||++++++|.. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 579999999999999999999999999999999876432 22345677889999999999999999988763 3578
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.......
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99999995 59999998878899999999999999999999999999999999999999999999999999874111000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
. ........+|+..|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 163 ~---------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~ 215 (334)
T cd07855 163 E---------------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGK 215 (334)
T ss_pred C---------------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCC
Confidence 0 0011123578999999999876 45899999999999999999999999876
Q ss_pred ChhhHHHhhhcc-----------------------C-----CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 824 HPQQIFDNILNR-----------------------K-----IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 824 ~~~ei~qkIl~~-----------------------~-----~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
+.......+... . .++..+....+.++.+||.+||+.+|.+|| ++.+++
T Consensus 216 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~~l 292 (334)
T cd07855 216 NYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERI---TVEQAL 292 (334)
T ss_pred ChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCc---CHHHHH
Confidence 544332222210 0 000111245789999999999999999999 999999
Q ss_pred cCCCCCC
Q 001857 876 QHVFFKD 882 (1003)
Q Consensus 876 qHPFFk~ 882 (1003)
.||||+.
T Consensus 293 ~~~~~~~ 299 (334)
T cd07855 293 QHPFLAQ 299 (334)
T ss_pred hChhhhh
Confidence 9999984
No 257
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.2e-38 Score=334.23 Aligned_cols=254 Identities=23% Similarity=0.317 Sum_probs=213.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~t---gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
.++|++.+.||+|+||+||+|++..+ ...||+|++.... .......+.+|+.++..++||||+++++.+...+.+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 36799999999999999999998644 4589999986543 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|+||||+++++|.+++... +.+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||+++.... .
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~-~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED-S 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccc-c
Confidence 9999999999999999764 5789999999999999999999999999999999999999999999999999884210 0
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
.. ........+++.|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus 160 ~~----------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~ 211 (266)
T cd05033 160 EA----------------------------TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred cc----------------------------ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCC
Confidence 00 001112345678999999998889999999999999999998 9999988
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
....+....+..... . ..+..++..+.+|+.+||+.+|.+|| ++.+++++
T Consensus 212 ~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~li~~cl~~~p~~Rp---~~~ei~~~ 261 (266)
T cd05033 212 MSNQDVIKAVEDGYR-L-PPPMDCPSALYQLMLDCWQKDRNERP---TFSQIVST 261 (266)
T ss_pred CCHHHHHHHHHcCCC-C-CCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHHH
Confidence 777777777654422 1 23467899999999999999999999 89888765
No 258
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.8e-39 Score=340.30 Aligned_cols=254 Identities=31% Similarity=0.539 Sum_probs=210.1
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|++++.||.|++|.||+|.++.+|..||+|++..... .......+.+|+.+++.++||||+++++++.+.+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999876432 223345678899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 671 LNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 671 ~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
++ ++|.+++.... .+++..+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||+++.....
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~------ 152 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP------ 152 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC------
Confidence 95 69999997765 7899999999999999999999999999999999999999999999999998631000
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
........+++.|+|||++.+. .++.++|||||||++|+|++|++||...+...
T Consensus 153 -------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 207 (283)
T cd07835 153 -------------------------VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID 207 (283)
T ss_pred -------------------------ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0011233578899999988764 47889999999999999999999998776544
Q ss_pred HHHhhhccCC--------------------------CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 828 IFDNILNRKI--------------------------PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 828 i~qkIl~~~~--------------------------~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
....+..... ........++..+.++|.+||+.||.+|| ++.++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~il~~~~~ 283 (283)
T cd07835 208 QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI---SAKAALQHPYF 283 (283)
T ss_pred HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCc---CHHHHhcCCCC
Confidence 4333322100 00112345788999999999999999999 99999999998
No 259
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.6e-39 Score=342.40 Aligned_cols=250 Identities=24% Similarity=0.400 Sum_probs=210.1
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGD--LFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk--~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~ly 665 (1003)
++|++.+.||+|+||.||+|....++. .+++|.++.. ......+.+.+|+.++.++ +||||+++++++.....+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 679999999999999999999877765 4688877632 2334456788999999999 7999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEE
Q 001857 666 LVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIK 729 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g----------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VK 729 (1003)
+||||+++|+|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997542 478899999999999999999999999999999999999999999
Q ss_pred EeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHH
Q 001857 730 LTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGII 809 (1003)
Q Consensus 730 LiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVI 809 (1003)
|+|||++..... ........++..|+|||++.+..++.++|||||||+
T Consensus 160 l~dfg~~~~~~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i 207 (297)
T cd05089 160 IADFGLSRGEEV--------------------------------YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVL 207 (297)
T ss_pred ECCcCCCccccc--------------------------------eeccCCCCcCccccCchhhccCCCCchhhHHHHHHH
Confidence 999999862100 000111223557999999999889999999999999
Q ss_pred HHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 810 LFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 810 LYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
+|||++ |..||......+.+..+..... +..+..++.++.+||.+||..+|.+|| +++++++.
T Consensus 208 l~el~t~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~~ 271 (297)
T cd05089 208 LWEIVSLGGTPYCGMTCAELYEKLPQGYR--MEKPRNCDDEVYELMRQCWRDRPYERP---PFAQISVQ 271 (297)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 999997 9999998888887777765422 334567899999999999999999999 88888765
No 260
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-39 Score=375.54 Aligned_cols=268 Identities=24% Similarity=0.353 Sum_probs=200.6
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCC-CCEEEEE--------------EeeccccccHHHHHHHHHHHHHHHhcCCCcE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTT-GDLFAIK--------------VLKKADMIRKNAVESILAERDILISVRNPFV 651 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~t-gk~VALK--------------VIkks~i~~~~~ie~~lrEi~IL~~L~HPNI 651 (1003)
.+++|++++.||+|+||+||+|..+.. +..++.| ++.+...........+.+|+.+|..++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 356899999999999999999976532 2222222 1111111122344668899999999999999
Q ss_pred EEEEeeeeccceEEEEEEeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC
Q 001857 652 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG 726 (1003)
Q Consensus 652 VkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~-----g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG 726 (1003)
+++++++...+..|+|||++. ++|..++... .......++.++.||+.||+|||++|||||||||+|||++.+|
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 999999999999999999995 5888877542 2244667888999999999999999999999999999999999
Q ss_pred cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeech
Q 001857 727 HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSV 806 (1003)
Q Consensus 727 ~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSL 806 (1003)
.+||+|||+++..... ........+||+.|+|||++.+..|+.++|||||
T Consensus 305 ~vkL~DFGla~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 354 (501)
T PHA03210 305 KIVLGDFGTAMPFEKE------------------------------REAFDYGWVGTVATNSPEILAGDGYCEITDIWSC 354 (501)
T ss_pred CEEEEeCCCceecCcc------------------------------cccccccccCCcCCCCchhhcCCCCCcHHHHHHH
Confidence 9999999999741100 0011234689999999999999999999999999
Q ss_pred hHHHHHHHhCCCC-CCCC--ChhhHHHhhhcc-C---CCCCC----------------C---------CCCCCHHHHHHH
Q 001857 807 GIILFELIVGIPP-FNAE--HPQQIFDNILNR-K---IPWPR----------------V---------PEEMSPEAHDLI 854 (1003)
Q Consensus 807 GVILYELLTGk~P-F~~~--~~~ei~qkIl~~-~---~~~P~----------------l---------p~~iS~elkDLI 854 (1003)
||++|||++|..+ |... .....+.+++.. . ..+|. . ...++.++.++|
T Consensus 355 Gvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li 434 (501)
T PHA03210 355 GLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPL 434 (501)
T ss_pred HHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHH
Confidence 9999999998754 4322 222222222110 0 00110 0 013567888999
Q ss_pred HhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHH
Q 001857 855 DRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTL 888 (1003)
Q Consensus 855 rrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L 888 (1003)
.+||++||.+|| ++.|+|+||||.....+.+
T Consensus 435 ~kmL~~DP~~Rp---sa~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 435 VKMLTFDWHLRP---GAAELLALPLFSAEEEEEI 465 (501)
T ss_pred HHHhccCcccCc---CHHHHhhChhhhcCCchHH
Confidence 999999999999 9999999999998766554
No 261
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.1e-38 Score=335.50 Aligned_cols=253 Identities=33% Similarity=0.540 Sum_probs=208.6
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeeeccce----
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFTCREN---- 663 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L---~HPNIVkL~~~f~d~~~---- 663 (1003)
|++.+.||.|+||.||+|+++.+++.||+|+++.... .......+.+|+.++..+ +||||+++++.+...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7899999999999999999988899999999975432 222234566787777665 69999999999998776
Q ss_pred -EEEEEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 664 -LYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 664 -lyLVmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
+|++|||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++....
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 9999999975 8999887643 58999999999999999999999999999999999999999999999999987310
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
.. .......|++.|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus 159 ~~--------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~ 206 (287)
T cd07838 159 FE--------------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLF 206 (287)
T ss_pred CC--------------------------------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcc
Confidence 00 0112245788999999999998999999999999999999999999
Q ss_pred CCCChhhHHHhhhccCC-----CCC-------------------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 821 NAEHPQQIFDNILNRKI-----PWP-------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~-----~~P-------------------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+.+..+.+.++..... .++ .....++..+.+||.+||+.||.+|| ++.++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---~~~~il~ 283 (287)
T cd07838 207 RGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRI---SAFEALQ 283 (287)
T ss_pred cCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCC---CHHHHhc
Confidence 98887776666543110 000 01123568889999999999999999 9999999
Q ss_pred CCCC
Q 001857 877 HVFF 880 (1003)
Q Consensus 877 HPFF 880 (1003)
||||
T Consensus 284 ~~~~ 287 (287)
T cd07838 284 HPYF 287 (287)
T ss_pred CcCC
Confidence 9998
No 262
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.4e-39 Score=352.48 Aligned_cols=259 Identities=30% Similarity=0.461 Sum_probs=211.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----ce
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-----EN 663 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~-----~~ 663 (1003)
.+|++++.||+|+||+||+|++..+++.||||.+..... .......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 569999999999999999999999999999999875432 223345677899999999999999999887654 35
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~-- 160 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE-- 160 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC--
Confidence 899999995 69999998888899999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
. ........||..|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 161 ~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 211 (337)
T cd07858 161 K-----------------------------GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPG 211 (337)
T ss_pred C-----------------------------cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCC
Confidence 0 001123568899999999875 4689999999999999999999999987
Q ss_pred CChhhHHHhhhcc----------------------------CCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 823 EHPQQIFDNILNR----------------------------KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 823 ~~~~ei~qkIl~~----------------------------~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
.+....+..+... ...+......+++++.+||++||+.+|.+|| ++.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---s~~el 288 (337)
T cd07858 212 KDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRI---TVEEA 288 (337)
T ss_pred CChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhcc---CHHHH
Confidence 6543333222210 0000112246789999999999999999999 99999
Q ss_pred HcCCCCCCC
Q 001857 875 KQHVFFKDI 883 (1003)
Q Consensus 875 LqHPFFk~I 883 (1003)
++||||..+
T Consensus 289 l~h~~~~~~ 297 (337)
T cd07858 289 LAHPYLASL 297 (337)
T ss_pred HcCcchhhh
Confidence 999999754
No 263
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.4e-38 Score=331.92 Aligned_cols=246 Identities=27% Similarity=0.478 Sum_probs=208.1
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeee-eccce
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSF-TCREN 663 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f-~d~~~ 663 (1003)
.....+|++.+.||+|+||.||++... |..||+|.++... ..+.+.+|+.+++.++|+||+++++++ .....
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 345678999999999999999999764 7889999886432 245688999999999999999999875 45567
Q ss_pred EEEEEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 664 LYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
+|++|||+++++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 999999999999999997653 488999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF 820 (1003)
......++..|+|||++.+..++.++|||||||++|+|++ |++||
T Consensus 155 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~ 200 (256)
T cd05082 155 ----------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200 (256)
T ss_pred ----------------------------------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence 0112334567999999999889999999999999999997 99999
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
...+..++...+..... +..+..+++.+.++|.+||+.+|.+|| ++.++++
T Consensus 201 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~l~~ 251 (256)
T cd05082 201 PRIPLKDVVPRVEKGYK--MDAPDGCPPVVYDVMKQCWHLDAATRP---SFLQLRE 251 (256)
T ss_pred CCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhcCChhhCc---CHHHHHH
Confidence 98887777776654422 345567899999999999999999999 8888765
No 264
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.5e-39 Score=354.63 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=210.0
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk-----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~ 657 (1003)
|...-++|++.+.||.|+||.||+|++. .+++.||+|++.... .......+.+|+.++..+ +||||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 4445568999999999999999999754 345789999987532 233456778899999999 89999999998
Q ss_pred eec-cceEEEEEEeccCCChHHHHHhc-----------------------------------------------------
Q 001857 658 FTC-RENLYLVMEYLNGGDLYSLLRNL----------------------------------------------------- 683 (1003)
Q Consensus 658 f~d-~~~lyLVmEy~~GGSL~d~L~~~----------------------------------------------------- 683 (1003)
+.. ...+|++|||+++++|.+++...
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 765 45789999999999999998542
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCc
Q 001857 684 --------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGT 755 (1003)
Q Consensus 684 --------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~t 755 (1003)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~------------ 227 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP------------ 227 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCc------------
Confidence 257889999999999999999999999999999999999999999999999987421000
Q ss_pred ccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhHHHhhhc
Q 001857 756 TLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILN 834 (1003)
Q Consensus 756 tl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~ 834 (1003)
.........++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+...+.
T Consensus 228 -----------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~ 290 (337)
T cd05054 228 -----------------DYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK 290 (337)
T ss_pred -----------------chhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh
Confidence 0011223456788999999999999999999999999999998 9999987655444444433
Q ss_pred cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 835 RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 835 ~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
... .+..+..+++++.+++.+||+.+|++|| ++.++++|
T Consensus 291 ~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~RP---s~~ell~~ 329 (337)
T cd05054 291 EGT-RMRAPEYATPEIYSIMLDCWHNNPEDRP---TFSELVEI 329 (337)
T ss_pred ccC-CCCCCccCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 322 2334567889999999999999999999 89999876
No 265
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.5e-39 Score=334.31 Aligned_cols=246 Identities=25% Similarity=0.388 Sum_probs=205.3
Q ss_pred EeeccCceEEEEEEE--CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 596 PISRGAFGRVFLAKK--RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 596 ~LG~G~FGtVyLArd--k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
.||+|+||.||+|.+ ..++..||+|+++... ......+.+.+|+.+++.++||||+++++.+. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999965 4577899999987543 23445678899999999999999999998875 4567999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 674 GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 674 GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
|+|.+++...+.+++..+..++.||+.||+|||++||+||||||.|||++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~--------- 150 (257)
T cd05116 80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN--------- 150 (257)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCC---------
Confidence 99999998878899999999999999999999999999999999999999999999999999873110000
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhHHHhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNI 832 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkI 832 (1003)
.........+++.|+|||++.+..++.++|||||||++|||++ |.+||...+..++.+.+
T Consensus 151 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i 211 (257)
T cd05116 151 -------------------YYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMI 211 (257)
T ss_pred -------------------eeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 0000112345688999999988889999999999999999998 99999988887777777
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 833 l~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..+.. +..+..+++++.+||.+||+.||.+|| ++.+|..
T Consensus 212 ~~~~~--~~~~~~~~~~l~~li~~~~~~~p~~Rp---~~~~i~~ 250 (257)
T cd05116 212 ESGER--MECPQRCPPEMYDLMKLCWTYGVDERP---GFAVVEL 250 (257)
T ss_pred HCCCC--CCCCCCCCHHHHHHHHHHhccCchhCc---CHHHHHH
Confidence 65432 446678999999999999999999999 6666543
No 266
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.4e-38 Score=336.52 Aligned_cols=253 Identities=24% Similarity=0.378 Sum_probs=208.9
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk----~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
..++|++++.||.|+||+||+|++..++. .||+|+++... .......+.+|..++..++||||+++++.+.. .
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~ 81 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-S 81 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-C
Confidence 34679999999999999999999877766 48999986542 23345678899999999999999999998875 4
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
..+++|||+++|+|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||+++++.+||+|||+++....
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 578999999999999999764 5699999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF 820 (1003)
... ........+++.|+|||++.+..++.++|||||||++|||++ |.+||
T Consensus 162 ~~~-----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 212 (279)
T cd05109 162 DET-----------------------------EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPY 212 (279)
T ss_pred ccc-----------------------------eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCC
Confidence 000 000112245678999999999999999999999999999998 99999
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.......+...+..... +..+..++.++.++|.+||..||.+|| ++.+++.
T Consensus 213 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp---~~~~l~~ 263 (279)
T cd05109 213 DGIPAREIPDLLEKGER--LPQPPICTIDVYMIMVKCWMIDSECRP---RFRELVD 263 (279)
T ss_pred CCCCHHHHHHHHHCCCc--CCCCccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 87776666655544322 233567899999999999999999999 8888885
No 267
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.2e-39 Score=349.88 Aligned_cols=261 Identities=30% Similarity=0.462 Sum_probs=218.8
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----eE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-----NL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~-----~l 664 (1003)
+|++.+.||.|+||.||+|++..+++.||+|++.+.. ......+.+.+|+.+++.++||||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999999899999999987643 12334567889999999999999999999988875 79
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|++|||+.+ +|.+++.+.+.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++........
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred EEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 999999974 8999998878899999999999999999999999999999999999999999999999999874111000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
.........||+.|+|||++.+. .++.++|+|||||++|+|++|.+||.+.
T Consensus 159 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~ 210 (330)
T cd07834 159 ----------------------------EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR 210 (330)
T ss_pred ----------------------------ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence 00112335689999999999887 7899999999999999999999999988
Q ss_pred ChhhHHHhhhccCCCC----------------------------CCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 824 HPQQIFDNILNRKIPW----------------------------PRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~----------------------------P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
+..+.+..+....... ......++.++.+||.+||+++|.+|| ++.+++
T Consensus 211 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~ll 287 (330)
T cd07834 211 DYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRI---TADEAL 287 (330)
T ss_pred CHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCC---CHHHHH
Confidence 8766666555421110 111234688999999999999999999 999999
Q ss_pred cCCCCCCC
Q 001857 876 QHVFFKDI 883 (1003)
Q Consensus 876 qHPFFk~I 883 (1003)
+||||+++
T Consensus 288 ~~~~~~~~ 295 (330)
T cd07834 288 AHPYLAQL 295 (330)
T ss_pred hCccHHhh
Confidence 99999854
No 268
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-38 Score=342.99 Aligned_cols=256 Identities=23% Similarity=0.388 Sum_probs=212.0
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECC-------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRT-------TGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~-------tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~ 657 (1003)
...++|.+.+.||+|+||.||+|++.. +...||+|++.... .......+.+|+.++..+ +||||++++++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 344789999999999999999998743 23579999987542 233456788899999999 79999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCccee
Q 001857 658 FTCRENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLL 721 (1003)
Q Consensus 658 f~d~~~lyLVmEy~~GGSL~d~L~~~g----------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNIL 721 (1003)
+.....+|+||||+++|+|.+++...+ .++...+..++.||+.||+|||++||+||||||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence 999999999999999999999997642 4788899999999999999999999999999999999
Q ss_pred ecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccc
Q 001857 722 IAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTA 801 (1003)
Q Consensus 722 Ld~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kS 801 (1003)
++.++.+||+|||+++.... .. .........+++.|+|||++.+..++.++
T Consensus 173 l~~~~~~kL~dfg~a~~~~~--~~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 223 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHH--ID---------------------------YYKKTTNGRLPVKWMAPEALFDRIYTHQS 223 (307)
T ss_pred EcCCCcEEECCCcccccccc--cc---------------------------hhhccccCCCccceeChHHhccCCCCcHH
Confidence 99999999999999873110 00 00001122355789999999998899999
Q ss_pred eeechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 802 DWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 802 DIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|||||||++|||++ |..||.+....+++..+..... +..+..++.++.+||.+||..+|.+|| ++.+++++
T Consensus 224 DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~evl~~ 295 (307)
T cd05098 224 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRP---TFKQLVED 295 (307)
T ss_pred HHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcccChhhCc---CHHHHHHH
Confidence 99999999999998 8999988887777766654432 345667899999999999999999999 88888765
No 269
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1e-38 Score=334.48 Aligned_cols=252 Identities=22% Similarity=0.351 Sum_probs=206.9
Q ss_pred eEEEEEeeccCceEEEEEEECCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------c
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGD--LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------E 662 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk--~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~------~ 662 (1003)
|.+.+.||+|+||.||+|++..++. .||+|.++... ......+.+.+|..+++.++||||+++++.+... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3467889999999999999877765 69999887643 2344567889999999999999999999876432 2
Q ss_pred eEEEEEEeccCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
..+++|||+.+|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887421 34889999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV- 815 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT- 815 (1003)
+....... ........+++.|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~-----------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~ 210 (272)
T cd05075 160 KKIYNGDY-----------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATR 210 (272)
T ss_pred cccCcccc-----------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcC
Confidence 74110000 000122356778999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|..||.+....+++..+..... +..+..++..+.++|.+||+.||.+|| ++.+|+++
T Consensus 211 g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~l~~~ 267 (272)
T cd05075 211 GQTPYPGVENSEIYDYLRQGNR--LKQPPDCLDGLYSLMSSCWLLNPKDRP---SFETLRCE 267 (272)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHHH
Confidence 8999988887777777765443 234567889999999999999999999 88888764
No 270
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.3e-38 Score=339.34 Aligned_cols=268 Identities=29% Similarity=0.465 Sum_probs=209.7
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------ 661 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~------ 661 (1003)
+++|++.+.||.|+||.||+|+++.+++.||+|++....... .....+.+|+.+++.++||||+++++.+...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 588999999999999999999999999999999987543221 1224567899999999999999999877543
Q ss_pred --ceEEEEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 662 --ENLYLVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 662 --~~lyLVmEy~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
..+|+||||+.+ +|...+.. ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++.
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 357999999965 77777754 35799999999999999999999999999999999999999999999999999874
Q ss_pred cccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCC
Q 001857 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGI 817 (1003)
Q Consensus 739 ~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk 817 (1003)
.......... .............||+.|+|||++.+. .++.++|||||||++|+|++|+
T Consensus 165 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~ 224 (311)
T cd07866 165 YDGPPPNPKG--------------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR 224 (311)
T ss_pred ccCCCccccc--------------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCC
Confidence 2111000000 000011123456789999999998754 5789999999999999999999
Q ss_pred CCCCCCChhhHHHhhhccCCCC-----------C---------CC-------CCCCCHHHHHHHHhhccCCcCCcCCCCC
Q 001857 818 PPFNAEHPQQIFDNILNRKIPW-----------P---------RV-------PEEMSPEAHDLIDRFLTEDPHQRLGSGG 870 (1003)
Q Consensus 818 ~PF~~~~~~ei~qkIl~~~~~~-----------P---------~l-------p~~iS~elkDLIrrcL~kDP~kRPg~~T 870 (1003)
+||.+.+.....+.+....... + .. ...+++.+.+||.+||+.||.+|| +
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~---t 301 (311)
T cd07866 225 PILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRL---T 301 (311)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCc---C
Confidence 9998877766555544311100 0 00 123557899999999999999999 9
Q ss_pred HHHHHcCCCC
Q 001857 871 ASEVKQHVFF 880 (1003)
Q Consensus 871 AeELLqHPFF 880 (1003)
+.+++.||||
T Consensus 302 ~~ell~~~~f 311 (311)
T cd07866 302 ASDALEHPYF 311 (311)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 271
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.2e-38 Score=332.10 Aligned_cols=250 Identities=22% Similarity=0.376 Sum_probs=211.5
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++++.||+|+||+||+|.+.. +..||+|.+..... ..+.+.+|+.++..++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 4679999999999999999998753 45699998875432 235678999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||+.+|+|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++..... .
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~-~-- 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD-E-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCC-c--
Confidence 9999999999999764 46899999999999999999999999999999999999999999999999998731100 0
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~ 825 (1003)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 155 ---------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 207 (256)
T cd05113 155 ---------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN 207 (256)
T ss_pred ---------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 000112345678999999998889999999999999999998 9999988887
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
......+...... ..+...+..+.+++.+||..+|.+|| ++.+|+++
T Consensus 208 ~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~ll~~ 254 (256)
T cd05113 208 SETVEKVSQGLRL--YRPHLASEKVYAIMYSCWHEKAEERP---TFQQLLSS 254 (256)
T ss_pred HHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCC---CHHHHHHh
Confidence 7777777665432 23456789999999999999999999 89999865
No 272
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.2e-38 Score=330.15 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=210.1
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
..++|++.+.||.|+||.||+|.+. +++.||+|.++.... ..+.+.+|+.+++.++||||+++++++...+.+|+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYI 78 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeee
Confidence 4467999999999999999999975 457899999876432 23567889999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||||++|++|.+++.... .++...+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 157 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI- 157 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc-
Confidence 999999999999997654 68999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~ 823 (1003)
........++..|+|||++.+..++.++|||||||++|||++ |+.||.+.
T Consensus 158 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 208 (261)
T cd05068 158 -----------------------------YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM 208 (261)
T ss_pred -----------------------------ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 000011223467999999999889999999999999999999 99999988
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
....++..+.... .. ..+..++..+.+++.+||+.+|.+|| ++.++++
T Consensus 209 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~P~~Rp---~~~~l~~ 256 (261)
T cd05068 209 TNAEVLQQVDQGY-RM-PCPPGCPKELYDIMLDCWKEDPDDRP---TFETLQW 256 (261)
T ss_pred CHHHHHHHHHcCC-CC-CCCCcCCHHHHHHHHHHhhcCcccCC---CHHHHHH
Confidence 8877777765442 22 23457889999999999999999999 7777754
No 273
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.1e-39 Score=350.97 Aligned_cols=260 Identities=25% Similarity=0.401 Sum_probs=205.3
Q ss_pred Eeecc--CceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 596 PISRG--AFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 596 ~LG~G--~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
.||.| +||+||+|++..+|+.||+|++...... ....+.+.+|+.+++.++||||++++++|...+.+|+||||+.+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 45666 9999999999999999999998765432 34457888999999999999999999999999999999999999
Q ss_pred CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCC
Q 001857 674 GDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPA 751 (1003)
Q Consensus 674 GSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~ 751 (1003)
++|.+++.+. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++++|||.+........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~------- 156 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ------- 156 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc-------
Confidence 9999999765 3589999999999999999999999999999999999999999999999986542100000
Q ss_pred ccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC--CCCccceeechhHHHHHHHhCCCCCCCCChhhHH
Q 001857 752 VSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT--GHGTTADWWSVGIILFELIVGIPPFNAEHPQQIF 829 (1003)
Q Consensus 752 ~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~--~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~ 829 (1003)
..... ........++..|||||++.+. .++.++|||||||++|+|++|.+||.........
T Consensus 157 -~~~~~----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~ 219 (328)
T cd08226 157 -KAKVV----------------YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML 219 (328)
T ss_pred -ccccc----------------ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH
Confidence 00000 0001123456789999999763 4789999999999999999999999876554443
Q ss_pred HhhhccCCCCC--------------------------------------------CCCCCCCHHHHHHHHhhccCCcCCc
Q 001857 830 DNILNRKIPWP--------------------------------------------RVPEEMSPEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 830 qkIl~~~~~~P--------------------------------------------~lp~~iS~elkDLIrrcL~kDP~kR 865 (1003)
..++......| ..+..++..+.+||++||+.||.+|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 299 (328)
T cd08226 220 LQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKR 299 (328)
T ss_pred HHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccC
Confidence 33332211000 0122367789999999999999999
Q ss_pred CCCCCHHHHHcCCCCCCC
Q 001857 866 LGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 866 Pg~~TAeELLqHPFFk~I 883 (1003)
| |+.++++||||+++
T Consensus 300 p---ta~e~l~~~~~~~~ 314 (328)
T cd08226 300 P---SASSLLSHAFFKQV 314 (328)
T ss_pred C---CHHHHhhCHHHHHH
Confidence 9 99999999999754
No 274
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.2e-38 Score=328.58 Aligned_cols=245 Identities=28% Similarity=0.464 Sum_probs=211.6
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
..++|++.+.||.|+||.||+|... |+.||+|.+..... ..+.+.+|..+++.++|+||+++++.+.+....|+
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 77 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI 77 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE
Confidence 4578999999999999999999874 78999999876432 45778899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~--- 154 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ--- 154 (256)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccc---
Confidence 999999999999998765 699999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~ 823 (1003)
......++..|+|||++.+..++.++|||||||++|+|++ |..||...
T Consensus 155 -------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 203 (256)
T cd05039 155 -------------------------------GQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred -------------------------------ccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 0012234567999999998889999999999999999997 99999888
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
...++...+..... +..+..+++++.+||.+||..+|.+|| ++.++++
T Consensus 204 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 251 (256)
T cd05039 204 PLKDVVPHVEKGYR--MEAPEGCPPEVYKVMKDCWELDPAKRP---TFKQLRE 251 (256)
T ss_pred CHHHHHHHHhcCCC--CCCccCCCHHHHHHHHHHhccChhhCc---CHHHHHH
Confidence 87777666554322 344567899999999999999999999 8888875
No 275
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-38 Score=332.96 Aligned_cols=250 Identities=23% Similarity=0.407 Sum_probs=209.9
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
..+|++.+.||+|+||.||+|+++ ++..+|+|++.+.... ...+.+|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 356999999999999999999985 5678999998754321 24577899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||++|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~---- 153 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD---- 153 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccc----
Confidence 9999999999999764 56899999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~ 825 (1003)
. ........++..|+|||.+.+..++.++|||||||++|+|++ |.+||.....
T Consensus 154 ----~----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 207 (256)
T cd05059 154 ----Q----------------------YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN 207 (256)
T ss_pred ----c----------------------ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH
Confidence 0 000111234567999999999899999999999999999998 8999988877
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.+....+..... +..+..++.++.+++.+||..+|.+|| ++.++++.
T Consensus 208 ~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~~~l~~ 254 (256)
T cd05059 208 SEVVESVSAGYR--LYRPKLAPTEVYTIMYSCWHEKPEDRP---AFKKLLSQ 254 (256)
T ss_pred HHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHhcCChhhCc---CHHHHHHH
Confidence 777766654321 234556899999999999999999999 89998864
No 276
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=7.6e-39 Score=351.76 Aligned_cols=256 Identities=30% Similarity=0.484 Sum_probs=209.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc------
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE------ 662 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~------ 662 (1003)
++|.+.+.||+|+||.||+|++..+|+.||+|++.+... .......+.+|+.+++.++||||+++++++....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 579999999999999999999999999999999876432 2233456789999999999999999999887543
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
.+|+||||+.+ +|..++. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~-- 168 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD-- 168 (342)
T ss_pred eEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC--
Confidence 46999999964 7776652 468999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 169 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 169 --------------------------------AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred --------------------------------CCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 00123467899999999876 458899999999999999999999999
Q ss_pred CCChhhHHHhhhccCC----------------------------CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHH
Q 001857 822 AEHPQQIFDNILNRKI----------------------------PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~----------------------------~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeE 873 (1003)
+.+....+..+..... .+.......+..+.+||.+||+.||.+|| ++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~---~~~e 293 (342)
T cd07879 217 GKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRL---TATE 293 (342)
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCc---CHHH
Confidence 8775554444332100 00011124678899999999999999999 9999
Q ss_pred HHcCCCCCCCCh
Q 001857 874 VKQHVFFKDINW 885 (1003)
Q Consensus 874 LLqHPFFk~Idw 885 (1003)
++.||||+.+..
T Consensus 294 ~l~h~~f~~~~~ 305 (342)
T cd07879 294 ALEHPYFDSFRD 305 (342)
T ss_pred HhcCcchhhccc
Confidence 999999987643
No 277
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.8e-38 Score=338.85 Aligned_cols=252 Identities=27% Similarity=0.428 Sum_probs=211.5
Q ss_pred cCCeEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk-----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
..+|.+.+.||+|+||.||+|++. .++..+++|.+.... ....+.+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 467999999999999999999864 345679999876533 233467889999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG 726 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g----------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG 726 (1003)
..++||||+++++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999999999999997543 378899999999999999999999999999999999999999
Q ss_pred cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeech
Q 001857 727 HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSV 806 (1003)
Q Consensus 727 ~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSL 806 (1003)
.++|+|||+++...... .........|++.|+|||++.+..++.++|||||
T Consensus 161 ~~~l~dfg~a~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 211 (291)
T cd05094 161 LVKIGDFGMSRDVYSTD-----------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211 (291)
T ss_pred cEEECCCCcccccCCCc-----------------------------eeecCCCCCcceeecChHHhccCCCCchhhHHHH
Confidence 99999999987311000 0011123467889999999999999999999999
Q ss_pred hHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 807 GIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 807 GVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
||++|||++ |.+||...+..+..+.+..... +..+..++..+.+||.+||+.+|.+|| ++.++++
T Consensus 212 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~v~~ 277 (291)
T cd05094 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRV--LERPRVCPKEVYDIMLGCWQREPQQRL---NIKEIYK 277 (291)
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCC--CCCCccCCHHHHHHHHHHcccChhhCc---CHHHHHH
Confidence 999999998 9999988887777776655433 334566889999999999999999999 8888765
No 278
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.5e-38 Score=337.56 Aligned_cols=252 Identities=27% Similarity=0.445 Sum_probs=211.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk-----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
..+|++.++||+|+||.||+|+.. .++..+|+|.+.... ......+.+|+.++..++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 357999999999999999999753 356789999876532 344568899999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLG---------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH 727 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g---------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~ 727 (1003)
..|++|||+++++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||+++++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence 9999999999999999997653 4788999999999999999999999999999999999999999
Q ss_pred EEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechh
Q 001857 728 IKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVG 807 (1003)
Q Consensus 728 VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLG 807 (1003)
+||+|||+++...... .........+++.|+|||++.+..++.++||||||
T Consensus 161 ~kL~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 211 (280)
T cd05092 161 VKIGDFGMSRDIYSTD-----------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG 211 (280)
T ss_pred EEECCCCceeEcCCCc-----------------------------eeecCCCccccccccCHHHhccCCcCchhhHHHHH
Confidence 9999999987311000 00011234467889999999999999999999999
Q ss_pred HHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 808 IILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 808 VILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
|++|||++ |.+||......+....+..... +..+..+++.+.+||.+||+.||.+|| ++.+|++
T Consensus 212 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~P~~Rp---~~~~l~~ 276 (280)
T cd05092 212 VVLWEIFTYGKQPWYQLSNTEAIECITQGRE--LERPRTCPPEVYAIMQGCWQREPQQRM---VIKDIHS 276 (280)
T ss_pred HHHHHHHcCCCCCCccCCHHHHHHHHHcCcc--CCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 99999998 9999988777777766655432 234567899999999999999999999 8888764
No 279
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8e-39 Score=333.36 Aligned_cols=249 Identities=23% Similarity=0.383 Sum_probs=213.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
-.+|++++.||.|+||.||+|.+.. +..+|+|++.... ......+.+|+.+++.++||||+++++++.....+|+|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3579999999999999999999977 8999999987653 22345688899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 668 MEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|||+++++|.+++... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~---- 156 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE---- 156 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCC----
Confidence 9999999999999763 4689999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~ 824 (1003)
. ........+++.|+|||++.+..++.++|||||||++|+|++ |+.||...+
T Consensus 157 ~---------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~ 209 (261)
T cd05148 157 D---------------------------VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN 209 (261)
T ss_pred c---------------------------cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC
Confidence 0 000112346778999999998889999999999999999998 899999888
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..+++..+.... . +..+..+++.+.++|.+||+.||.+|| ++.+|++
T Consensus 210 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp---t~~~l~~ 256 (261)
T cd05148 210 NHEVYDQITAGY-R-MPCPAKCPQEIYKIMLECWAAEPEDRP---SFKALRE 256 (261)
T ss_pred HHHHHHHHHhCC-c-CCCCCCCCHHHHHHHHHHcCCCchhCc---CHHHHHH
Confidence 888887776542 2 234567899999999999999999999 8888765
No 280
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.8e-38 Score=340.97 Aligned_cols=254 Identities=27% Similarity=0.440 Sum_probs=215.5
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|...+.||+|+||+||+|++..++..||+|++.............+.+|+.+++.++|||++++++++.+....|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 77788899999999999999999999999998765544455567788999999999999999999999999999999999
Q ss_pred ccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 671 LNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 671 ~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
+. |+|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~---------- 171 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKS---------- 171 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCccc----------
Confidence 96 478877765 457899999999999999999999999999999999999999999999999987520
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
.......|+..|+|||++. +..++.++|||||||++|+|++|.+||...+..
T Consensus 172 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~ 226 (313)
T cd06633 172 -------------------------SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 226 (313)
T ss_pred -------------------------CCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 0012356889999999985 355788999999999999999999999887765
Q ss_pred hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 827 QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
.....+.....+. .....++..+++||.+||+++|.+|| ++.+++.||||...+
T Consensus 227 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~Rp---~~~~~l~~~~~~~~~ 280 (313)
T cd06633 227 SALYHIAQNDSPT-LQSNEWTDSFRGFVDYCLQKIPQERP---ASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCChhhCc---CHHHHhcCcccCCCc
Confidence 5555554433221 12345788999999999999999999 999999999998654
No 281
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-38 Score=340.76 Aligned_cols=255 Identities=24% Similarity=0.377 Sum_probs=211.6
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECC-------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRT-------TGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~-------tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~ 657 (1003)
...++|.+.+.||+|+||.||+|++.. ....||+|+++... .......+.+|+.+++.+ +||||++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 344679999999999999999998642 34579999987532 234456788999999999 69999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCccee
Q 001857 658 FTCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLL 721 (1003)
Q Consensus 658 f~d~~~lyLVmEy~~GGSL~d~L~~~----------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNIL 721 (1003)
+.....+|++|||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 99999999999999999999999653 24788889999999999999999999999999999999
Q ss_pred ecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccc
Q 001857 722 IAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTA 801 (1003)
Q Consensus 722 Ld~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kS 801 (1003)
++.++.+||+|||+++....... ........+++.|||||++.+..++.++
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 217 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDY-----------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQS 217 (314)
T ss_pred EcCCCcEEEcccccccccccccc-----------------------------ccccccCCCCccccCHHHHccCCcCccc
Confidence 99999999999999873110000 0001122345689999999998899999
Q ss_pred eeechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 802 DWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 802 DIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
|||||||++|+|++ |..||.+....+++..+..... +..+..++.++.+||.+||..+|.+|| ++.++++
T Consensus 218 DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp---s~~~ll~ 288 (314)
T cd05099 218 DVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR--MDKPSNCTHELYMLMRECWHAVPTQRP---TFKQLVE 288 (314)
T ss_pred hhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 99999999999999 8999998888888877765432 334567889999999999999999999 8888875
No 282
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.6e-38 Score=332.60 Aligned_cols=254 Identities=28% Similarity=0.442 Sum_probs=215.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~-----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
.++|++++.||.|+||+||+|+.+. +.+.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 3679999999999999999999754 34679999876532 2335577899999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeec
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLG---------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDF 733 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g---------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDF 733 (1003)
..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999999998665 6899999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001857 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 734 GLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYEL 813 (1003)
|+++..... .........+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 162 ~~~~~~~~~------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l 211 (275)
T cd05046 162 SLSKDVYNS------------------------------EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEV 211 (275)
T ss_pred ccccccCcc------------------------------cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHH
Confidence 998631100 00112234567889999999888889999999999999999
Q ss_pred Hh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 814 IV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 814 LT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
++ |..||...........+......++ .+..++..+.++|.+||+.+|.+|| ++.+++++
T Consensus 212 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~p~~Rp---~~~~~l~~ 272 (275)
T cd05046 212 FTQGELPFYGLSDEEVLNRLQAGKLELP-VPEGCPSRLYKLMTRCWAVNPKDRP---SFSELVSA 272 (275)
T ss_pred HhCCCCCccccchHHHHHHHHcCCcCCC-CCCCCCHHHHHHHHHHcCCCcccCC---CHHHHHHH
Confidence 98 8999988777777777765555443 3457899999999999999999999 99998865
No 283
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.3e-38 Score=341.44 Aligned_cols=254 Identities=28% Similarity=0.451 Sum_probs=217.2
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
..|+..+.||+|+||.||+|++..++..||+|++.+...........+.+|+.+++.++|||++++++++......|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34889999999999999999999999999999987654444555678889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+.| +|.+++.. ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.+||+|||++....
T Consensus 105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~------- 176 (317)
T cd06635 105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS------- 176 (317)
T ss_pred eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC-------
Confidence 99975 78777754 4668999999999999999999999999999999999999999999999999876310
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
......|++.|+|||++. +..++.++|||||||++|+|++|.+||...+
T Consensus 177 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 228 (317)
T cd06635 177 ----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 228 (317)
T ss_pred ----------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence 012346889999999984 3567899999999999999999999998877
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.......+....... .....+++.+.+||.+||+.+|.+|| ++.++++|+|+..
T Consensus 229 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~~il~~~~~~~ 282 (317)
T cd06635 229 AMSALYHIAQNESPT-LQSNEWSDYFRNFVDSCLQKIPQDRP---TSEELLKHMFVLR 282 (317)
T ss_pred HHHHHHHHHhccCCC-CCCccccHHHHHHHHHHccCCcccCc---CHHHHHhChhhhc
Confidence 666666665544322 22346789999999999999999999 9999999999864
No 284
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.7e-38 Score=328.90 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=204.7
Q ss_pred EEeeccCceEEEEEEECCCC---CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEec
Q 001857 595 KPISRGAFGRVFLAKKRTTG---DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYL 671 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tg---k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~ 671 (1003)
++||+|+||.||+|.+..++ ..||+|.+...... ...+.+.+|+.+++.++||||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999876554 78999998765432 34567889999999999999999999876 45689999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCC
Q 001857 672 NGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPA 751 (1003)
Q Consensus 672 ~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~ 751 (1003)
++|+|.+++...+.+++..+..++.||+.||+|||.+||+|+||||+|||++.++.+||+|||+++.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~------- 150 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD------- 150 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc-------
Confidence 9999999998888899999999999999999999999999999999999999999999999999873110000
Q ss_pred ccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhHHH
Q 001857 752 VSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFD 830 (1003)
Q Consensus 752 ~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~q 830 (1003)
.........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..++..
T Consensus 151 ---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~ 209 (257)
T cd05060 151 ---------------------YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIA 209 (257)
T ss_pred ---------------------ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence 0000112235578999999998889999999999999999998 999998888777766
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 831 kIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+..... ...+..++..+.++|.+||..+|.+|| ++.++++
T Consensus 210 ~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp---~~~~l~~ 250 (257)
T cd05060 210 MLESGER--LPRPEECPQEIYSIMLSCWKYRPEDRP---TFSELES 250 (257)
T ss_pred HHHcCCc--CCCCCCCCHHHHHHHHHHhcCChhhCc---CHHHHHH
Confidence 6654432 235567899999999999999999999 7777764
No 285
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.5e-38 Score=332.17 Aligned_cols=255 Identities=35% Similarity=0.604 Sum_probs=211.3
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceEEEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENLYLVM 668 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~lyLVm 668 (1003)
|++++.||.|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++... ..+|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 789999999999999999999999999999998754 2233446788899999999999999999999988 8999999
Q ss_pred EeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+++ +|.+++... ..+++..+..++.||+.||+|||+.|++|+||||+|||++.++.+||+|||++.......
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~---- 154 (287)
T cd07840 80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN---- 154 (287)
T ss_pred ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC----
Confidence 99975 899988765 579999999999999999999999999999999999999999999999999987411100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
........++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+..
T Consensus 155 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~ 208 (287)
T cd07840 155 --------------------------SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL 208 (287)
T ss_pred --------------------------cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 001122457889999998875 45789999999999999999999999887766
Q ss_pred hHHHhhhccCCC-----CCC----------------------CCCC-CCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCC
Q 001857 827 QIFDNILNRKIP-----WPR----------------------VPEE-MSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHV 878 (1003)
Q Consensus 827 ei~qkIl~~~~~-----~P~----------------------lp~~-iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHP 878 (1003)
.....+...... ++. .... ++..+.++|++||..+|.+|| ++.++++||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---~~~~~l~~~ 285 (287)
T cd07840 209 EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRI---SADQALQHE 285 (287)
T ss_pred HHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCc---CHHHHhhCc
Confidence 655554431110 000 0012 388999999999999999999 999999999
Q ss_pred CC
Q 001857 879 FF 880 (1003)
Q Consensus 879 FF 880 (1003)
||
T Consensus 286 ~~ 287 (287)
T cd07840 286 YF 287 (287)
T ss_pred CC
Confidence 98
No 286
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.1e-38 Score=358.26 Aligned_cols=259 Identities=24% Similarity=0.356 Sum_probs=209.8
Q ss_pred CCCcccCCeEEEEEeeccCceEEEEEEECCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEe
Q 001857 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKRTT-----GDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFY 656 (1003)
Q Consensus 583 k~~~~lddYeIlk~LG~G~FGtVyLArdk~t-----gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~ 656 (1003)
++....++|++.+.||+|+||.||+|.+... +..||||+++... .....+.+.+|+.+|..++ ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 4455567899999999999999999987433 3479999987542 2344567899999999996 999999999
Q ss_pred eeeccceEEEEEEeccCCChHHHHHhc-----------------------------------------------------
Q 001857 657 SFTCRENLYLVMEYLNGGDLYSLLRNL----------------------------------------------------- 683 (1003)
Q Consensus 657 ~f~d~~~lyLVmEy~~GGSL~d~L~~~----------------------------------------------------- 683 (1003)
++.....+|||||||++|+|.+++...
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 999999999999999999999988642
Q ss_pred -------------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcce
Q 001857 684 -------------------------------------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1003)
Q Consensus 684 -------------------------------------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1003)
..+++..+..++.||+.||+|||+.||+||||||+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 1367788889999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001857 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1003)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1003)
|++.++.+||+|||+++....... ........|++.|+|||++.+..++.+
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 319 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSN-----------------------------YVSKGSTFLPVKWMAPESIFDNLYTTL 319 (400)
T ss_pred EEeCCCEEEEEeCCcceecccccc-----------------------------ccccCCcCCCcceEChhhhcCCCCCch
Confidence 999999999999999874110000 011223467889999999999999999
Q ss_pred ceeechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 801 ADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 801 SDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+|||||||++|||++ |..||........+...+.....+ ..+..++.++.++|.+||+.||.+|| ++.+|.+
T Consensus 320 ~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RP---t~~~l~~ 392 (400)
T cd05105 320 SDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRM-AKPDHATQEVYDIMVKCWNSEPEKRP---SFLHLSD 392 (400)
T ss_pred hhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCC-CCCccCCHHHHHHHHHHCccCHhHCc---CHHHHHH
Confidence 999999999999997 999998765444433333333332 34567899999999999999999999 6666654
No 287
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.4e-38 Score=329.73 Aligned_cols=249 Identities=25% Similarity=0.434 Sum_probs=207.5
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
...++|++++.||+|+||.||+|.+. .+..+|+|.+...... .+.+.+|+.+++.++||||+++++.+. ....|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence 34578999999999999999999875 5667999998764332 246889999999999999999998875 45689
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
++|||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999999999999763 458999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+
T Consensus 157 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 206 (260)
T cd05070 157 ------------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred ------------------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 000112345678999999998889999999999999999999 9999998
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
.+..+....+.... . +..+...+..+.+||.+||.++|.+|| ++.++.
T Consensus 207 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~l~ 254 (260)
T cd05070 207 MNNREVLEQVERGY-R-MPCPQDCPISLHELMLQCWKKDPEERP---TFEYLQ 254 (260)
T ss_pred CCHHHHHHHHHcCC-C-CCCCCcCCHHHHHHHHHHcccCcccCc---CHHHHH
Confidence 88777777765432 2 234567899999999999999999999 777765
No 288
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=367.11 Aligned_cols=248 Identities=27% Similarity=0.456 Sum_probs=211.8
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
+.+..+.+++++.||+|-||.||+|.+.. ...||+|.++...+ ..+.+.+|+++|++|+|+|||++++++...+.
T Consensus 201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p 275 (468)
T KOG0197|consen 201 WEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP 275 (468)
T ss_pred eeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEecCCc
Confidence 33444568889999999999999999953 34799999986543 23567799999999999999999999999889
Q ss_pred EEEEEEeccCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 664 LYLVMEYLNGGDLYSLLRN--LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~--~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
+|||||||+.|+|.++|+. .+.+...+...++.|||.|++||+++++|||||...|||++++..+||+|||||+...
T Consensus 276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~- 354 (468)
T KOG0197|consen 276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIG- 354 (468)
T ss_pred eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccC-
Confidence 9999999999999999987 4579999999999999999999999999999999999999999999999999999311
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF 820 (1003)
.. .. ......--...|.|||.+....++.++|||||||+||||+| |+.||
T Consensus 355 -d~-----------------~Y-----------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py 405 (468)
T KOG0197|consen 355 -DD-----------------EY-----------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPY 405 (468)
T ss_pred -CC-----------------ce-----------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCC
Confidence 00 00 00111123457999999999999999999999999999998 99999
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~ 868 (1003)
.+.+..++.+.+..+. .+| .|..+|+++-+++..||..+|++||++
T Consensus 406 ~~msn~ev~~~le~Gy-Rlp-~P~~CP~~vY~lM~~CW~~~P~~RPtF 451 (468)
T KOG0197|consen 406 PGMSNEEVLELLERGY-RLP-RPEGCPDEVYELMKSCWHEDPEDRPTF 451 (468)
T ss_pred CCCCHHHHHHHHhccC-cCC-CCCCCCHHHHHHHHHHhhCCcccCCCH
Confidence 9999999998886654 455 478899999999999999999999943
No 289
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.6e-38 Score=347.21 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=209.0
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------ 661 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~------ 661 (1003)
.++|++++.||+|+||.||+|.+..+++.||+|++.+... .....+.+.+|+.++..++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 3679999999999999999999999999999999876432 223346678899999999999999999988643
Q ss_pred ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
..+|++++++ |++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~- 171 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD- 171 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc-
Confidence 3478899887 7799888765 469999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|++||
T Consensus 172 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf 218 (345)
T cd07877 172 ---------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 218 (345)
T ss_pred ---------------------------------ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 01123568899999999876 56889999999999999999999999
Q ss_pred CCCChhhHHHhhhccCC-----------------------C-----CCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 821 NAEHPQQIFDNILNRKI-----------------------P-----WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~-----------------------~-----~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
...+....+..+..... . +.......++++.+||.+||++||.+|| ++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~ 295 (345)
T cd07877 219 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---TAA 295 (345)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcC---CHH
Confidence 87665444433322110 0 0111124688899999999999999999 999
Q ss_pred HHHcCCCCCC
Q 001857 873 EVKQHVFFKD 882 (1003)
Q Consensus 873 ELLqHPFFk~ 882 (1003)
+++.||||+.
T Consensus 296 e~l~h~~f~~ 305 (345)
T cd07877 296 QALAHAYFAQ 305 (345)
T ss_pred HHhcChhhhh
Confidence 9999999985
No 290
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-38 Score=338.35 Aligned_cols=258 Identities=22% Similarity=0.368 Sum_probs=214.3
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEEC-------CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEE
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKR-------TTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFF 655 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk-------~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~ 655 (1003)
+....++|++.+.||+|+||.||+|++. ..+..||+|++.... .......+.+|+.++..+ +||||++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchhee
Confidence 3455678999999999999999999853 234579999886532 234457788999999999 899999999
Q ss_pred eeeeccceEEEEEEeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcc
Q 001857 656 YSFTCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDN 719 (1003)
Q Consensus 656 ~~f~d~~~lyLVmEy~~GGSL~d~L~~~----------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeN 719 (1003)
+.+.....+|+||||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 167 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence 9999999999999999999999999763 236778888999999999999999999999999999
Q ss_pred eeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCc
Q 001857 720 LLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGT 799 (1003)
Q Consensus 720 ILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ 799 (1003)
||++.++.+||+|||+++....... ........+++.|+|||++.+..++.
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 218 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDY-----------------------------YKKTTNGRLPVKWMAPEALFDRVYTH 218 (304)
T ss_pred EEEcCCCcEEECCCccceecccccc-----------------------------cccccCCCCCceeeCchhhccCCCCc
Confidence 9999999999999999874110000 00112245678899999999988999
Q ss_pred cceeechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 800 TADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 800 kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
++|||||||++|+|++ |..||.+.+..+++..+..... +..+..++.++.+||.+||..+|.+|| ++.++++.
T Consensus 219 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~e~l~~ 292 (304)
T cd05101 219 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTNELYMMMRDCWHAIPSHRP---TFKQLVED 292 (304)
T ss_pred hhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccChhhCC---CHHHHHHH
Confidence 9999999999999998 8999998888888877755432 234567899999999999999999999 89888875
No 291
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.5e-38 Score=343.57 Aligned_cols=274 Identities=28% Similarity=0.424 Sum_probs=215.2
Q ss_pred CCeEE-EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHH-----------HHHHHHHHHHHHHhcCCCcEEEEEe
Q 001857 589 DDFEI-IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKN-----------AVESILAERDILISVRNPFVVRFFY 656 (1003)
Q Consensus 589 ddYeI-lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~-----------~ie~~lrEi~IL~~L~HPNIVkL~~ 656 (1003)
++|.. .+.||.|+||+||+|.+..+++.||+|++......... ....+.+|+.++..++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45765 46799999999999999999999999998764332211 1124678999999999999999999
Q ss_pred eeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCc
Q 001857 657 SFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 657 ~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
++...+..|+||||+. |+|.+++.....+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccce
Confidence 9999999999999997 599999988888999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLT 815 (1003)
............ . ... ............+++.|+|||++.+. .++.++|||||||++|+|++
T Consensus 167 ~~~~~~~~~~~~----~-----~~~--------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t 229 (335)
T PTZ00024 167 RRYGYPPYSDTL----S-----KDE--------TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT 229 (335)
T ss_pred eecccccccccc----c-----ccc--------cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh
Confidence 742110000000 0 000 00001122335678999999999764 46899999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCCC-----CC--------------------CCCCCCCHHHHHHHHhhccCCcCCcCCCCC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIP-----WP--------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGG 870 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~-----~P--------------------~lp~~iS~elkDLIrrcL~kDP~kRPg~~T 870 (1003)
|.+||.+.+..+.+..+...... ++ ......+..+.+||.+||..+|.+|| +
T Consensus 230 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---s 306 (335)
T PTZ00024 230 GKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERI---S 306 (335)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhcc---C
Confidence 99999988776666555431100 00 01134578899999999999999999 9
Q ss_pred HHHHHcCCCCCCC
Q 001857 871 ASEVKQHVFFKDI 883 (1003)
Q Consensus 871 AeELLqHPFFk~I 883 (1003)
+++++.||||+..
T Consensus 307 ~~~~l~~~~~~~~ 319 (335)
T PTZ00024 307 AKEALKHEYFKSD 319 (335)
T ss_pred HHHHhcCcccCCC
Confidence 9999999999853
No 292
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.8e-38 Score=340.09 Aligned_cols=258 Identities=24% Similarity=0.368 Sum_probs=213.0
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEE-----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKK-----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArd-----k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~ 657 (1003)
+....++|++.+.||+|+||.||+|.+ ..++..||+|+++... .....+.+.+|+.+++++ +||||+++++.
T Consensus 30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 345557899999999999999999985 2355689999987542 233456788999999999 79999999999
Q ss_pred eeccceEEEEEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCC
Q 001857 658 FTCRENLYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 658 f~d~~~lyLVmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
+...+.+|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+|+||||+|||++.++.++|+|||+
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999999997543 389999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT 815 (1003)
++....... ........+++.|+|||++.+..++.++|||||||++|+|++
T Consensus 188 ~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t 238 (302)
T cd05055 188 ARDIMNDSN-----------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238 (302)
T ss_pred cccccCCCc-----------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHh
Confidence 873110000 001123456789999999999889999999999999999998
Q ss_pred -CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 816 -GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 816 -Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
|.+||........+......... +..+...++++.+||.+||.++|.+|| ++.++++
T Consensus 239 ~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ell~ 296 (302)
T cd05055 239 LGSNPYPGMPVDSKFYKLIKEGYR-MAQPEHAPAEIYDIMKTCWDADPLKRP---TFKQIVQ 296 (302)
T ss_pred CCCCCcCCCCchHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCchhCc---CHHHHHH
Confidence 99999877766555555444332 234456789999999999999999999 8888875
No 293
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.5e-38 Score=328.14 Aligned_cols=249 Identities=24% Similarity=0.414 Sum_probs=207.7
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.-++|+++++||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++.++||||+++++.+. .+.+|+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEE
Confidence 3467999999999999999999864 578899999876442 2356788999999999999999998764 567899
Q ss_pred EEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
+|||+.+++|.+++... ..++...+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++.......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 156 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE- 156 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC-
Confidence 99999999999998754 368999999999999999999999999999999999999999999999999987311000
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~ 823 (1003)
........++..|+|||++.+..++.++|||||||++|||++ |++||.+.
T Consensus 157 -----------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 207 (260)
T cd05067 157 -----------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGM 207 (260)
T ss_pred -----------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 000112346778999999998889999999999999999998 99999988
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+..+....+.... . +..+..++.++.++|.+||..+|.+|| +++++++
T Consensus 208 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 255 (260)
T cd05067 208 TNPEVIQNLERGY-R-MPRPDNCPEELYELMRLCWKEKPEERP---TFEYLRS 255 (260)
T ss_pred ChHHHHHHHHcCC-C-CCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 7777766654432 2 234567889999999999999999999 8887764
No 294
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.6e-38 Score=330.51 Aligned_cols=244 Identities=26% Similarity=0.390 Sum_probs=200.1
Q ss_pred EeeccCceEEEEEEEC--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 596 PISRGAFGRVFLAKKR--TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk--~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.++||||+++++++.. ...|+||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 3899999999999775 445679999986542 24445678999999999999999999998764 578999999999
Q ss_pred CChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001857 674 GDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1003)
Q Consensus 674 GSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~ 752 (1003)
++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~-------- 150 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS-------- 150 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCcc--------
Confidence 999999975 45799999999999999999999999999999999999999999999999999873110000
Q ss_pred cCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhHHHh
Q 001857 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDN 831 (1003)
Q Consensus 753 s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qk 831 (1003)
.........+++.|+|||++.+..++.++|||||||++|+|++ |..||...........
T Consensus 151 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 210 (257)
T cd05115 151 --------------------YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSF 210 (257)
T ss_pred --------------------ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH
Confidence 0000112234678999999998889999999999999999996 9999998887777666
Q ss_pred hhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 832 ILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 832 Il~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
+..+.. +..+..+++++.++|.+||..+|.+|| ++.+|+
T Consensus 211 ~~~~~~--~~~~~~~~~~l~~li~~c~~~~~~~Rp---~~~~i~ 249 (257)
T cd05115 211 IEQGKR--LDCPAECPPEMYALMKDCWIYKWEDRP---NFAKVE 249 (257)
T ss_pred HHCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHH
Confidence 655432 345677899999999999999999999 555554
No 295
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.6e-38 Score=329.15 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=211.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD---LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk---~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
..+|++.+.||+|+||.||+|+++.+++ .||||++.+.. .......+.+|+.+++.++||||+++++++.....+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4679999999999999999999887665 69999987542 344557889999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|+||||+++++|.+++... +.+++..++.++.|++.||.|||++|++|+||||+|||++.++.+||+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD- 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC-
Confidence 9999999999999999764 56899999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
.. . +. ........++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 160 ~~---~-------------~~---------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~ 214 (269)
T cd05065 160 TS---D-------------PT---------YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 214 (269)
T ss_pred cc---c-------------cc---------cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCC
Confidence 00 0 00 000011123567999999999899999999999999999886 9999988
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+.......+... ...+ .+..++..+.+++.+||+.+|.+|| ++.++++
T Consensus 215 ~~~~~~~~~i~~~-~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 263 (269)
T cd05065 215 MSNQDVINAIEQD-YRLP-PPMDCPTALHQLMLDCWQKDRNARP---KFGQIVS 263 (269)
T ss_pred CCHHHHHHHHHcC-CcCC-CcccCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 8877777776433 2223 3457889999999999999999999 8888875
No 296
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.7e-38 Score=336.85 Aligned_cols=259 Identities=32% Similarity=0.505 Sum_probs=209.7
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc----
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE---- 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~---- 662 (1003)
..++|++.+.||+|+||.||+|.++.+|+.||+|+++.... .......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45789999999999999999999999999999999875432 2223356678999999999999999999887655
Q ss_pred ------eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCC
Q 001857 663 ------NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 663 ------~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
.+|+||||+++ +|...+... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 79999999986 777777654 4699999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHH
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELI 814 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELL 814 (1003)
+........ .......+++.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 163 ~~~~~~~~~------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~ 212 (302)
T cd07864 163 ARLYNSEES------------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 212 (302)
T ss_pred cccccCCcc------------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHH
Confidence 874110000 00112356788999999875 45789999999999999999
Q ss_pred hCCCCCCCCChhhHHHhhhccCCC-----CCC----------------------CCCCCCHHHHHHHHhhccCCcCCcCC
Q 001857 815 VGIPPFNAEHPQQIFDNILNRKIP-----WPR----------------------VPEEMSPEAHDLIDRFLTEDPHQRLG 867 (1003)
Q Consensus 815 TGk~PF~~~~~~ei~qkIl~~~~~-----~P~----------------------lp~~iS~elkDLIrrcL~kDP~kRPg 867 (1003)
+|++||...+.......+...... +|. ....++..+.+||.+||..||.+||
T Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp- 291 (302)
T cd07864 213 TKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRC- 291 (302)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCC-
Confidence 999999877665554444331100 000 1124689999999999999999999
Q ss_pred CCCHHHHHcCCCC
Q 001857 868 SGGASEVKQHVFF 880 (1003)
Q Consensus 868 ~~TAeELLqHPFF 880 (1003)
++.+++.||||
T Consensus 292 --~~~~il~~~~~ 302 (302)
T cd07864 292 --TAEEALNSPWL 302 (302)
T ss_pred --CHHHHhcCCCC
Confidence 99999999997
No 297
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.8e-38 Score=330.42 Aligned_cols=254 Identities=24% Similarity=0.370 Sum_probs=210.4
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD---LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk---~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
..+|++.+.||+|+||.||+|+++.++. .+|+|.++... .......+.+|+.++..++||||+++++++...+.+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 3579999999999999999999865443 79999886542 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|+||||++|++|.+++... +.++...+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~- 159 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD- 159 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc-
Confidence 9999999999999999765 56899999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
.. .........++..|+|||++.+..++.++|+|||||++|++++ |..||..
T Consensus 160 ~~---------------------------~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~ 212 (267)
T cd05066 160 PE---------------------------AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE 212 (267)
T ss_pred cc---------------------------eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCccc
Confidence 00 0000112334678999999998889999999999999999886 9999988
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
....+....+.... ..+ .+..+++.+.+++.+||+++|.+|| ++.++++
T Consensus 213 ~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 261 (267)
T cd05066 213 MSNQDVIKAIEEGY-RLP-APMDCPAALHQLMLDCWQKDRNERP---KFEQIVS 261 (267)
T ss_pred CCHHHHHHHHhCCC-cCC-CCCCCCHHHHHHHHHHcccCchhCC---CHHHHHH
Confidence 77777777665542 222 3456889999999999999999999 7777764
No 298
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.8e-38 Score=348.93 Aligned_cols=255 Identities=30% Similarity=0.482 Sum_probs=213.3
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce----
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN---- 663 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~---- 663 (1003)
.++|++.+.||.|+||.||+|++..++..||+|++..... .......+.+|+.+++.++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4679999999999999999999999999999999875432 23344667889999999999999999988876554
Q ss_pred --EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 664 --LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 664 --lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
+|+|+||+ |++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~- 169 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD- 169 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc-
Confidence 89999999 6699999876 579999999999999999999999999999999999999999999999999987310
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
.......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus 170 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf 216 (343)
T cd07851 170 ---------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF 216 (343)
T ss_pred ---------------------------------ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 00123568889999999875 46789999999999999999999999
Q ss_pred CCCChhhHHHhhhccCCC----------------------------CCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 821 NAEHPQQIFDNILNRKIP----------------------------WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~----------------------------~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
.+.+....+..+...... +......+++.+.+||.+||..||.+|| ++.
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp---t~~ 293 (343)
T cd07851 217 PGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI---TAA 293 (343)
T ss_pred CCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC---CHH
Confidence 887766665555432110 0111234689999999999999999999 999
Q ss_pred HHHcCCCCCC
Q 001857 873 EVKQHVFFKD 882 (1003)
Q Consensus 873 ELLqHPFFk~ 882 (1003)
+|++||||..
T Consensus 294 ell~h~~~~~ 303 (343)
T cd07851 294 EALAHPYLAE 303 (343)
T ss_pred HHhcCCCccc
Confidence 9999999984
No 299
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.8e-38 Score=327.80 Aligned_cols=254 Identities=23% Similarity=0.345 Sum_probs=211.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD---LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk---~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
.++|+..+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.++..++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 3579999999999999999999876655 79999886542 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|+||||+++++|.+++... +.+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999999999999764 678999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
. ..........++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 162 ~----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~ 213 (268)
T cd05063 162 E----------------------------GTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD 213 (268)
T ss_pred c----------------------------cceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence 0 0000111233567999999998889999999999999999997 9999988
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+..+....+.... ..| .+..++.++.+|+.+||+.+|.+|| ++.++++
T Consensus 214 ~~~~~~~~~i~~~~-~~~-~~~~~~~~~~~li~~c~~~~p~~Rp---~~~~i~~ 262 (268)
T cd05063 214 MSNHEVMKAINDGF-RLP-APMDCPSAVYQLMLQCWQQDRARRP---RFVDIVN 262 (268)
T ss_pred CCHHHHHHHHhcCC-CCC-CCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 88777777776542 222 3456889999999999999999999 7888765
No 300
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=364.19 Aligned_cols=261 Identities=35% Similarity=0.619 Sum_probs=226.7
Q ss_pred eEEE--EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 591 FEII--KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 591 YeIl--k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
|++. ++||.|.||+||-|+++.+|+.||||+|.|.+...+ +...+.+|+.||+.++||.||.+...|++.+.++.||
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM 642 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM 642 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence 6664 789999999999999999999999999998775444 4488999999999999999999999999999999999
Q ss_pred EeccCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC---CcEEEeecCCccccccCC
Q 001857 669 EYLNGGDLYSLLR--NLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD---GHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 669 Ey~~GGSL~d~L~--~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d---G~VKLiDFGLAk~~~~~~ 743 (1003)
|-+.| ++.+.|- ..+++++...++++.||+.||.|||-+||+|+||||+|||+... -++||||||+|++.-
T Consensus 643 EKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg--- 718 (888)
T KOG4236|consen 643 EKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG--- 718 (888)
T ss_pred hhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecc---
Confidence 99965 7777663 45899999999999999999999999999999999999999764 379999999999521
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
...-.++.+|||.|+|||++++++|+..-|+||+|||+|--|.|..||...
T Consensus 719 -----------------------------EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 719 -----------------------------EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred -----------------------------hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 112346789999999999999999999999999999999999999999643
Q ss_pred ChhhHHHhhhccCCCCCC-CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC-ChhHHhh
Q 001857 824 HPQQIFDNILNRKIPWPR-VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI-NWDTLAR 890 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~-lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I-dwd~L~~ 890 (1003)
+++-.+|.+..+-+|. -+.++++++.|||..+|+..-.+|. +++..+.|||+++. .|-.++.
T Consensus 770 --EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRy---svdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 770 --EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRY---SVDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred --cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhc---chHhhccchhhhcchHHHHHHH
Confidence 4566677776665553 3568999999999999999999999 99999999999975 3666654
No 301
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.3e-38 Score=330.39 Aligned_cols=254 Identities=28% Similarity=0.499 Sum_probs=214.5
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI--RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~--~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+|.+.+.||+|+||.||+|.+..++..+++|+++..... .......+.+|..+++.++||||+++++.+.+....|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 489999999999999999999888888888887653321 222334567899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 668 MEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|||+++++|.+++.. ...+++..++.++.|++.||.|||++||+|+||||+||+++. +.++|+|||+++.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~- 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS- 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-
Confidence 999999999998864 356899999999999999999999999999999999999975 67999999998741100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...
T Consensus 159 ------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~ 208 (260)
T cd08222 159 ------------------------------CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ 208 (260)
T ss_pred ------------------------------cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 00122356889999999998888999999999999999999999999877
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
........+.... .+..+..++.++.++|.+||..+|.+|| ++.++++||||
T Consensus 209 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~il~~~~~ 260 (260)
T cd08222 209 NFLSVVLRIVEGP--TPSLPETYSRQLNSIMQSMLNKDPSLRP---SAAEILRNPFI 260 (260)
T ss_pred cHHHHHHHHHcCC--CCCCcchhcHHHHHHHHHHhcCChhhCc---CHHHHhhCCCC
Confidence 7766666665433 3455678899999999999999999999 99999999997
No 302
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.9e-38 Score=382.40 Aligned_cols=273 Identities=26% Similarity=0.411 Sum_probs=210.0
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
+++|+++++||+|+||.||+|++..+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 36899999999999999999999999999999999765433444567889999999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCc
Q 001857 668 MEYLNGGDLYSLLRNL-----------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-----------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
|||++||+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999998642 23455677889999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG 816 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTG 816 (1003)
+...... +.......... +. ...........+||+.|||||++.+..++.++|||||||++|||++|
T Consensus 161 k~i~~~~-~~~~~l~~~~~---~s---------~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG 227 (932)
T PRK13184 161 IFKKLEE-EDLLDIDVDER---NI---------CYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTL 227 (932)
T ss_pred eeccccc-ccccccccccc---cc---------cccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHC
Confidence 8421100 00000000000 00 00001122346899999999999999999999999999999999999
Q ss_pred CCCCCCCChhhHHHhh-hccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 817 IPPFNAEHPQQIFDNI-LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 817 k~PF~~~~~~ei~qkI-l~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..||.......+.... ......+. ....+++.+.+++.+||+.||.+|++ +++++++
T Consensus 228 ~~PF~~~~~~ki~~~~~i~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~s--s~eeLl~ 285 (932)
T PRK13184 228 SFPYRRKKGRKISYRDVILSPIEVA-PYREIPPFLSQIAMKALAVDPAERYS--SVQELKQ 285 (932)
T ss_pred CCCCCCcchhhhhhhhhccChhhcc-ccccCCHHHHHHHHHHccCChhhCcC--HHHHHHH
Confidence 9999876544332221 11111111 12468899999999999999999994 4444443
No 303
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.7e-38 Score=334.00 Aligned_cols=253 Identities=23% Similarity=0.407 Sum_probs=211.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~-----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
.++|++.+.||.|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 4679999999999999999999753 67899999987542 2334467889999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcce
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLG----------------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g----------------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1003)
.+|+||||+++|+|.+++.... .+++..+..++.||+.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 9999999999999999997432 367888899999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001857 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1003)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1003)
|++.++.++|+|||++........ ........+++.|+|||++.+..++.+
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 212 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADY-----------------------------YKASENDAIPIRWMPPESIFYNRYTTE 212 (288)
T ss_pred EecCCCceEECccccceecccCcc-----------------------------ccccCCCccChhhcCHHHHhcCCCCch
Confidence 999999999999999863110000 000112334667999999999899999
Q ss_pred ceeechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 801 ADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 801 SDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+|||||||++|||++ |..||.+.+..+....+..... +..+..++.++.+||.+||+.+|.+|| ++.|+++
T Consensus 213 ~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp---t~~el~~ 284 (288)
T cd05050 213 SDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNV--LSCPDNCPLELYNLMRLCWSKLPSDRP---SFASINR 284 (288)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcccCcccCC---CHHHHHH
Confidence 999999999999997 8899988888887777765543 234567899999999999999999999 8888764
No 304
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.2e-38 Score=333.95 Aligned_cols=251 Identities=25% Similarity=0.435 Sum_probs=208.1
Q ss_pred CeEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~-----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
+|++.+.||+|+||.||+|.+.. ....+|+|++.... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 48899999999999999998753 23579999886543 233456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcce
Q 001857 665 YLVMEYLNGGDLYSLLRNL------------------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~------------------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1003)
|++|||+.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999998642 2477889999999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001857 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1003)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1003)
|+++++.+||+|||+++...... .........++..|+|||++.+..++.+
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~ 209 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEED-----------------------------SYVKRSKGRIPVKWMAIESLFDHIYTTQ 209 (290)
T ss_pred EEcCCCcEEeccccccccccCcc-----------------------------chhcccCCCCCccccCHHHHccCCcchH
Confidence 99999999999999987311000 0001122356778999999998889999
Q ss_pred ceeechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 801 ADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 801 SDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+|||||||++|||++ |..||.+..+..+.+.+... .. +..+..++.++.+||.+||+.+|.+|| ++.++++
T Consensus 210 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~i~~cl~~~P~~Rp---~~~~i~~ 281 (290)
T cd05045 210 SDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG-YR-MERPENCSEEMYNLMLTCWKQEPDKRP---TFADISK 281 (290)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CC-CCCCCCCCHHHHHHHHHHccCCcccCC---CHHHHHH
Confidence 999999999999998 99999988887777665433 22 234567899999999999999999999 7877764
No 305
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.1e-38 Score=329.92 Aligned_cols=248 Identities=25% Similarity=0.424 Sum_probs=205.7
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++.++||+|+||.||+|++..+ ..||+|++++... ..+.+.+|+.+++.++||||+++++.+. ....|+|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIV 78 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEE
Confidence 46799999999999999999998655 4699999876432 1246788999999999999999998875 4568999
Q ss_pred EEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 668 MEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++..... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~--~ 156 (262)
T cd05071 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN--E 156 (262)
T ss_pred EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccc--c
Confidence 9999999999999764 35889999999999999999999999999999999999999999999999998731100 0
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~ 824 (1003)
........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+..
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~ 208 (262)
T cd05071 157 ----------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 208 (262)
T ss_pred ----------------------------cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 000112346778999999998889999999999999999999 899998888
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..++...+.... .. ..+..++..+.+||.+||++||.+|| ++.++++
T Consensus 209 ~~~~~~~~~~~~-~~-~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~~~~ 255 (262)
T cd05071 209 NREVLDQVERGY-RM-PCPPECPESLHDLMCQCWRKEPEERP---TFEYLQA 255 (262)
T ss_pred hHHHHHHHhcCC-CC-CCccccCHHHHHHHHHHccCCcccCC---CHHHHHH
Confidence 777777665432 22 23456889999999999999999999 7777654
No 306
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.2e-38 Score=345.85 Aligned_cols=259 Identities=29% Similarity=0.477 Sum_probs=208.1
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-------
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------- 661 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~------- 661 (1003)
.+|++.+.||.|+||.||+|.+..+|+.||+|++..... ...+.+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 579999999999999999999999999999999866432 3456788999999999999999999776653
Q ss_pred -------ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-CCcEEEeec
Q 001857 662 -------ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDF 733 (1003)
Q Consensus 662 -------~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDF 733 (1003)
..+|+||||+. ++|.+++.. +.+++..++.++.||+.||+|||++||+||||||+||+++. ++.+||+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 35899999997 589888864 56899999999999999999999999999999999999975 567899999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHH
Q 001857 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 734 GLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYE 812 (1003)
|+++.... ... .........||..|+|||++.+ ..++.++|||||||++|+
T Consensus 160 g~~~~~~~--~~~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~e 211 (342)
T cd07854 160 GLARIVDP--HYS--------------------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 211 (342)
T ss_pred ccceecCC--ccc--------------------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHH
Confidence 99873100 000 0001122468899999998764 567899999999999999
Q ss_pred HHhCCCCCCCCChhhHHHhhhccC---------------------------CCCCCCCCCCCHHHHHHHHhhccCCcCCc
Q 001857 813 LIVGIPPFNAEHPQQIFDNILNRK---------------------------IPWPRVPEEMSPEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 813 LLTGk~PF~~~~~~ei~qkIl~~~---------------------------~~~P~lp~~iS~elkDLIrrcL~kDP~kR 865 (1003)
|++|..||...+.......+.... .++......++.++.+||.+||+.||.+|
T Consensus 212 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 291 (342)
T cd07854 212 MLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDR 291 (342)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhc
Confidence 999999998776555444433211 00001123578899999999999999999
Q ss_pred CCCCCHHHHHcCCCCCCC
Q 001857 866 LGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 866 Pg~~TAeELLqHPFFk~I 883 (1003)
| ++.++++||||+.+
T Consensus 292 ~---t~~ell~h~~~~~~ 306 (342)
T cd07854 292 L---TAEEALMHPYMSCY 306 (342)
T ss_pred c---CHHHHhCCCccccc
Confidence 9 99999999999854
No 307
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=9.4e-38 Score=329.29 Aligned_cols=242 Identities=26% Similarity=0.408 Sum_probs=202.0
Q ss_pred EeeccCceEEEEEEECCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEEEecc
Q 001857 596 PISRGAFGRVFLAKKRTTGD--LFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYLN 672 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~tgk--~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVmEy~~ 672 (1003)
.||+|+||.||+|++..++. .+|+|.++.. ........+.+|+.++..+ +||||+++++++.....+|+||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999999988776 4688877642 2334456788999999999 89999999999999999999999999
Q ss_pred CCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCc
Q 001857 673 GGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 673 GGSL~d~L~~~g----------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
+|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 999999997543 4788999999999999999999999999999999999999999999999997
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV- 815 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT- 815 (1003)
..... ........+++.|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~--------------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~ 207 (270)
T cd05047 160 RGQEV--------------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 207 (270)
T ss_pred cccch--------------------------------hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcC
Confidence 62000 000112234667999999998889999999999999999997
Q ss_pred CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
|..||.+.+..+.++.+..... +..+..++.++.+||.+||..||.+|| ++.++++
T Consensus 208 g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~ 263 (270)
T cd05047 208 GGTPYCGMTCAELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERP---SFAQILV 263 (270)
T ss_pred CCCCccccCHHHHHHHHhCCCC--CCCCCcCCHHHHHHHHHHcccChhhCC---CHHHHHH
Confidence 9999988877777776654321 234556889999999999999999999 8888875
No 308
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.7e-38 Score=331.85 Aligned_cols=254 Identities=33% Similarity=0.581 Sum_probs=211.6
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|++.+.||.|++|.||+|.+..+++.+|+|.+..... .......+.+|+.+++.++||||+++++.+.+...+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999998999999999876543 223446788899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 671 LNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 671 ~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
+++ +|.+++... +.+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~------ 152 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV------ 152 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc------
Confidence 975 888888664 679999999999999999999999999999999999999999999999999987311000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
.......++..|+|||.+.+. .++.++|+|||||++|+|++|++||...+..+.
T Consensus 153 -------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~ 207 (283)
T cd05118 153 -------------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ 207 (283)
T ss_pred -------------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011234678899999999876 789999999999999999999999988776555
Q ss_pred HHhhhccCC-------------------CC--------CCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 829 FDNILNRKI-------------------PW--------PRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 829 ~qkIl~~~~-------------------~~--------P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+..+..... .+ ......++.++.+||.+||.+||.+|| ++.++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---~~~~ll~~~~~ 283 (283)
T cd05118 208 LFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRI---TAEQALAHPYF 283 (283)
T ss_pred HHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCc---CHHHHhhCCCC
Confidence 444432110 00 011234688999999999999999999 99999999997
No 309
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.2e-38 Score=322.59 Aligned_cols=249 Identities=29% Similarity=0.459 Sum_probs=212.9
Q ss_pred eEEEEEeeccCceEEEEEEECCCC----CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTG----DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tg----k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
+++.+.||.|+||.||+|++...+ ..||+|++..... ......+..|+.++..++||||+++++.+.+.+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 457789999999999999998766 8999999865432 2255788899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGC--LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~--L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
+|||+++++|.+++..... +++..+..++.||+.||+|||+.||+|+||||+||+++.++.++|+|||+++.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD-- 156 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccc--
Confidence 9999999999999976544 999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~ 823 (1003)
. ........+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...
T Consensus 157 ~----------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~ 208 (258)
T smart00219 157 D----------------------------YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM 208 (258)
T ss_pred c----------------------------ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 0 000001237889999999988889999999999999999998 89999988
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+...+.+.+..... +..+..++.++.+++.+||..||.+|| ++.++++
T Consensus 209 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp---t~~~ll~ 256 (258)
T smart00219 209 SNEEVLEYLKKGYR--LPKPENCPPEIYKLMLQCWAEDPEDRP---TFSELVE 256 (258)
T ss_pred CHHHHHHHHhcCCC--CCCCCcCCHHHHHHHHHHCcCChhhCc---CHHHHHh
Confidence 88888877766543 334566899999999999999999999 8999875
No 310
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.5e-38 Score=336.36 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=206.6
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCC--------------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTG--------------DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRF 654 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tg--------------k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL 654 (1003)
.+|++.+.||+|+||.||+|++..++ ..||+|++.... .......+.+|++++..++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 57999999999999999999875432 358999987532 23445678899999999999999999
Q ss_pred EeeeeccceEEEEEEeccCCChHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceee
Q 001857 655 FYSFTCRENLYLVMEYLNGGDLYSLLRNLG------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI 722 (1003)
Q Consensus 655 ~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL 722 (1003)
++++......|+||||+++++|.+++.... .+++..+..++.||+.||.|||++|++||||||+|||+
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 999999999999999999999999986532 36788889999999999999999999999999999999
Q ss_pred cCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccce
Q 001857 723 AHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTAD 802 (1003)
Q Consensus 723 d~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSD 802 (1003)
+.++.+||+|||++....... .........+++.|+|||++.+..++.++|
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 213 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGD-----------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASD 213 (295)
T ss_pred cCCCcEEecccccccccccCc-----------------------------ceeccCcCcCceeecChhhhccCCcCchhh
Confidence 999999999999987311000 000112345678999999999888999999
Q ss_pred eechhHHHHHHHh--CCCCCCCCChhhHHHhhhc-----cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 803 WWSVGIILFELIV--GIPPFNAEHPQQIFDNILN-----RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 803 IWSLGVILYELLT--Gk~PF~~~~~~ei~qkIl~-----~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
||||||++|+|++ |..||...+..+....+.. ....+...+..+++.+.+||.+||+.||.+|| ++.+|+
T Consensus 214 vwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RP---s~~~i~ 290 (295)
T cd05097 214 VWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRP---TFNKIH 290 (295)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCc---CHHHHH
Confidence 9999999999988 7789988776666554432 11112233456789999999999999999999 888876
Q ss_pred c
Q 001857 876 Q 876 (1003)
Q Consensus 876 q 876 (1003)
+
T Consensus 291 ~ 291 (295)
T cd05097 291 H 291 (295)
T ss_pred H
Confidence 4
No 311
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=5.3e-38 Score=342.83 Aligned_cols=260 Identities=30% Similarity=0.454 Sum_probs=209.0
Q ss_pred CeEEEEEeeccCceEEEEEEECCC--CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec----cc
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTT--GDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTC----RE 662 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~t--gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d----~~ 662 (1003)
+|++.+.||+|+||.||+|++..+ +..||+|++.... ........+.+|+.+++.+ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 489999999999999999999888 8999999986432 2223346678899999998 59999999986432 24
Q ss_pred eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
.+|++|||+. ++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 6889999985 699999988888999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
.. ..........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.
T Consensus 159 ~~---------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 159 PG---------------------------ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred cc---------------------------cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 00 00011234679999999998876 568999999999999999999999998
Q ss_pred CCChhhHHHhhhccC----------------------------CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHH
Q 001857 822 AEHPQQIFDNILNRK----------------------------IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~----------------------------~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeE 873 (1003)
..+....+..++... ..++.....++..+.+||.+||+.||.+|| ++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---t~~~ 288 (332)
T cd07857 212 GKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRI---SVEE 288 (332)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCC---CHHH
Confidence 766544443332210 111112234688999999999999999999 9999
Q ss_pred HHcCCCCC
Q 001857 874 VKQHVFFK 881 (1003)
Q Consensus 874 LLqHPFFk 881 (1003)
++.||||.
T Consensus 289 ll~~~~~~ 296 (332)
T cd07857 289 ALEHPYLA 296 (332)
T ss_pred HhcChhhh
Confidence 99999996
No 312
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.4e-37 Score=324.11 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=211.2
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
...++|++.+.||.|+||.||+|.+. .++.||||.+..... ..+.+.+|+.+++.++||||+++++.+.....+|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 34578999999999999999999975 557899999875432 2356788999999999999999999999989999
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+||||+++++|.+++... ..++...+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||+++.....
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~- 156 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD- 156 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch-
Confidence 999999999999999765 36899999999999999999999999999999999999999999999999998731000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
.........++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+
T Consensus 157 -----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 207 (261)
T cd05034 157 -----------------------------EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPG 207 (261)
T ss_pred -----------------------------hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 0001112335678999999998889999999999999999998 9999998
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+.....+.+.... . ...+...+.++.+++.+||+.+|.+|| +++++++
T Consensus 208 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~l~~ 256 (261)
T cd05034 208 MTNREVLEQVERGY-R-MPRPPNCPEELYDLMLQCWDKDPEERP---TFEYLQS 256 (261)
T ss_pred CCHHHHHHHHHcCC-C-CCCCCCCCHHHHHHHHHHcccCcccCC---CHHHHHH
Confidence 88777777776542 2 223456789999999999999999999 7877763
No 313
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3e-38 Score=339.83 Aligned_cols=254 Identities=31% Similarity=0.557 Sum_probs=214.0
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|....+||+|+||.||++..+.++..||+|++.... ......+.+|+.+++.++||||+++++.+...++.|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 444567999999999999999999999999875422 23456788999999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCC
Q 001857 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGP 750 (1003)
Q Consensus 671 ~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p 750 (1003)
+++++|.+++.. +.+++..++.++.||+.||+|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~-------- 169 (292)
T cd06657 99 LEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------- 169 (292)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc--------
Confidence 999999998754 56899999999999999999999999999999999999999999999999987631000
Q ss_pred CccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHH
Q 001857 751 AVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFD 830 (1003)
Q Consensus 751 ~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~q 830 (1003)
........||+.|+|||++.+..++.++|+|||||++|+|++|.+||.+........
T Consensus 170 -----------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~ 226 (292)
T cd06657 170 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 226 (292)
T ss_pred -----------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 001223568999999999988888999999999999999999999998877666555
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 831 NILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 831 kIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.+.............++..+.++|.+||..+|.+|| ++.++++||||..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~---~~~~ll~~~~~~~ 275 (292)
T cd06657 227 MIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRA---TAAELLKHPFLAK 275 (292)
T ss_pred HHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCc---CHHHHhcChHHhc
Confidence 544332221122345789999999999999999999 9999999999974
No 314
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1e-37 Score=341.80 Aligned_cols=255 Identities=31% Similarity=0.517 Sum_probs=208.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-cceEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-RENLYL 666 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d-~~~lyL 666 (1003)
.++|++++.||.|+||.||+|.+..+++.||+|++.+... .....+.+.+|+.++..++||||++++++|.. ...+|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 4679999999999999999999999999999998865432 22344677889999999999999999999876 567999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
+|||+ +++|..++.. ..+++..+..++.||+.||.|||++||+||||||.|||++.++.++|+|||++....
T Consensus 88 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~------ 159 (328)
T cd07856 88 VTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD------ 159 (328)
T ss_pred Eeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC------
Confidence 99998 5689888764 568899999999999999999999999999999999999999999999999986310
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.......|++.|+|||++.+ ..++.++|||||||++|+|++|++||.....
T Consensus 160 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~ 211 (328)
T cd07856 160 ----------------------------PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH 211 (328)
T ss_pred ----------------------------CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 00123467889999999876 5689999999999999999999999987654
Q ss_pred hhHHHhhhcc----------------------------CCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 826 QQIFDNILNR----------------------------KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 826 ~ei~qkIl~~----------------------------~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
...+..+.+. ..+.......++..+.++|++||+.+|.+|| ++++++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~---t~~ell~~ 288 (328)
T cd07856 212 VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRI---SAAEALAH 288 (328)
T ss_pred HHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCC---CHHHHhcC
Confidence 3322211110 0001111235788999999999999999999 99999999
Q ss_pred CCCCC
Q 001857 878 VFFKD 882 (1003)
Q Consensus 878 PFFk~ 882 (1003)
|||..
T Consensus 289 ~~~~~ 293 (328)
T cd07856 289 PYLAP 293 (328)
T ss_pred Ccccc
Confidence 99973
No 315
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=8.4e-38 Score=334.46 Aligned_cols=260 Identities=30% Similarity=0.525 Sum_probs=210.2
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccce
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~ 663 (1003)
....++|++.+.||.|+||.||+|.+..+++.||||++++... ......+..|..++..+ .||||+++++++.+...
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 4566889999999999999999999998899999999976532 22334566677766665 59999999999999999
Q ss_pred EEEEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 664 LYLVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
+|++|||+. ++|..++.. .+.+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++....
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~- 166 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV- 166 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc-
Confidence 999999985 477777765 3578999999999999999999997 699999999999999999999999999986310
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC----CCccceeechhHHHHHHHhCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG----HGTTADWWSVGIILFELIVGI 817 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~----ys~kSDIWSLGVILYELLTGk 817 (1003)
. ........|++.|+|||++.+.. ++.++||||||+++|+|++|+
T Consensus 167 ~-------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 215 (296)
T cd06618 167 D-------------------------------SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215 (296)
T ss_pred C-------------------------------CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC
Confidence 0 00011235788999999997654 788999999999999999999
Q ss_pred CCCCCCC-hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 818 PPFNAEH-PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 818 ~PF~~~~-~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
.||.... ..+.+..+.....+.......++.++.+||.+||..||.+|| ++++++.||||..
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---~~~~il~~~~~~~ 278 (296)
T cd06618 216 FPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRP---KYRELLQHPFIRR 278 (296)
T ss_pred CCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCC---CHHHHhcChhhhc
Confidence 9997633 234455555443222112234789999999999999999999 9999999999984
No 316
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.2e-38 Score=342.02 Aligned_cols=257 Identities=23% Similarity=0.378 Sum_probs=212.4
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCC-------CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEe
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTT-------GDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFY 656 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~t-------gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~ 656 (1003)
.....+|++.+.||+|+||.||+|++... +..||+|+++.. ......+.+.+|+.++..+ +||||+++++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 33445799999999999999999987432 236899988743 2334457888999999999 8999999999
Q ss_pred eeeccceEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcce
Q 001857 657 SFTCRENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1003)
Q Consensus 657 ~f~d~~~lyLVmEy~~GGSL~d~L~~~g----------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1003)
.+.....+|++|||+++|+|.+++.... .++...+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 9999999999999999999999997532 367788889999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCcc
Q 001857 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTT 800 (1003)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 800 (1003)
|++.++.+||+|||+++..... . .........++..|+|||++.+..++.+
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~--~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 216 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNI--D---------------------------YYKKTTNGRLPVKWMAPEALFDRVYTHQ 216 (334)
T ss_pred EEcCCCcEEECCcccceecccc--c---------------------------ccccccCCCcCceEcCHHHhccCCcCch
Confidence 9999999999999998731100 0 0001112344578999999999999999
Q ss_pred ceeechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 801 ADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 801 SDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
+|||||||++|||++ |..||.+.+..+.+..+..... +..+..++.++.+||.+||..+|.+|| ++.+++++
T Consensus 217 ~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp---s~~ell~~ 289 (334)
T cd05100 217 SDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTHELYMIMRECWHAVPSQRP---TFKQLVED 289 (334)
T ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcccChhhCc---CHHHHHHH
Confidence 999999999999998 8999998888888777755432 234567889999999999999999999 89999886
No 317
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=9.7e-38 Score=324.53 Aligned_cols=247 Identities=24% Similarity=0.362 Sum_probs=207.6
Q ss_pred EEeeccCceEEEEEEECC-CCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEec
Q 001857 595 KPISRGAFGRVFLAKKRT-TGD--LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYL 671 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~-tgk--~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~ 671 (1003)
+.||.|+||.||+|.+.. +++ .||+|++...... ...+.+.+|+.++++++||||+++++.+.. ..+|+||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 368999999999999865 333 6999998875433 566788999999999999999999999988 8899999999
Q ss_pred cCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 672 NGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 672 ~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
++++|.+++.... .+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||+++.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~----- 152 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED----- 152 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc-----
Confidence 9999999997754 689999999999999999999999999999999999999999999999999874110000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQI 828 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei 828 (1003)
.........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+.
T Consensus 153 -----------------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~ 209 (257)
T cd05040 153 -----------------------HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI 209 (257)
T ss_pred -----------------------ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 0001113567889999999999899999999999999999998 9999988887777
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
...+...... ...+..++..+.+++.+||+.+|.+|| ++.++++
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~~~ 253 (257)
T cd05040 210 LKKIDKEGER-LERPEACPQDIYNVMLQCWAHNPADRP---TFAALRE 253 (257)
T ss_pred HHHHHhcCCc-CCCCccCCHHHHHHHHHHCCCCcccCC---CHHHHHH
Confidence 7776653332 234567889999999999999999999 8888775
No 318
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-37 Score=330.41 Aligned_cols=253 Identities=20% Similarity=0.314 Sum_probs=206.2
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCE----EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDL----FAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~----VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
..++|++++.||+|+||+||+|.+..++.. +++|++... ........+..|..++..++||||+++++++. ..
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~ 81 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GA 81 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CC
Confidence 346899999999999999999999877774 666665432 12334467778888999999999999999875 45
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
..++++||+++|+|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 678999999999999999764 5789999999999999999999999999999999999999999999999999874110
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF 820 (1003)
.. .........|+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 162 ~~-----------------------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~ 212 (279)
T cd05111 162 DD-----------------------------KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212 (279)
T ss_pred CC-----------------------------cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence 00 0001123457788999999998889999999999999999998 99999
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+.....+.+.+.++. .+..+..++.++.+++.+||..||.+|| ++.++++
T Consensus 213 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rp---s~~el~~ 263 (279)
T cd05111 213 AGMRPHEVPDLLEKGE--RLAQPQICTIDVYMVMVKCWMIDENVRP---TFKELAN 263 (279)
T ss_pred CCCCHHHHHHHHHCCC--cCCCCCCCCHHHHHHHHHHcCCCcccCc---CHHHHHH
Confidence 8877766554443332 2233456788999999999999999999 8888866
No 319
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-39 Score=364.75 Aligned_cols=247 Identities=24% Similarity=0.425 Sum_probs=213.3
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
|.+.++...-++-||.|+-|.||+|+.. ++.||||.++.- -..++.-|++|+||||+.+.++|.....
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVCTQSPC 186 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeeecCCce
Confidence 4455666677888999999999999874 688999976421 1245667899999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+|||||||..|.|+.+|+....+.......+..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++..
T Consensus 187 yCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~---- 262 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL---- 262 (904)
T ss_pred eEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhh----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998831
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
.....+-+++||..|||||+|++.+-+.|+|||||||+|||||||..||.+.
T Consensus 263 ----------------------------~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV 314 (904)
T KOG4721|consen 263 ----------------------------SDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV 314 (904)
T ss_pred ----------------------------hhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc
Confidence 0112345799999999999999999999999999999999999999999887
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCC
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHV 878 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHP 878 (1003)
+...++--+=..-..+| +|..+++.++=||++||.-.|..|| ++.+||.|-
T Consensus 315 dssAIIwGVGsNsL~Lp-vPstcP~GfklL~Kqcw~sKpRNRP---SFrqil~Hl 365 (904)
T KOG4721|consen 315 DSSAIIWGVGSNSLHLP-VPSTCPDGFKLLLKQCWNSKPRNRP---SFRQILLHL 365 (904)
T ss_pred chheeEEeccCCccccc-CcccCchHHHHHHHHHHhcCCCCCc---cHHHHHHHH
Confidence 76555444333333333 5788999999999999999999999 899999983
No 320
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=374.98 Aligned_cols=256 Identities=28% Similarity=0.486 Sum_probs=211.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeee-ecc-----
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSF-TCR----- 661 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f-~d~----- 661 (1003)
.+++|.+.|.+|||+.||+|++...|..||||.+-.. ++...+.+.+|+++|+.|. |+|||.+++.. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 3588999999999999999999888899999987653 5677889999999999996 99999999933 221
Q ss_pred -ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC--ceeccCCCcceeecCCCcEEEeecCCc
Q 001857 662 -ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLR--VVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 662 -~~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~G--IIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
-.++|+||||.||.|-+++... ..|++.++..|+.++++|+.+||.+. |||||||-|||||+.+|+.||||||.|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 2478999999999999999743 56999999999999999999999998 999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc---cCCCCccceeechhHHHHHH
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL---GTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~---g~~ys~kSDIWSLGVILYEL 813 (1003)
...... +. ....+.. .+. .-...-|+.|+|||++. +.+.+.|+|||||||+||-|
T Consensus 194 tt~~~~-------~~---------~~~e~~~---ve~---eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 194 TTKILS-------PT---------SAQEVNY---VEE---EIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred ccccCC-------Cc---------cHHHHHH---HHH---HHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence 731110 00 0001111 111 11235699999999984 67889999999999999999
Q ss_pred HhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 814 IVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 814 LTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
+....||..... -.|+++++.+|.. ..++..+++||+.||+.||.+|| ++.+++.+
T Consensus 252 Cy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RP---nI~Qv~~~ 307 (738)
T KOG1989|consen 252 CYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERP---NIYQVLEE 307 (738)
T ss_pred HHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCC---CHHHHHHH
Confidence 999999987533 3788999999876 46899999999999999999999 88777765
No 321
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.1e-38 Score=345.81 Aligned_cols=259 Identities=27% Similarity=0.422 Sum_probs=206.6
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEE-----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKK-----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYS 657 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArd-----k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~ 657 (1003)
|....++|++.+.||+|+||.||+|++ ..+++.||||+++... .......+.+|+.++..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 79 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcce
Confidence 344557899999999999999999985 3467899999987542 233456788999999999 68999999988
Q ss_pred eecc-ceEEEEEEeccCCChHHHHHhc-----------------------------------------------------
Q 001857 658 FTCR-ENLYLVMEYLNGGDLYSLLRNL----------------------------------------------------- 683 (1003)
Q Consensus 658 f~d~-~~lyLVmEy~~GGSL~d~L~~~----------------------------------------------------- 683 (1003)
+... ..+|+|||||++|+|.+++...
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 7654 4689999999999999998642
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 684 --------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 684 --------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~------ 233 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP------ 233 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCc------
Confidence 136777888899999999999999999999999999999999999999999987411000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQI 828 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei 828 (1003)
.........+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus 234 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 290 (343)
T cd05103 234 -----------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 290 (343)
T ss_pred -----------------------chhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH
Confidence 0001122346778999999999999999999999999999997 9999976544333
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
+...+..... +..+...++++.+++.+||+.||.+|| ++.+|++|
T Consensus 291 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~cl~~~p~~Rp---s~~eil~~ 335 (343)
T cd05103 291 FCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRP---TFSELVEH 335 (343)
T ss_pred HHHHHhccCC-CCCCCCCCHHHHHHHHHHccCChhhCc---CHHHHHHH
Confidence 3333222222 234556788999999999999999999 99999987
No 322
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-38 Score=360.32 Aligned_cols=256 Identities=28% Similarity=0.480 Sum_probs=206.8
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyLV 667 (1003)
..|+++++||.||.++||++..-. ...||+|.+... ..+...+..+.+|+.+|.+|+ |.+||+||++-..++.+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 359999999999999999998744 455666654332 245667789999999999994 89999999999999999999
Q ss_pred EEeccCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGC-LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~-L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||= ..+|..+|+.... ++...+++|..||+.|+.++|.+||||.||||.|+|+- .|.+||+|||+|.....+.+.
T Consensus 439 mE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs- 515 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS- 515 (677)
T ss_pred eecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccc-
Confidence 9975 4599999987654 44468999999999999999999999999999999985 489999999999853222111
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC-----------CCccceeechhHHHHHHHh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-----------HGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~-----------ys~kSDIWSLGVILYELLT 815 (1003)
-.+.+.+||+.||+||.+.... .+.++||||||||||+|+.
T Consensus 516 ----------------------------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY 567 (677)
T KOG0596|consen 516 ----------------------------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY 567 (677)
T ss_pred ----------------------------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence 1234679999999999997533 3578999999999999999
Q ss_pred CCCCCCCCC-hhhHHHhhhcc--CCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 816 GIPPFNAEH-PQQIFDNILNR--KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 816 Gk~PF~~~~-~~ei~qkIl~~--~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
|++||.... ...-+..|..- .++||.++... ++.++++.||++||.+|| ++.++|+|||+..
T Consensus 568 gktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~--~li~~mK~CL~rdPkkR~---si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 568 GKTPFGQIINQIAKLHAITDPNHEIEFPDIPEND--ELIDVMKCCLARDPKKRW---SIPELLQHPFLQI 632 (677)
T ss_pred cCCchHHHHHHHHHHHhhcCCCccccccCCCCch--HHHHHHHHHHhcCcccCC---CcHHHhcCccccc
Confidence 999997543 33334455543 33566655432 399999999999999999 9999999999985
No 323
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.2e-37 Score=336.69 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=214.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
..|...+.||.|+||.||+|+++.++..+|+|.+.............+.+|+.+++.++|||++++++++......|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 44888899999999999999999999999999987543334445567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+. |+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~------- 166 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------- 166 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec-------
Confidence 9996 588877754 4568999999999999999999999999999999999999999999999999986310
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+
T Consensus 167 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 218 (308)
T cd06634 167 ----------------------------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (308)
T ss_pred ----------------------------CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc
Confidence 0123468899999999853 457889999999999999999999998766
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
.......+.....+. .....++..+.+||.+||..+|.+|| ++.++++||||...
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~P~~Rp---~~~~ll~~~~~~~~ 273 (308)
T cd06634 219 AMSALYHIAQNESPA-LQSGHWSEYFRNFVDSCLQKIPQDRP---TSEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHHHhhcCCCC-cCcccccHHHHHHHHHHhhCCcccCC---CHHHHhhCcccccc
Confidence 555544444433221 12346889999999999999999999 99999999999864
No 324
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=366.33 Aligned_cols=251 Identities=29% Similarity=0.460 Sum_probs=221.9
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|.-++.||.|+||.||.|++..+...||||.+..+.....+.-..++.|+.+|..++|||++.+.++|-.+...||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 77788999999999999999999999999998876555556668999999999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 671 LNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 671 ~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
|-| +-.+++.-. +++.+..+..|..+.+.||.|||+++.||||||..|||+++.|.|||+|||.|...
T Consensus 108 ClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~---------- 176 (948)
T KOG0577|consen 108 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM---------- 176 (948)
T ss_pred Hhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc----------
Confidence 965 777777543 57999999999999999999999999999999999999999999999999998641
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
...++++|||+|||||||.. +.|+-++||||||++..||...+||+...+..
T Consensus 177 -------------------------~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM 231 (948)
T KOG0577|consen 177 -------------------------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 231 (948)
T ss_pred -------------------------CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH
Confidence 12357999999999999974 56899999999999999999999998888877
Q ss_pred hHHHhhhccCCCCCCC-CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 827 QIFDNILNRKIPWPRV-PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 827 ei~qkIl~~~~~~P~l-p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
..+.-|.....+ .+ ...+|..+..|+..||++-|.+|| |.+++|.|+|...
T Consensus 232 SALYHIAQNesP--tLqs~eWS~~F~~Fvd~CLqKipqeRp---tse~ll~H~fv~R 283 (948)
T KOG0577|consen 232 SALYHIAQNESP--TLQSNEWSDYFRNFVDSCLQKIPQERP---TSEELLKHRFVLR 283 (948)
T ss_pred HHHHHHHhcCCC--CCCCchhHHHHHHHHHHHHhhCcccCC---cHHHHhhcchhcc
Confidence 776666655443 33 357999999999999999999999 9999999999863
No 325
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=5.3e-38 Score=329.49 Aligned_cols=254 Identities=34% Similarity=0.588 Sum_probs=211.6
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|++.+.||.|+||.||+|++..+++.||+|++.... ......+.+.+|+.+++.++||||+++++++.+...+|+||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 678899999999999999999999999999998654 2233346677899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 671 LNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 671 ~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
++ ++|.+++.+. ..+++..+..++.||+.||+|||++||+||||+|+||+++.++.++|+|||+++.....
T Consensus 80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~------- 151 (282)
T cd07829 80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP------- 151 (282)
T ss_pred cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCC-------
Confidence 97 4999999876 57999999999999999999999999999999999999999999999999998731100
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhhH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei 828 (1003)
........++..|+|||++.+. .++.++|+|||||++|||++|.+||...+....
T Consensus 152 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~ 207 (282)
T cd07829 152 ------------------------LRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ 207 (282)
T ss_pred ------------------------ccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 0011234567889999999876 789999999999999999999999988766555
Q ss_pred HHhhhcc------------------CCCCCC--------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 829 FDNILNR------------------KIPWPR--------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 829 ~qkIl~~------------------~~~~P~--------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+.++... ...++. ....++..+.++|.+||..||.+|| ++.+++.||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp---~~~~~l~~p~~ 282 (282)
T cd07829 208 LFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI---SAKEALKHPYF 282 (282)
T ss_pred HHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCC---CHHHHhhCcCC
Confidence 4444321 001111 1123578899999999999999999 99999999998
No 326
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.7e-37 Score=324.98 Aligned_cols=248 Identities=24% Similarity=0.413 Sum_probs=205.4
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.++|++.+.||+|+||.||+|.+..+ ..+|+|++..... ..+.+.+|+.+++.++||||+++++++. .+..|++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIV 78 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEE
Confidence 36799999999999999999998654 4699998765432 2356788999999999999999998875 4568999
Q ss_pred EEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 668 MEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|||+.+++|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+||++++++.++|+|||+++..... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~--~ 156 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN--E 156 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCC--c
Confidence 9999999999999764 34789999999999999999999999999999999999999999999999998731000 0
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~ 824 (1003)
........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+..
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 208 (260)
T cd05069 157 ----------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV 208 (260)
T ss_pred ----------------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 000112346778999999998889999999999999999999 999999888
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..+....+.... . +..+..++..+.+||.+||.+||.+|| +++++++
T Consensus 209 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 255 (260)
T cd05069 209 NREVLEQVERGY-R-MPCPQGCPESLHELMKLCWKKDPDERP---TFEYIQS 255 (260)
T ss_pred HHHHHHHHHcCC-C-CCCCcccCHHHHHHHHHHccCCcccCc---CHHHHHH
Confidence 777777665432 2 234567899999999999999999999 7777764
No 327
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.1e-37 Score=321.91 Aligned_cols=250 Identities=23% Similarity=0.403 Sum_probs=210.8
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
..+|++.+.||.|+||.||+|.+. .+..+|+|++...... ...+.+|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 357999999999999999999885 4678999998754321 24578899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||+.+++|.+++... +.+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ--- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc---
Confidence 9999999999999764 568999999999999999999999999999999999999999999999999987310000
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~ 825 (1003)
........++..|+|||++.+..++.++|||||||++|||++ |.+||.....
T Consensus 155 ---------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 207 (256)
T cd05112 155 ---------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN 207 (256)
T ss_pred ---------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 000112345678999999998889999999999999999998 9999998887
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
....+.+...... ..+...+..+.+|+.+||+.+|.+|| ++.+++++
T Consensus 208 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~Rp---~~~~~l~~ 254 (256)
T cd05112 208 SEVVETINAGFRL--YKPRLASQSVYELMQHCWKERPEDRP---SFSLLLHQ 254 (256)
T ss_pred HHHHHHHhCCCCC--CCCCCCCHHHHHHHHHHcccChhhCC---CHHHHHHh
Confidence 7777776554322 22455789999999999999999999 89998864
No 328
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.1e-37 Score=327.53 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=210.7
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk----~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
..+|++++.||+|+||.||+|.++.+|. .||+|++.+... ......+.+|+.++..++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 4679999999999999999999877665 589998765532 3455678899999999999999999999887 78
Q ss_pred EEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 664 LYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
.|+||||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999999999764 56999999999999999999999999999999999999999999999999998741100
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~ 821 (1003)
.. ........++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 163 ~~-----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 213 (279)
T cd05057 163 EK-----------------------------EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE 213 (279)
T ss_pred cc-----------------------------ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCC
Confidence 00 000111234678999999988889999999999999999998 999999
Q ss_pred CCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+....++.+.+..... ...+..++..+.++|.+||..||.+|| ++.++++
T Consensus 214 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~p~~Rp---~~~~l~~ 263 (279)
T cd05057 214 GIPAVEIPDLLEKGER--LPQPPICTIDVYMVLVKCWMIDAESRP---TFKELIN 263 (279)
T ss_pred CCCHHHHHHHHhCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCC---CHHHHHH
Confidence 9888887777765432 233556889999999999999999999 7776653
No 329
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.5e-37 Score=332.44 Aligned_cols=254 Identities=23% Similarity=0.387 Sum_probs=204.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECC----------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRT----------------TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVV 652 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~----------------tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIV 652 (1003)
++|++.+.||+|+||.||+|++.. ++..||+|++.... .......+.+|+.+++.++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 579999999999999999996532 34579999987542 234456788999999999999999
Q ss_pred EEEeeeeccceEEEEEEeccCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCccee
Q 001857 653 RFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-----------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLL 721 (1003)
Q Consensus 653 kL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g-----------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNIL 721 (1003)
++++++...+.+|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 99999999999999999999999999997642 3667789999999999999999999999999999999
Q ss_pred ecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccc
Q 001857 722 IAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTA 801 (1003)
Q Consensus 722 Ld~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kS 801 (1003)
++.++.++|+|||+++...... .........+++.|+|||+..+..++.++
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~ 213 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGD-----------------------------YYRIQGRAVLPIRWMSWESILLGKFTTAS 213 (296)
T ss_pred EcCCCCEEeccCcccccccCCc-----------------------------ceeccCcCcCccccCCHHHHhcCCccchh
Confidence 9999999999999987311000 00011223457789999999888899999
Q ss_pred eeechhHHHHHHHh--CCCCCCCCChhhHHHhhhc-----cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 802 DWWSVGIILFELIV--GIPPFNAEHPQQIFDNILN-----RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 802 DIWSLGVILYELLT--Gk~PF~~~~~~ei~qkIl~-----~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
|||||||++|||++ |..||...+..+....... ........+..++..+.+||.+||+.||.+|| ++.+|
T Consensus 214 DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~i 290 (296)
T cd05095 214 DVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERP---SFQEI 290 (296)
T ss_pred hhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCC---CHHHH
Confidence 99999999999998 7899987766555443321 01111123456789999999999999999999 78777
Q ss_pred Hc
Q 001857 875 KQ 876 (1003)
Q Consensus 875 Lq 876 (1003)
.+
T Consensus 291 ~~ 292 (296)
T cd05095 291 HA 292 (296)
T ss_pred HH
Confidence 54
No 330
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.1e-38 Score=326.30 Aligned_cols=232 Identities=31% Similarity=0.514 Sum_probs=194.0
Q ss_pred cCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCChHHH
Q 001857 600 GAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSL 679 (1003)
Q Consensus 600 G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~ 679 (1003)
|.||+||+|+++.+++.||+|++.+.. ...+|...+....||||+++++.+...+.+|+||||++||+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999987643 123344555566799999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCC
Q 001857 680 LRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLG 759 (1003)
Q Consensus 680 L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g 759 (1003)
+.+...+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~------------------- 136 (237)
T cd05576 76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE------------------- 136 (237)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccc-------------------
Confidence 9887889999999999999999999999999999999999999999999999999875210
Q ss_pred CCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCC
Q 001857 760 DEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPW 839 (1003)
Q Consensus 760 ~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~ 839 (1003)
.......++..|+|||++.+..++.++|+|||||++|||++|..||...... . .....
T Consensus 137 ---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~-----~~~~~- 194 (237)
T cd05576 137 ---------------DSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-I-----NTHTT- 194 (237)
T ss_pred ---------------cccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c-----ccccc-
Confidence 0011235677899999998888999999999999999999999998643221 1 00111
Q ss_pred CCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCC
Q 001857 840 PRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFF 880 (1003)
Q Consensus 840 P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFF 880 (1003)
..++..+++.+++||.+||+.||.+|++. .+++++++||||
T Consensus 195 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 195 LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 13456789999999999999999999954 246999999998
No 331
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.8e-37 Score=327.29 Aligned_cols=251 Identities=24% Similarity=0.351 Sum_probs=198.3
Q ss_pred eEEEEEeeccCceEEEEEEE----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceE
Q 001857 591 FEIIKPISRGAFGRVFLAKK----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArd----k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~l 664 (1003)
|++++.||+|+||+||++.. ..++..||+|+++... .......+.+|+.+|+.++||||+++++++... ..+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 49999999999999988753 3578899999987542 123446778899999999999999999987653 468
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|+||||+++++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..... .
T Consensus 84 ~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~-~ 161 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG-H 161 (283)
T ss_pred EEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCc-c
Confidence 999999999999999976 45999999999999999999999999999999999999999999999999998741100 0
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
..........++..|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 162 ---------------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 214 (283)
T cd05080 162 ---------------------------EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP 214 (283)
T ss_pred ---------------------------hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCc
Confidence 00001112345677999999998889999999999999999999999986432
Q ss_pred hh--hH------------HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 825 PQ--QI------------FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 825 ~~--ei------------~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.. +. ......... .+..+..++.++.+|+.+||+.+|.+|| ++.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~i~~ 276 (283)
T cd05080 215 KKFEEMIGPKQGQMTVVRLIELLERGM-RLPCPKNCPQEVYILMKNCWETEAKFRP---TFRSLIP 276 (283)
T ss_pred chhhhhhcccccccchhhhhhhhhcCC-CCCCCCCCCHHHHHHHHHHhccChhhCC---CHHHHHH
Confidence 11 00 111111111 1223567889999999999999999999 8888774
No 332
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.2e-38 Score=337.62 Aligned_cols=255 Identities=26% Similarity=0.408 Sum_probs=201.2
Q ss_pred CceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCChHHHH
Q 001857 601 AFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLL 680 (1003)
Q Consensus 601 ~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L 680 (1003)
++|.||+++...+++.||+|++..... .......+.+|+.+++.++||||++++++|...+..|++|||+++|+|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 556777777777999999999976532 3445678999999999999999999999999999999999999999999999
Q ss_pred Hhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccC
Q 001857 681 RNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLL 758 (1003)
Q Consensus 681 ~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~ 758 (1003)
... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||.+........ ..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~--~~---------- 158 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK--RQ---------- 158 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccc--cc----------
Confidence 764 4589999999999999999999999999999999999999999999999998863211000 00
Q ss_pred CCCCccchhhhhhhhhhccccccCCCCCCCchhhcc--CCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccC
Q 001857 759 GDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG--TGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRK 836 (1003)
Q Consensus 759 g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g--~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~ 836 (1003)
...........++..|+|||++.+ ..++.++|||||||++|||++|..||..............+.
T Consensus 159 ------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~ 226 (314)
T cd08216 159 ------------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGT 226 (314)
T ss_pred ------------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence 000011234567889999999976 458899999999999999999999998655433322111111
Q ss_pred CC-------CC------------------------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 837 IP-------WP------------------------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 837 ~~-------~P------------------------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
.+ ++ .....++.++.+||.+||++||.+|| ++.++++||||+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~ll~~p~~~~~ 301 (314)
T cd08216 227 VPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP---SASQLLNHSFFKQC 301 (314)
T ss_pred CccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc---CHHHHhcCchHhhh
Confidence 00 00 01123457899999999999999999 99999999999865
No 333
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.3e-37 Score=328.03 Aligned_cols=252 Identities=35% Similarity=0.522 Sum_probs=206.7
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEEEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
|++.+.||.|+||+||+|....+++.||||.+...... .......+|+..+..++ ||||+++++.+...+..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 78899999999999999999989999999998654321 12233457889999999 9999999999999999999999
Q ss_pred eccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 670 YLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|+ +|+|.+++.... .+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||+++.....
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 789999997764 7899999999999999999999999999999999999999999999999998731100
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCCCChh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNAEHPQ 826 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ 826 (1003)
.......|+..|+|||++.+ ..++.++|+||||+++|+|++|++||......
T Consensus 153 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~ 205 (283)
T cd07830 153 ---------------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI 205 (283)
T ss_pred ---------------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH
Confidence 01123468899999998854 45789999999999999999999999877665
Q ss_pred hHHHhhhccCCC-------------------CC--------CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 827 QIFDNILNRKIP-------------------WP--------RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 827 ei~qkIl~~~~~-------------------~P--------~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
+.+..+...... ++ ......+..+.+||++||+.+|.+|| ++.|++.|||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ei~~~~~ 282 (283)
T cd07830 206 DQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRP---TASQALQHPY 282 (283)
T ss_pred HHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCC---CHHHHhhCCC
Confidence 544433321000 00 01123368899999999999999999 9999999999
Q ss_pred C
Q 001857 880 F 880 (1003)
Q Consensus 880 F 880 (1003)
|
T Consensus 283 ~ 283 (283)
T cd07830 283 F 283 (283)
T ss_pred C
Confidence 8
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.2e-38 Score=343.75 Aligned_cols=265 Identities=31% Similarity=0.513 Sum_probs=212.4
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc--ce
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCR--EN 663 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~--~~ 663 (1003)
..++|++.+.||.|+||.||+|.+..+++.||+|.+.+... .......+.+|+.++..+ +||||+++++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 34679999999999999999999998999999998865322 223345677899999999 999999999988654 36
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
+|+||||+.+ +|..++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 84 IYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred EEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 8999999974 999998775 78899999999999999999999999999999999999999999999999987421100
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.. ..........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 162 ~~--------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~ 215 (337)
T cd07852 162 EN--------------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPG 215 (337)
T ss_pred cc--------------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCC
Confidence 00 00011234578999999998865 4578999999999999999999999987
Q ss_pred CChhhHHHhhhccC----------------------------CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 823 EHPQQIFDNILNRK----------------------------IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~----------------------------~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
.........+.... .........++.++.+||.+||+.||.+|| ++.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp---s~~~i 292 (337)
T cd07852 216 TSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRL---TAEEA 292 (337)
T ss_pred CChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCccccc---CHHHH
Confidence 66554433332211 011112234789999999999999999999 99999
Q ss_pred HcCCCCCCC
Q 001857 875 KQHVFFKDI 883 (1003)
Q Consensus 875 LqHPFFk~I 883 (1003)
++||||+.+
T Consensus 293 l~~~~~~~~ 301 (337)
T cd07852 293 LEHPYVAQF 301 (337)
T ss_pred hhChhhhhh
Confidence 999999864
No 335
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-40 Score=396.96 Aligned_cols=259 Identities=35% Similarity=0.599 Sum_probs=222.6
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+++-...||.|.||.||-|.+..+|...|+|-++..... ......+.+|..++..++|||+|++|++-...+.+||.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 466778899999999999999999999999998765544 5566788899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
||.||+|.+.+...+..++...+.|..|++.||.|||++|||||||||+||+++.+|.+|++|||.|+.... +..+
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~-~~~~--- 1390 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN-NAQT--- 1390 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecC-chhc---
Confidence 999999999999888899999999999999999999999999999999999999999999999999984211 1100
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCCCCCC-h
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPFNAEH-P 825 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~kSDIWSLGVILYELLTGk~PF~~~~-~ 825 (1003)
+ ........|||.|||||++.+ .+++.+.|||||||++.||+||+.||...+ .
T Consensus 1391 ---------------~--------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne 1447 (1509)
T KOG4645|consen 1391 ---------------M--------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE 1447 (1509)
T ss_pred ---------------C--------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch
Confidence 0 122346799999999999976 567889999999999999999999997543 3
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
..+...+-.+.. |.+|..+|++.+|||.+||+.||++|+ ++.||++|.|=+
T Consensus 1448 ~aIMy~V~~gh~--Pq~P~~ls~~g~dFle~Cl~~dP~~Rw---~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1448 WAIMYHVAAGHK--PQIPERLSSEGRDFLEHCLEQDPKMRW---TASQLLEHAFGK 1498 (1509)
T ss_pred hHHHhHHhccCC--CCCchhhhHhHHHHHHHHHhcCchhhh---HHHHHHHhhccc
Confidence 334334433333 677888999999999999999999999 999999998765
No 336
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.8e-37 Score=319.78 Aligned_cols=245 Identities=25% Similarity=0.391 Sum_probs=204.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
++||.|+||.||+|... ++..||+|++.... .......+.+|+.+++.++||||+++++.+......|+||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 36899999999999864 68899999986542 2333456889999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 675 DLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 675 SL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
+|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++...... .
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~-~--------- 147 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG-I--------- 147 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccc-c---------
Confidence 999998754 46899999999999999999999999999999999999999999999999998631000 0
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhHHHhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNI 832 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkI 832 (1003)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+
T Consensus 148 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~ 207 (250)
T cd05085 148 --------------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV 207 (250)
T ss_pred --------------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence 000112244678999999998889999999999999999998 99999888777776666
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 833 l~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.... ....+..++..+.+|+.+||..+|.+|| ++.++++.
T Consensus 208 ~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~~ 247 (250)
T cd05085 208 EKGY--RMSCPQKCPDDVYKVMQRCWDYKPENRP---KFSELQKE 247 (250)
T ss_pred HcCC--CCCCCCCCCHHHHHHHHHHcccCcccCC---CHHHHHHH
Confidence 5432 2234567899999999999999999999 88888753
No 337
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.3e-37 Score=320.57 Aligned_cols=245 Identities=25% Similarity=0.353 Sum_probs=206.0
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
++||.|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++.++||||+++++++.+....|+||||+.|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 368999999999999877 999999998765332 34567889999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCcc
Q 001857 675 DLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVS 753 (1003)
Q Consensus 675 SL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s 753 (1003)
+|.+++... ..++...+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--------- 148 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY--------- 148 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc---------
Confidence 999999664 5689999999999999999999999999999999999999999999999999873110000
Q ss_pred CcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhHHHhh
Q 001857 754 GTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNI 832 (1003)
Q Consensus 754 ~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkI 832 (1003)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...........+
T Consensus 149 --------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~ 208 (251)
T cd05041 149 --------------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERI 208 (251)
T ss_pred --------------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHH
Confidence 000112234677999999998889999999999999999998 89999887776666666
Q ss_pred hccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 833 LNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 833 l~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.... . +..+..++.++.+||.+||..+|.+|| ++.++++
T Consensus 209 ~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~ell~ 247 (251)
T cd05041 209 ESGY-R-MPAPQLCPEEIYRLMLQCWAYDPENRP---SFSEIYN 247 (251)
T ss_pred hcCC-C-CCCCccCCHHHHHHHHHHhccChhhCc---CHHHHHH
Confidence 4432 2 234567899999999999999999999 9999886
No 338
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.8e-37 Score=321.65 Aligned_cols=250 Identities=22% Similarity=0.378 Sum_probs=207.0
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
...++|++.+.||+|+||.||+|.+. .+..+|+|++.... ...+.+.+|+.+++.++|+||+++++.+.. ...|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 34578999999999999999999864 45679999886532 234678899999999999999999999887 7789
Q ss_pred EEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 666 LVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
++|||+++++|.+++.+. ..++...+..++.||+.||.|||+.|++||||||+||+++.++.+||+|||++......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~- 155 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN- 155 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC-
Confidence 999999999999999764 35788889999999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
. ........++..|+|||++.+..++.++|+|||||++|+|++ |.+||..
T Consensus 156 -~----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 206 (260)
T cd05073 156 -E----------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 206 (260)
T ss_pred -C----------------------------cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCC
Confidence 0 000112345678999999998889999999999999999998 9999998
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+.......+.... .. ..+...+.++.+++.+||..+|.+|| ++.++++
T Consensus 207 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~l~~ 255 (260)
T cd05073 207 MSNPEVIRALERGY-RM-PRPENCPEELYNIMMRCWKNRPEERP---TFEYIQS 255 (260)
T ss_pred CCHHHHHHHHhCCC-CC-CCcccCCHHHHHHHHHHcccCcccCc---CHHHHHH
Confidence 87776666654432 22 23467889999999999999999999 7766653
No 339
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.1e-37 Score=329.02 Aligned_cols=249 Identities=31% Similarity=0.517 Sum_probs=205.5
Q ss_pred EEEEEeeccCceEEEEEEEC----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 592 EIIKPISRGAFGRVFLAKKR----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 592 eIlk~LG~G~FGtVyLArdk----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.+.+.||.|+||.||+|.+. ..+..|+||+++.. ......+.+.+|++++..++||||+++++++...+.+++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 56789999999999999997 34668999999542 2344568899999999999999999999999988889999
Q ss_pred EEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 668 MEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
||||++|+|.+++... ..++......++.||+.||.|||+++|+|++|+++|||++.++.+||+|||++.......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~-- 157 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS-- 157 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 9999999999999886 679999999999999999999999999999999999999999999999999987410000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~ 824 (1003)
.........+...|+|||.+.+..++.++||||||+++|||++ |+.||...+
T Consensus 158 ---------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~ 210 (259)
T PF07714_consen 158 ---------------------------KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD 210 (259)
T ss_dssp ---------------------------SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC
T ss_pred ---------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0011223456778999999999889999999999999999999 789999988
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..++...+..... +..+..++..+.++|.+||..||.+|| ++.+|++
T Consensus 211 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~C~~~~p~~RP---s~~~i~~ 257 (259)
T PF07714_consen 211 NEEIIEKLKQGQR--LPIPDNCPKDIYSLIQQCWSHDPEKRP---SFQEILQ 257 (259)
T ss_dssp HHHHHHHHHTTEE--TTSBTTSBHHHHHHHHHHT-SSGGGS-----HHHHHH
T ss_pred ccccccccccccc--ceeccchhHHHHHHHHHHcCCChhhCc---CHHHHHh
Confidence 8888888855443 335677899999999999999999999 8888874
No 340
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.8e-37 Score=323.53 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=208.6
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~t---gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
.++|.+.+.||+|+||.||+|.+... ...||+|.+.... .....+.+.+|+.+++.++||||+++++++.+ ...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 35699999999999999999987544 3468999876432 23455688899999999999999999998875 457
Q ss_pred EEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|+||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 89999999999999997654 58999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNA 822 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~ 822 (1003)
........+++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 162 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~ 211 (270)
T cd05056 162 ------------------------------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQG 211 (270)
T ss_pred ------------------------------ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 000112235678999999988889999999999999999996 9999988
Q ss_pred CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 823 ~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.+..+....+..... +..+..++..+.+||.+||..+|.+|| ++.+++..
T Consensus 212 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp---t~~~~~~~ 261 (270)
T cd05056 212 VKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSKRP---RFTELKAQ 261 (270)
T ss_pred CCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 877776666654432 234567899999999999999999999 88887764
No 341
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.8e-37 Score=321.75 Aligned_cols=243 Identities=26% Similarity=0.452 Sum_probs=204.9
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.+++|++.+.||+|+||.||++.. +++.||+|++.... ....+.+|+.++..++||||+++++.+... ..|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 457799999999999999999864 68889999986532 235788999999999999999999988754 5799
Q ss_pred EEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
||||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++....
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~--- 152 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSM--- 152 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccc---
Confidence 999999999999997653 588999999999999999999999999999999999999999999999999873100
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~ 823 (1003)
......++..|+|||++.+..++.++|+|||||++|+|++ |++||...
T Consensus 153 -------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 201 (254)
T cd05083 153 -------------------------------GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM 201 (254)
T ss_pred -------------------------------cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence 0011233567999999998889999999999999999997 99999988
Q ss_pred ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 824 ~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+..+....+.... . +..+..++..+.+||.+||+.+|.+|| ++.+++.
T Consensus 202 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~l~~ 249 (254)
T cd05083 202 SLKEVKECVEKGY-R-MEPPEGCPADVYVLMTSCWETEPKKRP---SFHKLRE 249 (254)
T ss_pred CHHHHHHHHhCCC-C-CCCCCcCCHHHHHHHHHHcCCChhhCc---CHHHHHH
Confidence 8777776665442 2 234567899999999999999999999 7877764
No 342
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-38 Score=358.93 Aligned_cols=264 Identities=30% Similarity=0.464 Sum_probs=227.6
Q ss_pred CCCCCCCCcccCCeEEEEEeeccCceEEEEEEECCCCC---E-EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEE
Q 001857 578 PIHPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGD---L-FAIKVLKKADMIRKNAVESILAERDILISVRNPFVVR 653 (1003)
Q Consensus 578 ~~~Psk~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk---~-VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVk 653 (1003)
|+....|.+..++-.+.++||+|+||.||+|+.+..+. . ||+|..+......+.++..+++|+++|+.++|||||+
T Consensus 146 PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr 225 (474)
T KOG0194|consen 146 PIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVR 225 (474)
T ss_pred cccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 44556688888898889999999999999999865422 3 8999988655566788899999999999999999999
Q ss_pred EEeeeeccceEEEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEee
Q 001857 654 FFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTD 732 (1003)
Q Consensus 654 L~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiD 732 (1003)
+|++......+|||||+|+||+|.++|++.+ .++..+...++.+.+.||+|||++++|||||-.+|+|++.++.+||+|
T Consensus 226 ~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISD 305 (474)
T KOG0194|consen 226 FYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISD 305 (474)
T ss_pred EEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCc
Confidence 9999999999999999999999999999887 499999999999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHH
Q 001857 733 FGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 733 FGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYE 812 (1003)
||+++.+..... .....--...|+|||.+....|++++|||||||++||
T Consensus 306 FGLs~~~~~~~~-------------------------------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~E 354 (474)
T KOG0194|consen 306 FGLSRAGSQYVM-------------------------------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWE 354 (474)
T ss_pred cccccCCcceee-------------------------------ccccccCcceecChhhhccCccccccchhheeeeEEe
Confidence 999985211000 0001123467999999999999999999999999999
Q ss_pred HHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 813 LIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 813 LLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+++ |..||.+....++.+.|....++.+ .+...+.++..++.+|+..+|++|| ++.++.+
T Consensus 355 if~~g~~Py~g~~~~~v~~kI~~~~~r~~-~~~~~p~~~~~~~~~c~~~~p~~R~---tm~~i~~ 415 (474)
T KOG0194|consen 355 IFENGAEPYPGMKNYEVKAKIVKNGYRMP-IPSKTPKELAKVMKQCWKKDPEDRP---TMSTIKK 415 (474)
T ss_pred eeccCCCCCCCCCHHHHHHHHHhcCccCC-CCCCCHHHHHHHHHHhccCChhhcc---CHHHHHH
Confidence 998 8899999999999999977666554 4567889999999999999999999 6666553
No 343
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.2e-37 Score=351.52 Aligned_cols=260 Identities=26% Similarity=0.360 Sum_probs=212.5
Q ss_pred CCCcccCCeEEEEEeeccCceEEEEEEEC-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEe
Q 001857 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKR-----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFY 656 (1003)
Q Consensus 583 k~~~~lddYeIlk~LG~G~FGtVyLArdk-----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~ 656 (1003)
.+....++|.+.+.||+|+||.||+|++. .+++.||+|+++... .....+.+.+|+.+|..+. ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 45666778999999999999999999964 345689999997642 2333457889999999997 999999999
Q ss_pred eeeccceEEEEEEeccCCChHHHHHhcC----------------------------------------------------
Q 001857 657 SFTCRENLYLVMEYLNGGDLYSLLRNLG---------------------------------------------------- 684 (1003)
Q Consensus 657 ~f~d~~~lyLVmEy~~GGSL~d~L~~~g---------------------------------------------------- 684 (1003)
++.....+|+|||||++|+|.+++++.+
T Consensus 109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 9999999999999999999999996532
Q ss_pred ----------------------------------------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCc
Q 001857 685 ----------------------------------------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPD 718 (1003)
Q Consensus 685 ----------------------------------------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPe 718 (1003)
.++...+..++.||+.||+|||+.||+||||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~ 268 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAAR 268 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcc
Confidence 2566778889999999999999999999999999
Q ss_pred ceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCC
Q 001857 719 NLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHG 798 (1003)
Q Consensus 719 NILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys 798 (1003)
|||++.++.+||+|||+++....... ........|++.|||||++.+..++
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~ 319 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSN-----------------------------YISKGSTFLPLKWMAPESIFNNLYT 319 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccc-----------------------------cccCCCcCCCCceeChHHhcCCCCC
Confidence 99999999999999999874110000 0011234678899999999998899
Q ss_pred ccceeechhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 799 TTADWWSVGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 799 ~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.++|||||||++|||++ |..||......+.....+..... +..+..++.++.+||.+||..+|.+|| ++.+|++.
T Consensus 320 ~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~l~~li~~cl~~~P~~RP---s~~ell~~ 395 (401)
T cd05107 320 TLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYR-MAKPAHASDEIYEIMQKCWEEKFEIRP---DFSQLVHL 395 (401)
T ss_pred cHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCc---CHHHHHHH
Confidence 99999999999999998 89999876555544444433322 234567899999999999999999999 88888764
No 344
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.7e-37 Score=327.11 Aligned_cols=253 Identities=24% Similarity=0.351 Sum_probs=202.2
Q ss_pred eEEEEEeeccCceEEEEEEE----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--ceE
Q 001857 591 FEIIKPISRGAFGRVFLAKK----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR--ENL 664 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArd----k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~--~~l 664 (1003)
|++++.||+|+||.||+|+. +.++..||+|.++... .......+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 89999999999999999984 4578899999986542 234456789999999999999999999988875 568
Q ss_pred EEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~ 743 (1003)
|+||||++|++|.+++.+. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++......
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999999765 468999999999999999999999999999999999999999999999999987411000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
. .........|+..|+|||++.+..++.++|||||||++|+|+++..|+...
T Consensus 164 ~----------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~ 215 (284)
T cd05079 164 E----------------------------YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSP 215 (284)
T ss_pred c----------------------------ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccc
Confidence 0 000112356778899999999888999999999999999999987765321
Q ss_pred Ch--------------hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 824 HP--------------QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 824 ~~--------------~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.. ............. ...+..++..+.+||.+||+.+|.+|| ++.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~~ 279 (284)
T cd05079 216 MTLFLKMIGPTHGQMTVTRLVRVLEEGKR-LPRPPNCPEEVYQLMRKCWEFQPSKRT---TFQNLIEG 279 (284)
T ss_pred cchhhhhcccccccccHHHHHHHHHcCcc-CCCCCCCCHHHHHHHHHHccCCcccCc---CHHHHHHH
Confidence 10 0111111112222 224567899999999999999999999 89998764
No 345
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.9e-37 Score=323.32 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=194.7
Q ss_pred EEeeccCceEEEEEEECC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEecc
Q 001857 595 KPISRGAFGRVFLAKKRT--TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLN 672 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~--tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~ 672 (1003)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.++||||+++++.+.....+|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 358999999999997533 34578888765432 23345678899999999999999999999999999999999999
Q ss_pred CCChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 673 GGDLYSLLRNLG-----CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 673 GGSL~d~L~~~g-----~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
+|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---- 154 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED---- 154 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch----
Confidence 999999997643 24678888999999999999999999999999999999999999999999986311000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-------CCCCccceeechhHHHHHHHh-CCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-------TGHGTTADWWSVGIILFELIV-GIPP 819 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-------~~ys~kSDIWSLGVILYELLT-Gk~P 819 (1003)
.........+++.|+|||++.. ..++.++|||||||++|||++ |.+|
T Consensus 155 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p 209 (269)
T cd05042 155 -------------------------YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQP 209 (269)
T ss_pred -------------------------heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCC
Confidence 0001123456788999999753 356789999999999999998 8899
Q ss_pred CCCCChhhHHHhhhccC-CC--CCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 820 FNAEHPQQIFDNILNRK-IP--WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 820 F~~~~~~ei~qkIl~~~-~~--~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
|......+....+.... .. .+..+..++..+.+++..|+ .||.+|| ++++|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rp---t~~~v~~ 265 (269)
T cd05042 210 YPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRP---TAEEVHE 265 (269)
T ss_pred CCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCccccc---CHHHHHH
Confidence 98777666555544332 22 23345578899999999999 5999999 7777654
No 346
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.3e-37 Score=324.13 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=209.8
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECC----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-c
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRT----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-R 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d-~ 661 (1003)
..++|++.+.||+|+||.||+|.+.. ++..|++|++... ........+.+|..+++.++||||+++++++.. .
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 34679999999999999999999875 3678999987643 234556788999999999999999999997665 5
Q ss_pred ceEEEEEEeccCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeec
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL--------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDF 733 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~--------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDF 733 (1003)
...++++||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCC
Confidence 6789999999999999998653 35889999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001857 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 734 GLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYEL 813 (1003)
|+++....... . .......++..|+|||++.+..++.++|||||||++||+
T Consensus 162 g~~~~~~~~~~-----------~------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el 212 (280)
T cd05043 162 ALSRDLFPMDY-----------H------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWEL 212 (280)
T ss_pred CCcccccCCce-----------E------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHH
Confidence 99873111000 0 000123456789999999999899999999999999999
Q ss_pred Hh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 814 IV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 814 LT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
++ |++||...+..++...+.... .+ ..+..+++++.+++.+||..||.+|| ++.++++
T Consensus 213 ~~~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~~~~ 271 (280)
T cd05043 213 MTLGQTPYVEIDPFEMAAYLKDGY-RL-AQPINCPDELFAVMACCWALDPEERP---SFSQLVQ 271 (280)
T ss_pred hcCCCCCcCcCCHHHHHHHHHcCC-CC-CCCCcCCHHHHHHHHHHcCCChhhCC---CHHHHHH
Confidence 98 999999888777666555432 22 23456789999999999999999999 8888764
No 347
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.9e-37 Score=323.09 Aligned_cols=245 Identities=26% Similarity=0.445 Sum_probs=202.3
Q ss_pred EeeccCceEEEEEEECCCC------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 596 PISRGAFGRVFLAKKRTTG------DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~tg------k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
.||.|+||.||+|++.... +.||+|.+.+.. .......+.+|+.+++.++||||+++++++......|+|||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 5899999999999986544 689999886532 12345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC-----cEEEeecCCcc
Q 001857 670 YLNGGDLYSLLRNL-------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-----HIKLTDFGLSK 737 (1003)
Q Consensus 670 y~~GGSL~d~L~~~-------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-----~VKLiDFGLAk 737 (1003)
|++|++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++ .++|+|||+++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 99999999999642 3478899999999999999999999999999999999999887 89999999987
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-C
Q 001857 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-G 816 (1003)
Q Consensus 738 ~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-G 816 (1003)
..... . .........++..|+|||++.+..++.++|||||||++|+|++ |
T Consensus 160 ~~~~~--~---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g 210 (269)
T cd05044 160 DIYKS--D---------------------------YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLG 210 (269)
T ss_pred ccccc--c---------------------------ccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcC
Confidence 31100 0 0001122356788999999999889999999999999999998 9
Q ss_pred CCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 817 IPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 817 k~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
..||...+..+....+..... +..+..++..+.+||.+||+.+|.+|| ++.++++
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~i~~ 265 (269)
T cd05044 211 QQPYPALNNQEVLQHVTAGGR--LQKPENCPDKIYQLMTNCWAQDPSERP---TFDRIQE 265 (269)
T ss_pred CCCCcccCHHHHHHHHhcCCc--cCCcccchHHHHHHHHHHcCCCcccCC---CHHHHHH
Confidence 999988777776666544322 234567899999999999999999999 8888764
No 348
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.1e-37 Score=320.01 Aligned_cols=249 Identities=24% Similarity=0.322 Sum_probs=200.0
Q ss_pred EEeeccCceEEEEEEECC---CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeee-ccceEEEEEEe
Q 001857 595 KPISRGAFGRVFLAKKRT---TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFT-CRENLYLVMEY 670 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~---tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~-d~~~lyLVmEy 670 (1003)
+.||+|+||.||+|.+.. .+..||+|.+... ......+.+.+|..+++.++||||+++++.+. .....|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998753 3457999987542 23345577889999999999999999999765 45568999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 671 LNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 671 ~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
+.+|+|.+++.+. ..++...+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~----- 153 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY----- 153 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcc-----
Confidence 9999999999764 4567778888999999999999999999999999999999999999999999873110000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCChhhH
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEHPQQI 828 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~~ei 828 (1003)
..........+++.|+|||++.+..++.++|||||||++|||++ |.+||...+..++
T Consensus 154 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 211 (262)
T cd05058 154 ----------------------YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDI 211 (262)
T ss_pred ----------------------eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 00001123456788999999998889999999999999999999 5778887777776
Q ss_pred HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
...+..... +..+..++..+.+++.+||..+|.+|| ++.++++.
T Consensus 212 ~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp---~~~~il~~ 255 (262)
T cd05058 212 TVYLLQGRR--LLQPEYCPDPLYEVMLSCWHPKPEMRP---TFSELVSR 255 (262)
T ss_pred HHHHhcCCC--CCCCCcCCHHHHHHHHHHcCCChhhCC---CHHHHHHH
Confidence 666654432 234556789999999999999999999 88888764
No 349
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7.5e-37 Score=323.61 Aligned_cols=253 Identities=28% Similarity=0.425 Sum_probs=200.5
Q ss_pred CCeEEEEEeeccCceEEEEEEE----CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--cc
Q 001857 589 DDFEIIKPISRGAFGRVFLAKK----RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RE 662 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArd----k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d--~~ 662 (1003)
.+|++++.||+|+||.||+|.. ..++..||+|.+.... ....+.+.+|+.++..++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4699999999999999999984 4578899999986542 3445678899999999999999999987654 34
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
.+|+||||+++|+|.+++.+. +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 689999999999999999764 4689999999999999999999999999999999999999999999999999874110
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
. .. . ........++..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 161 ~-~~---------~------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 161 D-KE---------Y------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred C-Cc---------c------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence 0 00 0 000111234556999999998889999999999999999999877764
Q ss_pred CCChhh---------------HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 822 AEHPQQ---------------IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 822 ~~~~~e---------------i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
...... ....++.....+ ..+..++.++.+||.+||..+|.+|| |+.+|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ei~~ 278 (284)
T cd05081 213 SPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRL-PAPPGCPAEIYAIMKECWNNDPSQRP---SFSELAL 278 (284)
T ss_pred CcchhhhhhcccccccccchHHHHHHHhcCCcC-CCCCCCCHHHHHHHHHHccCChhhCC---CHHHHHH
Confidence 332110 011122222222 23467889999999999999999999 8998876
No 350
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.5e-37 Score=325.59 Aligned_cols=237 Identities=23% Similarity=0.389 Sum_probs=194.8
Q ss_pred EeeccCceEEEEEEECCCCC-------EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 596 PISRGAFGRVFLAKKRTTGD-------LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~tgk-------~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
.||.|+||.||+|.+..++. .||+|++.... ....+.+.+|..+++.++||||+++++++......|+||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 68999999999999865544 48888875432 344567888999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCc--------EEEeecCCcccc
Q 001857 669 EYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH--------IKLTDFGLSKVG 739 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~--------VKLiDFGLAk~~ 739 (1003)
||+++|+|..++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++. ++|+|||++...
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 9999999999997654 5899999999999999999999999999999999999987764 689999987621
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhC-C
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVG-I 817 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTG-k 817 (1003)
. ......|++.|+|||++.+ ..++.++|||||||++|+|++| .
T Consensus 159 ~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~ 203 (258)
T cd05078 159 L-----------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGD 203 (258)
T ss_pred C-----------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCC
Confidence 0 0113468889999999987 4579999999999999999998 5
Q ss_pred CCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 818 PPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 818 ~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
+||.......... +..... .++...+.++.+||.+||+.||.+|| +++++++.
T Consensus 204 ~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp---s~~~il~~ 256 (258)
T cd05078 204 KPLSALDSQKKLQ-FYEDRH---QLPAPKWTELANLINQCMDYEPDFRP---SFRAIIRD 256 (258)
T ss_pred CChhhccHHHHHH-HHHccc---cCCCCCcHHHHHHHHHHhccChhhCC---CHHHHHHh
Confidence 7777665544332 222222 34556778999999999999999999 89998864
No 351
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-38 Score=364.07 Aligned_cols=244 Identities=33% Similarity=0.542 Sum_probs=210.8
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeeccceEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~-L~HPNIVkL~~~f~d~~~ly 665 (1003)
..++|++...+|.|+||.|-.+.+..+++.+++|++.+.. ....+|..++.. -+||||+++++.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 3567999999999999999999999999999999998752 223346655544 47999999999999999999
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceee-cCCCcEEEeecCCccccccCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLI-AHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILL-d~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
+|||++.|+.|.+.+...+.+. ..+..|++||+.|+.|||++|||||||||+|||+ +..|+++|+|||.++...
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~---- 467 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE---- 467 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCc----
Confidence 9999999999999998876666 7888999999999999999999999999999999 689999999999987310
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
....+.|-|..|.|||++...+|+.+|||||||++||+||+|+.||....
T Consensus 468 ------------------------------~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P 517 (612)
T KOG0603|consen 468 ------------------------------RSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHP 517 (612)
T ss_pred ------------------------------hhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCC
Confidence 01234577889999999999999999999999999999999999997654
Q ss_pred hh-hHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 825 PQ-QIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 825 ~~-ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.. ++..+|... .+...+|.+++|||++||+.||.+|| ++.+++.||||
T Consensus 518 ~~~ei~~~i~~~-----~~s~~vS~~AKdLl~~LL~~dP~~Rl---~~~~i~~h~w~ 566 (612)
T KOG0603|consen 518 AGIEIHTRIQMP-----KFSECVSDEAKDLLQQLLQVDPALRL---GADEIGAHPWF 566 (612)
T ss_pred chHHHHHhhcCC-----ccccccCHHHHHHHHHhccCChhhCc---ChhhhccCcch
Confidence 44 566555433 33478999999999999999999999 99999999999
No 352
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9e-37 Score=321.11 Aligned_cols=247 Identities=25% Similarity=0.350 Sum_probs=194.6
Q ss_pred EEeeccCceEEEEEEEC--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEecc
Q 001857 595 KPISRGAFGRVFLAKKR--TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLN 672 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk--~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~ 672 (1003)
+.||+|+||.||+|... .++..+|+|.++.... ......+.+|+.+++.++||||+++++.+.+...+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 35899999999999864 3556799998865432 2333578889999999999999999999999999999999999
Q ss_pred CCChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 673 GGDLYSLLRNLG-----CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 673 GGSL~d~L~~~g-----~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
+|+|.+++.... .+++..+..++.|++.||+|||++||+||||||+||+++.++++||+|||+++..... .
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~--~-- 154 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE--D-- 154 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc--c--
Confidence 999999997532 3567788889999999999999999999999999999999999999999998631000 0
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-------CCCccceeechhHHHHHHHh-CCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-------GHGTTADWWSVGIILFELIV-GIPP 819 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-------~ys~kSDIWSLGVILYELLT-Gk~P 819 (1003)
.........|++.|+|||++.+. .++.++|||||||++|||++ |..|
T Consensus 155 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p 209 (269)
T cd05087 155 -------------------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQP 209 (269)
T ss_pred -------------------------eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCC
Confidence 00011235678899999998643 35789999999999999996 9999
Q ss_pred CCCCChhhHHHhhhcc-CC--CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 820 FNAEHPQQIFDNILNR-KI--PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 820 F~~~~~~ei~qkIl~~-~~--~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
|......+........ .. +.|.+....++.+.+++.+|+ .+|.+|| ++++|+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp---t~~~l~~ 265 (269)
T cd05087 210 YRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRP---SAEEVHL 265 (269)
T ss_pred CCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCC---CHHHHHH
Confidence 9876665554333222 11 222333457889999999999 5899999 8888764
No 353
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.6e-38 Score=361.43 Aligned_cols=253 Identities=25% Similarity=0.496 Sum_probs=219.2
Q ss_pred EEEEEeeccCceEEEEEEECCCCCEEEEEEeecccc-ccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce--EEEEE
Q 001857 592 EIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-IRKNAVESILAERDILISVRNPFVVRFFYSFTCREN--LYLVM 668 (1003)
Q Consensus 592 eIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i-~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~--lyLVm 668 (1003)
+.-.+||+|+|-+||+|.+..+|..||---++..+. ......+++..|+.+|+.|+||||+++|++|.+..+ +.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 445679999999999999999999998554443333 234567899999999999999999999999998765 88999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC--ceeccCCCcceeecC-CCcEEEeecCCccccccCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLR--VVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~G--IIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|++..|+|+.|+++.+.++...++.|++||+.||.|||++. |||||||-+||+|+. .|.|||+|+|||+..
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~------ 196 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL------ 196 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh------
Confidence 99999999999999999999999999999999999999985 999999999999986 599999999999851
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC-CCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN-AEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~-~~~ 824 (1003)
......+.+|||.|||||++. ..|+..+||||||++|.||.|+..||. ..+
T Consensus 197 ---------------------------r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n 248 (632)
T KOG0584|consen 197 ---------------------------RKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN 248 (632)
T ss_pred ---------------------------hccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC
Confidence 112234589999999999998 679999999999999999999999997 568
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
+.++|+++..+..|- .+..--.+++++||.+||.. ...|| ++.|||+||||..-
T Consensus 249 ~AQIYKKV~SGiKP~-sl~kV~dPevr~fIekCl~~-~~~R~---sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 249 PAQIYKKVTSGIKPA-ALSKVKDPEVREFIEKCLAT-KSERL---SAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHHHcCCCHH-HhhccCCHHHHHHHHHHhcC-chhcc---CHHHHhhChhhccc
Confidence 899999998876531 22233468999999999999 89999 99999999999853
No 354
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.5e-36 Score=318.22 Aligned_cols=252 Identities=30% Similarity=0.532 Sum_probs=210.3
Q ss_pred CeEEEEEeeccCceEEEEEEECC-CCCEEEEEEeecccc-------ccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeec
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRT-TGDLFAIKVLKKADM-------IRKNAVESILAERDILIS-VRNPFVVRFFYSFTC 660 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~-tgk~VALKVIkks~i-------~~~~~ie~~lrEi~IL~~-L~HPNIVkL~~~f~d 660 (1003)
+|++.+.||+|+||.||+|++.. +++.+|+|.+..... ........+.+|..++.. ++||||+++++.+..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 688999998864321 223445667788888865 799999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCC
Q 001857 661 RENLYLVMEYLNGGDLYSLLRN----LGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 661 ~~~lyLVmEy~~GGSL~d~L~~----~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
.+..|++|||++|++|.+++.. ...+++..++.++.|++.||.|||+ .||+|+||||+|||++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988743 3468999999999999999999996 7899999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT 815 (1003)
+...... .......|+..|+|||++.+..++.++|+||||+++|+|++
T Consensus 161 ~~~~~~~--------------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~ 208 (269)
T cd08528 161 AKQKQPE--------------------------------SKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT 208 (269)
T ss_pred eeecccc--------------------------------cccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence 8731000 01224568999999999998889999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|++||...+.......+...... +.....+++.+.+||.+||+.||.+|| ++.|+..+
T Consensus 209 g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rp---~~~e~~~~ 266 (269)
T cd08528 209 LQPPFYSTNMLSLATKIVEAVYE-PLPEGMYSEDVTDVITSCLTPDAEARP---DIIQVSAM 266 (269)
T ss_pred CCCcccccCHHHHHHHHhhccCC-cCCcccCCHHHHHHHHHHCCCCCccCC---CHHHHHHH
Confidence 99999887777666666554432 222236789999999999999999999 88887654
No 355
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.1e-36 Score=327.89 Aligned_cols=254 Identities=22% Similarity=0.346 Sum_probs=206.8
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk----~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
..++|++++.||+|+||.||+|.+..++. .||+|++.... .......+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 34679999999999999999999987776 46888876432 233345688999999999999999999988754
Q ss_pred eEEEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
..++++||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccC
Confidence 4689999999999999997653 689999999999999999999999999999999999999999999999999873110
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF 820 (1003)
.. .........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 162 ~~-----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~ 212 (303)
T cd05110 162 DE-----------------------------KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 212 (303)
T ss_pred cc-----------------------------cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 00 0001122456788999999999999999999999999999997 99999
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.+.........+.. ...++ .+..++..+.++|.+||..+|++|| ++.++++.
T Consensus 213 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~li~~c~~~~p~~Rp---~~~~l~~~ 264 (303)
T cd05110 213 DGIPTREIPDLLEK-GERLP-QPPICTIDVYMVMVKCWMIDADSRP---KFKELAAE 264 (303)
T ss_pred CCCCHHHHHHHHHC-CCCCC-CCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 88766555444433 22222 3456788999999999999999999 88888774
No 356
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=9.6e-37 Score=316.16 Aligned_cols=235 Identities=21% Similarity=0.314 Sum_probs=193.2
Q ss_pred EEeeccCceEEEEEEECCCC----------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 595 KPISRGAFGRVFLAKKRTTG----------DLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tg----------k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
+.||+|+||.||+|.+..++ ..+++|++..... ....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999998776 3577887654321 15778899999999999999999999888 778
Q ss_pred EEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC-------cEEEeecCCc
Q 001857 665 YLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-------HIKLTDFGLS 736 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-------~VKLiDFGLA 736 (1003)
|+||||+++|+|.+++...+ .++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 99999999999999998766 789999999999999999999999999999999999999887 8999999998
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC--CCCccceeechhHHHHHHH
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT--GHGTTADWWSVGIILFELI 814 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~--~ys~kSDIWSLGVILYELL 814 (1003)
.... ......++..|+|||++.+. .++.++|||||||++|+|+
T Consensus 156 ~~~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~ 200 (259)
T cd05037 156 ITVL-----------------------------------SREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEIC 200 (259)
T ss_pred cccc-----------------------------------cccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHH
Confidence 7310 01124567789999999876 7899999999999999999
Q ss_pred h-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 815 V-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 815 T-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
+ |..||...+.......... ... .+......+.+||.+||..+|.+|| ++.++++
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~il~ 256 (259)
T cd05037 201 SNGEEPLSTLSSSEKERFYQD-QHR---LPMPDCAELANLINQCWTYDPTKRP---SFRAILR 256 (259)
T ss_pred hCCCCCcccCCchhHHHHHhc-CCC---CCCCCchHHHHHHHHHhccChhhCC---CHHHHHH
Confidence 9 6888877654433333221 111 1222348999999999999999999 8888875
No 357
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.3e-36 Score=319.22 Aligned_cols=254 Identities=25% Similarity=0.389 Sum_probs=204.7
Q ss_pred CCeEEEEEeeccCceEEEEEEEC----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--cc
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKR----TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC--RE 662 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk----~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d--~~ 662 (1003)
.+|++++.||+|+||.||+|+.. .++..||+|++...... .....+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 56899999999999999999864 34789999998765432 356788999999999999999999998877 56
Q ss_pred eEEEEEEeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLG-CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~g-~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
..|+||||+++++|.+++.... .++...+..++.||+.||+|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 7999999999999999997754 689999999999999999999999999999999999999999999999999874110
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
. .. .........++..|+|||.+.+..++.++|||||||++|||++|..||.
T Consensus 162 ~-~~---------------------------~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 213 (284)
T cd05038 162 D-KD---------------------------YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213 (284)
T ss_pred C-Cc---------------------------ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcc
Confidence 0 00 0000112345567999999998889999999999999999999999986
Q ss_pred CCChhh--------------HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 822 AEHPQQ--------------IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 822 ~~~~~e--------------i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
...... .....+.....++ .+..++.++.+|+.+||..+|.+|| ++.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rp---t~~ei~~ 278 (284)
T cd05038 214 SPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP-RPPSCPDEVYDLMKLCWEAEPQDRP---SFADLIL 278 (284)
T ss_pred cccchhccccccccccccHHHHHHHHHcCCcCC-CCccCCHHHHHHHHHHhccChhhCC---CHHHHHH
Confidence 543211 1122222222222 3456789999999999999999999 8888875
No 358
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.3e-36 Score=318.78 Aligned_cols=252 Identities=21% Similarity=0.349 Sum_probs=205.5
Q ss_pred eEEEEEeeccCceEEEEEEEC---CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----
Q 001857 591 FEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE----- 662 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk---~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~----- 662 (1003)
|++.+.||+|+||.||+|.+. .+++.||||++.... ......+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 677889999999999999865 357899999986543 33445677889999999999999999999886532
Q ss_pred -eEEEEEEeccCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCC
Q 001857 663 -NLYLVMEYLNGGDLYSLLRNL------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 663 -~lyLVmEy~~GGSL~d~L~~~------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
..++++||+.+|+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 357899999999999887432 2478999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT 815 (1003)
++...... .........+++.|++||.+.+..++.++|||||||++|+|++
T Consensus 160 ~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~ 210 (273)
T cd05074 160 SKKIYSGD-----------------------------YYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMT 210 (273)
T ss_pred cccccCCc-----------------------------ceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhh
Confidence 87311000 0001112345678999999998889999999999999999999
Q ss_pred -CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 816 -GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 816 -Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|.+||.+.+...++..+..... ...+..++..+.+++.+||..+|.+|| ++.+++++
T Consensus 211 ~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~Rp---s~~~~~~~ 268 (273)
T cd05074 211 RGQTPYAGVENSEIYNYLIKGNR--LKQPPDCLEDVYELMCQCWSPEPKCRP---SFQHLRDQ 268 (273)
T ss_pred CCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCc---CHHHHHHH
Confidence 9999998887777776655432 223456889999999999999999999 88888764
No 359
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.9e-36 Score=319.66 Aligned_cols=238 Identities=20% Similarity=0.291 Sum_probs=192.7
Q ss_pred EEeeccCceEEEEEEECC------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 595 KPISRGAFGRVFLAKKRT------------TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~------------tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
+.||+|+||.||+|.... ....+|+|++.... ......+.+|..++..++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998532 22358888876532 334457788999999999999999999999999
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCc-------EEEeecC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH-------IKLTDFG 734 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~-------VKLiDFG 734 (1003)
..|+||||+++|+|..++... +.+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999999988754 56999999999999999999999999999999999999987664 8999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-cCCCCccceeechhHHHHHH
Q 001857 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-GTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 735 LAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-g~~ys~kSDIWSLGVILYEL 813 (1003)
++.... ......|+..|+|||++. +..++.++|||||||++|||
T Consensus 158 ~~~~~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el 202 (262)
T cd05077 158 IPITVL-----------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202 (262)
T ss_pred CCcccc-----------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHH
Confidence 886310 011346788999999987 46689999999999999999
Q ss_pred H-hCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 814 I-VGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 814 L-TGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
+ +|..||......+... +...... .....+.++.+||.+||+.||.+|| ++.+|+++
T Consensus 203 ~~~~~~p~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~li~~cl~~dp~~Rp---~~~~il~~ 260 (262)
T cd05077 203 CYNGEIPLKDKTLAEKER-FYEGQCM---LVTPSCKELADLMTHCMNYDPNQRP---FFRAIMRD 260 (262)
T ss_pred HhCCCCCCCCcchhHHHH-HHhcCcc---CCCCChHHHHHHHHHHcCCChhhCc---CHHHHHHh
Confidence 8 5899998765544322 2222221 2234568899999999999999999 89999875
No 360
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-36 Score=323.27 Aligned_cols=237 Identities=24% Similarity=0.341 Sum_probs=192.5
Q ss_pred EeeccCceEEEEEEECCC------------------------CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE
Q 001857 596 PISRGAFGRVFLAKKRTT------------------------GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV 651 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~t------------------------gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNI 651 (1003)
.||+|+||.||+|....+ ...||+|++.... ......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 589999999999975321 2358889876432 2344567889999999999999
Q ss_pred EEEEeeeeccceEEEEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC----
Q 001857 652 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---- 726 (1003)
Q Consensus 652 VkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---- 726 (1003)
+++++++......|+||||+++|+|..++.+ .+.+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999999875 46789999999999999999999999999999999999997644
Q ss_pred ---cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccce
Q 001857 727 ---HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTAD 802 (1003)
Q Consensus 727 ---~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSD 802 (1003)
.+||+|||++.... ......|++.|+|||++.+ ..++.++|
T Consensus 159 ~~~~~kl~d~g~~~~~~-----------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~~D 203 (274)
T cd05076 159 TSPFIKLSDPGVSFTAL-----------------------------------SREERVERIPWIAPECVPGGNSLSTAAD 203 (274)
T ss_pred ccceeeecCCccccccc-----------------------------------cccccccCCcccCchhhcCCCCCCcHHH
Confidence 48999999876210 0112357788999999876 56899999
Q ss_pred eechhHHHHHHH-hCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 803 WWSVGIILFELI-VGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 803 IWSLGVILYELL-TGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
||||||++|||+ +|..||......+.... ...... .+...++.+.++|.+||+.+|.+|| ++.+++++
T Consensus 204 v~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~il~~ 272 (274)
T cd05076 204 KWSFGTTLLEICFDGEVPLKERTPSEKERF-YEKKHR---LPEPSCKELATLISQCLTYEPTQRP---SFRTILRD 272 (274)
T ss_pred HHHHHHHHHHHHhCCCCCccccChHHHHHH-HHhccC---CCCCCChHHHHHHHHHcccChhhCc---CHHHHHHh
Confidence 999999999995 79999987766554332 222222 3345677899999999999999999 99999875
No 361
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3e-36 Score=318.13 Aligned_cols=246 Identities=20% Similarity=0.308 Sum_probs=195.1
Q ss_pred EeeccCceEEEEEEECCC--CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccC
Q 001857 596 PISRGAFGRVFLAKKRTT--GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 673 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~t--gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~G 673 (1003)
.||+|+||+||+|+.... ...+++|.+.... .....+.+.+|..+++.++||||+++++.+.+....|+||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 589999999999976433 2345666655432 233457889999999999999999999999999999999999999
Q ss_pred CChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 674 GDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 674 GSL~d~L~~~----g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
|+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~------- 152 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE------- 152 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc-------
Confidence 9999999754 34677788899999999999999999999999999999999999999999997631000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-------CCCCccceeechhHHHHHHHh-CCCCCC
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-------TGHGTTADWWSVGIILFELIV-GIPPFN 821 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-------~~ys~kSDIWSLGVILYELLT-Gk~PF~ 821 (1003)
.........+|++.|+|||++.. ..++.++|||||||++|||++ |.+||.
T Consensus 153 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 210 (268)
T cd05086 153 ----------------------DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS 210 (268)
T ss_pred ----------------------hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence 00011224678999999999853 235789999999999999996 678998
Q ss_pred CCChhhHHHhhhccCC---CCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 822 AEHPQQIFDNILNRKI---PWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~---~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.....+.+..+..... ..|.++..+++.+.++|..|| .+|.+|| ++.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp---~~~~i~~ 264 (268)
T cd05086 211 HLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRA---TAEEVHR 264 (268)
T ss_pred CCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCC---CHHHHHH
Confidence 7777776666554322 123445568899999999999 5799999 8888864
No 362
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5e-36 Score=322.45 Aligned_cols=256 Identities=14% Similarity=0.236 Sum_probs=191.8
Q ss_pred CCeEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHH--------HHHHHHHHHHHHhcCCCcEEEEEee
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNA--------VESILAERDILISVRNPFVVRFFYS 657 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~t---gk~VALKVIkks~i~~~~~--------ie~~lrEi~IL~~L~HPNIVkL~~~ 657 (1003)
++|++.+.||+|+||+||+|++..+ +..+|+|+........... ......+...+..++|++|++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999999877 6778888654322110000 0112233344566789999999987
Q ss_pred eeccc----eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeec
Q 001857 658 FTCRE----NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDF 733 (1003)
Q Consensus 658 f~d~~----~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDF 733 (1003)
+.... ..|++||++. .++.+.+......++..++.++.||+.||+|||++||+||||||+|||++.++.++|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 66543 4578888874 477777777666789999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001857 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 734 GLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYEL 813 (1003)
|+|+....+... . ...........||+.|+|||++.+..++.++|||||||++|||
T Consensus 171 Gla~~~~~~~~~-------------------~-----~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el 226 (294)
T PHA02882 171 GIASHFIIHGKH-------------------I-----EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKW 226 (294)
T ss_pred CCceeeccCCcc-------------------c-----ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999742111000 0 0000112345799999999999999999999999999999999
Q ss_pred HhCCCCCCCCCh-hh--------HHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 814 IVGIPPFNAEHP-QQ--------IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 814 LTGk~PF~~~~~-~e--------i~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
++|.+||.+... .. ...++...... ...+++++.+++..|+..+|.+|| +..+|++
T Consensus 227 ~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~rp---~~~~l~~ 291 (294)
T PHA02882 227 AGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK----IKNANKFIYDFIECVTKLSYEEKP---DYDALIK 291 (294)
T ss_pred HhCCCCCCccccchHHHHHhHHHHHHHhhhhhhc----cCCCCHHHHHHHHHHHhCCCCCCC---CHHHHHH
Confidence 999999987632 21 22333333222 235688999999999999999999 7777764
No 363
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-37 Score=323.06 Aligned_cols=262 Identities=27% Similarity=0.395 Sum_probs=215.2
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc----
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE---- 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~---- 662 (1003)
.-++|++.+.||+|||+.||+++...++..||+|.+.... .+..+..++|++..++++||||++++++...+.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 3467999999999999999999999999999999987654 456688999999999999999999987765443
Q ss_pred -eEEEEEEeccCCChHHHHHhc---C-CCCHHHHHHHHHHHHHHHHHHhhcC--ceeccCCCcceeecCCCcEEEeecCC
Q 001857 663 -NLYLVMEYLNGGDLYSLLRNL---G-CLDEDVARVYIAEVVLALEYLHSLR--VVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 663 -~lyLVmEy~~GGSL~d~L~~~---g-~L~Ee~ar~Ia~QIL~ALeYLHs~G--IIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
..||++.|...|+|.+.+.+. + .++|.++..|+.+|+.||++||+.. ++||||||.|||+.+.+.++|.|||.
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccC
Confidence 499999999999999998653 3 6999999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHH
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~kSDIWSLGVILYE 812 (1003)
+...... ..................|..|.|||.+.- ...+.++|||||||+||+
T Consensus 176 ~~~a~i~----------------------i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa 233 (302)
T KOG2345|consen 176 ATQAPIQ----------------------IEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYA 233 (302)
T ss_pred ccccceE----------------------eechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHH
Confidence 8741110 000111122233445568999999999864 445889999999999999
Q ss_pred HHhCCCCCCCC--ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 813 LIVGIPPFNAE--HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 813 LLTGk~PF~~~--~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
|+.|..||... ....+.-.+.+.++.+|+-.. +|+.+.+||+.||+.||.+|| ++.+++.+
T Consensus 234 ~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~-yse~l~~lik~mlqvdP~qRP---~i~~ll~~ 296 (302)
T KOG2345|consen 234 MMFGESPFERIYQQGGSLALAVQNAQISIPNSSR-YSEALHQLIKSMLQVDPNQRP---TIPELLSK 296 (302)
T ss_pred HHHcCCcchHHhhcCCeEEEeeeccccccCCCCC-ccHHHHHHHHHHhcCCcccCC---CHHHHHHH
Confidence 99999999532 122233455667777886544 999999999999999999999 89988875
No 364
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.8e-37 Score=362.27 Aligned_cols=252 Identities=29% Similarity=0.464 Sum_probs=217.4
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRT-----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC 660 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~-----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d 660 (1003)
+...+.+..+.||+|+||+||+|+... ....||||.++... ......+|.+|+++|..++|||||+|++++..
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 445678899999999999999998642 34689999998653 34466899999999999999999999999999
Q ss_pred cceEEEEEEeccCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC
Q 001857 661 RENLYLVMEYLNGGDLYSLLRNLG--------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG 726 (1003)
Q Consensus 661 ~~~lyLVmEy~~GGSL~d~L~~~g--------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG 726 (1003)
++.+|||+|||..|||.++|+... +++..+...++.||+.|++||-++.+|||||-.+|+||.++.
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL 640 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence 999999999999999999996431 278889999999999999999999999999999999999999
Q ss_pred cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccc-cccCCCCCCCchhhccCCCCccceeec
Q 001857 727 HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKR-SAVGTPDYLAPEILLGTGHGTTADWWS 805 (1003)
Q Consensus 727 ~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~-s~vGTp~YmAPEVL~g~~ys~kSDIWS 805 (1003)
.|||+||||++.. .+.+. ++.. ...-..+|||||.|+...|+.++||||
T Consensus 641 ~VKIsDfGLsRdi--YssDY----------------------------Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs 690 (774)
T KOG1026|consen 641 VVKISDFGLSRDI--YSSDY----------------------------YKVRGNTLLPIRWMPPESILYGKFTTESDVWS 690 (774)
T ss_pred EEEecccccchhh--hhhhh----------------------------hcccCCceeeeecCCHHHhhcCcccchhhhhh
Confidence 9999999999842 11111 1111 123356899999999999999999999
Q ss_pred hhHHHHHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 806 VGIILFELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 806 LGVILYELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
+||+|||+++ |+.||.+...+++++.|..+.. ...|+.++.++.+|+..||+.+|.+|| ++.||
T Consensus 691 ~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l--L~~Pe~CP~~vY~LM~~CW~~~P~~RP---sF~eI 755 (774)
T KOG1026|consen 691 FGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL--LSCPENCPTEVYSLMLECWNENPKRRP---SFKEI 755 (774)
T ss_pred hhhhhhhhhccccCcccccchHHHHHHHHcCCc--ccCCCCCCHHHHHHHHHHhhcCcccCC---CHHHH
Confidence 9999999997 9999999999999999998876 457899999999999999999999999 55544
No 365
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4e-37 Score=326.89 Aligned_cols=260 Identities=28% Similarity=0.511 Sum_probs=216.4
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~l 664 (1003)
..+++.+.+..||.|+-|.||+++.+.+|...|||.+.+.. ..+..++++..++++...+ .|+||+.|++|..+..+
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 34577888999999999999999999999999999998764 4556678888888876664 89999999999999999
Q ss_pred EEEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHh-hcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 665 YLVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLH-SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLH-s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
++.||.|.. -+..++++ .++++|..+-.+..-++.||.||- ++||||||+||+|||+|..|+|||||||++-.. .+
T Consensus 167 ~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrl-vd 244 (391)
T KOG0983|consen 167 FICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VD 244 (391)
T ss_pred HHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccccccee-ec
Confidence 999999843 34444443 378999999999999999999998 469999999999999999999999999998631 10
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~kSDIWSLGVILYELLTGk~P 819 (1003)
........|-+.|||||.+.- ..|+-.+||||||++++||.||..|
T Consensus 245 -------------------------------SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yP 293 (391)
T KOG0983|consen 245 -------------------------------SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYP 293 (391)
T ss_pred -------------------------------ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCC
Confidence 011233578999999999964 4589999999999999999999999
Q ss_pred CCCC-ChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 820 FNAE-HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 820 F~~~-~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
|.+. ...+++.+|++...+.......+|+.+.+|+..||++|+.+|| .-.++|+|||+...
T Consensus 294 y~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP---~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 294 YKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRP---KYNKLLEHPFIKRY 355 (391)
T ss_pred CCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCc---chHHHhcCcceeec
Confidence 9874 4566777888755433222345899999999999999999999 88999999999843
No 366
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.5e-37 Score=371.25 Aligned_cols=273 Identities=30% Similarity=0.480 Sum_probs=211.5
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-------
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC------- 660 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d------- 660 (1003)
+.+|+.++.||+||||.||+|+++-+|+.||||.|.... .......+.+|+.+|.+|+|||||++|.++.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 578999999999999999999999999999999987654 44556789999999999999999999843300
Q ss_pred --------------------------------------------------------------------------------
Q 001857 661 -------------------------------------------------------------------------------- 660 (1003)
Q Consensus 661 -------------------------------------------------------------------------------- 660 (1003)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------c--------ceEEEEEEeccCCChHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHhh
Q 001857 661 ------------------------R--------ENLYLVMEYLNGGDLYSLLRNLGCL-DEDVARVYIAEVVLALEYLHS 707 (1003)
Q Consensus 661 ------------------------~--------~~lyLVmEy~~GGSL~d~L~~~g~L-~Ee~ar~Ia~QIL~ALeYLHs 707 (1003)
+ ..+||-||||+.-.|.++++++... ....++.+++||+.||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 1268999999998888888776554 578899999999999999999
Q ss_pred cCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCC
Q 001857 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYL 787 (1003)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~Ym 787 (1003)
+|||||||||.||+++.+++|||+|||+|+.............. ..+..-|. .....++.+||..|+
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~-~~~~~~g~------------~~~~~Ts~VGTalYv 782 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLS-FSTNRAGS------------NDGDLTSQVGTALYV 782 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccC-ccccccCC------------CCcccccccceeeee
Confidence 99999999999999999999999999999841110000000000 00111111 112345689999999
Q ss_pred CchhhccCC---CCccceeechhHHHHHHHhCCCCCC-CCChhhHHHhhhccCCCCC-CCCCCCCHHHHHHHHhhccCCc
Q 001857 788 APEILLGTG---HGTTADWWSVGIILFELIVGIPPFN-AEHPQQIFDNILNRKIPWP-RVPEEMSPEAHDLIDRFLTEDP 862 (1003)
Q Consensus 788 APEVL~g~~---ys~kSDIWSLGVILYELLTGk~PF~-~~~~~ei~qkIl~~~~~~P-~lp~~iS~elkDLIrrcL~kDP 862 (1003)
|||++.+.. |+.|+|+||||+|++||+. ||. ......++.++.++..+.+ .+...--+....+|+.||++||
T Consensus 783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDP 859 (1351)
T ss_pred cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCC
Confidence 999998754 9999999999999999984 574 3444555666665555544 1233344567899999999999
Q ss_pred CCcCCCCCHHHHHcCCCCC
Q 001857 863 HQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 863 ~kRPg~~TAeELLqHPFFk 881 (1003)
.+|| ||.|+|++.||-
T Consensus 860 ~kRP---tA~eLL~s~llp 875 (1351)
T KOG1035|consen 860 SKRP---TATELLNSELLP 875 (1351)
T ss_pred ccCC---CHHHHhhccCCC
Confidence 9999 999999999997
No 367
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=351.85 Aligned_cols=258 Identities=20% Similarity=0.331 Sum_probs=214.4
Q ss_pred CCCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001857 582 SKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1003)
Q Consensus 582 sk~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~ 661 (1003)
..|.+..+++.+...||.|.||+||+|++-. .||||+++....... +.+.|++|+.++++-+|.||+=+.+++...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 4567777889999999999999999999843 499999988765444 889999999999999999999999999888
Q ss_pred ceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
.. .||+.+|.|.+|+.+++-. ..|.....+.|+.||++|+.|||.++|||||||..||++.+++.|||+||||+..-.
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred ce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 77 9999999999999999754 468899999999999999999999999999999999999999999999999987411
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGI 817 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~kSDIWSLGVILYELLTGk 817 (1003)
. + .+ ........|...|||||+++. .+|++.+|||||||++|||+||.
T Consensus 540 ~-----w----------~g--------------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~ 590 (678)
T KOG0193|consen 540 R-----W----------SG--------------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGE 590 (678)
T ss_pred e-----e----------cc--------------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCc
Confidence 0 0 00 011223457889999999974 56899999999999999999999
Q ss_pred CCCCCCChhhHHHhhhccC--CCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 818 PPFNAEHPQQIFDNILNRK--IPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 818 ~PF~~~~~~ei~qkIl~~~--~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.||...+.++++-++-.+. .........++.++++|+..||.+++++|| ...+||.
T Consensus 591 lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP---~F~~il~ 648 (678)
T KOG0193|consen 591 LPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERP---LFPQLLS 648 (678)
T ss_pred CCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCc---cHHHHHH
Confidence 9999766666655443331 122233456888999999999999999999 6666664
No 368
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-37 Score=336.15 Aligned_cols=254 Identities=30% Similarity=0.537 Sum_probs=208.3
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--C----cEEEEEeeeecc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN--P----FVVRFFYSFTCR 661 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H--P----NIVkL~~~f~d~ 661 (1003)
..+|++++.||+|.||+|..|.+..++..||||+++.- ....+..+-|+++|.++.+ | -+|++.++|.-.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 36799999999999999999999999999999998753 2344566779999999843 3 388899999999
Q ss_pred ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC---------------
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH--------------- 724 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~--------------- 724 (1003)
++.|||+|.+ |.++++++.++ .+++...++.+++||+.+++|||+.+++|.||||+|||+.+
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999998 66999999876 46899999999999999999999999999999999999842
Q ss_pred -----CCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCc
Q 001857 725 -----DGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGT 799 (1003)
Q Consensus 725 -----dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~ 799 (1003)
+-.|+|+|||.|++.. ....+.+.|..|.|||++++.+++.
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~----------------------------------e~hs~iVsTRHYRAPEViLgLGwS~ 288 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH----------------------------------EHHSTIVSTRHYRAPEVILGLGWSQ 288 (415)
T ss_pred eccCCCcceEEEecCCcceec----------------------------------cCcceeeeccccCCchheeccCcCC
Confidence 2358999999998511 1124578899999999999999999
Q ss_pred cceeechhHHHHHHHhCCCCCCCCChhh---HHHhhhc------------------cCCCCCCCC---------------
Q 001857 800 TADWWSVGIILFELIVGIPPFNAEHPQQ---IFDNILN------------------RKIPWPRVP--------------- 843 (1003)
Q Consensus 800 kSDIWSLGVILYELLTGk~PF~~~~~~e---i~qkIl~------------------~~~~~P~lp--------------- 843 (1003)
+|||||+||||+|+.+|...|+.....+ +.++|+. +...|++..
T Consensus 289 pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl 368 (415)
T KOG0671|consen 289 PCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPL 368 (415)
T ss_pred ccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccH
Confidence 9999999999999999999998766544 3333332 111122100
Q ss_pred -------CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 844 -------EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 844 -------~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
...-.++.|||++||..||.+|+ |+.|+|.||||+..
T Consensus 369 ~~~~~~~d~e~~~LfDLl~~mL~fDP~~Ri---Tl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 369 KKYMLQDDLEHVQLFDLLRRMLEFDPARRI---TLREALSHPFFARL 412 (415)
T ss_pred HHHhccCcHHHhHHHHHHHHHHccCccccc---cHHHHhcCHHhhcC
Confidence 00123589999999999999999 99999999999854
No 369
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=5.2e-35 Score=295.24 Aligned_cols=243 Identities=48% Similarity=0.850 Sum_probs=208.6
Q ss_pred CceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCChHHHH
Q 001857 601 AFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLL 680 (1003)
Q Consensus 601 ~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L 680 (1003)
+||.||+|.+..+++.+|+|++........ .+.+.+|+..++.++|+||+++++.+......+++|||+.+++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 689999999998899999999876543221 578889999999999999999999999999999999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCC
Q 001857 681 RNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGD 760 (1003)
Q Consensus 681 ~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~ 760 (1003)
.....++...+..++.+++.+|.|||+.||+|+||+|.||+++.++.++|+|||++......
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~------------------ 140 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG------------------ 140 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccc------------------
Confidence 87766999999999999999999999999999999999999999999999999998741100
Q ss_pred CCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCC-CChhhHHHhhhccCCCC
Q 001857 761 EEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA-EHPQQIFDNILNRKIPW 839 (1003)
Q Consensus 761 ~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~-~~~~ei~qkIl~~~~~~ 839 (1003)
.......|+..|++||.+.+..++.++||||||+++|+|++|..||.. .....+.+.+.......
T Consensus 141 --------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~ 206 (244)
T smart00220 141 --------------GLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF 206 (244)
T ss_pred --------------cccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC
Confidence 012345788999999999988899999999999999999999999987 56666666555444433
Q ss_pred CCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 840 PRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 840 P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
......++.++.+++.+||..+|.+|| ++.++++||||
T Consensus 207 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp---~~~~~~~~~~~ 244 (244)
T smart00220 207 PPPEWKISPEAKDLIRKLLVKDPEKRL---TAEEALQHPFF 244 (244)
T ss_pred ccccccCCHHHHHHHHHHccCCchhcc---CHHHHhhCCCC
Confidence 222222889999999999999999999 99999999997
No 370
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.1e-37 Score=329.26 Aligned_cols=263 Identities=30% Similarity=0.524 Sum_probs=207.7
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-cc
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTC-RE 662 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk----~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d-~~ 662 (1003)
+..|++++.||+|+||.||+|..++++. .||||.++...- .........+|+.+++.++||||+.|..+|-. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 4569999999999999999997655433 799998875421 12223567899999999999999999999988 77
Q ss_pred eEEEEEEeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC----CcEEEeec
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL-----GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD----GHIKLTDF 733 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~-----g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d----G~VKLiDF 733 (1003)
.++|++||.+. +|+.+|+-. ..++...++.++.||+.|+.|||++-|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 89999999977 999998533 469999999999999999999999999999999999999877 89999999
Q ss_pred CCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHH
Q 001857 734 GLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 734 GLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYE 812 (1003)
|+++... +... ........+-|.+|.|||.+.| ..|+.+.|+||+|||+.|
T Consensus 181 GlaR~~~-~plk---------------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE 232 (438)
T KOG0666|consen 181 GLARLFN-NPLK---------------------------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE 232 (438)
T ss_pred cHHHHhh-cccc---------------------------ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence 9999521 1000 0011234678999999999998 458999999999999999
Q ss_pred HHhCCCCCCCCC---------hhhHHHhhhccC-----CCCCC---CC--------------------------CCCCHH
Q 001857 813 LIVGIPPFNAEH---------PQQIFDNILNRK-----IPWPR---VP--------------------------EEMSPE 849 (1003)
Q Consensus 813 LLTGk~PF~~~~---------~~ei~qkIl~~~-----~~~P~---lp--------------------------~~iS~e 849 (1003)
|||-.+.|.+.. ..+...+|++-. ..||. +| ..-++.
T Consensus 233 lLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~ 312 (438)
T KOG0666|consen 233 LLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPS 312 (438)
T ss_pred HHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCch
Confidence 999999986532 122334444311 11221 11 113566
Q ss_pred HHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 850 AHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 850 lkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
+.+|+.+||++||.+|+ |+++.++|+||...
T Consensus 313 a~~LL~klL~yDP~kRI---ta~qAleh~yF~~d 343 (438)
T KOG0666|consen 313 ALDLLQKLLTYDPIKRI---TAEQALEHPYFTED 343 (438)
T ss_pred HHHHHHHHhccCchhhc---cHHHHhcccccccC
Confidence 99999999999999999 99999999999753
No 371
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=305.53 Aligned_cols=259 Identities=32% Similarity=0.548 Sum_probs=217.6
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
..|.-+++||+|.||+||+|+++.+++.||+|.++... ..+......++|+-+|+.++|.|||++++....+..+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 35777889999999999999999999999999987654 23334467889999999999999999999999999999999
Q ss_pred EeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
|||.. +|..+... ++.++.+.++.++.|++.||.|+|++++.|||+||.|+||+.+|.+||+|||+|+..-. .
T Consensus 81 e~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi-p---- 154 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI-P---- 154 (292)
T ss_pred HHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC-c----
Confidence 99965 88887765 47899999999999999999999999999999999999999999999999999983100 0
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHh-CCCCCCCCCh
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIV-GIPPFNAEHP 825 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLT-Gk~PF~~~~~ 825 (1003)
-+-....+-|.+|.+|.++.|. -|+...|+||.|||+.|+.. |++.|.+.+.
T Consensus 155 --------------------------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv 208 (292)
T KOG0662|consen 155 --------------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208 (292)
T ss_pred --------------------------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH
Confidence 0111235679999999999984 58999999999999999994 9999999998
Q ss_pred hhHHHhhhccC-----CCCCC------------CC---------CCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCC
Q 001857 826 QQIFDNILNRK-----IPWPR------------VP---------EEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVF 879 (1003)
Q Consensus 826 ~ei~qkIl~~~-----~~~P~------------lp---------~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPF 879 (1003)
.+...+|.... -.||. +| +.++..-+||++++|.-+|.+|+ +|++.++|||
T Consensus 209 ddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qri---saeaalqhpy 285 (292)
T KOG0662|consen 209 DDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRI---SAEAALQHPY 285 (292)
T ss_pred HHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCccccc---CHHHHhcCcc
Confidence 88888886521 11221 11 23456689999999999999999 9999999999
Q ss_pred CCCC
Q 001857 880 FKDI 883 (1003)
Q Consensus 880 Fk~I 883 (1003)
|.+.
T Consensus 286 f~d~ 289 (292)
T KOG0662|consen 286 FSDF 289 (292)
T ss_pred cccc
Confidence 9853
No 372
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-35 Score=327.48 Aligned_cols=251 Identities=29% Similarity=0.416 Sum_probs=196.5
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-eEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-NLY 665 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~-~ly 665 (1003)
..++|.--..||+|+||.||+|... +|..||||.+....... ...|.+|+.+|.+++|||+|+|+++|.+.+ ..+
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~ 148 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRL 148 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEE
Confidence 4467888899999999999999975 45899999776543221 345999999999999999999999999988 599
Q ss_pred EEEEeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---ceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 666 LVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLR---VVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~G---IIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
||+|||++|+|.+++.... .+++.....|+.+++.||+|||... ||||||||+|||||.+.+.||+|||+|+.+.
T Consensus 149 LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~ 228 (361)
T KOG1187|consen 149 LVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGP 228 (361)
T ss_pred EEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCC
Confidence 9999999999999998764 8999999999999999999999853 9999999999999999999999999997421
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccc-cCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSA-VGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~-vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~P 819 (1003)
.. . ....+. .||.+|+|||++.....+.++||||||++|.||+||+.|
T Consensus 229 ~~--~-----------------------------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~ 277 (361)
T KOG1187|consen 229 EG--D-----------------------------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKA 277 (361)
T ss_pred cc--c-----------------------------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcc
Confidence 10 0 001112 799999999999988899999999999999999999988
Q ss_pred CCCCC---h---hhHHHhhhccC-CC---CCCCC-CCCC--HH---HHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 820 FNAEH---P---QQIFDNILNRK-IP---WPRVP-EEMS--PE---AHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 820 F~~~~---~---~ei~qkIl~~~-~~---~P~lp-~~iS--~e---lkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
..... . .+.....+... .. =|.+. ...+ .+ +..+..+|++.+|..|| +..++.
T Consensus 278 ~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP---~m~~Vv 346 (361)
T KOG1187|consen 278 VDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERP---TMSQVV 346 (361)
T ss_pred cCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCc---CHHHHH
Confidence 86432 1 11111111111 10 01121 2233 23 55666799999999999 777753
No 373
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-35 Score=354.83 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=216.3
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCC-----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGD-----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk-----~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~ 661 (1003)
..+..++.+.||+|+||.||.|....-.. .||+|.+++. .+...+..|++|..+|+.++|||||++++++.+.
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 34568899999999999999999864322 4888887654 4566778999999999999999999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecC
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL-------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~-------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1003)
...+|++|||.||+|..+|++. ..++...+..++.+|+.|++||+++++|||||..+|+||+....|||+|||
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccc
Confidence 9999999999999999999876 348899999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhcccc-ccCCCCCCCchhhccCCCCccceeechhHHHHHH
Q 001857 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRS-AVGTPDYLAPEILLGTGHGTTADWWSVGIILFEL 813 (1003)
Q Consensus 735 LAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s-~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYEL 813 (1003)
+|+.. ...+. .+... ..-...|||||.+....++.++|||||||+|||+
T Consensus 848 lArDi--y~~~y----------------------------yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEi 897 (1025)
T KOG1095|consen 848 LARDI--YDKDY----------------------------YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEI 897 (1025)
T ss_pred hhHhh--hhchh----------------------------eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHH
Confidence 99831 11100 00001 1223579999999999999999999999999999
Q ss_pred Hh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 814 IV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 814 LT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
++ |..||.+.+..+++...+.+. .+ ..|..++..+.++|.+||+.+|++|| +...|++
T Consensus 898 fslG~~PY~~~~n~~v~~~~~~gg-RL-~~P~~CP~~ly~lM~~CW~~~pe~RP---~F~~i~~ 956 (1025)
T KOG1095|consen 898 FSLGATPYPSRSNFEVLLDVLEGG-RL-DPPSYCPEKLYQLMLQCWKHDPEDRP---SFRTIVE 956 (1025)
T ss_pred HhCCCCCCCCcchHHHHHHHHhCC-cc-CCCCCCChHHHHHHHHHccCChhhCc---cHHHHHh
Confidence 98 999999999999988777766 33 45789999999999999999999999 6777666
No 374
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=9.3e-35 Score=343.76 Aligned_cols=262 Identities=22% Similarity=0.330 Sum_probs=182.1
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECCC----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEee--
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTT----GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYS-- 657 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~t----gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~-- 657 (1003)
.....++|++.+.||+|+||.||+|++..+ +..||+|.+..... .+...+|. +....+.++..++..
T Consensus 127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e~--l~~~~~~~~~~~~~~~~ 199 (566)
T PLN03225 127 PSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNER--VRRACPNSCADFVYGFL 199 (566)
T ss_pred CCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHHH--HHhhchhhHHHHHHhhh
Confidence 345678999999999999999999999988 89999998764321 11111111 111222222222211
Q ss_pred ----eeccceEEEEEEeccCCChHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHhhcCceec
Q 001857 658 ----FTCRENLYLVMEYLNGGDLYSLLRNLGC--------------------LDEDVARVYIAEVVLALEYLHSLRVVHR 713 (1003)
Q Consensus 658 ----f~d~~~lyLVmEy~~GGSL~d~L~~~g~--------------------L~Ee~ar~Ia~QIL~ALeYLHs~GIIHR 713 (1003)
......+||||||+.+++|.+++..... ..+..++.++.||+.||+|||++|||||
T Consensus 200 ~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHR 279 (566)
T PLN03225 200 EPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHR 279 (566)
T ss_pred cccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 2445679999999999999999875421 1234567899999999999999999999
Q ss_pred cCCCcceeecC-CCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhh
Q 001857 714 DLKPDNLLIAH-DGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEIL 792 (1003)
Q Consensus 714 DIKPeNILLd~-dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL 792 (1003)
||||+|||++. ++.+||+|||+|+..... ........+||+.|||||++
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~------------------------------~~~~~~~~~~t~~Y~APE~~ 329 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVG------------------------------INYIPKEFLLDPRYAAPEQY 329 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccc------------------------------cccCCcccccCCCccChHHh
Confidence 99999999986 689999999999731000 00112356899999999976
Q ss_pred ccCC----------------------CCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh-ccCCCC----------
Q 001857 793 LGTG----------------------HGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL-NRKIPW---------- 839 (1003)
Q Consensus 793 ~g~~----------------------ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl-~~~~~~---------- 839 (1003)
.... ++.++|||||||+||||+++..|+... ...+..++ .....+
T Consensus 330 ~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~ 407 (566)
T PLN03225 330 IMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPR 407 (566)
T ss_pred hccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccc
Confidence 5322 344679999999999999977665432 11111111 111100
Q ss_pred --CC------CCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhH
Q 001857 840 --PR------VPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDT 887 (1003)
Q Consensus 840 --P~------lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~ 887 (1003)
+. +.......+.+||.+||++||.+|| |+.++|+||||.+..+..
T Consensus 408 ~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~---ta~e~L~Hpff~~~~~~~ 460 (566)
T PLN03225 408 ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI---SAKAALAHPYFDREGLLG 460 (566)
T ss_pred cchhhhhhhhhccccchHHHHHHHHHccCCcccCC---CHHHHhCCcCcCCCCccc
Confidence 00 0111234566999999999999999 999999999999877653
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=346.20 Aligned_cols=256 Identities=32% Similarity=0.554 Sum_probs=220.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec-----cc
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTC-----RE 662 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d-----~~ 662 (1003)
+-|+++.+||.|.+|.||+++++.+++..|+||+.... ...+.+..|.+||+.. +|||++.+|++|.. .+
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 55999999999999999999999999999999986542 2335667788898876 79999999999875 45
Q ss_pred eEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
.++||||||.||+..+++++. ..+.|+.+..|+++++.||.+||...+||||||-.|||++.+|.|||+|||++...
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl- 173 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL- 173 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee-
Confidence 799999999999999999865 56999999999999999999999999999999999999999999999999998631
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-----CCCCccceeechhHHHHHHHh
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-----TGHGTTADWWSVGIILFELIV 815 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~kSDIWSLGVILYELLT 815 (1003)
.....++.+.+|||.|||||++.. ..|+..+|+||||++..||..
T Consensus 174 ------------------------------dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIElad 223 (953)
T KOG0587|consen 174 ------------------------------DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAE 223 (953)
T ss_pred ------------------------------ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcC
Confidence 112346678999999999999964 347889999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
|.+|+.+..+...+-.|-....+-..-|..+++++.+||..||.+|-.+|| +..++++|||.++
T Consensus 224 G~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP---~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 224 GAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRP---STEELLKHPFITE 287 (953)
T ss_pred CCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCc---chhhhccCCcccc
Confidence 999999988876665554443322233678999999999999999999999 9999999999984
No 376
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=328.95 Aligned_cols=265 Identities=29% Similarity=0.487 Sum_probs=216.7
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc----cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-ce
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD----MIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-EN 663 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~----i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~-~~ 663 (1003)
++|-++.+||+|||+.||+|.+....++||||+-.... ....+..++..+|.+|.+.|+||.||++|++|.-+ +.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 56999999999999999999999999999999864322 23345678899999999999999999999999754 56
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc--CceeccCCCcceeecC---CCcEEEeecCCccc
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL--RVVHRDLKPDNLLIAH---DGHIKLTDFGLSKV 738 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~--GIIHRDIKPeNILLd~---dG~VKLiDFGLAk~ 738 (1003)
+|-|+|||+|.+|..+|+.+..+++.+++.|+.||+.||.||.+. .|||-||||.|||+-. .|.|||+||||+++
T Consensus 543 FCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 899999999999999999999999999999999999999999976 5999999999999954 58899999999996
Q ss_pred cccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc----CCCCccceeechhHHHHHHH
Q 001857 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG----TGHGTTADWWSVGIILFELI 814 (1003)
Q Consensus 739 ~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g----~~ys~kSDIWSLGVILYELL 814 (1003)
...++.+ ++ .....+....||.+|++||.+.- ...+.++||||+|||+|.++
T Consensus 623 MdddSy~-----~v-------------------dGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQCl 678 (775)
T KOG1151|consen 623 MDDDSYN-----SV-------------------DGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCL 678 (775)
T ss_pred ccCCccC-----cc-------------------cceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhh
Confidence 3222111 11 01123345789999999999863 23588999999999999999
Q ss_pred hCCCCCCCCCh-hhHHH--hhhc-cCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 815 VGIPPFNAEHP-QQIFD--NILN-RKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 815 TGk~PF~~~~~-~ei~q--kIl~-~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
.|+-||..... .++++ .|++ ....||.- +-++.++++||++||++.-++|. ++.++..||||-
T Consensus 679 YGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~---DV~qLA~dpyll 745 (775)
T KOG1151|consen 679 YGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRI---DVQQLACDPYLL 745 (775)
T ss_pred ccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhh---hHHHHccCcccc
Confidence 99999976432 22322 2222 33455543 35899999999999999999999 899999999985
No 377
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=325.87 Aligned_cols=152 Identities=28% Similarity=0.477 Sum_probs=133.2
Q ss_pred chhhhcccCCCCCCCCCCCcccC--CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHH
Q 001857 567 EDDVVRSLRTSPIHPSKDRTSID--DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILI 644 (1003)
Q Consensus 567 Eee~l~sl~~s~~~Psk~~~~ld--dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~ 644 (1003)
+++-...|..+.|+|+.++..+. +|.+.++||+|-|++||+|.+..+.++|||||.+... ...+..+.|+.+|+
T Consensus 54 eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~ 129 (590)
T KOG1290|consen 54 EQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQ 129 (590)
T ss_pred cccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHH
Confidence 44556788999999999998886 5999999999999999999999999999999998654 34566778999998
Q ss_pred hcC-----C---CcEEEEEeeeec----cceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhh-cC
Q 001857 645 SVR-----N---PFVVRFFYSFTC----RENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHS-LR 709 (1003)
Q Consensus 645 ~L~-----H---PNIVkL~~~f~d----~~~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs-~G 709 (1003)
+++ | .+||+|++.|.. ..++|||+|++ |-+|..+|.+. +.++...++.|++||+.||.|||+ +|
T Consensus 130 ~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg 208 (590)
T KOG1290|consen 130 QVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG 208 (590)
T ss_pred HHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 873 3 379999999975 45899999999 77999999765 679999999999999999999995 69
Q ss_pred ceeccCCCcceeec
Q 001857 710 VVHRDLKPDNLLIA 723 (1003)
Q Consensus 710 IIHRDIKPeNILLd 723 (1003)
|||.||||+|||+-
T Consensus 209 IIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 209 IIHTDLKPENVLLC 222 (590)
T ss_pred ccccCCCcceeeee
Confidence 99999999999994
No 378
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.8e-35 Score=331.63 Aligned_cols=264 Identities=29% Similarity=0.496 Sum_probs=219.5
Q ss_pred CCCCCCCCcccCC-eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC------Cc
Q 001857 578 PIHPSKDRTSIDD-FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN------PF 650 (1003)
Q Consensus 578 ~~~Psk~~~~ldd-YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H------PN 650 (1003)
.|+....+..++. |.+....|+|-||+|..|.+..-|..||||||...... .+.=+.|++||++|+. -|
T Consensus 420 GYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~H 495 (752)
T KOG0670|consen 420 GYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKFH 495 (752)
T ss_pred ceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhhH
Confidence 4666677777765 99999999999999999999999999999999875432 2344679999999963 48
Q ss_pred EEEEEeeeeccceEEEEEEeccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC-C
Q 001857 651 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG---CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-G 726 (1003)
Q Consensus 651 IVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g---~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G 726 (1003)
+++|+-.|...+++|||+|.+. .+|.+++++.| .|....++.|+.||..||..|-.+||+|.||||+|||++.. .
T Consensus 496 clrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 496 CLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence 9999999999999999999985 59999999876 48889999999999999999999999999999999999975 5
Q ss_pred cEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeech
Q 001857 727 HIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSV 806 (1003)
Q Consensus 727 ~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSL 806 (1003)
.+||||||.|.....+ .+ ..+.-+..|.|||++.|.+|++..|+||+
T Consensus 575 iLKLCDfGSA~~~~en---------------------ei------------tPYLVSRFYRaPEIiLG~~yd~~iD~WSv 621 (752)
T KOG0670|consen 575 ILKLCDFGSASFASEN---------------------EI------------TPYLVSRFYRAPEIILGLPYDYPIDTWSV 621 (752)
T ss_pred eeeeccCccccccccc---------------------cc------------cHHHHHHhccCcceeecCcccCCccceee
Confidence 6899999998741110 01 11234556999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCC---------------------------------------------
Q 001857 807 GIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPR--------------------------------------------- 841 (1003)
Q Consensus 807 GVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~--------------------------------------------- 841 (1003)
||+||||.||+..|.+.+..+++.-.+..+.+||.
T Consensus 622 gctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl 701 (752)
T KOG0670|consen 622 GCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDL 701 (752)
T ss_pred ceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhH
Confidence 99999999999999998888877766664444443
Q ss_pred ---------CCC---CCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 842 ---------VPE---EMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 842 ---------lp~---~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
+|. .+-..+++||.+||..||++|+ ++.++|+||||..
T Consensus 702 ~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRi---t~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 702 GSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRI---TVNQALKHPFITE 751 (752)
T ss_pred HHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcC---CHHHHhcCCcccC
Confidence 000 0114699999999999999999 9999999999974
No 379
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=337.28 Aligned_cols=243 Identities=32% Similarity=0.466 Sum_probs=194.5
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc------
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE------ 662 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~------ 662 (1003)
.-|..-+.||+||||.||+++++.+|+.||||++++.. .....+...+|+++|++++|||||+++++-++..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 34777889999999999999999999999999998754 3344577889999999999999999998766554
Q ss_pred eEEEEEEeccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC--CC--cEEEeecCC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL---GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH--DG--HIKLTDFGL 735 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~---g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~--dG--~VKLiDFGL 735 (1003)
...+|||||.||+|+..+.+. ..|++.....++..++.||.|||++|||||||||.||++-. +| .-||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 467999999999999999653 56999999999999999999999999999999999999853 34 369999999
Q ss_pred ccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHH
Q 001857 736 SKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELI 814 (1003)
Q Consensus 736 Ak~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELL 814 (1003)
|+... .+....+.+||+.|++||++.. ..|+..+|.|||||++|++.
T Consensus 171 Arel~--------------------------------d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca 218 (732)
T KOG4250|consen 171 ARELD--------------------------------DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA 218 (732)
T ss_pred cccCC--------------------------------CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence 98411 1124567899999999999985 77999999999999999999
Q ss_pred hCCCCCCCC----ChhhHHHhhhccCC-------------------CCCCCCCCCCHH----HHHHHHhhccCCcCCcC
Q 001857 815 VGIPPFNAE----HPQQIFDNILNRKI-------------------PWPRVPEEMSPE----AHDLIDRFLTEDPHQRL 866 (1003)
Q Consensus 815 TGk~PF~~~----~~~ei~qkIl~~~~-------------------~~P~lp~~iS~e----lkDLIrrcL~kDP~kRP 866 (1003)
||..||... +..++...+..++. .+| +|..+++. +...+..+|..+|.+|.
T Consensus 219 TG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP-~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 219 TGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLP-QPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred ccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCC-CcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 999999532 12223223322111 122 23444443 45567789999999998
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-36 Score=314.77 Aligned_cols=262 Identities=29% Similarity=0.474 Sum_probs=211.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-------
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR------- 661 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~------- 661 (1003)
+.|+-+.+||+|.||.||+|+.+.+|+.||+|++-... .....-...++|+++|..++|+|++.+++.+...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 45888899999999999999999999999998654322 1222335678999999999999999998776542
Q ss_pred -ceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccc
Q 001857 662 -ENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1003)
Q Consensus 662 -~~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1003)
..+||||.+|.. +|+.++.+. .+++...++.++.+++.||.|+|+..|+|||+||+|+||+.+|.+||+|||+++..
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 348999999976 999999766 67999999999999999999999999999999999999999999999999999742
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCC
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~ 818 (1003)
..... .........+-|.+|++||.+.| ..|+++.|||+.||||.||.|+.+
T Consensus 175 s~~~n---------------------------~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrsp 227 (376)
T KOG0669|consen 175 STSKN---------------------------VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSP 227 (376)
T ss_pred ecccc---------------------------cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCc
Confidence 11100 00112345688999999999997 568999999999999999999999
Q ss_pred CCCCCChhhHHHhhhccC-----CCCCC--------------CCC-------------CCCHHHHHHHHhhccCCcCCcC
Q 001857 819 PFNAEHPQQIFDNILNRK-----IPWPR--------------VPE-------------EMSPEAHDLIDRFLTEDPHQRL 866 (1003)
Q Consensus 819 PF~~~~~~ei~qkIl~~~-----~~~P~--------------lp~-------------~iS~elkDLIrrcL~kDP~kRP 866 (1003)
-|.+.+..+.+..|.... --||. ++. .-.+++.||+.+||..||.+|+
T Consensus 228 imqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~ 307 (376)
T KOG0669|consen 228 IMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRI 307 (376)
T ss_pred cccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCc
Confidence 999888776665553311 11221 111 1246899999999999999999
Q ss_pred CCCCHHHHHcCCCCCC
Q 001857 867 GSGGASEVKQHVFFKD 882 (1003)
Q Consensus 867 g~~TAeELLqHPFFk~ 882 (1003)
+++++++|.||..
T Consensus 308 ---~ad~alnh~~F~k 320 (376)
T KOG0669|consen 308 ---DADQALNHDFFWK 320 (376)
T ss_pred ---chHhhhchhhhhc
Confidence 9999999999963
No 381
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.4e-33 Score=322.44 Aligned_cols=264 Identities=22% Similarity=0.333 Sum_probs=190.8
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEEC----------------CCCCEEEEEEeeccccccH-----------HHHHHHH
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKR----------------TTGDLFAIKVLKKADMIRK-----------NAVESIL 637 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk----------------~tgk~VALKVIkks~i~~~-----------~~ie~~l 637 (1003)
+...++|++.++||+|+||+||+|... ..++.||||.+........ ...+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 346789999999999999999999752 2456799999864321100 0112334
Q ss_pred HHHHHHHhcCCCcE-----EEEEeeeec--------cceEEEEEEeccCCChHHHHHhcC--------------------
Q 001857 638 AERDILISVRNPFV-----VRFFYSFTC--------RENLYLVMEYLNGGDLYSLLRNLG-------------------- 684 (1003)
Q Consensus 638 rEi~IL~~L~HPNI-----VkL~~~f~d--------~~~lyLVmEy~~GGSL~d~L~~~g-------------------- 684 (1003)
.|..++.+++|.++ ++++++|.. ....||||||+++++|.+++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 56777777776654 556665543 356899999999999999986421
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCC
Q 001857 685 ----CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGD 760 (1003)
Q Consensus 685 ----~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~ 760 (1003)
.++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~-~---------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTG-I---------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccC-C----------------
Confidence 2345678889999999999999999999999999999999999999999998631000 0
Q ss_pred CCccchhhhhhhhhhccccccCCCCCCCchhhccCC--------------------CC--ccceeechhHHHHHHHhCCC
Q 001857 761 EEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG--------------------HG--TTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 761 ~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~--------------------ys--~kSDIWSLGVILYELLTGk~ 818 (1003)
........+|+.|+|||++.... |+ .+.||||+||++|+|++|..
T Consensus 364 -------------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l 430 (507)
T PLN03224 364 -------------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPEL 430 (507)
T ss_pred -------------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCC
Confidence 00111234589999999986432 22 24799999999999999875
Q ss_pred -CCCCCC-----------hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCc---CCcCCCCCHHHHHcCCCCCC
Q 001857 819 -PFNAEH-----------PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDP---HQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 819 -PF~~~~-----------~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP---~kRPg~~TAeELLqHPFFk~ 882 (1003)
||.... ....+..+......++ .....++.++|||.+||.++| .+|+ |+.|+|+||||..
T Consensus 431 ~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~Rl---Sa~eaL~Hp~f~~ 505 (507)
T PLN03224 431 RPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS-LLDRNKEAGWDLACKLITKRDQANRGRL---SVGQALSHRFFLP 505 (507)
T ss_pred CCccchhhhhhHHhhccchHHHHHhhcccCCCcc-cccccChHHHHHHHHHhccCCCCcccCC---CHHHHhCCCCcCC
Confidence 775321 1112222233344443 345689999999999999876 6899 9999999999963
No 382
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=306.88 Aligned_cols=278 Identities=26% Similarity=0.442 Sum_probs=219.6
Q ss_pred chhhhcccCCCCC-CCC---CCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHH
Q 001857 567 EDDVVRSLRTSPI-HPS---KDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDI 642 (1003)
Q Consensus 567 Eee~l~sl~~s~~-~Ps---k~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~I 642 (1003)
+++.++++.++.. .|. -..+..++.+-+..||.|+||+|++-.++.+|+..|||.+..... .....+++.|.+.
T Consensus 38 ~~~~lr~~s~g~l~~p~~~~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~ 115 (361)
T KOG1006|consen 38 EEERLRSYSTGTLKLPDDAHLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDT 115 (361)
T ss_pred hHHHHHHhccCceecCCcccccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHH
Confidence 4556666655432 111 123444567788899999999999999999999999999987653 3445677788776
Q ss_pred H-HhcCCCcEEEEEeeeeccceEEEEEEeccCCChHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccC
Q 001857 643 L-ISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLR-----NLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDL 715 (1003)
Q Consensus 643 L-~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~-----~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDI 715 (1003)
. +.-+.||||++|++...++..+|.||+|.- +|..+.+ ....++|..+-.+..-.+.||+||-+ ..||||||
T Consensus 116 ~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDv 194 (361)
T KOG1006|consen 116 VMKSSNCPNIVKFYGALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDV 194 (361)
T ss_pred HHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccC
Confidence 5 455789999999999999999999999954 6654432 23579999999999999999999985 68999999
Q ss_pred CCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-
Q 001857 716 KPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG- 794 (1003)
Q Consensus 716 KPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g- 794 (1003)
||+|||++..|.|||||||++-.. ........-.|-..|||||.+..
T Consensus 195 KPSNILldr~G~vKLCDFGIcGqL--------------------------------v~SiAkT~daGCrpYmAPERi~p~ 242 (361)
T KOG1006|consen 195 KPSNILLDRHGDVKLCDFGICGQL--------------------------------VDSIAKTVDAGCRPYMAPERIDPS 242 (361)
T ss_pred ChhheEEecCCCEeeecccchHhH--------------------------------HHHHHhhhccCCccccChhccCCc
Confidence 999999999999999999997520 11122334578889999999964
Q ss_pred -CCCCccceeechhHHHHHHHhCCCCCCCCC-hhhHHHhhhccCCCCCCCCC---CCCHHHHHHHHhhccCCcCCcCCCC
Q 001857 795 -TGHGTTADWWSVGIILFELIVGIPPFNAEH-PQQIFDNILNRKIPWPRVPE---EMSPEAHDLIDRFLTEDPHQRLGSG 869 (1003)
Q Consensus 795 -~~ys~kSDIWSLGVILYELLTGk~PF~~~~-~~ei~qkIl~~~~~~P~lp~---~iS~elkDLIrrcL~kDP~kRPg~~ 869 (1003)
.+|+-++|+||||++|||+.||..||..-+ ..+.+.++..+..+....+. +++..+..||.-||.+|-..||
T Consensus 243 ~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rp--- 319 (361)
T KOG1006|consen 243 DKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRP--- 319 (361)
T ss_pred cCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCc---
Confidence 568999999999999999999999997543 44455556666654333333 4899999999999999999999
Q ss_pred CHHHHHcCCCCCC
Q 001857 870 GASEVKQHVFFKD 882 (1003)
Q Consensus 870 TAeELLqHPFFk~ 882 (1003)
...+++++||++.
T Consensus 320 ky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 320 KYDDLKKFPFYRM 332 (361)
T ss_pred chhhhhcCchhhh
Confidence 8899999999974
No 383
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-33 Score=315.11 Aligned_cols=251 Identities=23% Similarity=0.381 Sum_probs=214.5
Q ss_pred CCCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001857 582 SKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1003)
Q Consensus 582 sk~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~ 661 (1003)
-+|.....+..+..+||-|.||.||.+.++.....||||.++... -.++.|+.|..+|+.++|||+|+|+++|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----MeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc----hhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 355555667888999999999999999999999999999987543 3678999999999999999999999999999
Q ss_pred ceEEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccc
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1003)
..+|||+|||..|+|.++|++. ..++.-.+..++.||..|++||..+++|||||...|.|+..+..||++||||+++.
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 9999999999999999999865 34666677777889999999999999999999999999999999999999999962
Q ss_pred ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCC
Q 001857 740 LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIP 818 (1003)
Q Consensus 740 ~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~ 818 (1003)
..+... .....--...|.|||-+....++.++|||+|||+|||+.| |..
T Consensus 416 tgDTYT------------------------------AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMs 465 (1157)
T KOG4278|consen 416 TGDTYT------------------------------AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMS 465 (1157)
T ss_pred cCCcee------------------------------cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCC
Confidence 211110 0111223457999999999999999999999999999997 999
Q ss_pred CCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC
Q 001857 819 PFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1003)
Q Consensus 819 PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~ 868 (1003)
||.+.+..++|.-+-+ .+.+ .-|++|++....|++.||++.|.+||.+
T Consensus 466 PYPGidlSqVY~LLEk-gyRM-~~PeGCPpkVYeLMraCW~WsPsDRPsF 513 (1157)
T KOG4278|consen 466 PYPGIDLSQVYGLLEK-GYRM-DGPEGCPPKVYELMRACWNWSPSDRPSF 513 (1157)
T ss_pred CCCCccHHHHHHHHhc-cccc-cCCCCCCHHHHHHHHHHhcCCcccCccH
Confidence 9999999888866544 4443 4578999999999999999999999944
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=333.10 Aligned_cols=276 Identities=40% Similarity=0.751 Sum_probs=244.3
Q ss_pred EeeccCceEEEEEEE---CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEEEEEec
Q 001857 596 PISRGAFGRVFLAKK---RTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVMEYL 671 (1003)
Q Consensus 596 ~LG~G~FGtVyLArd---k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyLVmEy~ 671 (1003)
++|.|+||.|++++. ...|..||+|++++......... +...|..++..++ ||++|++++.|+.+..+|++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999999875 34677899999988765544443 6778999999987 999999999999999999999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCC
Q 001857 672 NGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPA 751 (1003)
Q Consensus 672 ~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~ 751 (1003)
.||+|+..+.....+.+...++|.++++.|++++|+.||+|||+|++||+++.+|++++.|||+++....
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~---------- 149 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK---------- 149 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999984110
Q ss_pred ccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHh
Q 001857 752 VSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDN 831 (1003)
Q Consensus 752 ~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qk 831 (1003)
....|||..|||||++. ++...+||||||+++|||+||..||.. ++..+
T Consensus 150 -------------------------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~ 198 (612)
T KOG0603|consen 150 -------------------------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKR 198 (612)
T ss_pred -------------------------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHH
Confidence 01129999999999998 788999999999999999999999988 77788
Q ss_pred hhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC--CCHHHHHcCCCCCCCChhHHhhh--cCCccCCCCCCCCCCC
Q 001857 832 ILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPTSESALDTSY 907 (1003)
Q Consensus 832 Il~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~--~TAeELLqHPFFk~Idwd~L~~~--k~pfvP~~~s~lDts~ 907 (1003)
|+..+..+ |..++..++++++.++.++|..|++. ..+.|+++|+||..++|+.+..+ +++|.|......|+.+
T Consensus 199 Il~~~~~~---p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~ 275 (612)
T KOG0603|consen 199 ILKAELEM---PRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQ 275 (612)
T ss_pred HhhhccCC---chhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhh
Confidence 88876554 56899999999999999999999997 48899999999999999988765 5899999999999999
Q ss_pred cccccccCC
Q 001857 908 FTSRYSWNT 916 (1003)
Q Consensus 908 F~s~~s~~~ 916 (1003)
|+..|+..+
T Consensus 276 fd~eft~~~ 284 (612)
T KOG0603|consen 276 FDPEFTSQV 284 (612)
T ss_pred cCchhccCC
Confidence 998776544
No 385
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-33 Score=317.17 Aligned_cols=247 Identities=24% Similarity=0.381 Sum_probs=206.3
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCC----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTT----GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~t----gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~ 662 (1003)
.-+...+.+.||.|-||.||.|....- .--||||+.+.... .+..+.|+.|..+|+.++||||++|++++.+ .
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfdHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q 463 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence 334566678999999999999987432 23589999876442 2336889999999999999999999999875 4
Q ss_pred eEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
.++||||+++-|.|..+++.+ ..++......|+.||+.||.|||+..+|||||..+|||+.....|||+|||+++...-
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 689999999999999999866 5699999999999999999999999999999999999999999999999999984210
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPF 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF 820 (1003)
. ...+.....-...|||||.+.-..++.++|||.|||+|||+|. |.-||
T Consensus 544 ~------------------------------~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPf 593 (974)
T KOG4257|consen 544 D------------------------------AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPF 593 (974)
T ss_pred c------------------------------chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcc
Confidence 0 0011111223457999999999999999999999999999996 99999
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~ 868 (1003)
.+-...+++..|-++.. +..|+.+++.+..|+.+||+++|.+||.+
T Consensus 594 qgvkNsDVI~~iEnGeR--lP~P~nCPp~LYslmskcWayeP~kRPrf 639 (974)
T KOG4257|consen 594 QGVKNSDVIGHIENGER--LPCPPNCPPALYSLMSKCWAYEPSKRPRF 639 (974)
T ss_pred ccccccceEEEecCCCC--CCCCCCCChHHHHHHHHHhccCcccCCcH
Confidence 99888888877766543 44688999999999999999999999954
No 386
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-33 Score=319.71 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=211.7
Q ss_pred cCCeEEEEEeeccCceEEEEEEECC-CCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRT-TGD--LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~-tgk--~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
.++..++++||+|.||.|+.|.|.. +|+ .||||+++...... ....|++|+.+|.+|+|||+++||++..+ ..+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 3567888999999999999999864 333 68999998654432 67899999999999999999999999887 778
Q ss_pred EEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 665 YLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
.||||++++|+|.+.|++. ..|....+..|+.||+.|+.||.++++|||||-..|||+.....|||+||||.+..-.+
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 9999999999999999873 56889999999999999999999999999999999999999999999999998841110
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~ 821 (1003)
. ....+ ....--...|+|||.|....++.++|+|++||+||||++ |.-||.
T Consensus 266 -e----------------d~Yvm-----------~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~ 317 (1039)
T KOG0199|consen 266 -E----------------DMYVM-----------APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV 317 (1039)
T ss_pred -C----------------cceEe-----------cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC
Confidence 0 00000 111223457999999999999999999999999999997 899999
Q ss_pred CCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHH
Q 001857 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVK 875 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELL 875 (1003)
+....+++++|-.+. .++ -|..+++.+.+++..||+.+|.+|| ++..|.
T Consensus 318 G~~g~qIL~~iD~~e-rLp-RPk~csedIY~imk~cWah~paDRp---tFsair 366 (1039)
T KOG0199|consen 318 GCRGIQILKNIDAGE-RLP-RPKYCSEDIYQIMKNCWAHNPADRP---TFSAIR 366 (1039)
T ss_pred CCCHHHHHHhccccc-cCC-CCCCChHHHHHHHHHhccCCccccc---cHHHHH
Confidence 999999999987433 333 4788999999999999999999999 555554
No 387
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.98 E-value=5.2e-33 Score=300.97 Aligned_cols=257 Identities=28% Similarity=0.478 Sum_probs=211.9
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc----
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE---- 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~---- 662 (1003)
...+|.-++.+|.|+- .|..|-+.-+++.||+|.+.... ......++..+|..++..++|+||++++.+|.-..
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence 3457999999999998 88889898899999999887663 23334577889999999999999999999997643
Q ss_pred --eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 663 --NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 663 --~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
.+|+|||||.. +|.+.+. -.++-+.++.++.|+++|+.|||+.||+||||||+||++..++.+||.|||+|+...
T Consensus 93 ~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~ 169 (369)
T KOG0665|consen 93 FQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED 169 (369)
T ss_pred HHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence 58999999965 9999887 347888999999999999999999999999999999999999999999999998310
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
. ......++.|..|.|||++.+.+|...+||||+||++.||++|+..|
T Consensus 170 ~--------------------------------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf 217 (369)
T KOG0665|consen 170 T--------------------------------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF 217 (369)
T ss_pred c--------------------------------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence 0 01234578999999999999999999999999999999999999999
Q ss_pred CCCChhhHHHhhhccC---------------------------CC----CCC--C------CCCCCHHHHHHHHhhccCC
Q 001857 821 NAEHPQQIFDNILNRK---------------------------IP----WPR--V------PEEMSPEAHDLIDRFLTED 861 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~---------------------------~~----~P~--l------p~~iS~elkDLIrrcL~kD 861 (1003)
.+.+.-+.+.++.... .. +|. + +..-+..++|++.+||..|
T Consensus 218 ~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~ 297 (369)
T KOG0665|consen 218 PGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID 297 (369)
T ss_pred cCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC
Confidence 8876555554443310 00 111 0 0112456999999999999
Q ss_pred cCCcCCCCCHHHHHcCCCCCCCCh
Q 001857 862 PHQRLGSGGASEVKQHVFFKDINW 885 (1003)
Q Consensus 862 P~kRPg~~TAeELLqHPFFk~Idw 885 (1003)
|++|. +++++|+||||+ -|
T Consensus 298 pe~Ri---sv~daL~HPY~~--vw 316 (369)
T KOG0665|consen 298 PEKRI---SVDDALRHPYIK--VW 316 (369)
T ss_pred hhhcc---cHHHHhcCCeee--ee
Confidence 99999 999999999998 46
No 388
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.98 E-value=3.1e-32 Score=337.62 Aligned_cols=240 Identities=25% Similarity=0.347 Sum_probs=188.2
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
..|...+.||+|+||.||+|+++.++..||+|.+...... ...|+.++++++|||||++++++.+.+..|+||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 4567778999999999999999999999999988654321 124578899999999999999999999999999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh---hcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLH---SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLH---s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
||++||+|.++++. +++.....++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 763 Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~----- 833 (968)
T PLN00113 763 EYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC----- 833 (968)
T ss_pred eCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc-----
Confidence 99999999999964 788999999999999999999 6799999999999999998888775 66543100
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
......||+.|||||++.+..|+.++|||||||++|||++|+.||.....
T Consensus 834 ------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~ 883 (968)
T PLN00113 834 ------------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG 883 (968)
T ss_pred ------------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC
Confidence 01123689999999999999999999999999999999999999954221
Q ss_pred --hhHH---HhhhccC-C---CCCCC------CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 826 --QQIF---DNILNRK-I---PWPRV------PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 826 --~ei~---qkIl~~~-~---~~P~l------p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
..+. +...... . .-|.+ +.....++.+++.+||+.||.+|| ++.|+++.
T Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP---t~~evl~~ 947 (968)
T PLN00113 884 VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP---CANDVLKT 947 (968)
T ss_pred CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc---CHHHHHHH
Confidence 0111 1000000 0 00111 111223577899999999999999 89888764
No 389
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-32 Score=312.35 Aligned_cols=253 Identities=25% Similarity=0.362 Sum_probs=209.9
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+...+.++||+|-||.|.+|+- ..+..||+|+++... ..+....|.+|+++|.+|+||||++|+++|..++.+||||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 4578899999999999999996 457999999998654 3445678999999999999999999999999999999999
Q ss_pred EeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCC
Q 001857 669 EYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDD 746 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~dd 746 (1003)
|||+.|+|.+++.++ ..+.......++.||+.|++||.+.+||||||.+.|+|++.++++||+|||+++....
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys----- 689 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS----- 689 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccccccc-----
Confidence 999999999999887 3334555667999999999999999999999999999999999999999999983111
Q ss_pred CCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh--CCCCCCCCC
Q 001857 747 LSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV--GIPPFNAEH 824 (1003)
Q Consensus 747 ls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT--Gk~PF~~~~ 824 (1003)
++. .+.....+-..+|||||.+....++.++|+|+||+++||+++ ...||....
T Consensus 690 --g~y----------------------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt 745 (807)
T KOG1094|consen 690 --GDY----------------------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT 745 (807)
T ss_pred --CCc----------------------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh
Confidence 000 011123455678999999999999999999999999999884 789998888
Q ss_pred hhhHHHhhhcc-----CCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 825 PQQIFDNILNR-----KIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 825 ~~ei~qkIl~~-----~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
.+++.++...- ....+..|.-++..+..+|.+||..+-.+|| +.+++-.
T Consensus 746 ~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RP---sFe~lh~ 799 (807)
T KOG1094|consen 746 DEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRP---SFEQLHL 799 (807)
T ss_pred HHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCC---CHHHHHH
Confidence 77776655331 1112335677999999999999999999999 7777754
No 390
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=5.7e-33 Score=289.70 Aligned_cols=253 Identities=31% Similarity=0.542 Sum_probs=205.3
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc--e
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRE--N 663 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~--~ 663 (1003)
..++|++++++|+|.|+.||.|.+..++..++||+++.- ..+.+.+|+.||..|. ||||++|++...+.. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 568899999999999999999999999999999998753 2367889999999997 999999999988754 5
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC-CcEEEeecCCccccccC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~~~~~ 742 (1003)
.-||+||+++.+...+. +.++...++.|+.||+.||.|||++||+|||+||.|++|+.. ..++|+|+|+|.+...
T Consensus 110 paLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp- 185 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP- 185 (338)
T ss_pred chhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCC-
Confidence 77999999987766555 458888999999999999999999999999999999999974 5799999999985210
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc-CCCCccceeechhHHHHHHHhCCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG-TGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g-~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
+...+..+.+..|--||.+.. +.|++.-|+|||||++..|+..+-||.
T Consensus 186 -------------------------------~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF 234 (338)
T KOG0668|consen 186 -------------------------------GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 234 (338)
T ss_pred -------------------------------CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence 112234567788999999976 568999999999999999999888873
Q ss_pred -CCChhhHHHhhhc-----------------------------cCCCCCCC-----CCCCCHHHHHHHHhhccCCcCCcC
Q 001857 822 -AEHPQQIFDNILN-----------------------------RKIPWPRV-----PEEMSPEAHDLIDRFLTEDPHQRL 866 (1003)
Q Consensus 822 -~~~~~ei~qkIl~-----------------------------~~~~~P~l-----p~~iS~elkDLIrrcL~kDP~kRP 866 (1003)
+.+..+.+-+|.+ ...+|..+ ..-.++++.|||.++|.+|..+|+
T Consensus 235 hG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRl 314 (338)
T KOG0668|consen 235 HGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERL 314 (338)
T ss_pred CCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcccccc
Confidence 4443333333322 01111111 112579999999999999999999
Q ss_pred CCCCHHHHHcCCCCCCC
Q 001857 867 GSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 867 g~~TAeELLqHPFFk~I 883 (1003)
||.|.+.||||..+
T Consensus 315 ---TakEam~HpyF~~~ 328 (338)
T KOG0668|consen 315 ---TAKEAMAHPYFAPV 328 (338)
T ss_pred ---chHHHhcCchHHHH
Confidence 99999999999754
No 391
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.98 E-value=1.4e-32 Score=329.57 Aligned_cols=270 Identities=50% Similarity=0.893 Sum_probs=226.4
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ly 665 (1003)
..-.+|..++.|-.|+||.||+++++.+.+.+|+|+ .+..+.-++ |+....+|++|
T Consensus 80 p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~lilRn----------ilt~a~npfvv------------- 135 (1205)
T KOG0606|consen 80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLILRN----------ILTFAGNPFVV------------- 135 (1205)
T ss_pred CCccccceeEeeccCCCCceeeeeccccccchhhcc-cccchhhhc----------cccccCCccee-------------
Confidence 345789999999999999999999999999999954 443321111 45555667666
Q ss_pred EEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 666 LVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|+-.+.++..+.++.+. +.+++|||+-||+|||+||+|.||+.-|++|++|||+++.+....+.
T Consensus 136 --------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 --------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred --------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 57777777777777654 78999999999999999999999999999999999999965322111
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP 825 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~ 825 (1003)
.++. ..+.. ..........||||.|+|||++..++|+..+|||++|+|+||++.|+.||.++.+
T Consensus 200 ----------nl~e---g~I~k---~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp 263 (1205)
T KOG0606|consen 200 ----------NLKE---GHIEK---DTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 263 (1205)
T ss_pred ----------hhhh---cchHH---HHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence 1110 01111 1112334567999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHHhhhcCCccCCCCCCCCC
Q 001857 826 QQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTLARQKAAFVPTSESALDT 905 (1003)
Q Consensus 826 ~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L~~~k~pfvP~~~s~lDt 905 (1003)
++++..++...+.||+-...++++++++|.++|..+|..|.+-+++-++++|+||+.+||..|.++++.|+|......|+
T Consensus 264 eelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~llRqkaefvpql~~eddt 343 (1205)
T KOG0606|consen 264 EELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSLLRQKAEFVPQLESEDDT 343 (1205)
T ss_pred HHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchhhhhhccccccccccccc
Confidence 99999999999999987788999999999999999999999988999999999999999999999999999999999999
Q ss_pred CCcccc
Q 001857 906 SYFTSR 911 (1003)
Q Consensus 906 s~F~s~ 911 (1003)
+||+++
T Consensus 344 syfdTR 349 (1205)
T KOG0606|consen 344 SYFDTR 349 (1205)
T ss_pred hhhccc
Confidence 999873
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-33 Score=296.60 Aligned_cols=261 Identities=29% Similarity=0.491 Sum_probs=212.3
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----eE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRE-----NL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~-----~l 664 (1003)
+.+.-+.||.|+||.||.+.+..+|+.||+|.+..-. ..-...+.+.+|..+|...+|.|++..++..+... .+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 3455578999999999999999999999999875321 22234478899999999999999999887776543 47
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ 744 (1003)
|.++|+|.. +|..+|-.-+.++.+.++.+++||+.||+|||+.||+||||||.|+|++.|..+||||||+|+....
T Consensus 133 YV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~--- 208 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ--- 208 (449)
T ss_pred HHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch---
Confidence 899999955 8998888888999999999999999999999999999999999999999999999999999995211
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
.........+-|-+|.|||+++|. .|+.++||||+|||+.|||..+..|...
T Consensus 209 ---------------------------d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq 261 (449)
T KOG0664|consen 209 ---------------------------RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA 261 (449)
T ss_pred ---------------------------hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence 111223345678899999999984 5899999999999999999999999988
Q ss_pred ChhhHHHhhhc-----------------------cCCCCCCC--------CCCCCHHHHHHHHhhccCCcCCcCCCCCHH
Q 001857 824 HPQQIFDNILN-----------------------RKIPWPRV--------PEEMSPEAHDLIDRFLTEDPHQRLGSGGAS 872 (1003)
Q Consensus 824 ~~~ei~qkIl~-----------------------~~~~~P~l--------p~~iS~elkDLIrrcL~kDP~kRPg~~TAe 872 (1003)
++.+.++.|.. +...-|.+ +..-..++.+++.++|..||.+|. +..
T Consensus 262 ~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkri---s~~ 338 (449)
T KOG0664|consen 262 GPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRI---SVE 338 (449)
T ss_pred ChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccc---cHh
Confidence 87776666543 11111211 123346789999999999999999 899
Q ss_pred HHHcCCCCCCCCh
Q 001857 873 EVKQHVFFKDINW 885 (1003)
Q Consensus 873 ELLqHPFFk~Idw 885 (1003)
+.+.|++..+.+.
T Consensus 339 ~A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 339 EALQHRYLEEGRL 351 (449)
T ss_pred hhcccccccccce
Confidence 9999999976543
No 393
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=7.2e-33 Score=319.51 Aligned_cols=258 Identities=32% Similarity=0.535 Sum_probs=227.2
Q ss_pred cCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
-++|+++..+|.|+||.||+|+++.+++..|+|+++... .....-+..|+-+++.++|||||.+++.|...+.+++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 478999999999999999999999999999999998643 23445667899999999999999999999999999999
Q ss_pred EEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||||.||+|.+..+--+++++.++.+..++.+.||+|||+.|=+|||||-.|||+++.|.+||+|||.+-..
T Consensus 91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqi-------- 162 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQI-------- 162 (829)
T ss_pred EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhh--------
Confidence 999999999999988899999999999999999999999999999999999999999999999999987520
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhh---ccCCCCccceeechhHHHHHHHhCCCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEIL---LGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL---~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
+ ...-+..++.|||+|||||+. +..+|+..||||++|++..|+-.-++|-....
T Consensus 163 ------------------t-----ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh 219 (829)
T KOG0576|consen 163 ------------------T-----ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH 219 (829)
T ss_pred ------------------h-----hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence 0 112345689999999999986 35779999999999999999999999977777
Q ss_pred hhhHHHhhhccCCCCCCC--CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 825 PQQIFDNILNRKIPWPRV--PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~l--p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
+......+-+..+..|.+ +..+++.+-+|++.+|.++|++|| +++.+|+|||...
T Consensus 220 pmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRp---taeklL~h~fvs~ 276 (829)
T KOG0576|consen 220 PMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRP---TAEKLLQHPFVSQ 276 (829)
T ss_pred hHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCC---Chhhheeceeecc
Confidence 777666666666655544 346899999999999999999999 9999999999864
No 394
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=5.5e-32 Score=316.00 Aligned_cols=256 Identities=25% Similarity=0.364 Sum_probs=219.6
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccce
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGD---LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk---~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~ 663 (1003)
......|-++||.|.||.|+.|+.+..|+ .||||.++... .+.+...|+.|+.||-+.+||||++|.++......
T Consensus 627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P 704 (996)
T KOG0196|consen 627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP 704 (996)
T ss_pred ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence 34557888999999999999999986664 79999998653 45667899999999999999999999999999999
Q ss_pred EEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccC
Q 001857 664 LYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~ 742 (1003)
++||+|||++|+|..+|+.+ +.|+..++..+++.|+.|++||-.+|+|||||...|||++.+-..|++||||+++.. +
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle-d 783 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE-D 783 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecc-c
Confidence 99999999999999999865 779999999999999999999999999999999999999999999999999999521 1
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~ 821 (1003)
..+ . ..+ +..---..+|.|||.|....++.++||||+|++|||.++ |..||.
T Consensus 784 d~~-----~--~yt--------------------t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYW 836 (996)
T KOG0196|consen 784 DPE-----A--AYT--------------------TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 836 (996)
T ss_pred CCC-----c--ccc--------------------ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccc
Confidence 110 0 000 001112457999999999999999999999999999885 999999
Q ss_pred CCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
..+.++++..|..+ +.+| -|.+++..+..|+..||++|-.+|| ...+|..+
T Consensus 837 dmSNQdVIkaIe~g-yRLP-pPmDCP~aL~qLMldCWqkdR~~RP---~F~qiV~~ 887 (996)
T KOG0196|consen 837 DMSNQDVIKAIEQG-YRLP-PPMDCPAALYQLMLDCWQKDRNRRP---KFAQIVST 887 (996)
T ss_pred ccchHHHHHHHHhc-cCCC-CCCCCcHHHHHHHHHHHHHHhhcCC---CHHHHHHH
Confidence 99999999998765 4455 3678999999999999999999999 78887765
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-32 Score=310.06 Aligned_cols=203 Identities=29% Similarity=0.520 Sum_probs=182.3
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHH-----HHHHHHHHHHHhcC---CCcEEEEEeee
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAV-----ESILAERDILISVR---NPFVVRFFYSF 658 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~i-----e~~lrEi~IL~~L~---HPNIVkL~~~f 658 (1003)
.+.+|..++.||.|+||.|++|.++.+...|+||.|.|.++.....+ -.+-.|+.||..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 45689999999999999999999999999999999999876544443 34567999999998 99999999999
Q ss_pred eccceEEEEEEec-cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcc
Q 001857 659 TCRENLYLVMEYL-NGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1003)
Q Consensus 659 ~d~~~lyLVmEy~-~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1003)
++++++||+||.- +|.+|+++|.....++|.+++.|++|++.|+++||+.||||||||-+|+.++.+|.+||+|||.|.
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa 718 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAA 718 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchh
Confidence 9999999999976 467999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC-CccceeechhHHHHHHHhC
Q 001857 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVG 816 (1003)
Q Consensus 738 ~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~kSDIWSLGVILYELLTG 816 (1003)
.. .......++||..|.|||++.|..| +..-|||+||++||.+...
T Consensus 719 ~~---------------------------------ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyk 765 (772)
T KOG1152|consen 719 YT---------------------------------KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYK 765 (772)
T ss_pred hh---------------------------------cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEec
Confidence 31 1122346899999999999999888 7889999999999999999
Q ss_pred CCCCCC
Q 001857 817 IPPFNA 822 (1003)
Q Consensus 817 k~PF~~ 822 (1003)
..||+.
T Consensus 766 enpyyn 771 (772)
T KOG1152|consen 766 ENPYYN 771 (772)
T ss_pred cCCCcC
Confidence 999864
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=6e-32 Score=318.33 Aligned_cols=246 Identities=30% Similarity=0.420 Sum_probs=198.1
Q ss_pred EEEeeccCce-EEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceEEEEEEec
Q 001857 594 IKPISRGAFG-RVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENLYLVMEYL 671 (1003)
Q Consensus 594 lk~LG~G~FG-tVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~lyLVmEy~ 671 (1003)
-+.+|.|+.| .||+|.. .|+.||||.+-. +......+|+..|+.. +|||||++|+.-++...+||..|+|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 3568999987 5789986 578999997643 3446778999999887 5999999999999999999999999
Q ss_pred cCCChHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC---C--CcEEEeecCCccccccC
Q 001857 672 NGGDLYSLLRNLGC----LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH---D--GHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 672 ~GGSL~d~L~~~g~----L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~---d--G~VKLiDFGLAk~~~~~ 742 (1003)
.. +|.+++...+. ......+..+.|++.||++||+.+||||||||.||||+. + ..++|+|||+|+.....
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 65 99999987411 112445788999999999999999999999999999976 3 46899999999842110
Q ss_pred CCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC-CCCCC
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG-IPPFN 821 (1003)
Q Consensus 743 ~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTG-k~PF~ 821 (1003)
.....+..+..||-+|+|||++.....+.++||+||||++|..++| ..||.
T Consensus 665 ----------------------------~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 665 ----------------------------KSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred ----------------------------cchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence 0111234567899999999999998889999999999999999985 99997
Q ss_pred CCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 822 AEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 822 ~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
..... -.+|+++...+-.+......++.|||.+||.++|..|| +|.++|.||||-
T Consensus 717 d~~~R--~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RP---sa~~VL~HPlFW 771 (903)
T KOG1027|consen 717 DSLER--QANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRP---SATDVLNHPLFW 771 (903)
T ss_pred chHHh--hhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCC---CHHHHhCCCccC
Confidence 65443 34677776655443322223999999999999999999 999999999995
No 397
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-30 Score=308.76 Aligned_cols=257 Identities=28% Similarity=0.452 Sum_probs=210.9
Q ss_pred CCCcccCCeEEEEEeeccCceEEEEEEECC-------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEE
Q 001857 583 KDRTSIDDFEIIKPISRGAFGRVFLAKKRT-------TGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRF 654 (1003)
Q Consensus 583 k~~~~lddYeIlk~LG~G~FGtVyLArdk~-------tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL 654 (1003)
.+....++..+.+.||+|.||.|++|.... ....||||.++.... ....+.+..|+.+|+.+ +||||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 455555667777899999999999997531 145799999876543 35678899999999987 59999999
Q ss_pred EeeeeccceEEEEEEeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCc
Q 001857 655 FYSFTCRENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPD 718 (1003)
Q Consensus 655 ~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g----------------~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPe 718 (1003)
++++.....+++|+||+..|+|..+++..+ .++......++.||+.|++||++..+|||||-.+
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999998765 3888899999999999999999999999999999
Q ss_pred ceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccC--CCCCCCchhhccCC
Q 001857 719 NLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVG--TPDYLAPEILLGTG 796 (1003)
Q Consensus 719 NILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vG--Tp~YmAPEVL~g~~ 796 (1003)
|||+..+..+||+|||+|+..... + ........| ...|||||.+....
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~--~----------------------------~y~~~~~~~~LP~kWmApEsl~~~~ 497 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNK--D----------------------------YYRTKSSAGTLPVKWMAPESLFDRV 497 (609)
T ss_pred hEEecCCCEEEEccccceeccCCC--C----------------------------ceEecCCCCccceeecCHHHhccCc
Confidence 999999999999999999831100 0 001111122 23599999999999
Q ss_pred CCccceeechhHHHHHHHh-CCCCCCCCC-hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 797 HGTTADWWSVGIILFELIV-GIPPFNAEH-PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 797 ys~kSDIWSLGVILYELLT-Gk~PF~~~~-~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
|+.++||||+|++||||++ |..||.+.. ..++++.+..+.. ...|..+++++.++++.||..+|++|| +..++
T Consensus 498 ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r--~~~P~~c~~eiY~iM~~CW~~~p~~RP---~F~~~ 572 (609)
T KOG0200|consen 498 FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNR--MEQPEHCSDEIYDLMKSCWNADPEDRP---TFSEC 572 (609)
T ss_pred ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhCCCcccCC---CHHHH
Confidence 9999999999999999998 999998865 6666665555443 346788999999999999999999999 55555
Q ss_pred Hc
Q 001857 875 KQ 876 (1003)
Q Consensus 875 Lq 876 (1003)
.+
T Consensus 573 ~~ 574 (609)
T KOG0200|consen 573 VE 574 (609)
T ss_pred HH
Confidence 43
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=2.1e-29 Score=246.42 Aligned_cols=212 Identities=43% Similarity=0.769 Sum_probs=186.3
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCCh
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 676 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL 676 (1003)
||.|++|.||++....+++.+++|++....... ....+.+|+.+++.+.|++|+++++++......+++||++.|++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987654221 346788999999999999999999999999999999999999999
Q ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-CCcEEEeecCCccccccCCCCCCCCCCccC
Q 001857 677 YSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLINSTDDLSGPAVSG 754 (1003)
Q Consensus 677 ~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ 754 (1003)
.+++... ..++...+..++.+++.+|+|||+.|++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK----------- 147 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc-----------
Confidence 9999876 57899999999999999999999999999999999999999 8999999999987411000
Q ss_pred cccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhh
Q 001857 755 TTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNIL 833 (1003)
Q Consensus 755 ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl 833 (1003)
.......++..|++||.+... .++.+.|+|+||+++|+|
T Consensus 148 --------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------- 187 (215)
T cd00180 148 --------------------SLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------- 187 (215)
T ss_pred --------------------chhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------
Confidence 012235678889999999887 789999999999999999
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCC
Q 001857 834 NRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHV 878 (1003)
Q Consensus 834 ~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHP 878 (1003)
..+.+++.+||+.||.+|| ++.++++|+
T Consensus 188 --------------~~~~~~l~~~l~~~p~~R~---~~~~l~~~~ 215 (215)
T cd00180 188 --------------PELKDLIRKMLQKDPEKRP---SAKEILEHL 215 (215)
T ss_pred --------------HHHHHHHHHHhhCCcccCc---CHHHHhhCC
Confidence 6789999999999999999 999999875
No 399
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=9.3e-31 Score=291.44 Aligned_cols=285 Identities=24% Similarity=0.420 Sum_probs=209.0
Q ss_pred cCCeEEEEEeeccCceEEEEEEECC---CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccce
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRT---TGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk~---tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~ 663 (1003)
.+.|.++.+||+|+|++||+|.+.. .+++||+|.+.... ...++.+|+++|..+ .+.||+++.+++...+.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 3569999999999999999999877 78899999886543 346789999999988 58899999999999999
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-CCcEEEeecCCccccccC
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~~~~~ 742 (1003)
+++||||++.-+..++... ++-..++.|++.++.||.++|++|||||||||.|+|++. .+.-.|+|||||.....+
T Consensus 110 v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~ 186 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY 186 (418)
T ss_pred eEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence 9999999999888888765 668899999999999999999999999999999999986 477899999999731111
Q ss_pred CCCCC------------CCCCccCcccCCCCCcc-chhhhhhhhhhccccccCCCCCCCchhhccC-CCCccceeechhH
Q 001857 743 STDDL------------SGPAVSGTTLLGDEEPQ-LTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHGTTADWWSVGI 808 (1003)
Q Consensus 743 ~~ddl------------s~p~~s~ttl~g~~~~~-lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys~kSDIWSLGV 808 (1003)
..... .+.....+...+...+. .................||++|.|||++... ..+.++||||.|+
T Consensus 187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GV 266 (418)
T KOG1167|consen 187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGV 266 (418)
T ss_pred hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccc
Confidence 10000 01111111111100010 0000011223445678999999999999874 4689999999999
Q ss_pred HHHHHHhCCCCCCCC-ChhhHHHhhhc--------------cC------CC----------CCCC---------------
Q 001857 809 ILFELIVGIPPFNAE-HPQQIFDNILN--------------RK------IP----------WPRV--------------- 842 (1003)
Q Consensus 809 ILYELLTGk~PF~~~-~~~ei~qkIl~--------------~~------~~----------~P~l--------------- 842 (1003)
|+.-++++..||... +.......|.. +. .. |..+
T Consensus 267 I~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~ 346 (418)
T KOG1167|consen 267 ILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTER 346 (418)
T ss_pred eeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceee
Confidence 999999999998432 11111111100 00 00 0000
Q ss_pred ---CCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 843 ---PEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 843 ---p~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
.+.++..+.||+.+||+.||.+|. +|++.|+||||...
T Consensus 347 ~~~~d~~~~~~~dlLdk~le~np~kRi---tAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 347 EIGSDVFPALLLDLLDKCLELNPQKRI---TAEDALKHPFFDEA 387 (418)
T ss_pred ccccccccHHHHHHHHHHccCChhhcc---cHHHHhcCcCCcch
Confidence 123456899999999999999999 99999999999854
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=3.5e-29 Score=252.17 Aligned_cols=214 Identities=45% Similarity=0.752 Sum_probs=183.7
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... ...+.+.+|+..+..++|+|++++++.+......|+++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 67889999999999999999888999999998865432 2457888999999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCC
Q 001857 671 LNGGDLYSLLRNLGC-LDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG 749 (1003)
Q Consensus 671 ~~GGSL~d~L~~~g~-L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~ 749 (1003)
+++++|.+++..... +++..+..++.+++.+|.|||++|++|+||+|.||+++.++.++|+|||++.......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~------ 152 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL------ 152 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc------
Confidence 999999999988766 8999999999999999999999999999999999999999999999999987411000
Q ss_pred CCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhh-ccCCCCccceeechhHHHHHHHhCCCCCCC--CChh
Q 001857 750 PAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEIL-LGTGHGTTADWWSVGIILFELIVGIPPFNA--EHPQ 826 (1003)
Q Consensus 750 p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL-~g~~ys~kSDIWSLGVILYELLTGk~PF~~--~~~~ 826 (1003)
........++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .+..
T Consensus 153 ------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~ 208 (225)
T smart00221 153 ------------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTS 208 (225)
T ss_pred ------------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHH
Confidence 0012345788899999999 667788899999999999999999999977 4444
Q ss_pred hHHHhhhccC
Q 001857 827 QIFDNILNRK 836 (1003)
Q Consensus 827 ei~qkIl~~~ 836 (1003)
.+.+.+..+.
T Consensus 209 ~~~~~~~~~~ 218 (225)
T smart00221 209 LLSDVWSFGV 218 (225)
T ss_pred HHHHHHhcCC
Confidence 6666666554
No 401
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9.4e-30 Score=286.09 Aligned_cols=243 Identities=24% Similarity=0.421 Sum_probs=190.5
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh--cCCCcEEEEEeeeeccc--
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS--VRNPFVVRFFYSFTCRE-- 662 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~--L~HPNIVkL~~~f~d~~-- 662 (1003)
.+...++++.||+|.||.||+|+. +++.||||++.. ...+.+.+|.+|... +.|+||++++++-....
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 356688889999999999999987 469999999864 345788999999875 58999999998766544
Q ss_pred --eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh---------cCceeccCCCcceeecCCCcEEEe
Q 001857 663 --NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS---------LRVVHRDLKPDNLLIAHDGHIKLT 731 (1003)
Q Consensus 663 --~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs---------~GIIHRDIKPeNILLd~dG~VKLi 731 (1003)
.++||+||.+.|+|.++|+. ..++.....+++.-+++||+|||+ ..|+|||||..|||+..+++..|+
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 78999999999999999987 468999999999999999999995 369999999999999999999999
Q ss_pred ecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC-C-----ccceeec
Q 001857 732 DFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-G-----TTADWWS 805 (1003)
Q Consensus 732 DFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s-----~kSDIWS 805 (1003)
|||||...... .........+||.+|||||++.|.-- . ...||||
T Consensus 359 DFGLAl~~~p~-----------------------------~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYa 409 (534)
T KOG3653|consen 359 DFGLALRLEPG-----------------------------KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYA 409 (534)
T ss_pred ccceeEEecCC-----------------------------CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHH
Confidence 99999852210 00111234799999999999987421 1 3689999
Q ss_pred hhHHHHHHHhCCC------------CCC-----CCChhhHHHhhhccCCCCCCCCCC-----CCHHHHHHHHhhccCCcC
Q 001857 806 VGIILFELIVGIP------------PFN-----AEHPQQIFDNILNRKIPWPRVPEE-----MSPEAHDLIDRFLTEDPH 863 (1003)
Q Consensus 806 LGVILYELLTGk~------------PF~-----~~~~~ei~qkIl~~~~~~P~lp~~-----iS~elkDLIrrcL~kDP~ 863 (1003)
+|.+||||++... ||. ..+.+++...++..+ ..|.++.. --.-+++.|..||..||+
T Consensus 410 mgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK-~RP~~p~~W~~h~~~~~l~et~EeCWDhDae 488 (534)
T KOG3653|consen 410 MGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKK-QRPKIPDAWRKHAGMAVLCETIEECWDHDAE 488 (534)
T ss_pred HHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhc-cCCCChhhhhcCccHHHHHHHHHHHcCCchh
Confidence 9999999997432 342 233445554444433 33555432 235689999999999999
Q ss_pred CcCCC
Q 001857 864 QRLGS 868 (1003)
Q Consensus 864 kRPg~ 868 (1003)
.|+++
T Consensus 489 ARLTA 493 (534)
T KOG3653|consen 489 ARLTA 493 (534)
T ss_pred hhhhh
Confidence 99954
No 402
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=296.42 Aligned_cols=247 Identities=23% Similarity=0.329 Sum_probs=206.5
Q ss_pred eEEEEEeeccCceEEEEEEECCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGD----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk----~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyL 666 (1003)
.+..++||.|+||+||+|.+...|+ +||+|++..... .+....++.|+-+|.+++|||+++|++++.... +.|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS--PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC--chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 5667899999999999999976554 689998865432 334468899999999999999999999998776 889
Q ss_pred EEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCC
Q 001857 667 VMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~d 745 (1003)
|++|+++|+|.++++.+ +.+.......|..||+.||.|||.+++|||||-.+|||+..-.++||+|||+|+....+..+
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 99999999999999865 57999999999999999999999999999999999999999999999999999852111110
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHh-CCCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIV-GIPPFNAEH 824 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLT-Gk~PF~~~~ 824 (1003)
.......-.+.|||=|.+....|+.++||||+||++||++| |..||.+..
T Consensus 855 -----------------------------y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~ 905 (1177)
T KOG1025|consen 855 -----------------------------YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP 905 (1177)
T ss_pred -----------------------------ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence 01111223457999999999999999999999999999998 999999998
Q ss_pred hhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHH
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEV 874 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeEL 874 (1003)
..++-..+..+.. + ..|+.++.++.-++.+||-.|+..|| +++++
T Consensus 906 ~~eI~dlle~geR-L-sqPpiCtiDVy~~mvkCwmid~~~rp---~fkel 950 (1177)
T KOG1025|consen 906 AEEIPDLLEKGER-L-SQPPICTIDVYMVMVKCWMIDADSRP---TFKEL 950 (1177)
T ss_pred HHHhhHHHhcccc-C-CCCCCccHHHHHHHHHHhccCcccCc---cHHHH
Confidence 8887766655443 3 35778999999999999999999999 55444
No 403
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-29 Score=279.96 Aligned_cols=251 Identities=25% Similarity=0.415 Sum_probs=194.2
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh--cCCCcEEEEEeeeeccc-
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS--VRNPFVVRFFYSFTCRE- 662 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~--L~HPNIVkL~~~f~d~~- 662 (1003)
..-.+.++++.||+|.||.||+|+++ |..||||++...+ .....+|.+|.+. |+|+||+.++++-..++
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g 279 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNG 279 (513)
T ss_pred hhhheeEEEEEecCccccceeecccc--CCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence 34456999999999999999999985 7889999987542 3567788888876 59999999997765443
Q ss_pred ---eEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-----c---CceeccCCCcceeecCCCcEEEe
Q 001857 663 ---NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-----L---RVVHRDLKPDNLLIAHDGHIKLT 731 (1003)
Q Consensus 663 ---~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-----~---GIIHRDIKPeNILLd~dG~VKLi 731 (1003)
.+|||++|.+.|+|+++|.+ ..++.+....++.-++.||++||. + .|.|||||..|||+..+|..-|+
T Consensus 280 s~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 280 SWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred ceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 69999999999999999988 678999999999999999999994 2 49999999999999999999999
Q ss_pred ecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC-----C-ccceeec
Q 001857 732 DFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-----G-TTADWWS 805 (1003)
Q Consensus 732 DFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-----s-~kSDIWS 805 (1003)
|||||....... +. -.-..+..+||-+|||||++...-. + ..+||||
T Consensus 359 DLGLAv~h~~~t-~~--------------------------idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYa 411 (513)
T KOG2052|consen 359 DLGLAVRHDSDT-DT--------------------------IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYA 411 (513)
T ss_pred eceeeEEecccC-Cc--------------------------ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHH
Confidence 999997422110 10 0123456899999999999975321 1 3589999
Q ss_pred hhHHHHHHHhC----------CCCCCC-----CChhhHHHhhhccCCCCCCCCCCCC-----HHHHHHHHhhccCCcCCc
Q 001857 806 VGIILFELIVG----------IPPFNA-----EHPQQIFDNILNRKIPWPRVPEEMS-----PEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 806 LGVILYELLTG----------k~PF~~-----~~~~ei~qkIl~~~~~~P~lp~~iS-----~elkDLIrrcL~kDP~kR 865 (1003)
||.++||++.. ++||.+ ++.+++.+-+.-.+. .|.+|..++ ..+..+++.||..||..|
T Consensus 412 fgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~-RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aR 490 (513)
T KOG2052|consen 412 FGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKL-RPNIPNRWKSDPALRVMAKLMKECWYANPAAR 490 (513)
T ss_pred HHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeeccc-CCCCCcccccCHHHHHHHHHHHHhhcCCchhh
Confidence 99999999852 578864 344444444433333 244444332 246678999999999999
Q ss_pred CCCCCHHHHHc
Q 001857 866 LGSGGASEVKQ 876 (1003)
Q Consensus 866 Pg~~TAeELLq 876 (1003)
+ ||-.|++
T Consensus 491 l---tALriKK 498 (513)
T KOG2052|consen 491 L---TALRIKK 498 (513)
T ss_pred h---HHHHHHH
Confidence 9 7765554
No 404
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-29 Score=259.31 Aligned_cols=216 Identities=31% Similarity=0.552 Sum_probs=178.2
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeeccceEE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~-L~HPNIVkL~~~f~d~~~ly 665 (1003)
.-++...+..||+|+||.|-+.++..+|...|+|.+...- .....++.++|+++..+ ...|++|.+|+.+.....++
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 3456777889999999999999999999999999987543 23445778889988655 57999999999999999999
Q ss_pred EEEEeccCCChHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHhhc-CceeccCCCcceeecCCCcEEEeecCCccccc
Q 001857 666 LVMEYLNGGDLYSLL----RNLGCLDEDVARVYIAEVVLALEYLHSL-RVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGL 740 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L----~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~-GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~ 740 (1003)
|.||.|.. +|..+. .+.+.++|..+-.++..++.||.|||++ .|||||+||+||||+.+|++|+||||++-. .
T Consensus 122 IcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~-L 199 (282)
T KOG0984|consen 122 ICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGY-L 199 (282)
T ss_pred EeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccccee-e
Confidence 99999964 775443 4557899999999999999999999975 899999999999999999999999999863 1
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc----CCCCccceeechhHHHHHHHhC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG----TGHGTTADWWSVGIILFELIVG 816 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g----~~ys~kSDIWSLGVILYELLTG 816 (1003)
.++ -......|--.|||||.+.. .+|+-++||||||+++.||.++
T Consensus 200 ~dS-------------------------------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~l 248 (282)
T KOG0984|consen 200 VDS-------------------------------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAIL 248 (282)
T ss_pred hhh-------------------------------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhc
Confidence 110 01122457778999999863 4799999999999999999999
Q ss_pred CCCCC-CCChhhHHHhhhccCC
Q 001857 817 IPPFN-AEHPQQIFDNILNRKI 837 (1003)
Q Consensus 817 k~PF~-~~~~~ei~qkIl~~~~ 837 (1003)
+.||. ..++.+.+.+++....
T Consensus 249 r~PY~~w~tpF~qLkqvVeep~ 270 (282)
T KOG0984|consen 249 RFPYESWGTPFQQLKQVVEEPS 270 (282)
T ss_pred cccccccCCHHHHHHHHhcCCC
Confidence 99996 4677777888877643
No 405
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.95 E-value=1.9e-26 Score=233.83 Aligned_cols=260 Identities=40% Similarity=0.697 Sum_probs=209.6
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC-cEEEEEeeeeccceEEEEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP-FVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HP-NIVkL~~~f~d~~~lyLVmE 669 (1003)
|.+.+.||.|+||.||++.+. ..+|+|.+.+...........+.+|..++..+.|+ +|++++..+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999987 78999999876554444578899999999999988 79999999988888999999
Q ss_pred eccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC-cEEEeecCCccccccCCCC
Q 001857 670 YLNGGDLYSLLRNLG---CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINSTD 745 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g---~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~~~~d 745 (1003)
++.+++|.+++.... .+++..+..++.|++.+|.|+|+.|++||||||+|||++..+ .++++|||+++........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999998887765 799999999999999999999999999999999999999988 7999999998731100000
Q ss_pred CCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhcc---CCCCccceeechhHHHHHHHhCCCCCCC
Q 001857 746 DLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLG---TGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 746 dls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g---~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.. ........+||+.|+|||.+.+ ..+....|+||+|++++++++|..||..
T Consensus 159 -------------------~~------~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~ 213 (384)
T COG0515 159 -------------------SS------IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEG 213 (384)
T ss_pred -------------------cc------ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 00 0012356789999999999988 5788999999999999999999999877
Q ss_pred CCh----hhHHHhhhccCCC-CC-CCCCCC----CHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 823 EHP----QQIFDNILNRKIP-WP-RVPEEM----SPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 823 ~~~----~ei~qkIl~~~~~-~P-~lp~~i----S~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
... ......+.....+ .. ...... ...+.+++.+++..+|..|. +..+...++|..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~---~~~~~~~~~~~~ 279 (384)
T COG0515 214 EKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRL---SSSSDLSHDLLA 279 (384)
T ss_pred CCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcC---CHHHHhhchHhh
Confidence 663 4555555444432 11 111111 25799999999999999999 777777775554
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=1.9e-28 Score=299.69 Aligned_cols=223 Identities=17% Similarity=0.192 Sum_probs=153.2
Q ss_pred CcEEEEEeee-------eccceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcce
Q 001857 649 PFVVRFFYSF-------TCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNL 720 (1003)
Q Consensus 649 PNIVkL~~~f-------~d~~~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNI 720 (1003)
+||++++++| .....++++|||+ +++|.+++... +.+++..++.|+.||+.||+|||++|||||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 4677777766 2234678889987 56999999753 5699999999999999999999999999999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCC--Cc--cchhhhhh---hhhhccccccCCCCCCCchhhc
Q 001857 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDE--EP--QLTASEHQ---QERRKKRSAVGTPDYLAPEILL 793 (1003)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~--~~--~lt~~~~~---~~~~~~~s~vGTp~YmAPEVL~ 793 (1003)
||+..|.+|++|||++.......... .......+.... .. ........ .........+||+.|||||++.
T Consensus 112 Ll~~~~~~k~~d~~~~~~~~~~~~~~---~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 188 (793)
T PLN00181 112 VMSSFNHVSFIESASCSDSGSDEDAT---TKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN 188 (793)
T ss_pred EEcccCcEEEeeccccCcccccccCc---ccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc
Confidence 99888888888888776321110000 000000000000 00 00000000 0001122357999999999999
Q ss_pred cCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHH
Q 001857 794 GTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASE 873 (1003)
Q Consensus 794 g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeE 873 (1003)
+..|+.++|||||||+||||++|.+||.... ..+..+..... |.......+...+++.+||+++|.+|| ++.|
T Consensus 189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~~~P~~Rp---s~~e 261 (793)
T PLN00181 189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQILLNWPKEASFCLWLLHPEPSCRP---SMSE 261 (793)
T ss_pred cCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--ChhhhhcCHHHHHHHHHhCCCChhhCc---ChHH
Confidence 9999999999999999999999999876432 12222222211 111112345678999999999999999 9999
Q ss_pred HHcCCCCCC
Q 001857 874 VKQHVFFKD 882 (1003)
Q Consensus 874 LLqHPFFk~ 882 (1003)
+++||||..
T Consensus 262 il~h~~~~~ 270 (793)
T PLN00181 262 LLQSEFINE 270 (793)
T ss_pred Hhhchhhhh
Confidence 999999975
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-27 Score=254.86 Aligned_cols=239 Identities=27% Similarity=0.444 Sum_probs=186.4
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEE-eeeeccceEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFF-YSFTCRENLYL 666 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~-~~f~d~~~lyL 666 (1003)
+.|.+.+.||+|-||.+.+|+++.++..+++|.+.+... ....|.+|...--.| .|.||+.-| ..|++.+.+++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 569999999999999999999999999999999987643 346677777664444 588999877 45788889999
Q ss_pred EEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC--CCcEEEeecCCccccccCCC
Q 001857 667 VMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH--DGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~--dG~VKLiDFGLAk~~~~~~~ 744 (1003)
+|||++-|+|..-+.. ..+.|...+.++.|++.||.|||++++||||||.+||||-. ...|||||||+.+..
T Consensus 100 ~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~----- 173 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV----- 173 (378)
T ss_pred eeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc-----
Confidence 9999999999988876 45889999999999999999999999999999999999953 357999999998730
Q ss_pred CCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC---C--CCccceeechhHHHHHHHhCCCC
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT---G--HGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 745 ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~---~--ys~kSDIWSLGVILYELLTGk~P 819 (1003)
|++. ...--+-.|.+||+.... . ..+.+|+|.||+++|.+|||++|
T Consensus 174 ---------g~tV--------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~P 224 (378)
T KOG1345|consen 174 ---------GTTV--------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFP 224 (378)
T ss_pred ---------Ccee--------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCc
Confidence 0000 001124469999987532 2 36789999999999999999999
Q ss_pred CCCCC----hhhHHHhhhccC-CCCCCCCCCCCHHHHHHHHhhccCCcCCcC
Q 001857 820 FNAEH----PQQIFDNILNRK-IPWPRVPEEMSPEAHDLIDRFLTEDPHQRL 866 (1003)
Q Consensus 820 F~~~~----~~ei~qkIl~~~-~~~P~lp~~iS~elkDLIrrcL~kDP~kRP 866 (1003)
|.... +---+.+-..++ ...|.....+|+.+..+.++.|+.++++|-
T Consensus 225 WQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drc 276 (378)
T KOG1345|consen 225 WQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRC 276 (378)
T ss_pred chhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccc
Confidence 97422 111222222222 233444456899999999999999999994
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=5.8e-27 Score=232.23 Aligned_cols=161 Identities=26% Similarity=0.319 Sum_probs=130.0
Q ss_pred CChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCc
Q 001857 674 GDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAV 752 (1003)
Q Consensus 674 GSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~ 752 (1003)
|+|.+++... +.+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||+++...
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~------------ 60 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKT------------ 60 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeec------------
Confidence 6899999874 56999999999999999999999998 999999999999999 99987410
Q ss_pred cCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCCCCCh-hhHHHh
Q 001857 753 SGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHP-QQIFDN 831 (1003)
Q Consensus 753 s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~-~ei~qk 831 (1003)
.....||+.|||||++.+..|+.++|||||||++|||++|+.||..... ...+..
T Consensus 61 ------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~ 116 (176)
T smart00750 61 ------------------------PEQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEI 116 (176)
T ss_pred ------------------------cccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHH
Confidence 0112689999999999999999999999999999999999999976543 233334
Q ss_pred hhccCCCC-C---CCCCCCCH--HHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 832 ILNRKIPW-P---RVPEEMSP--EAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 832 Il~~~~~~-P---~lp~~iS~--elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
+....... + ..+..++. ++.+||.+||..+|.+|| ++.++++|+|+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp---~~~~ll~~~~~~ 169 (176)
T smart00750 117 LLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRRE---AANHYLAHCRAL 169 (176)
T ss_pred HHHHhccCCccccccHHHHHhhhhHHHHHHHHHhccccccc---CHHHHHHHHHHH
Confidence 33322211 0 01123344 699999999999999999 999999999874
No 409
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.92 E-value=3.8e-25 Score=244.31 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=205.1
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCC-----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-c
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGD-----LFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR-E 662 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk-----~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~-~ 662 (1003)
.+++....+-+|.||.||.|.++.... .|-+|.++.. ...-++..++.|.-++..+.|||+..+.++.... .
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence 457888889999999999998764332 3455655432 3455678889999999999999999999887654 4
Q ss_pred eEEEEEEeccCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecC
Q 001857 663 NLYLVMEYLNGGDLYSLLRNL--------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~d~L~~~--------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1003)
..+.++.++.-|+|..++..- +.++..+...++.|++.|++|||++||||.||..+|.+|++.-++||+|=.
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccch
Confidence 677888999899999999721 347778888899999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH
Q 001857 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI 814 (1003)
Q Consensus 735 LAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELL 814 (1003)
+++-.+....+ -+|++ .--...||+||.+.+..|+.++|+|||||+||||+
T Consensus 442 LSRDLFP~DYh-----------cLGDn------------------EnRPvkWMslEal~n~~yssasDvWsfGVllWELm 492 (563)
T KOG1024|consen 442 LSRDLFPGDYH-----------CLGDN------------------ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELM 492 (563)
T ss_pred hccccCccccc-----------ccCCC------------------CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHH
Confidence 99843221111 11221 12345799999999999999999999999999999
Q ss_pred h-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHc
Q 001857 815 V-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQ 876 (1003)
Q Consensus 815 T-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLq 876 (1003)
| |+.||...++.++...+..+.. ...|.++++++-.++..||+.+|++|| +.+++..
T Consensus 493 tlg~~PyaeIDPfEm~~ylkdGyR--laQP~NCPDeLf~vMacCWallpeeRP---sf~Qlv~ 550 (563)
T KOG1024|consen 493 TLGKLPYAEIDPFEMEHYLKDGYR--LAQPFNCPDELFTVMACCWALLPEERP---SFSQLVI 550 (563)
T ss_pred hcCCCCccccCHHHHHHHHhccce--ecCCCCCcHHHHHHHHHHHhcCcccCC---CHHHHHH
Confidence 8 9999999999999888876653 345789999999999999999999999 6666643
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=2.2e-24 Score=243.39 Aligned_cols=178 Identities=22% Similarity=0.158 Sum_probs=133.4
Q ss_pred CCcccCCeEEEEEeeccCceEEEEEEECC-CCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCcEEE-EEeeee
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRT-TGDLFAIKVLKKADM--IRKNAVESILAERDILISVRNPFVVR-FFYSFT 659 (1003)
Q Consensus 584 ~~~~lddYeIlk~LG~G~FGtVyLArdk~-tgk~VALKVIkks~i--~~~~~ie~~lrEi~IL~~L~HPNIVk-L~~~f~ 659 (1003)
.....++|++.+.||+|+||+||+|+++. ++..||||++..... ......+.+.+|+.+|..++|+||+. ++..
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 34445779999999999999999999876 678889998753211 12334567899999999999999985 4432
Q ss_pred ccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccC-CCcceeecCCCcEEEeecCCccc
Q 001857 660 CRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDL-KPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 660 d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDI-KPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
+..|||||||+|++|... .. .. ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+.
T Consensus 91 --~~~~LVmE~~~G~~L~~~-~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHLA-RP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred --CCcEEEEEccCCCCHHHh-Cc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 457999999999999732 11 11 1467899999999999999999999 99999999999999999999985
Q ss_pred cccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC
Q 001857 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT 795 (1003)
Q Consensus 739 ~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~ 795 (1003)
...... .........-.+.+|++.|+|||.+...
T Consensus 162 ~~~~~~-----------------------~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 162 FRRRGA-----------------------LYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cccCcc-----------------------hhhhhhhhhhhhhhccCccCCcccCChh
Confidence 211000 0000001112367899999999998643
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-23 Score=232.34 Aligned_cols=252 Identities=23% Similarity=0.309 Sum_probs=191.2
Q ss_pred CeEEEEEeeccCceEEEEEEECCCC-CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC----CcEEEEEeee-eccce
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTG-DLFAIKVLKKADMIRKNAVESILAERDILISVRN----PFVVRFFYSF-TCREN 663 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tg-k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H----PNIVkL~~~f-~d~~~ 663 (1003)
.|.+.++||+|+||.||+|.+..++ ..+|+|+......... ..+..|..++..+.. +++..+++.+ .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999997764 6899998765432111 146678888888762 6899999999 57778
Q ss_pred EEEEEEeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC-----CcEEEeecCCc
Q 001857 664 LYLVMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-----GHIKLTDFGLS 736 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-----G~VKLiDFGLA 736 (1003)
-||||+.+ |.+|.++.... +.++...+..++.|++.+|++||+.|+|||||||.|+++... ..+.|.|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999988 78999988655 579999999999999999999999999999999999999865 36999999999
Q ss_pred ccc--ccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH
Q 001857 737 KVG--LINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI 814 (1003)
Q Consensus 737 k~~--~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELL 814 (1003)
+.. ....... ..........+.||..|+++.+..+...+.+.|+||++.++.+|+
T Consensus 175 r~~~~~~~~~~~-----------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~ 231 (322)
T KOG1164|consen 175 RRFKYVGDSGGN-----------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELL 231 (322)
T ss_pred ccccccCCCCcc-----------------------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHh
Confidence 831 1100000 000011123567999999999999999999999999999999999
Q ss_pred hCCCCCCCCChhhHHHhhhccCCCC--CCCCCCCCHHHHHHHHhhccCCcCCcCCC
Q 001857 815 VGIPPFNAEHPQQIFDNILNRKIPW--PRVPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1003)
Q Consensus 815 TGk~PF~~~~~~ei~qkIl~~~~~~--P~lp~~iS~elkDLIrrcL~kDP~kRPg~ 868 (1003)
.|..||.+.........+....... .......+.++..+...+-..+...+|.+
T Consensus 232 ~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy 287 (322)
T KOG1164|consen 232 KGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDY 287 (322)
T ss_pred cCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCH
Confidence 9999997655322222222211111 11223456788888888888888999944
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=1.5e-25 Score=266.78 Aligned_cols=262 Identities=27% Similarity=0.396 Sum_probs=203.6
Q ss_pred EEEEEeeccCceEEEEEEECCCCCEEEEEEeec---cccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 592 EIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKK---ADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 592 eIlk~LG~G~FGtVyLArdk~tgk~VALKVIkk---s~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
.....+|.|++|.|+.+......+.++.|.... ...........+..|.-+-..+.|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456789999999999998887777777775542 22222333333666777778899999988777776666666669
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
|||++ +|+.++...+.+....+.-++.||+.||+|||..||.||||||+|+|+..+|.+||+|||.+.++.....
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e---- 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE---- 475 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc----
Confidence 99999 9999999988999999999999999999999999999999999999999999999999999875321110
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCc-cceeechhHHHHHHHhCCCCCCCCChhh
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGT-TADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~-kSDIWSLGVILYELLTGk~PF~~~~~~e 827 (1003)
.........+|+..|+|||++.+..|++ .+||||.|++++.|.+|+.||......+
T Consensus 476 -----------------------~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~ 532 (601)
T KOG0590|consen 476 -----------------------KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSD 532 (601)
T ss_pred -----------------------hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccc
Confidence 0012344689999999999999999964 6899999999999999999997544332
Q ss_pred HH--HhhhccCCC----CCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCCC
Q 001857 828 IF--DNILNRKIP----WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDIN 884 (1003)
Q Consensus 828 i~--qkIl~~~~~----~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~Id 884 (1003)
.. ...-..... ...+...++...+.+|.+||+.||.+|. ++++|++.+||+.+.
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~---ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 533 NSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRI---TIEQILNDEWIRSIE 592 (601)
T ss_pred cchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhhee---cHHHHhhChHhhhcc
Confidence 21 111111110 0112345788899999999999999999 999999999999774
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3.8e-23 Score=217.94 Aligned_cols=276 Identities=22% Similarity=0.301 Sum_probs=214.0
Q ss_pred cccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-CcEEEEEeeeeccceE
Q 001857 586 TSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN-PFVVRFFYSFTCRENL 664 (1003)
Q Consensus 586 ~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H-PNIVkL~~~f~d~~~l 664 (1003)
+....|+++++||.|+||.+|+|....+|..||||+-.... ....+..|..+...|++ ..|+.+..++.+..+-
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~yn 86 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYN 86 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhccccccc
Confidence 34578999999999999999999999999999999865432 12356678888888865 6788888888889999
Q ss_pred EEEEEeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC---CcEEEeecCCccccc
Q 001857 665 YLVMEYLNGGDLYSLLRN-LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD---GHIKLTDFGLSKVGL 740 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~-~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d---G~VKLiDFGLAk~~~ 740 (1003)
.|||+++ |.+|.+++.- ...++...+..++-|++.-++|+|.+++|||||||+|+|+.-+ ..+.|+|||+|+...
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred eeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 9999998 7788888753 3568999999999999999999999999999999999999754 468999999998521
Q ss_pred cCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCC
Q 001857 741 INSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 741 ~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
...+ ......+..+...||.+|.+-....+...+...|+-|+|.+|..+..|..||
T Consensus 166 d~~t------------------------~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPW 221 (341)
T KOG1163|consen 166 DIRT------------------------RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPW 221 (341)
T ss_pred cccc------------------------cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcc
Confidence 1100 0011123445678999999988888888899999999999999999999999
Q ss_pred CCC---ChhhHHHhhhccCCCCC--CCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC-------CCCChhHH
Q 001857 821 NAE---HPQQIFDNILNRKIPWP--RVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF-------KDINWDTL 888 (1003)
Q Consensus 821 ~~~---~~~ei~qkIl~~~~~~P--~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF-------k~Idwd~L 888 (1003)
.+. +..+-+++|...+...| .+..++|.++.-.|.-|-..--++-|++.-..++..--|+ --.||+.+
T Consensus 222 Qglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~l 301 (341)
T KOG1163|consen 222 QGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTML 301 (341)
T ss_pred cccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHH
Confidence 864 45566777877665544 3456789999999998888877777854323343332222 13588887
Q ss_pred hhh
Q 001857 889 ARQ 891 (1003)
Q Consensus 889 ~~~ 891 (1003)
..+
T Consensus 302 kqk 304 (341)
T KOG1163|consen 302 KQK 304 (341)
T ss_pred HHH
Confidence 654
No 414
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.6e-22 Score=218.95 Aligned_cols=250 Identities=21% Similarity=0.314 Sum_probs=199.2
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEEE
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyLV 667 (1003)
-.|++.++||+|+||..++|.+.-++++||||.-.... ..-.+..|....+.|. .++|...|++.++..+-.||
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 35999999999999999999999999999999754322 2345667777777774 68999999999999898999
Q ss_pred EEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC-----CcEEEeecCCcccccc
Q 001857 668 MEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-----GHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 668 mEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-----G~VKLiDFGLAk~~~~ 741 (1003)
||++ |-+|.++..-- ..|+...+..++.|++.-++|+|++.+|+|||||+|+||..- ..|.|+|||+|+...-
T Consensus 103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 9998 77998888654 469999999999999999999999999999999999999753 3589999999995211
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFN 821 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~ 821 (1003)
..+ ......+...+..||.+||+-...+|...+...|+-|||-++..+|.|..||.
T Consensus 182 p~T------------------------kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQ 237 (449)
T KOG1165|consen 182 PKT------------------------KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 237 (449)
T ss_pred ccc------------------------cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccc
Confidence 111 11122345667899999999999999999999999999999999999999997
Q ss_pred C---CChhhHHHhhhccCCCCC--CCCCCCCHHHHHHHHhhccCCcCCcCCC
Q 001857 822 A---EHPQQIFDNILNRKIPWP--RVPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1003)
Q Consensus 822 ~---~~~~ei~qkIl~~~~~~P--~lp~~iS~elkDLIrrcL~kDP~kRPg~ 868 (1003)
+ .+..+-+++|=..+...| .+..+++.++..-++-.-..+-.+-|++
T Consensus 238 GLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY 289 (449)
T KOG1165|consen 238 GLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDY 289 (449)
T ss_pred cccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence 5 456667777755443322 3445677777777766555555666644
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.87 E-value=3.7e-22 Score=205.92 Aligned_cols=141 Identities=25% Similarity=0.216 Sum_probs=111.2
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHH-----------------------HHHHHHHHHHHHHhcCCCc
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKN-----------------------AVESILAERDILISVRNPF 650 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~-----------------------~ie~~lrEi~IL~~L~HPN 650 (1003)
...||+|+||.||+|.+. +|+.||||+++........ ......+|..++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 457999999999999986 8999999999765321111 0123345999999998776
Q ss_pred EEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hhcCceeccCCCcceeecCCCcEE
Q 001857 651 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYL-HSLRVVHRDLKPDNLLIAHDGHIK 729 (1003)
Q Consensus 651 IVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYL-Hs~GIIHRDIKPeNILLd~dG~VK 729 (1003)
+...+... .. ..||||||++|++|...+...+.++...+..++.||+.+|.|| |+.||+||||||+|||++ ++.++
T Consensus 81 v~~p~~~~-~~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 81 IPCPEPIL-LK-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCcEEE-ec-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 64332222 12 2389999999988876655557899999999999999999999 799999999999999998 58899
Q ss_pred EeecCCccc
Q 001857 730 LTDFGLSKV 738 (1003)
Q Consensus 730 LiDFGLAk~ 738 (1003)
|+|||+|..
T Consensus 158 LiDFG~a~~ 166 (190)
T cd05147 158 IIDVSQSVE 166 (190)
T ss_pred EEEcccccc
Confidence 999999973
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=4e-21 Score=196.91 Aligned_cols=141 Identities=23% Similarity=0.148 Sum_probs=112.5
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-----------------------HHHHHHHHHHHHHHhcCCCc
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-----------------------NAVESILAERDILISVRNPF 650 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~-----------------------~~ie~~lrEi~IL~~L~HPN 650 (1003)
.+.||+|+||.||+|++. +|+.||||++........ .....+.+|...+..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999987 899999999986522100 01223467899999999998
Q ss_pred EEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcEE
Q 001857 651 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIK 729 (1003)
Q Consensus 651 IVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VK 729 (1003)
|......... ..||||||++|+++.........++...+..++.|++.+|.+||+ +||+||||||+|||++ ++.++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~ 157 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPY 157 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEE
Confidence 7544333322 248999999998665543344678889999999999999999999 9999999999999998 89999
Q ss_pred EeecCCccc
Q 001857 730 LTDFGLSKV 738 (1003)
Q Consensus 730 LiDFGLAk~ 738 (1003)
|+|||+|+.
T Consensus 158 liDFG~a~~ 166 (190)
T cd05145 158 IIDVSQAVE 166 (190)
T ss_pred EEEccccee
Confidence 999999974
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=4.7e-21 Score=204.36 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=115.1
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHH------HHHHHHHHHhcCCCcEEEEEeeeecc-
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVES------ILAERDILISVRNPFVVRFFYSFTCR- 661 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~------~lrEi~IL~~L~HPNIVkL~~~f~d~- 661 (1003)
++|++++.||.|+||.||++.. ++..+|+|++............. +.+|+..+.++.||+|..+..++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 5799999999999999999765 46689999997655444444444 57899999999999999998886643
Q ss_pred -------ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecC
Q 001857 662 -------ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1003)
Q Consensus 662 -------~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1003)
...+|+|||++|.+|.++.. +++ ..+.+|+.+|..||..||+||||||+||+++.+| ++|+|||
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg 179 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLS 179 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECC
Confidence 35899999999999988732 333 2456999999999999999999999999999988 9999999
Q ss_pred Ccc
Q 001857 735 LSK 737 (1003)
Q Consensus 735 LAk 737 (1003)
..+
T Consensus 180 ~~~ 182 (232)
T PRK10359 180 GKR 182 (232)
T ss_pred Ccc
Confidence 876
No 418
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=3.6e-22 Score=240.72 Aligned_cols=244 Identities=27% Similarity=0.371 Sum_probs=185.5
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc-cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD-MIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~-i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+|...+.||.+.|=+|.+|++.+ |. |++|++-+.. ...-....+.+.|+. ...++|||++.+.-+-......|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 68889999999999999999853 44 8999987654 223333334444555 56679999999988888888899999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls 748 (1003)
+|+.. +|++.+...+.+..-+.+.|+.||+.||..+|+.||+|+|||.+||||+.-+.+.|+||..-|...
T Consensus 101 qyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY-------- 171 (1431)
T KOG1240|consen 101 QYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTY-------- 171 (1431)
T ss_pred HHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCcc--------
Confidence 99976 999999998889999999999999999999999999999999999999999999999998765311
Q ss_pred CCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC-----------CCccceeechhHHHHHHHh-C
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG-----------HGTTADWWSVGIILFELIV-G 816 (1003)
Q Consensus 749 ~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~-----------ys~kSDIWSLGVILYELLT-G 816 (1003)
+..++-..++-+. .+..--..|+|||.+.... .+++.||||+||++.||++ |
T Consensus 172 --------LPeDNPadf~fFF--------DTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg 235 (1431)
T KOG1240|consen 172 --------LPEDNPADFTFFF--------DTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEG 235 (1431)
T ss_pred --------CCCCCcccceEEE--------ecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcC
Confidence 1111111111111 0111223699999986422 4678899999999999997 8
Q ss_pred CCCCCC-----------CChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 817 IPPFNA-----------EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 817 k~PF~~-----------~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.+||.- .+++.++++| -+..++.||..|++.||.+|+ +|++.|+.
T Consensus 236 ~PlF~LSQL~aYr~~~~~~~e~~Le~I-------------ed~~~Rnlil~Mi~rdPs~Rl---SAedyL~~ 291 (1431)
T KOG1240|consen 236 RPLFTLSQLLAYRSGNADDPEQLLEKI-------------EDVSLRNLILSMIQRDPSKRL---SAEDYLQK 291 (1431)
T ss_pred CCcccHHHHHhHhccCccCHHHHHHhC-------------cCccHHHHHHHHHccCchhcc---CHHHHHHh
Confidence 999942 1222222222 123689999999999999999 99999987
No 419
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=1.2e-20 Score=206.61 Aligned_cols=234 Identities=26% Similarity=0.375 Sum_probs=151.5
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-----------CcEEEEE---
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN-----------PFVVRFF--- 655 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H-----------PNIVkL~--- 655 (1003)
.+.....||.|+|+.||.+++..||+.+|+|+............+.+.+|.-....+.+ ..++.+-
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 36778899999999999999999999999999876554445556667666544433222 1122111
Q ss_pred -----eeeecc---c-----eEEEEEEeccCCChHHHHHh---cCCC---CHHHHHH-HHHHHHHHHHHHhhcCceeccC
Q 001857 656 -----YSFTCR---E-----NLYLVMEYLNGGDLYSLLRN---LGCL---DEDVARV-YIAEVVLALEYLHSLRVVHRDL 715 (1003)
Q Consensus 656 -----~~f~d~---~-----~lyLVmEy~~GGSL~d~L~~---~g~L---~Ee~ar~-Ia~QIL~ALeYLHs~GIIHRDI 715 (1003)
.++... . +.+++|+-+. ++|.+++.. .... ....++. +..|++..+++||+.||||+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 011111 1 3477888774 588877642 2222 1223333 3479999999999999999999
Q ss_pred CCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC
Q 001857 716 KPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT 795 (1003)
Q Consensus 716 KPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~ 795 (1003)
||+|++++.+|.++|+||+..... + ........+..|.+||.....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~--------------g--------------------~~~~~~~~~~~~~PPe~~~~~ 217 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRA--------------G--------------------TRYRCSEFPVAFTPPELESCA 217 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEET--------------T--------------------EEEEGGGS-TTTS-HHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeec--------------C--------------------ceeeccCCCcccCChhhhhhh
Confidence 999999999999999999876520 0 000112345779999987442
Q ss_pred --------CCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCc
Q 001857 796 --------GHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 796 --------~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kR 865 (1003)
.++.+.|.|+||+++|.|.+|..||........... .|.... ++++.+++||++||++||.+|
T Consensus 218 ~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 218 GQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp TSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 468899999999999999999999987654433222 223333 788999999999999999988
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.8e-20 Score=208.06 Aligned_cols=270 Identities=27% Similarity=0.389 Sum_probs=186.9
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCC-----------------------------------EEEEEEeeccccc-
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGD-----------------------------------LFAIKVLKKADMI- 628 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk-----------------------------------~VALKVIkks~i~- 628 (1003)
++.+++|++...||+|.-..||.|+...+|. +.|||++-.-...
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 5678999999999999999999987643110 2355654322111
Q ss_pred -cHHHHHHHHHHHH------HH--------Hh--------cCCCcEEEEEeeeecc------------------------
Q 001857 629 -RKNAVESILAERD------IL--------IS--------VRNPFVVRFFYSFTCR------------------------ 661 (1003)
Q Consensus 629 -~~~~ie~~lrEi~------IL--------~~--------L~HPNIVkL~~~f~d~------------------------ 661 (1003)
.....+.+.+|.- ++ +. -.|||||+++.+|.+.
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 1112222333321 11 11 2599999999888653
Q ss_pred ---ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeec--CCC--cEEEeecC
Q 001857 662 ---ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIA--HDG--HIKLTDFG 734 (1003)
Q Consensus 662 ---~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd--~dG--~VKLiDFG 734 (1003)
..+|+||...+. +|.+++... ..+....+.+++|+++|+.|||++||.|||+|.+|||+. +++ .+.|+|||
T Consensus 313 g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFG 390 (598)
T KOG4158|consen 313 GEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFG 390 (598)
T ss_pred CCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccc
Confidence 237999998865 999998763 467777888999999999999999999999999999994 444 57899999
Q ss_pred CccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC------CccceeechhH
Q 001857 735 LSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH------GTTADWWSVGI 808 (1003)
Q Consensus 735 LAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y------s~kSDIWSLGV 808 (1003)
.+-- +..+.+.-+..+. .-..-|....||||+....+- -.++|.|+.|.
T Consensus 391 CcLA---d~~hGlqlpy~S~----------------------~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~Ga 445 (598)
T KOG4158|consen 391 CCLA---DDNHGLQLPYESD----------------------EVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGA 445 (598)
T ss_pred eeee---ccccccccccccc----------------------cccCCCcceecchhhhhcCCCCceeeccchhhhhhhhh
Confidence 8752 2222222221110 112357778899999865321 24899999999
Q ss_pred HHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 809 ILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 809 ILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
+.||+++...||+......+--+- -..-.+|.+|..+++.+++|+..+|+.||.+|++..-|..+++--.|..
T Consensus 446 laYEIfg~~NPFY~rGem~L~~r~-Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~ 518 (598)
T KOG4158|consen 446 LAYEIFGRSNPFYKRGEMLLDTRT-YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRM 518 (598)
T ss_pred hHHHHhccCCcccccchheechhh-hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcC
Confidence 999999999999874332211111 1223467888999999999999999999999997655666666544443
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1e-19 Score=191.87 Aligned_cols=203 Identities=20% Similarity=0.231 Sum_probs=143.2
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-HHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-NAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~-~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyLVm 668 (1003)
+.+...|+.|+||+|+++.. .+..++.+.+........ -.-..+.+|+++|++|+ |++|++++++ +..|++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 34567899999999998875 567777776654332111 11235789999999995 5789999875 4569999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccC-CCcceeecCCCcEEEeecCCccccccCCCCCC
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDL-KPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDI-KPeNILLd~dG~VKLiDFGLAk~~~~~~~ddl 747 (1003)
||+.|.+|...+.. . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||+|.......
T Consensus 78 eyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~---- 146 (218)
T PRK12274 78 SYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA---- 146 (218)
T ss_pred eeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc----
Confidence 99999999765422 1 1357889999999999999999999 7999999999999999999997411000
Q ss_pred CCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccC-CCC-ccceeechhHHHHHHHhCCCCCCCCC
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGT-GHG-TTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 748 s~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~-~ys-~kSDIWSLGVILYELLTGk~PF~~~~ 824 (1003)
.....+.......-... -..+++.|++|+...-. ..+ ...+|++.|+-+|.++|+..|+.+++
T Consensus 147 ------------~~~r~L~~rDl~~llk~--~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 147 ------------RWMRLLAREDLRHLLKH--KRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred ------------hHHHHHHHHHHHHHHHH--HHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 00000000000000111 12378899999875432 223 57799999999999999999876544
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=5.8e-19 Score=185.79 Aligned_cols=135 Identities=16% Similarity=0.214 Sum_probs=108.4
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-----CCCcEEEEEeeeeccc---eEE
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-----RNPFVVRFFYSFTCRE---NLY 665 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-----~HPNIVkL~~~f~d~~---~ly 665 (1003)
.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.+ +||||+++|++++++. .+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 46799999999995 7777666 6898865422 2346789999999999 6799999999999874 444
Q ss_pred -EEEEe--ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHhhcCceeccCCCcceeecCC----CcEEEeecCCcc
Q 001857 666 -LVMEY--LNGGDLYSLLRNLGCLDEDVARVYIAEVVLAL-EYLHSLRVVHRDLKPDNLLIAHD----GHIKLTDFGLSK 737 (1003)
Q Consensus 666 -LVmEy--~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~AL-eYLHs~GIIHRDIKPeNILLd~d----G~VKLiDFGLAk 737 (1003)
+|||| +.+|+|.+++.+ +.+++. ..++.|++.++ +|||+++||||||||+|||++.. +.++|+||+.+.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 78999 558999999976 456666 35688888888 99999999999999999999743 479999954443
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.77 E-value=1.4e-18 Score=185.49 Aligned_cols=144 Identities=22% Similarity=0.134 Sum_probs=115.4
Q ss_pred CeEEEEEeeccCceEEEEEE-ECCCCCEEEEEEeecccccc---------------------HHHHHHHHHHHHHHHhcC
Q 001857 590 DFEIIKPISRGAFGRVFLAK-KRTTGDLFAIKVLKKADMIR---------------------KNAVESILAERDILISVR 647 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLAr-dk~tgk~VALKVIkks~i~~---------------------~~~ie~~lrEi~IL~~L~ 647 (1003)
.|++.+.||+|+||.||+|. +..+|+.||||++....... ......+.+|..++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 38889999999999999999 66789999999987543110 001134568999999997
Q ss_pred CC--cEEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC-ceeccCCCcceeecC
Q 001857 648 NP--FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLR-VVHRDLKPDNLLIAH 724 (1003)
Q Consensus 648 HP--NIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~G-IIHRDIKPeNILLd~ 724 (1003)
+. .+++++.. ...||||||++|++|...+.....+....+..++.||+.+|.+||.+| |+||||||+|||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 53 34455542 235899999999888776644456777778899999999999999999 99999999999999
Q ss_pred CCcEEEeecCCccc
Q 001857 725 DGHIKLTDFGLSKV 738 (1003)
Q Consensus 725 dG~VKLiDFGLAk~ 738 (1003)
++.++|+|||.|..
T Consensus 184 ~~~i~LiDFg~a~~ 197 (237)
T smart00090 184 DGKVVIIDVSQSVE 197 (237)
T ss_pred CCCEEEEEChhhhc
Confidence 88999999999873
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=5.5e-18 Score=173.75 Aligned_cols=137 Identities=29% Similarity=0.348 Sum_probs=114.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccc-----cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-----RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~-----~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
+.||+|++|.||+|.+ .|..+++|+....... .......+.+|..++..+.|++|+....++.+....+++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5799999999999987 6778999986543211 11223567889999999999988777666777778899999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
|++|++|.+++..... ....++.+|+.+|.+||+.|++|+|++|.|||++ ++.++|+|||+++.
T Consensus 80 ~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999999875432 7778999999999999999999999999999999 78999999999874
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=1.2e-18 Score=213.73 Aligned_cols=196 Identities=23% Similarity=0.357 Sum_probs=155.8
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeeccce
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR---NPFVVRFFYSFTCREN 663 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~---HPNIVkL~~~f~d~~~ 663 (1003)
..+.|.|-+.||+|+||+||+|.... |+.||||+-+....-.- .--.+++.+|+ -+.|..+..++.-.+.
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEf------YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEF------YICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceee------eehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 34569999999999999999999876 99999999776543211 11122333333 2345555555566677
Q ss_pred EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-------CCcEEEeecCCc
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-------DGHIKLTDFGLS 736 (1003)
Q Consensus 664 lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-------dG~VKLiDFGLA 736 (1003)
-+||+||.+.|+|.+++...+.+++..+.+++.|++..++.||..+|||+||||+|+||.. +--++|+|||-|
T Consensus 769 S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred ceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 8899999999999999998889999999999999999999999999999999999999953 345999999987
Q ss_pred cccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC
Q 001857 737 KVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG 816 (1003)
Q Consensus 737 k~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTG 816 (1003)
.-. .++ .........++|-.+-.+|+..|.++++.+|.|.|..++|.||.|
T Consensus 849 iDm----------------~lf-------------p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 849 IDM----------------KLF-------------PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred eee----------------eEc-------------CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 520 000 011234567889999999999999999999999999999999998
Q ss_pred CC
Q 001857 817 IP 818 (1003)
Q Consensus 817 k~ 818 (1003)
+.
T Consensus 900 ~y 901 (974)
T KOG1166|consen 900 KY 901 (974)
T ss_pred HH
Confidence 64
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=1.3e-19 Score=216.30 Aligned_cols=263 Identities=27% Similarity=0.439 Sum_probs=210.5
Q ss_pred cCCeEEEEEeeccCceEEEEEEEC-CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEE
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKR-TTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 588 lddYeIlk~LG~G~FGtVyLArdk-~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~ly 665 (1003)
...|.+.+.||+|+|+.|-++... .....+|+|.+.... .......++..|..+-..+. |+|++.+++.....+..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 456899999999999999999874 344567777765543 33445566677888888887 999999999999999999
Q ss_pred EEEEeccCCChHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHh-hcCceeccCCCcceeecCCC-cEEEeecCCcccccc
Q 001857 666 LVMEYLNGGDLYSLL-RNLG-CLDEDVARVYIAEVVLALEYLH-SLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLI 741 (1003)
Q Consensus 666 LVmEy~~GGSL~d~L-~~~g-~L~Ee~ar~Ia~QIL~ALeYLH-s~GIIHRDIKPeNILLd~dG-~VKLiDFGLAk~~~~ 741 (1003)
++++|..|++++..+ .... ..+...+..++.|+..+|.|+| ..++.||||||+|.+++..+ .++++|||+|.....
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999999 5554 6788889999999999999999 99999999999999999999 999999999984211
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccC-CCCCCCchhhccCC-CCccceeechhHHHHHHHhCCCC
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVG-TPDYLAPEILLGTG-HGTTADWWSVGIILFELIVGIPP 819 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vG-Tp~YmAPEVL~g~~-ys~kSDIWSLGVILYELLTGk~P 819 (1003)
. ..........+| ++.|+|||...+.. .+...|+||.|+++.-|++|..|
T Consensus 178 ~----------------------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p 229 (601)
T KOG0590|consen 178 K----------------------------NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELP 229 (601)
T ss_pred c----------------------------CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCC
Confidence 0 001123345688 99999999999854 47889999999999999999999
Q ss_pred CCCCChhhH-HHhhhccCCC-CCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 820 FNAEHPQQI-FDNILNRKIP-WPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 820 F~~~~~~ei-~qkIl~~~~~-~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
+........ +......... -......++..+.+++.++|..+|..|. +.+++..++|+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~---s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 230 WDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRL---SIEELKLDNWLSS 291 (601)
T ss_pred ccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcc---ccccccccccccc
Confidence 975443322 1222222111 1234567899999999999999999999 8999999999987
No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.75 E-value=1.1e-18 Score=186.57 Aligned_cols=242 Identities=20% Similarity=0.333 Sum_probs=194.8
Q ss_pred CcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
++.+.+..++.+|.+...|..|++++.. .-++.|+++...... .....|..|.--|+...||||+.+++.+....++
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsppnl 262 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSPPNL 262 (448)
T ss_pred CcchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCCCCc
Confidence 5667788889999999999999999954 345668776544332 2335677888888889999999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhcC--ceeccCCCcceeecCCCcEEEe--ecCCccc
Q 001857 665 YLVMEYLNGGDLYSLLRNLGC--LDEDVARVYIAEVVLALEYLHSLR--VVHRDLKPDNLLIAHDGHIKLT--DFGLSKV 738 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~--L~Ee~ar~Ia~QIL~ALeYLHs~G--IIHRDIKPeNILLd~dG~VKLi--DFGLAk~ 738 (1003)
.++..||+-|+|+.+++.... .+..++..++.+|+.|++|||+.. |----|....++||++.+.+|. |--++.
T Consensus 263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf- 341 (448)
T KOG0195|consen 263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF- 341 (448)
T ss_pred eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee-
Confidence 999999999999999987643 678889999999999999999874 3334578888999998776653 222221
Q ss_pred cccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCC---CccceeechhHHHHHHHh
Q 001857 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH---GTTADWWSVGIILFELIV 815 (1003)
Q Consensus 739 ~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y---s~kSDIWSLGVILYELLT 815 (1003)
......-.|.||+||.+...+- -.++|+|||.+++|||.|
T Consensus 342 -------------------------------------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~t 384 (448)
T KOG0195|consen 342 -------------------------------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNT 384 (448)
T ss_pred -------------------------------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhc
Confidence 0112345788999999987654 357999999999999999
Q ss_pred CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCC
Q 001857 816 GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS 868 (1003)
Q Consensus 816 Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~ 868 (1003)
...||..-.+.+.-.+|.-.... +.+|++++.....|+.-|+..||.+||.+
T Consensus 385 revpfadlspmecgmkialeglr-v~ippgis~hm~klm~icmnedpgkrpkf 436 (448)
T KOG0195|consen 385 REVPFADLSPMECGMKIALEGLR-VHIPPGISRHMNKLMNICMNEDPGKRPKF 436 (448)
T ss_pred cccccccCCchhhhhhhhhcccc-ccCCCCccHHHHHHHHHHhcCCCCcCCCc
Confidence 99999999888877777655543 57889999999999999999999999943
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=1.8e-17 Score=168.71 Aligned_cols=133 Identities=26% Similarity=0.287 Sum_probs=107.4
Q ss_pred EeeccCceEEEEEEECCCCCEEEEEEeeccccc-----cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEe
Q 001857 596 PISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-----RKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~-----~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy 670 (1003)
.||+|+||.||+|.. ++..+++|+....... .......+.+|..++..+.|+++.....++......++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 389999999999985 5788999986542211 122346778899999999887655444444556677999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 671 ~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
++|++|.+++..... .++.|++.+|.+||+.||+|+|++|.|||++ ++.++++|||+++.
T Consensus 79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999998765321 7889999999999999999999999999999 89999999999874
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.72 E-value=2.5e-17 Score=169.13 Aligned_cols=136 Identities=20% Similarity=0.208 Sum_probs=107.7
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-------------------HHHHHHHHHHHHHHhcCCC--
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-------------------NAVESILAERDILISVRNP-- 649 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~-------------------~~ie~~lrEi~IL~~L~HP-- 649 (1003)
|.+.+.||.|+||.||+|... +|+.||||++........ .......+|..++..+.|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 777889999999999999874 799999999765321000 0112356788888888777
Q ss_pred cEEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEE
Q 001857 650 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIK 729 (1003)
Q Consensus 650 NIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VK 729 (1003)
.++..+. ....|+||||++|++|..+... .....++.+|+.++.++|+.||+||||||+||+++.++.++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 4444443 2345899999999998765431 34567889999999999999999999999999999999999
Q ss_pred EeecCCcc
Q 001857 730 LTDFGLSK 737 (1003)
Q Consensus 730 LiDFGLAk 737 (1003)
|+|||++.
T Consensus 166 liDfg~~~ 173 (198)
T cd05144 166 IIDWPQMV 173 (198)
T ss_pred EEECCccc
Confidence 99999986
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=9.2e-17 Score=189.49 Aligned_cols=138 Identities=25% Similarity=0.232 Sum_probs=111.6
Q ss_pred CeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccc-----cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKAD-----MIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~-----i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~l 664 (1003)
.|...+.||+|+||+||++.+... .+++|+..... .......+.+.+|..++..++|++|+..+.++.+....
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 356678999999999999987543 34444332211 11122346788999999999999998877777777778
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
++||||++|++|.+++. ....++.||+.+|.|||+.||+||||||+|||+ .++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999999886 346789999999999999999999999999999 678999999999984
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.69 E-value=1e-16 Score=161.34 Aligned_cols=136 Identities=22% Similarity=0.269 Sum_probs=98.8
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHH---------------------HHHHHHHHHHhcCCC--c
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVE---------------------SILAERDILISVRNP--F 650 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie---------------------~~lrEi~IL~~L~HP--N 650 (1003)
.+.||+|+||+||+|.+. +++.||||++............ ....|...+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999986 8999999998764322111111 113566666666443 2
Q ss_pred EEEEEeeeeccceEEEEEEeccCCChHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcE
Q 001857 651 VVRFFYSFTCRENLYLVMEYLNGGDLYSL-LRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHI 728 (1003)
Q Consensus 651 IVkL~~~f~d~~~lyLVmEy~~GGSL~d~-L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~V 728 (1003)
+.+.+.. ...++||||++|+.+... +.... . ...++.++.+++.++.++|. +||+||||||+||+++ ++.+
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~ 153 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKV 153 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcE
Confidence 4445443 235899999999544321 21111 1 16678899999999999999 9999999999999999 8999
Q ss_pred EEeecCCcc
Q 001857 729 KLTDFGLSK 737 (1003)
Q Consensus 729 KLiDFGLAk 737 (1003)
+|+|||.+.
T Consensus 154 ~liDfg~a~ 162 (187)
T cd05119 154 YIIDVPQAV 162 (187)
T ss_pred EEEECcccc
Confidence 999999986
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.67 E-value=2.3e-17 Score=189.48 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=166.3
Q ss_pred CCeEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEe-------ee
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFY-------SF 658 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~t---gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~-------~f 658 (1003)
..+.+.+..+.++++.++..+-..+ ...+.-|..+. ..........+++-.+....|-+..-+.+ .+
T Consensus 244 ~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~---d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~ 320 (516)
T KOG1033|consen 244 GSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADV---DSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESS 320 (516)
T ss_pred ccccccccccccccCCchhhhhcccchhhhhccchhhhc---cchhhhhhhhhhhhheeccccCCcccccCCCCchhhhc
Confidence 3456666677777777776654333 22333222211 11122333444444444443333222221 11
Q ss_pred e-----ccceEEEEEEeccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEE
Q 001857 659 T-----CRENLYLVMEYLNGGDLYSLLRNLG---CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKL 730 (1003)
Q Consensus 659 ~-----d~~~lyLVmEy~~GGSL~d~L~~~g---~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKL 730 (1003)
. ...++||.|++|.-.+|.++|.+.. ..+......++.|++.|++| +|.+|||+||.||++..+..+||
T Consensus 321 ~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kI 397 (516)
T KOG1033|consen 321 KRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKI 397 (516)
T ss_pred cccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhh
Confidence 1 1236899999999999999997543 35677788899999999999 99999999999999999999999
Q ss_pred eecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHH
Q 001857 731 TDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIIL 810 (1003)
Q Consensus 731 iDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVIL 810 (1003)
.|||+........ .+ . .........+||..||+||.+.+..|+.++||||||+||
T Consensus 398 gDFgl~ts~~~~~-----~~--------------~------~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil 452 (516)
T KOG1033|consen 398 GDFGLVTSQDKDE-----TV--------------A------PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLIL 452 (516)
T ss_pred hhhhheeecccCC-----cc--------------c------chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHH
Confidence 9999976311100 00 0 001223457899999999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 811 FELIV-GIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 811 YELLT-Gk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
+|++. -..+|. ...++..+.++.++ |.+..+. ++-.+|+.+||...|.+|| ++.+.--|+|.
T Consensus 453 ~EL~~~f~T~~e---r~~t~~d~r~g~ip-~~~~~d~-p~e~~ll~~lls~~p~~RP---~~~~~~~~~~~ 515 (516)
T KOG1033|consen 453 AELLIQFSTQFE---RIATLTDIRDGIIP-PEFLQDY-PEEYTLLQQLLSPSPEERP---SAIEVALHEFL 515 (516)
T ss_pred HHHHHHhccHHH---HHHhhhhhhcCCCC-hHHhhcC-cHHHHHHHHhcCCCcccCc---hHHHHhhhhhc
Confidence 99997 333332 12233344444332 1222222 4566899999999999999 77777777664
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.64 E-value=1.7e-15 Score=142.77 Aligned_cols=132 Identities=23% Similarity=0.305 Sum_probs=112.3
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--CcEEEEEeeeeccceEEEEEEe
Q 001857 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN--PFVVRFFYSFTCRENLYLVMEY 670 (1003)
Q Consensus 593 Ilk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H--PNIVkL~~~f~d~~~lyLVmEy 670 (1003)
+++.||.|.++.||++.... ..+++|+...... ...+.+|..++..+.| .++++++..+...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 46789999999999999743 7899999865432 3567889999999976 5899999988888889999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc---CceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 671 LNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL---RVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 671 ~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~---GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
++|+.+..+ +......++.+++.+|.+||.. +++|+||+|+|||++..+.++++|||++..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 999877654 4556667889999999999984 799999999999999999999999999874
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.61 E-value=5.1e-15 Score=158.34 Aligned_cols=137 Identities=20% Similarity=0.327 Sum_probs=106.0
Q ss_pred EEee-ccCceEEEEEEECCCCCEEEEEEeeccccc----------cHHHHHHHHHHHHHHHhcCCCcE--EEEEeeeecc
Q 001857 595 KPIS-RGAFGRVFLAKKRTTGDLFAIKVLKKADMI----------RKNAVESILAERDILISVRNPFV--VRFFYSFTCR 661 (1003)
Q Consensus 595 k~LG-~G~FGtVyLArdk~tgk~VALKVIkks~i~----------~~~~ie~~lrEi~IL~~L~HPNI--VkL~~~f~d~ 661 (1003)
..|| .||.|+||.+... +..++||.+...... .......+.+|..++..+.|++| ++.+......
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 7888889988763 778999988653221 11233567889999999998774 6666654332
Q ss_pred c----eEEEEEEeccC-CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCc
Q 001857 662 E----NLYLVMEYLNG-GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 662 ~----~lyLVmEy~~G-GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
. ..+||||+++| .+|.+++.. +.+++.. +.||+.+|.+||++||+||||||+|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 2 23599999997 689988865 4566543 568999999999999999999999999999999999999998
Q ss_pred cc
Q 001857 737 KV 738 (1003)
Q Consensus 737 k~ 738 (1003)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 74
No 435
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.58 E-value=8e-15 Score=170.39 Aligned_cols=197 Identities=27% Similarity=0.377 Sum_probs=151.2
Q ss_pred HHhcCCCcEEEEEeeeeccceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCc-eeccCCCcce
Q 001857 643 LISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVLALEYLHSLRV-VHRDLKPDNL 720 (1003)
Q Consensus 643 L~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~ALeYLHs~GI-IHRDIKPeNI 720 (1003)
|+.+.|.|+.++++.+.+...+++|.+||.-|+|.+.+... ..++.-....++++|+.||+|||.-.| .|+.++..|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 35678999999999999999999999999999999999873 457777778889999999999998766 9999999999
Q ss_pred eecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCC----
Q 001857 721 LIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTG---- 796 (1003)
Q Consensus 721 LLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~---- 796 (1003)
+++..+.+||+|||+...... ... ..... ...-..-|.|||.+.+..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~--~~~--------------~~~~~-------------~~~~~~lw~aPellr~~~~~~~ 131 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEE--TAE--------------PEAHH-------------PIRKALLWTAPELLRGALSQSL 131 (484)
T ss_pred eeeeeEEEEechhhhcccccc--ccc--------------ccccc-------------hhHHHHhccCHHHhcccccccc
Confidence 999999999999999764210 000 00000 001123589999998742
Q ss_pred ---CCccceeechhHHHHHHHhCCCCCCCC----ChhhHHHhhhccCC--CCCCCC--CCCCHHHHHHHHhhccCCcCCc
Q 001857 797 ---HGTTADWWSVGIILFELIVGIPPFNAE----HPQQIFDNILNRKI--PWPRVP--EEMSPEAHDLIDRFLTEDPHQR 865 (1003)
Q Consensus 797 ---ys~kSDIWSLGVILYELLTGk~PF~~~----~~~ei~qkIl~~~~--~~P~lp--~~iS~elkDLIrrcL~kDP~kR 865 (1003)
.+.+.||||+|+++||+++...||... .+.++...+.+... ..|.+. ....+++..++++||..+|..|
T Consensus 132 ~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~r 211 (484)
T KOG1023|consen 132 ESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKR 211 (484)
T ss_pred cccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhC
Confidence 356799999999999999999999752 33456656555121 223332 1456689999999999999999
Q ss_pred CCC
Q 001857 866 LGS 868 (1003)
Q Consensus 866 Pg~ 868 (1003)
|..
T Consensus 212 Ps~ 214 (484)
T KOG1023|consen 212 PSI 214 (484)
T ss_pred ccH
Confidence 943
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=6.2e-14 Score=163.52 Aligned_cols=260 Identities=24% Similarity=0.250 Sum_probs=195.0
Q ss_pred CeEEEEEeec--cCceEEEEEEE--CCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceE
Q 001857 590 DFEIIKPISR--GAFGRVFLAKK--RTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 590 dYeIlk~LG~--G~FGtVyLArd--k~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~l 664 (1003)
.|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+... .....-.+=++|....+.+ .|++.++.+..+...+.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 3777888999 99999999998 8899999999743321 1111112334566666666 489999999999999999
Q ss_pred EEEEEeccCCChHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHhhcCceeccCCCcceeecCC-CcEEEeecCCccc
Q 001857 665 YLVMEYLNGGDLYSLLRNLGC-LDEDVARVYIAEVVL----ALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKV 738 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~-L~Ee~ar~Ia~QIL~----ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~ 738 (1003)
|+-+|+|. .+|..+...... +++..++.++.+... ||.++|+.+|+|-|+||.||++..+ ...+++|||+...
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred eeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence 99999995 688888877654 899999999999999 9999999999999999999999999 8899999999763
Q ss_pred cccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCC
Q 001857 739 GLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIP 818 (1003)
Q Consensus 739 ~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~ 818 (1003)
.... .+. ..........|...|++||.+.+. ++...||++||.++.+-.+|..
T Consensus 273 i~~~---~~~-----------------------~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~ 325 (524)
T KOG0601|consen 273 ISDG---NFS-----------------------SVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSH 325 (524)
T ss_pred ccCC---ccc-----------------------cceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcc
Confidence 1000 000 000111233577889999998765 8899999999999999999876
Q ss_pred CCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCCCC
Q 001857 819 PFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 819 PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk~I 883 (1003)
++...... .+..+.+...+ .++....+.++...+..|+..+|..|+ ++..+++|++....
T Consensus 326 ~~~~g~~~-~W~~~r~~~ip-~e~~~~~s~~l~~~~~~~~d~~~~~~~---~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 326 LPSVGKNS-SWSQLRQGYIP-LEFCEGGSSSLRSVTSQMLDEDPRLRL---TAQILTALNVIHSK 385 (524)
T ss_pred cccCCCCC-CccccccccCc-hhhhcCcchhhhhHHHHhcCcchhhhh---HHHHHhccccccch
Confidence 66433111 11122122111 234456677888899999999999999 99999999999843
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.40 E-value=2e-13 Score=161.56 Aligned_cols=144 Identities=23% Similarity=0.354 Sum_probs=97.1
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc-------------------------------cHHHHHH
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-------------------------------RKNAVES 635 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~-------------------------------~~~~ie~ 635 (1003)
.+.+|+. +.||.|++|.||+|+.+.+|+.||||++.+.... -.+..+.
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 4566887 8999999999999999888999999999753100 0011223
Q ss_pred HHHHHHH------HHhc----CCCcEEEEEeeeec-cceEEEEEEeccCCChHHH--HHhcC----CCCHHHHHHHHHHH
Q 001857 636 ILAERDI------LISV----RNPFVVRFFYSFTC-RENLYLVMEYLNGGDLYSL--LRNLG----CLDEDVARVYIAEV 698 (1003)
Q Consensus 636 ~lrEi~I------L~~L----~HPNIVkL~~~f~d-~~~lyLVmEy~~GGSL~d~--L~~~g----~L~Ee~ar~Ia~QI 698 (1003)
+.+|+++ +.++ .+...+.+-.+|.+ ...-+|||||+.|+.|.++ +...+ .+.+..+..++.|+
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 3334443 3333 13222222222222 3346799999999999874 33333 24455555555555
Q ss_pred HHHHHHHhhcCceeccCCCcceeecCCC----cEEEeecCCccc
Q 001857 699 VLALEYLHSLRVVHRDLKPDNLLIAHDG----HIKLTDFGLSKV 738 (1003)
Q Consensus 699 L~ALeYLHs~GIIHRDIKPeNILLd~dG----~VKLiDFGLAk~ 738 (1003)
+ ..|++|+|+||.||+++.+| .++++|||++..
T Consensus 277 f-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~ 313 (537)
T PRK04750 277 F-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGS 313 (537)
T ss_pred H-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEE
Confidence 4 58999999999999999988 999999999763
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=3.3e-12 Score=148.18 Aligned_cols=138 Identities=22% Similarity=0.298 Sum_probs=95.7
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccH-------------------------------HHH------HHHH
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK-------------------------------NAV------ESIL 637 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~-------------------------------~~i------e~~l 637 (1003)
+.||.|++|.||+|+.+ +|+.||||+.+......- +.. -.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 67999999999999974 789999999865310000 000 1234
Q ss_pred HHHHHHHhcC-----CCcE--EEEEeeeeccceEEEEEEeccCCChHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHhhc
Q 001857 638 AERDILISVR-----NPFV--VRFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDVARVYIAEVVL-ALEYLHSL 708 (1003)
Q Consensus 638 rEi~IL~~L~-----HPNI--VkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~-g~L~Ee~ar~Ia~QIL~-ALeYLHs~ 708 (1003)
+|...+.++. +++| .++|..+ ....+|||||++|++|.++.... ..+. ...++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR--TSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh--cCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence 4555555442 3433 2333222 33468999999999998876532 1222 2345555555 47889999
Q ss_pred CceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 709 RVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 709 GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
|++|+|+||.||+++.+|.++|+|||++..
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~ 306 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVGR 306 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence 999999999999999999999999999874
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.34 E-value=3.5e-12 Score=126.01 Aligned_cols=128 Identities=19% Similarity=0.306 Sum_probs=96.1
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEEEEeeeeccceEEEEEEecc
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRENLYLVMEYLN 672 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPN-IVkL~~~f~d~~~lyLVmEy~~ 672 (1003)
++.|+.|.++.||+++.. +..|++|+...... ....+.+|..++..+.+.+ +++++.... ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 567899999999999864 77899998754321 1123567888888876544 345554433 23579999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCc-----eeccCCCcceeecCCCcEEEeecCCccc
Q 001857 673 GGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRV-----VHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 673 GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GI-----IHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
|.++... ......++.+++.+|..||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9887643 01123467899999999999885 9999999999999 67899999999874
No 440
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=2.4e-12 Score=150.50 Aligned_cols=249 Identities=26% Similarity=0.278 Sum_probs=187.0
Q ss_pred ccCCeEEEEEeeccCceEEEEEEEC-CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccceE
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKR-TTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk-~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L-~HPNIVkL~~~f~d~~~l 664 (1003)
.+.+|..+..||.|.|+.|+.+..+ .++..|++|.+.+........ ..-+.|+.+...+ .|.+++.++..|...++.
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3568999999999999999998766 688899999877644332222 2234455555555 588999999888888889
Q ss_pred EEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC-CcEEEeecCCccccccCC
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD-GHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d-G~VKLiDFGLAk~~~~~~ 743 (1003)
|+-.|||.|+++...+.-...+.+...+....|++.++.++|+..++|+|+||+||++..+ +.-++.|||..+....
T Consensus 342 ~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~-- 419 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF-- 419 (524)
T ss_pred cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce--
Confidence 9999999999998887666678999999999999999999999999999999999999886 7788999998752000
Q ss_pred CCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCC--CchhhccCCCCccceeechhHHHHHHHhCCCC-C
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYL--APEILLGTGHGTTADWWSVGIILFELIVGIPP-F 820 (1003)
Q Consensus 744 ~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~Ym--APEVL~g~~ys~kSDIWSLGVILYELLTGk~P-F 820 (1003)
......++-+++ +|+......+..+.|++|||..+++.++|.+. .
T Consensus 420 --------------------------------~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~ 467 (524)
T KOG0601|consen 420 --------------------------------SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE 467 (524)
T ss_pred --------------------------------ecccccccccccccchhhccccccccccccccccccccccccCcccCc
Confidence 001122233344 55555567789999999999999999998753 2
Q ss_pred CCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCC
Q 001857 821 NAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFF 880 (1003)
Q Consensus 821 ~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFF 880 (1003)
.+.. ...|..+.. |..+. .+.++..+.+.++..++..|+ .+.++..|.=|
T Consensus 468 ~~~~----~~~i~~~~~--p~~~~-~~~~~q~~~kv~~~~~~~~~~---l~~~l~~~~~~ 517 (524)
T KOG0601|consen 468 SGVQ----SLTIRSGDT--PNLPG-LKLQLQVLLKVMINPDRKRRP---SAVELSLHSEF 517 (524)
T ss_pred cccc----ceeeecccc--cCCCc-hHHhhhhhhhhhcCCccccch---hhhhhcccchh
Confidence 2222 223333333 33333 348899999999999999999 78888777644
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.28 E-value=3.5e-11 Score=126.26 Aligned_cols=138 Identities=22% Similarity=0.181 Sum_probs=101.4
Q ss_pred EEeeccCceEEEEEEECC------CCCEEEEEEeeccccc-------------------cHHHHHHHH----HHHHHHHh
Q 001857 595 KPISRGAFGRVFLAKKRT------TGDLFAIKVLKKADMI-------------------RKNAVESIL----AERDILIS 645 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~------tgk~VALKVIkks~i~-------------------~~~~ie~~l----rEi~IL~~ 645 (1003)
..||.|--+.||.|.... .+..+|||+.+..... ..+....+. +|...|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998643 3579999998642100 011122333 79999988
Q ss_pred cCC--CcEEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hhcCceeccCCCcceee
Q 001857 646 VRN--PFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYL-HSLRVVHRDLKPDNLLI 722 (1003)
Q Consensus 646 L~H--PNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYL-Hs~GIIHRDIKPeNILL 722 (1003)
+.. -++++.+.+ ..-+|||||+.+..+..-.-+...+++..+..+..+++.+|..| |+.||||+||++.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 853 456666654 45689999997755533222333466667778889999999999 89999999999999999
Q ss_pred cCCCcEEEeecCCcc
Q 001857 723 AHDGHIKLTDFGLSK 737 (1003)
Q Consensus 723 d~dG~VKLiDFGLAk 737 (1003)
. ++.+.|+|||.|.
T Consensus 159 ~-~~~v~iIDF~qav 172 (197)
T cd05146 159 H-DGKVWFIDVSQSV 172 (197)
T ss_pred E-CCcEEEEECCCce
Confidence 6 5789999999986
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.23 E-value=8.8e-11 Score=139.05 Aligned_cols=169 Identities=21% Similarity=0.349 Sum_probs=129.4
Q ss_pred EEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCC
Q 001857 607 LAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCL 686 (1003)
Q Consensus 607 LArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L 686 (1003)
.|..+.++.+|.+.+++.... ...+.+.+-+..|+.++||||++++..++..+.+|||+|.+. -|..++++.+
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-- 102 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-- 102 (690)
T ss_pred ccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH--
Confidence 456678889999998876532 445667778888999999999999999999999999999985 5677777644
Q ss_pred CHHHHHHHHHHHHHHHHHHh-hcCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccc
Q 001857 687 DEDVARVYIAEVVLALEYLH-SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQL 765 (1003)
Q Consensus 687 ~Ee~ar~Ia~QIL~ALeYLH-s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~l 765 (1003)
...+...+.||+.||.||| .++++|++|.-.-|+++..|+.||++|-++.... +...
T Consensus 103 -~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~-------------~~~~-------- 160 (690)
T KOG1243|consen 103 -KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS-------------GFNA-------- 160 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc-------------cCCc--------
Confidence 6777788999999999997 6789999999999999999999999998865210 0000
Q ss_pred hhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhC
Q 001857 766 TASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVG 816 (1003)
Q Consensus 766 t~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTG 816 (1003)
......---.|..|+.+.... ...|.|.|||++||++.|
T Consensus 161 ----------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 161 ----------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ----------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 000011112366676654332 567999999999999988
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.13 E-value=2.4e-10 Score=116.80 Aligned_cols=141 Identities=18% Similarity=0.246 Sum_probs=106.5
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--CcEEEEEeeeecc---ceEEEEE
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN--PFVVRFFYSFTCR---ENLYLVM 668 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H--PNIVkL~~~f~d~---~~lyLVm 668 (1003)
++.||.|.++.||++... +|+.|++|+....... .....+.+|..++..+.+ ..+++++.+.... +..|+||
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 367899999999999874 3688999987654321 123567889999998865 3456677666553 3678999
Q ss_pred EeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-----------------------------------------
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS----------------------------------------- 707 (1003)
Q Consensus 669 Ey~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs----------------------------------------- 707 (1003)
||++|.+|...+.. ..+++.....++.+++.+|.+||+
T Consensus 80 e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 80 ERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred EEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99999888765532 356667777777777777777773
Q ss_pred ---------------cCceeccCCCcceeecC--CCcEEEeecCCccc
Q 001857 708 ---------------LRVVHRDLKPDNLLIAH--DGHIKLTDFGLSKV 738 (1003)
Q Consensus 708 ---------------~GIIHRDIKPeNILLd~--dG~VKLiDFGLAk~ 738 (1003)
..++|+|++|.|||++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 24699999999999998 67789999998874
No 444
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=8.6e-11 Score=129.68 Aligned_cols=213 Identities=24% Similarity=0.354 Sum_probs=151.4
Q ss_pred HHHHHhcCCCcEEEEEeeeeccc-----eEEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcC-
Q 001857 640 RDILISVRNPFVVRFFYSFTCRE-----NLYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSLR- 709 (1003)
Q Consensus 640 i~IL~~L~HPNIVkL~~~f~d~~-----~lyLVmEy~~GGSL~d~L~~~----g~L~Ee~ar~Ia~QIL~ALeYLHs~G- 709 (1003)
.+-|..+.|-|||+++.++.+.. ...++.|||..|+|.++|++. ..+.....++++-||+.||.|||+..
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 34455667999999998887654 478999999999999999754 45888889999999999999999985
Q ss_pred -ceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCC
Q 001857 710 -VVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLA 788 (1003)
Q Consensus 710 -IIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmA 788 (1003)
|+|+++.-+-|++..+|-||+. .... +.++ +.+ .......+....|-++|.|
T Consensus 198 piihgnlTc~tifiq~ngLIkig---~~ap---~s~h----~s~-----------------~~~~~~Ek~~~~~~~g~~a 250 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIG---SVAP---DSTH----PSV-----------------NSTREAEKSVNTSLPGFSA 250 (458)
T ss_pred ccccCCcchhheeecCCceEEec---ccCc---cccc----hhh-----------------hhhhHhhhhccccCCcccc
Confidence 9999999999999999988873 2110 0010 000 0001112223457789999
Q ss_pred chhhccCCCCccceeechhHHHHHHHhCCCC-CCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCC
Q 001857 789 PEILLGTGHGTTADWWSVGIILFELIVGIPP-FNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLG 867 (1003)
Q Consensus 789 PEVL~g~~ys~kSDIWSLGVILYELLTGk~P-F~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg 867 (1003)
||.=.....+-++|||++|....||..+..- -.+.+....-..|.+.-.. --..--+++|++||+..|..||
T Consensus 251 ~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~------len~lqr~~i~kcl~~eP~~rp- 323 (458)
T KOG1266|consen 251 PESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG------LENGLQRGSITKCLEGEPNGRP- 323 (458)
T ss_pred CCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee------ccCccccCcCcccccCCCCCCc-
Confidence 9976666667899999999999999987643 3333322222222221111 0112236789999999999999
Q ss_pred CCCHHHHHcCCCCCCCChhHH
Q 001857 868 SGGASEVKQHVFFKDINWDTL 888 (1003)
Q Consensus 868 ~~TAeELLqHPFFk~Idwd~L 888 (1003)
++.+++.||.+-++.-..+
T Consensus 324 --~ar~llfHpllfeVhslkl 342 (458)
T KOG1266|consen 324 --DARLLLFHPLLFEVHSLKL 342 (458)
T ss_pred --chhhhhcCceeeecchHHH
Confidence 9999999998877655444
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.1e-09 Score=113.85 Aligned_cols=134 Identities=27% Similarity=0.279 Sum_probs=100.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEee-c----cccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEE
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLK-K----ADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVME 669 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIk-k----s~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmE 669 (1003)
..+++|+-+.++.+... |..+.+|.=. | +.+..+-..++..+|..++..+.--.|..-+-++.+.....|+||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999999763 4456666422 2 223333344677889999988865544444444566677789999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
|++|-.|.+.+... . -.++..+-.-+.-||..||||+||.++||++...+ +.++||||+.+
T Consensus 80 ~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999999888765 1 35667777788889999999999999999997765 99999999984
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.92 E-value=9.4e-09 Score=106.96 Aligned_cols=144 Identities=22% Similarity=0.250 Sum_probs=106.7
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEe-----eccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEE
Q 001857 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVL-----KKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 593 Ilk~LG~G~FGtVyLArdk~tgk~VALKVI-----kks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.+..|-+|+-+.|+++.+ .|+.+.||.= ..+.+...-...+..+|..+|.++.--.|.--.-+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567889999999999976 5788777742 223333344456788899999887643433333345666667899
Q ss_pred EEeccC-CChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCC---cEEEeecCCccc
Q 001857 668 MEYLNG-GDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG---HIKLTDFGLSKV 738 (1003)
Q Consensus 668 mEy~~G-GSL~d~L~~~g--~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG---~VKLiDFGLAk~ 738 (1003)
|||++| .++.+++.... .........++.+|-..|.-||..+|||+||..+||++..+| .+.|+|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999987 57888886542 233333367888999999999999999999999999997755 358999999863
No 447
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.76 E-value=3.9e-08 Score=102.71 Aligned_cols=126 Identities=24% Similarity=0.280 Sum_probs=82.7
Q ss_pred EEEEEEECCCCCEEEEEEeecccc-----------------------ccHHHHHHHHHHHHHHHhcCCC--cEEEEEeee
Q 001857 604 RVFLAKKRTTGDLFAIKVLKKADM-----------------------IRKNAVESILAERDILISVRNP--FVVRFFYSF 658 (1003)
Q Consensus 604 tVyLArdk~tgk~VALKVIkks~i-----------------------~~~~~ie~~lrEi~IL~~L~HP--NIVkL~~~f 658 (1003)
.||.|.. ..|..+|||+.+.... ..........+|...|..+..- ++++++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3899987 4678999999764210 0111235677899999999765 566676442
Q ss_pred eccceEEEEEEecc--CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HhhcCceeccCCCcceeecCCCcEEEeecCC
Q 001857 659 TCRENLYLVMEYLN--GGDLYSLLRNLGCLDEDVARVYIAEVVLALEY-LHSLRVVHRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 659 ~d~~~lyLVmEy~~--GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeY-LHs~GIIHRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
.-+|||||+. |..+..+.... ++.+....++.+++..+.. +|+.||||+||.+.|||++.+ .+.|+|||.
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred ----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCc
Confidence 3379999998 65554433321 1234456677788885555 589999999999999999887 899999999
Q ss_pred cc
Q 001857 736 SK 737 (1003)
Q Consensus 736 Ak 737 (1003)
+.
T Consensus 153 av 154 (188)
T PF01163_consen 153 AV 154 (188)
T ss_dssp EE
T ss_pred ce
Confidence 87
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.75 E-value=1.6e-07 Score=103.09 Aligned_cols=131 Identities=15% Similarity=0.099 Sum_probs=91.2
Q ss_pred EEEEEECCCCCEEEEEEeecccccc--H------HHHHHHHHHHHHHHhcCCCc--EEEEEeeeec-----cceEEEEEE
Q 001857 605 VFLAKKRTTGDLFAIKVLKKADMIR--K------NAVESILAERDILISVRNPF--VVRFFYSFTC-----RENLYLVME 669 (1003)
Q Consensus 605 VyLArdk~tgk~VALKVIkks~i~~--~------~~ie~~lrEi~IL~~L~HPN--IVkL~~~f~d-----~~~lyLVmE 669 (1003)
|+.+.. .|+.|.||......... + .-...+.+|...+..+..-+ ++.+..++.. ....+||||
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 445543 45678888654322110 0 01113678888887774322 2233333332 235789999
Q ss_pred eccCC-ChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecC-------CCcEEEeecCCcc
Q 001857 670 YLNGG-DLYSLLRN--LGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAH-------DGHIKLTDFGLSK 737 (1003)
Q Consensus 670 y~~GG-SL~d~L~~--~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~-------dG~VKLiDFGLAk 737 (1003)
+++|- +|.+++.. ....+......++.+++..+.-||..||+|+|+++.|||++. ++.+.|+||+.+.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 99885 89999864 245667778899999999999999999999999999999975 4679999999875
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.71 E-value=1.4e-08 Score=121.08 Aligned_cols=168 Identities=22% Similarity=0.333 Sum_probs=120.1
Q ss_pred HHHHHHHHHHhh-cCceeccCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhh
Q 001857 696 AEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQER 774 (1003)
Q Consensus 696 ~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~ 774 (1003)
.+.+.||.|+|. .++||+.|.|++|.++.+|..||+.|+++...... ++ ..+..+ .+.+
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~-~~-------~p~~~y---d~~l--------- 165 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGP-TE-------YPFSEY---DPPL--------- 165 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCC-Cc-------cccccC---CCCC---------
Confidence 345599999996 58999999999999999999999999987631110 00 001111 0111
Q ss_pred hccccccCCCCCCCchhhccCCCCccceeechhHHHHHHH-hCCCCCCCCChhhHHHhhhc-cCCCCCCCCCCCCHHHHH
Q 001857 775 RKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELI-VGIPPFNAEHPQQIFDNILN-RKIPWPRVPEEMSPEAHD 852 (1003)
Q Consensus 775 ~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELL-TGk~PF~~~~~~ei~qkIl~-~~~~~P~lp~~iS~elkD 852 (1003)
.....-...|.|||++.+..-+.++|++||||++|.+. .|+.-|.+.+....+..-.. .....-.+...+++++++
T Consensus 166 --p~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~ 243 (700)
T KOG2137|consen 166 --PLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRE 243 (700)
T ss_pred --ChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHH
Confidence 11223456799999999988899999999999999999 67777765544333322221 111112234678999999
Q ss_pred HHHhhccCCcCCcCCCCCHHHHHcCCCCCCCChhHH
Q 001857 853 LIDRFLTEDPHQRLGSGGASEVKQHVFFKDINWDTL 888 (1003)
Q Consensus 853 LIrrcL~kDP~kRPg~~TAeELLqHPFFk~Idwd~L 888 (1003)
-|.++|..++..|| ++.+++.-|||.+..-..|
T Consensus 244 ~l~k~l~~~~~~rp---~~~~l~~~~ff~D~~~~aL 276 (700)
T KOG2137|consen 244 SLKKLLNGDSAVRP---TLDLLLSIPFFSDPGLKAL 276 (700)
T ss_pred HHHHHhcCCcccCc---chhhhhcccccCCchhhhh
Confidence 99999999999999 9999999999987654443
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.66 E-value=3.1e-07 Score=106.99 Aligned_cols=211 Identities=18% Similarity=0.226 Sum_probs=153.0
Q ss_pred ceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc----ceEEEEEEeccC-CCh
Q 001857 602 FGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR----ENLYLVMEYLNG-GDL 676 (1003)
Q Consensus 602 FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~----~~lyLVmEy~~G-GSL 676 (1003)
-.+.|+|....+|..|++|.+...+.... .....-+++++++.|+|||++.++|.+. ..++||++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 45789999999999999999843322111 1233457789999999999999999853 458999999986 688
Q ss_pred HHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcccccc
Q 001857 677 YSLLRNL---------------GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 677 ~d~L~~~---------------g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~~~ 741 (1003)
.++.-.. ...+|..+|.|+.||..||.++|+.|+.-+-|.|.+||++.+..|+|.--|..-+...
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 8765221 2368899999999999999999999999999999999999988888876665432110
Q ss_pred CCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHHHHhCCCC-C
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPP-F 820 (1003)
Q Consensus 742 ~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~P-F 820 (1003)
+. . |-+.+. .+-|.=.||.++..|.||.-= +
T Consensus 446 d~-------------------------------------------~--~~le~~---Qq~D~~~lG~ll~aLAt~~~ns~ 477 (655)
T KOG3741|consen 446 DP-------------------------------------------T--EPLESQ---QQNDLRDLGLLLLALATGTENSN 477 (655)
T ss_pred CC-------------------------------------------C--cchhHH---hhhhHHHHHHHHHHHhhcccccc
Confidence 00 0 112111 356888899999999998532 2
Q ss_pred CCCChhhH-HHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcC
Q 001857 821 NAEHPQQI-FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 821 ~~~~~~ei-~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqH 877 (1003)
.....+.. ... +...+|.+++++|.-+...++.++ ++.+++.|
T Consensus 478 ~~d~~~~s~~~~----------I~~~yS~D~rn~v~yl~s~~~~~k----sI~~llp~ 521 (655)
T KOG3741|consen 478 RTDSTQSSHLTR----------ITTTYSTDLRNVVEYLESLNFREK----SIQDLLPM 521 (655)
T ss_pred cccchHHHHHHH----------hhhhhhHHHHHHHHHHHhcCcccc----cHHHHHHH
Confidence 22222222 111 234578999999999999988863 67888877
No 451
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.61 E-value=5.3e-09 Score=123.54 Aligned_cols=256 Identities=23% Similarity=0.249 Sum_probs=176.8
Q ss_pred CCCCCCCCCCCcccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEE
Q 001857 575 RTSPIHPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVR 653 (1003)
Q Consensus 575 ~~s~~~Psk~~~~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPN-IVk 653 (1003)
..+.|.|.+.......|...+-+++|+++++++.+...+...+ .+++... ....-++++|.+++||| .+.
T Consensus 228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~ 298 (829)
T KOG0576|consen 228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVNNPNPVVR 298 (829)
T ss_pred hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHccCCCCccc
Confidence 4556666666666677888888999999999999876655544 5655432 33456788999999999 777
Q ss_pred EEeeeeccceEEEEEEeccCC-ChHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEe
Q 001857 654 FFYSFTCRENLYLVMEYLNGG-DLYSLL-RNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLT 731 (1003)
Q Consensus 654 L~~~f~d~~~lyLVmEy~~GG-SL~d~L-~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLi 731 (1003)
.++.++.+.+.+++|+++.++ +-...+ ...-.+.+-+...+.+.-+.+|+|+|+.-=+||| |||... +..++.
T Consensus 299 ~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~ 373 (829)
T KOG0576|consen 299 YLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLL 373 (829)
T ss_pred ccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccc
Confidence 778888888999999999887 222111 1111233344445566777899999998778999 777755 678999
Q ss_pred ecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHH
Q 001857 732 DFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILF 811 (1003)
Q Consensus 732 DFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILY 811 (1003)
||+..... + .....++..+|+.++|||+.....+....|.|++|+--.
T Consensus 374 ~~~v~~~L--------------------------~------~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~ 421 (829)
T KOG0576|consen 374 DFAVPPQL--------------------------T------RTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAI 421 (829)
T ss_pred cccCCccc--------------------------C------cccccccCCCCCCCCCchhhcccccccCCCccCCCcchh
Confidence 99876420 0 001356789999999999999999999999999999878
Q ss_pred HHHhCCCCCCCCChhhHHHhhhccCCCCCCCC--CCCCHHHH-HHHHhhccCCcCCcCCCCCHHHHHcCCCCCC
Q 001857 812 ELIVGIPPFNAEHPQQIFDNILNRKIPWPRVP--EEMSPEAH-DLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 812 ELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp--~~iS~elk-DLIrrcL~kDP~kRPg~~TAeELLqHPFFk~ 882 (1003)
+|.-|-+|-... ....-.+-.+. .-+.+. ...++... ++...|+..-|..|+ .+..++.|.+|.+
T Consensus 422 ~~ap~~pPr~~P--~~~~~~~g~~p-~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pk---v~mgacfsKvfng 489 (829)
T KOG0576|consen 422 QMAPGLPPRSSP--PAVLPMIGNGP-NSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPK---VHMGACFSKVFNG 489 (829)
T ss_pred hcCCCCCCCCCC--ccccCCCCCCC-CccccchhhhcCcccccCCcccccCCCCCCCc---chhhHHHHHHhcc
Confidence 888888876541 11111111111 011111 11122222 477889999999988 8888999988875
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.54 E-value=4e-07 Score=95.50 Aligned_cols=105 Identities=26% Similarity=0.295 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHhcCCC--cEEEEEeeeecc----ceEEEEEEeccC-CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Q 001857 634 ESILAERDILISVRNP--FVVRFFYSFTCR----ENLYLVMEYLNG-GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLH 706 (1003)
Q Consensus 634 e~~lrEi~IL~~L~HP--NIVkL~~~f~d~----~~lyLVmEy~~G-GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLH 706 (1003)
....+|...+..+..- .+++.+.+.... ...|||+|+++| .+|.+++......+......++.+++..+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 4567788877766432 233444444332 246899999998 489999987655778888899999999999999
Q ss_pred hcCceeccCCCcceeecCCC---cEEEeecCCccc
Q 001857 707 SLRVVHRDLKPDNLLIAHDG---HIKLTDFGLSKV 738 (1003)
Q Consensus 707 s~GIIHRDIKPeNILLd~dG---~VKLiDFGLAk~ 738 (1003)
..||+|+|+++.|||++.++ .+.|+||+-++.
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999999999887 899999998874
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.37 E-value=1.1e-06 Score=96.48 Aligned_cols=137 Identities=23% Similarity=0.242 Sum_probs=100.7
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc-----------------c--HHHHHHHHHHHHHHHhcCCC--
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI-----------------R--KNAVESILAERDILISVRNP-- 649 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~-----------------~--~~~ie~~lrEi~IL~~L~HP-- 649 (1003)
+.+...||.|--|.||.|.+. .|.++|||.=+..... . .-......+|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456678999999999999985 7899999974321100 0 01123567788899888654
Q ss_pred cEEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEE
Q 001857 650 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIK 729 (1003)
Q Consensus 650 NIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VK 729 (1003)
.|++.+++ +.-.+||||+.|-.|...- ++.+....++..|+.-+.-+-..||||+|+.+-|||++.+|.+.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~ 242 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV 242 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence 56665543 5568999999996665432 23445556666777777766699999999999999999999999
Q ss_pred EeecCCcc
Q 001857 730 LTDFGLSK 737 (1003)
Q Consensus 730 LiDFGLAk 737 (1003)
++||--+.
T Consensus 243 vIDwPQ~v 250 (304)
T COG0478 243 VIDWPQAV 250 (304)
T ss_pred EEeCcccc
Confidence 99998765
No 454
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.31 E-value=1.1e-05 Score=82.69 Aligned_cols=138 Identities=27% Similarity=0.377 Sum_probs=82.9
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--cEEEEEeeeec---cceEEEEE
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP--FVVRFFYSFTC---RENLYLVM 668 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HP--NIVkL~~~f~d---~~~lyLVm 668 (1003)
++.|+.|..+.||++.... ..+++|+.... .....+.+|..++..+... .+++++..... ....+++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 5789999999999999754 58999986543 3445677888888777432 35566653322 33579999
Q ss_pred EeccCCChHH----------------HHH---hc--C--CCCHHH------HHHH---------------HHHHHH-HHH
Q 001857 669 EYLNGGDLYS----------------LLR---NL--G--CLDEDV------ARVY---------------IAEVVL-ALE 703 (1003)
Q Consensus 669 Ey~~GGSL~d----------------~L~---~~--g--~L~Ee~------ar~I---------------a~QIL~-ALe 703 (1003)
++++|..+.. .+. .. . .+.... .... ...+.. .++
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999988877 111 11 0 011000 0000 111222 233
Q ss_pred HHh-------hcCceeccCCCcceeec-CCCcEEEeecCCccc
Q 001857 704 YLH-------SLRVVHRDLKPDNLLIA-HDGHIKLTDFGLSKV 738 (1003)
Q Consensus 704 YLH-------s~GIIHRDIKPeNILLd-~dG~VKLiDFGLAk~ 738 (1003)
.++ ...++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 333 24699999999999999 667778999998874
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.30 E-value=8.3e-06 Score=87.60 Aligned_cols=138 Identities=22% Similarity=0.324 Sum_probs=90.8
Q ss_pred CCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHH------HHHHHHHHhcCC---CcEEEEEeee-
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESI------LAERDILISVRN---PFVVRFFYSF- 658 (1003)
Q Consensus 589 ddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~------lrEi~IL~~L~H---PNIVkL~~~f- 658 (1003)
.+|.+++.+-......|.+-.- +|+.|.+|...............+ .+++..+..+.. -.+..++.+.
T Consensus 31 ~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 31 NNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred CCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 5699999999888888887764 578899998765332222222211 223333333322 1222222222
Q ss_pred ----eccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecC
Q 001857 659 ----TCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFG 734 (1003)
Q Consensus 659 ----~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFG 734 (1003)
.-....+|+|||++|..|.++.. +++ .+...|..++.-||+.|++|+|+.|.|++++.++ ++++||+
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~ 179 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQ 179 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECc
Confidence 22234568999999988876532 233 2445677889999999999999999999998655 9999998
Q ss_pred Ccc
Q 001857 735 LSK 737 (1003)
Q Consensus 735 LAk 737 (1003)
..+
T Consensus 180 ~k~ 182 (229)
T PF06176_consen 180 GKR 182 (229)
T ss_pred ccc
Confidence 765
No 456
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.24 E-value=6.9e-06 Score=94.14 Aligned_cols=230 Identities=17% Similarity=0.265 Sum_probs=146.7
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEE--------EEeeeeccceE
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILIS-VRNPFVVR--------FFYSFTCRENL 664 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~-L~HPNIVk--------L~~~f~d~~~l 664 (1003)
.+.||+|+-+.+|-.-.- + -.+-|++.+.-..... ..+..|.. -.||-+-. |++. .....+
T Consensus 16 gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Pppa~~a------qk~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~i 85 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPPAAQA------QKVAELAATPDAPLLNYRVAWPQATLHGG-RRGKVI 85 (637)
T ss_pred CccccCCccceeeecchh--h-chhheeecCCCchHHH------HHHHHhccCCCCcchhhhhcccHHHhhCC-Ccccee
Confidence 357999999999955322 1 2345887665322111 12223332 34553332 1111 112237
Q ss_pred EEEEEeccCCCh-HHHHH------hcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEEEeecCCcc
Q 001857 665 YLVMEYLNGGDL-YSLLR------NLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1003)
Q Consensus 665 yLVmEy~~GGSL-~d~L~------~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1003)
-+.|..++|..- ..++. .........+...++.|+.+.+.||..|.+-+|+.++|+|+++++.|.|.|=..-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 788888887532 22221 11346788888999999999999999999999999999999999999998754322
Q ss_pred ccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc-----cCCCCccceeechhHHHHH
Q 001857 738 VGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-----GTGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 738 ~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~kSDIWSLGVILYE 812 (1003)
+ + .........+|.+.|.+||.-. +..-+...|-|.||+++|+
T Consensus 166 i---~-----------------------------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~ 213 (637)
T COG4248 166 I---N-----------------------------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFH 213 (637)
T ss_pred e---c-----------------------------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHH
Confidence 1 0 0112234578999999999754 3445678999999999999
Q ss_pred HHhC-CCCCCCCC-------hhhHHHhhhccC-----------CCCCCC--CCCCCHHHHHHHHhhccCC--cCCcCC
Q 001857 813 LIVG-IPPFNAEH-------PQQIFDNILNRK-----------IPWPRV--PEEMSPEAHDLIDRFLTED--PHQRLG 867 (1003)
Q Consensus 813 LLTG-k~PF~~~~-------~~ei~qkIl~~~-----------~~~P~l--p~~iS~elkDLIrrcL~kD--P~kRPg 867 (1003)
+|.| +.||.+.. +-+. .|..+. .+-|.- ..-+++.++.|..+|++.- +.-||+
T Consensus 214 lL~ggrHPysGI~~~~~ap~p~E~--~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~ 289 (637)
T COG4248 214 LLFGGRHPYSGIPLISDAPNPLET--DIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPT 289 (637)
T ss_pred HHhcCCCCCCcccccCCCCCcchh--hhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCC
Confidence 9986 99997632 2111 222211 111111 1236788999999999843 457994
No 457
>PRK09902 hypothetical protein; Provisional
Probab=98.22 E-value=1.1e-05 Score=86.30 Aligned_cols=139 Identities=15% Similarity=0.223 Sum_probs=100.5
Q ss_pred eccCceEEEEEEECCCCCEEEEEEeecc---ccccHHHHHHHHHHHHHHHhcCCC--cEEEEEeeeec----cceEEEEE
Q 001857 598 SRGAFGRVFLAKKRTTGDLFAIKVLKKA---DMIRKNAVESILAERDILISVRNP--FVVRFFYSFTC----RENLYLVM 668 (1003)
Q Consensus 598 G~G~FGtVyLArdk~tgk~VALKVIkks---~i~~~~~ie~~lrEi~IL~~L~HP--NIVkL~~~f~d----~~~lyLVm 668 (1003)
|.||-|.|+..... |+.|=+|.-... ..........+.+|...|..+..- .+++....-.. ....+||+
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 66888889987653 446777765411 011122456788999999887532 24444422211 12478999
Q ss_pred EeccC-CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCc--EEEeecCCccc
Q 001857 669 EYLNG-GDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGH--IKLTDFGLSKV 738 (1003)
Q Consensus 669 Ey~~G-GSL~d~L~~~--g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~--VKLiDFGLAk~ 738 (1003)
|-+.| .+|.+++... .+.++.....++.+|+.+|.-||..|+.|+|+-+.|||++.+|. ++++||--++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98864 5898888663 35677777899999999999999999999999999999987777 99999987763
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.17 E-value=9.2e-06 Score=96.72 Aligned_cols=139 Identities=22% Similarity=0.269 Sum_probs=88.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeecccc---------------------------ccH----HHHH------HHH
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM---------------------------IRK----NAVE------SIL 637 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i---------------------------~~~----~~ie------~~l 637 (1003)
..|+.++-|.||.|+.+ +|+.||||+....-. .-. +..+ .+.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 67999999999999985 599999999865210 000 0111 223
Q ss_pred HHHHHHHhc-----CCCcEEEEEeeeeccceEEEEEEeccCCChHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHhhcCc
Q 001857 638 AERDILISV-----RNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLL--RNLGCLDEDVARVYIAEVVLALEYLHSLRV 710 (1003)
Q Consensus 638 rEi~IL~~L-----~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L--~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GI 710 (1003)
+|...+..+ +.|+|.--.-+++-...-.|+|||++|-.+.+.. +. ..++...+.....++ -+..+=..|+
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~--f~~q~~~dgf 286 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRA--FLRQLLRDGF 286 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHH--HHHHHHhcCc
Confidence 344444433 2344322222222234457999999999998874 44 445533322222221 1223334899
Q ss_pred eeccCCCcceeecCCCcEEEeecCCcc
Q 001857 711 VHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1003)
Q Consensus 711 IHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1003)
+|.|.+|.||+++.+|.+.+.|||+..
T Consensus 287 fHaDpHpGNi~v~~~g~i~~lDfGi~g 313 (517)
T COG0661 287 FHADPHPGNILVRSDGRIVLLDFGIVG 313 (517)
T ss_pred cccCCCccceEEecCCcEEEEcCccee
Confidence 999999999999999999999999865
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.12 E-value=2.5e-05 Score=83.60 Aligned_cols=134 Identities=16% Similarity=0.114 Sum_probs=83.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc--EEEEEeeeeccceEEEEEEecc
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF--VVRFFYSFTCRENLYLVMEYLN 672 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPN--IVkL~~~f~d~~~lyLVmEy~~ 672 (1003)
..||.|..+.||+. .+..+++|+..... ....+.+|.+++..+..-. +++.+.+..+.+..++|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 56899999999974 24467889875422 1234678999998875432 4667777777777899999999
Q ss_pred CCC-hH--------------HHH-------Hhc--CCCCHHH-HHHHHHH----------HHH-HHHHHh----hcCcee
Q 001857 673 GGD-LY--------------SLL-------RNL--GCLDEDV-ARVYIAE----------VVL-ALEYLH----SLRVVH 712 (1003)
Q Consensus 673 GGS-L~--------------d~L-------~~~--g~L~Ee~-ar~Ia~Q----------IL~-ALeYLH----s~GIIH 712 (1003)
|.+ +. ..+ +.. ...+... ...+..+ +.. ...+|. ...++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 964 11 111 110 0011000 0111001 111 122222 124789
Q ss_pred ccCCCcceeecCCCcEEEeecCCccc
Q 001857 713 RDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 713 RDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
+|+.|.||+++.++ +.|+||+.+..
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCc
Confidence 99999999999888 99999998874
No 460
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.03 E-value=4.3e-05 Score=83.35 Aligned_cols=138 Identities=24% Similarity=0.217 Sum_probs=93.3
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHH---------------------HHHHHHHHHHHHHhcC--CCc
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKN---------------------AVESILAERDILISVR--NPF 650 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~---------------------~ie~~lrEi~IL~~L~--HPN 650 (1003)
...|..|--+.||+|.. .++..+|+|+++.....-+. ...-..+|...|.++. +-.
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34788888999999986 56889999998753221111 1122345666666653 233
Q ss_pred EEEEEeeeeccceEEEEEEeccCC-ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-cCceeccCCCcceeecCCCcE
Q 001857 651 VVRFFYSFTCRENLYLVMEYLNGG-DLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS-LRVVHRDLKPDNLLIAHDGHI 728 (1003)
Q Consensus 651 IVkL~~~f~d~~~lyLVmEy~~GG-SL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs-~GIIHRDIKPeNILLd~dG~V 728 (1003)
+++-+.++ +-.|||||+... .-.-.|+.- .+....+..+..+++..+.-|-. .|+||+||..-|||+. ++.+
T Consensus 132 vP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 132 VPEPIAFR----NNVLVMEFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred CCCceeec----CCeEEEEeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeE
Confidence 34444332 236999999643 111112221 23333678888899999988876 9999999999999999 8899
Q ss_pred EEeecCCccc
Q 001857 729 KLTDFGLSKV 738 (1003)
Q Consensus 729 KLiDFGLAk~ 738 (1003)
.|+|||-|..
T Consensus 206 ~iID~~QaV~ 215 (268)
T COG1718 206 YIIDVSQAVT 215 (268)
T ss_pred EEEECccccc
Confidence 9999999873
No 461
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.97 E-value=8.9e-05 Score=78.89 Aligned_cols=128 Identities=23% Similarity=0.319 Sum_probs=91.7
Q ss_pred CCeEEEEEeeccCc-eEEEEEEECCCCCEEEEEEeecc----------cccc--------HHHHHHHHHHHHHHHhc---
Q 001857 589 DDFEIIKPISRGAF-GRVFLAKKRTTGDLFAIKVLKKA----------DMIR--------KNAVESILAERDILISV--- 646 (1003)
Q Consensus 589 ddYeIlk~LG~G~F-GtVyLArdk~tgk~VALKVIkks----------~i~~--------~~~ie~~lrEi~IL~~L--- 646 (1003)
.+++.++.||.|.- |.||+++. .|+.||||+++.- .... ......|..|-+...+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68999999999999 99999986 5789999993320 0000 02345677787776665
Q ss_pred CCCcE--EEEEeeeecc------------------ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Q 001857 647 RNPFV--VRFFYSFTCR------------------ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLH 706 (1003)
Q Consensus 647 ~HPNI--VkL~~~f~d~------------------~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLH 706 (1003)
.+.++ |+++++..-. ...-||.||++... .+. ..-+.+|..-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~----~~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQ----IRDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccc----hhHHHHHHHHHHHHH
Confidence 45556 8998887322 11357888886633 122 234567888899999
Q ss_pred hcCceeccCCCcceeecCCCcEEEeecCCc
Q 001857 707 SLRVVHRDLKPDNLLIAHDGHIKLTDFGLS 736 (1003)
Q Consensus 707 s~GIIHRDIKPeNILLd~dG~VKLiDFGLA 736 (1003)
+.||+-+|+|+.|.. + -||+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~---~--G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR---G--GKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc---C--CEEEecccC
Confidence 999999999999976 2 389999964
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.90 E-value=0.0001 Score=78.29 Aligned_cols=134 Identities=17% Similarity=0.124 Sum_probs=82.3
Q ss_pred eeccCc-eEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccceEEEEEEeccCC
Q 001857 597 ISRGAF-GRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFVVRFFYSFTCRENLYLVMEYLNGG 674 (1003)
Q Consensus 597 LG~G~F-GtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNIVkL~~~f~d~~~lyLVmEy~~GG 674 (1003)
|-.|.+ +.||++... +..+.+|+..... ...+.+|+.++..+. +--+++++.+....+..++|||+++|.
T Consensus 6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV 77 (244)
T ss_pred cCCCCCcCeEEEEcCC--CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence 444555 789998753 3678888865432 234567888887763 334667777777666789999999997
Q ss_pred ChHHHH----------------HhcCCCCH------HHHHHHHHH-----------------------HHHHHHHH----
Q 001857 675 DLYSLL----------------RNLGCLDE------DVARVYIAE-----------------------VVLALEYL---- 705 (1003)
Q Consensus 675 SL~d~L----------------~~~g~L~E------e~ar~Ia~Q-----------------------IL~ALeYL---- 705 (1003)
+|.... .+...++. ......+.+ +...+..|
T Consensus 78 ~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 157 (244)
T cd05150 78 PAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATR 157 (244)
T ss_pred cHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhC
Confidence 775331 11111110 000000000 11112222
Q ss_pred ---hhcCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 706 ---HSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 706 ---Hs~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
....++|+|+.|.|||++.++.+.|+||+.|..
T Consensus 158 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 158 PAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 123489999999999999988888999998864
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=97.85 E-value=0.00015 Score=91.06 Aligned_cols=145 Identities=19% Similarity=0.364 Sum_probs=90.8
Q ss_pred EEEEeeccCceEEEEEEECCCC--CEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcE--EEEEeeeecc---ceE
Q 001857 593 IIKPISRGAFGRVFLAKKRTTG--DLFAIKVLKKADMIRKNAVESILAERDILISVR-NPFV--VRFFYSFTCR---ENL 664 (1003)
Q Consensus 593 Ilk~LG~G~FGtVyLArdk~tg--k~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~-HPNI--VkL~~~f~d~---~~l 664 (1003)
.++.|+.|.+..+|+......+ ..+++|+........ ....+.+|..+|+.+. |++| ++++.++.+. +..
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA 119 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc--cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence 3677899999999998875432 467788654332111 1245778999999885 6654 7777776654 467
Q ss_pred EEEEEeccCCChHH--------------------HHHhcCC-------C---------CHHHHHHHHHH-----------
Q 001857 665 YLVMEYLNGGDLYS--------------------LLRNLGC-------L---------DEDVARVYIAE----------- 697 (1003)
Q Consensus 665 yLVmEy~~GGSL~d--------------------~L~~~g~-------L---------~Ee~ar~Ia~Q----------- 697 (1003)
|+||||++|..+.+ .+..... + ...++..+..+
T Consensus 120 flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~ 199 (822)
T PLN02876 120 FYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPP 199 (822)
T ss_pred eEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCC
Confidence 89999999864321 1111100 0 01222222111
Q ss_pred ----HHHHHHHHhh-----------cCceeccCCCcceeecCC-Cc-EEEeecCCcccc
Q 001857 698 ----VVLALEYLHS-----------LRVVHRDLKPDNLLIAHD-GH-IKLTDFGLSKVG 739 (1003)
Q Consensus 698 ----IL~ALeYLHs-----------~GIIHRDIKPeNILLd~d-G~-VKLiDFGLAk~~ 739 (1003)
+...+.+|.. ..+||+|++|.|||++.+ +. +-|.||+++..+
T Consensus 200 ~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 200 RNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred CChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 2233556632 359999999999999853 33 579999998864
No 464
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.80 E-value=6.2e-05 Score=94.86 Aligned_cols=202 Identities=24% Similarity=0.288 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEeeeeccce----EEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 001857 633 VESILAERDILISVRNPFVVRFFYSFTCREN----LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL 708 (1003)
Q Consensus 633 ie~~lrEi~IL~~L~HPNIVkL~~~f~d~~~----lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~ 708 (1003)
+....-|...+..+.|+|++.++.+.-.... +.+..|+|.+-++...+...+.++...++.+..+++.||.|+|+.
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 3444556777888899999999877655432 345678999999999999999999999999999999999999998
Q ss_pred CceeccCCCc---ceeecCCCcEEEe--ecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCC
Q 001857 709 RVVHRDLKPD---NLLIAHDGHIKLT--DFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGT 783 (1003)
Q Consensus 709 GIIHRDIKPe---NILLd~dG~VKLi--DFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGT 783 (1003)
...|.-+.-. +...+..+.+.++ ||+.++..... .......-+
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~--------------------------------~~~~~~~~~ 353 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDN--------------------------------EKSFSDLLA 353 (1351)
T ss_pred ccceeEEecccccccccCccceeecchhhhcccccCCCc--------------------------------ccchhhcCc
Confidence 5444443333 3333445556665 77766531100 011123345
Q ss_pred CCCCCchhhccCCCCcc--ceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCC
Q 001857 784 PDYLAPEILLGTGHGTT--ADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTED 861 (1003)
Q Consensus 784 p~YmAPEVL~g~~ys~k--SDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kD 861 (1003)
..|.|||......+..+ .|+|.+|.....+..|..+-.- ..+...+ ++........+++.+|+..+
T Consensus 354 ~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~---~~~~~~~---------l~~~~~~~~~d~~~~~~~~~ 421 (1351)
T KOG1035|consen 354 EIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEK---SAVPVSL---------LDVLSTSELLDALPKCLDED 421 (1351)
T ss_pred cccccccccccccchhhhhhHHHHHHHHHhhhhhcCccccc---ccchhhh---------hccccchhhhhhhhhhcchh
Confidence 56788888877666554 6999999999999887643211 0011111 11122226788999999999
Q ss_pred cCCcCCCCCHHHHHcCCCCC
Q 001857 862 PHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 862 P~kRPg~~TAeELLqHPFFk 881 (1003)
+++|+ ++.+++.|+|.+
T Consensus 422 ~~~Rl---~~~~ll~~~f~~ 438 (1351)
T KOG1035|consen 422 SEERL---SALELLTHPFLR 438 (1351)
T ss_pred hhhcc---chhhhhhchhcc
Confidence 99999 899999999976
No 465
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.78 E-value=0.00011 Score=87.66 Aligned_cols=138 Identities=24% Similarity=0.352 Sum_probs=86.3
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeeccccc----------------------------cHHHHHH------HHHHH
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI----------------------------RKNAVES------ILAER 640 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~----------------------------~~~~ie~------~lrEi 640 (1003)
+.||.-+.|.|++|+.+. |+.|||||-+..-.. -.+..+. |.+|.
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 579999999999999865 999999997642100 0011112 22233
Q ss_pred HHH----HhcCCCc------EEEEEeeeeccceEEEEEEeccCCChHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHhhc
Q 001857 641 DIL----ISVRNPF------VVRFFYSFTCRENLYLVMEYLNGGDLYSL--LRNLGCLDEDVARVYIAEVVLALEYLHSL 708 (1003)
Q Consensus 641 ~IL----~~L~HPN------IVkL~~~f~d~~~lyLVmEy~~GGSL~d~--L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~ 708 (1003)
+.. +.+.|-+ |+++|..+.. .-.|+||||+|..+.+. |.+.+ ++...+...+.++.. +-|=..
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st--~RVLtME~~~G~~i~Dl~~i~~~g-i~~~~i~~~l~~~~~--~qIf~~ 320 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLST--KRVLTMEYVDGIKINDLDAIDKRG-ISPHDILNKLVEAYL--EQIFKT 320 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCc--ceEEEEEecCCccCCCHHHHHHcC-CCHHHHHHHHHHHHH--HHHHhc
Confidence 222 2223433 5555544332 35799999999877654 44433 444433333222221 223357
Q ss_pred CceeccCCCcceeecC----CCcEEEeecCCccc
Q 001857 709 RVVHRDLKPDNLLIAH----DGHIKLTDFGLSKV 738 (1003)
Q Consensus 709 GIIHRDIKPeNILLd~----dG~VKLiDFGLAk~ 738 (1003)
|++|.|-+|.||++.. ++.+.+-|||+...
T Consensus 321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred CCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 8999999999999984 56899999999874
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.65 E-value=0.00024 Score=75.59 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=45.5
Q ss_pred EEEeeccCce-EEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC---cEEEEEeeeecc---ceEEE
Q 001857 594 IKPISRGAFG-RVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP---FVVRFFYSFTCR---ENLYL 666 (1003)
Q Consensus 594 lk~LG~G~FG-tVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HP---NIVkL~~~f~d~---~~lyL 666 (1003)
+..|+.|+.. .||+.. ..+.+|+..... ....+.+|..+|..+... -+.+++...... ...|+
T Consensus 2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~-----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~ 71 (235)
T cd05155 2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAAG-----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS 71 (235)
T ss_pred ceeccCCCcccceEEcC-----CceEEEcCCccc-----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence 3567777776 588762 347778754321 234678899998877531 344445443332 23588
Q ss_pred EEEeccCCCh
Q 001857 667 VMEYLNGGDL 676 (1003)
Q Consensus 667 VmEy~~GGSL 676 (1003)
+|++++|.++
T Consensus 72 l~~~i~G~~l 81 (235)
T cd05155 72 VYRWLEGETA 81 (235)
T ss_pred EEEeecCCCC
Confidence 9999999776
No 467
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.46 E-value=0.00048 Score=72.16 Aligned_cols=130 Identities=23% Similarity=0.330 Sum_probs=91.2
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEE-EEeeeeccceEEEEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVR-FFYSFTCRENLYLVME 669 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVk-L~~~f~d~~~lyLVmE 669 (1003)
.++.+.||+|.+|.||++.+. |..+|+|+-.... ....+..|.++|..+...++.. +|.+.. .++.||
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me 92 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRME 92 (201)
T ss_pred hhhhhhhhcccccEEEEeecc--CceEEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhh
Confidence 455678999999999999984 5689999865432 3456778999999888766543 443332 245599
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCC-CcceeecCCCcEEEeecCCccc
Q 001857 670 YLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLK-PDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 670 y~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIK-PeNILLd~dG~VKLiDFGLAk~ 738 (1003)
|+.|-.|...-... + +.-+..++.+---|-..||-|..|. |..++|..++.+.|+||-.|++
T Consensus 93 ~i~G~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 93 YIDGRPLGKLEIGG---D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhcCcchhhhhhcc---c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 99998887665421 2 2233445555455677899999886 5555555556999999998874
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.45 E-value=0.002 Score=68.37 Aligned_cols=131 Identities=22% Similarity=0.257 Sum_probs=91.5
Q ss_pred EEeeccCceEEEEEEECCCCCEEEEEEeecccc-------------ccHHHHHHHHHHHHHHHhcC------CCcEEEEE
Q 001857 595 KPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-------------IRKNAVESILAERDILISVR------NPFVVRFF 655 (1003)
Q Consensus 595 k~LG~G~FGtVyLArdk~tgk~VALKVIkks~i-------------~~~~~ie~~lrEi~IL~~L~------HPNIVkL~ 655 (1003)
..||.|+.=.||.- . ......||++..... ..........+|+.-...+. +.+|.++|
T Consensus 7 ~~i~~G~~R~cy~H--P-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--P-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC--C-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 46899999999954 2 334467899876540 00112355566666655554 78999999
Q ss_pred eeeeccceEEEEEEeccC------CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCC--C-
Q 001857 656 YSFTCRENLYLVMEYLNG------GDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHD--G- 726 (1003)
Q Consensus 656 ~~f~d~~~lyLVmEy~~G------GSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~d--G- 726 (1003)
++.+++..+-+|+|.+.. -+|.+++.. +.+++ . +...+-.-.+||-..+|+.+||+|.||++... +
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~ 158 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-E---LRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGE 158 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-H---HHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCc
Confidence 999999999999998742 467888855 44655 2 23334455567889999999999999999753 2
Q ss_pred -cEEEeec
Q 001857 727 -HIKLTDF 733 (1003)
Q Consensus 727 -~VKLiDF 733 (1003)
.+.|+|-
T Consensus 159 ~~lvlIDG 166 (199)
T PF10707_consen 159 FRLVLIDG 166 (199)
T ss_pred eEEEEEeC
Confidence 4777774
No 469
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.43 E-value=9.5e-06 Score=103.34 Aligned_cols=256 Identities=19% Similarity=0.117 Sum_probs=160.7
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCC-CEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTG-DLFAIKVLKKADMI--RKNAVESILAERDILISVRNPFVVRFFYSFTCR-- 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tg-k~VALKVIkks~i~--~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~-- 661 (1003)
.+..|++.--+|-|.++ ++++.... ..+-+|+.+..+.. .+-..+....|++-++...|+++...+.-....
T Consensus 1227 ~~e~~EV~l~i~~~~~~---R~k~Lr~kid~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s 1303 (2724)
T KOG1826|consen 1227 AMEHSEVNLGISNHFHF---RNKWLRSKIDWFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSES 1303 (2724)
T ss_pred Hhhhhheeeecccceee---ccchHhhhhceeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCC
Confidence 34556666556555444 33332211 12455555432211 122234556677777777899888776554432
Q ss_pred ceEEEEEEeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhc-----CceeccCCCcceeecCCCcEEEee
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNL----GCLDEDVARVYIAEVVLALEYLHSL-----RVVHRDLKPDNLLIAHDGHIKLTD 732 (1003)
Q Consensus 662 ~~lyLVmEy~~GGSL~d~L~~~----g~L~Ee~ar~Ia~QIL~ALeYLHs~-----GIIHRDIKPeNILLd~dG~VKLiD 732 (1003)
...|.+++|+.+|.++..|-+. ..+.+..+.....+.+.+..-+|+. -.+|+++|+-|.+|..+..+|+.+
T Consensus 1304 ~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk 1383 (2724)
T KOG1826|consen 1304 TEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGK 1383 (2724)
T ss_pred hHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccc
Confidence 3578999999999999998653 3444444444444557888887754 279999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhccCCCCccceeechhHHHHH
Q 001857 733 FGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFE 812 (1003)
Q Consensus 733 FGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYE 812 (1003)
+|+.++. ++. .......++++.|++|++...-.++.++|+|.+|+-+|+
T Consensus 1384 ~gLdKIk--np~-----------------------------~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1384 GGLDKIK--NPV-----------------------------LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred ccccccc--Cch-----------------------------HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9998831 000 112335688999999999988888888999999999999
Q ss_pred HHhCCCCCCCCChhhHHHhhhccCCCCCCCCCCCCHHHHHHHHhhccCCcCCcCCCCCHHHHHcCCCCC
Q 001857 813 LIVGIPPFNAEHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFK 881 (1003)
Q Consensus 813 LLTGk~PF~~~~~~ei~qkIl~~~~~~P~lp~~iS~elkDLIrrcL~kDP~kRPg~~TAeELLqHPFFk 881 (1003)
...|..+|..-....+. .+..... +-.++.-.|.++......+|-+.-..|| .-...+.-+.|.
T Consensus 1433 rs~~n~~fi~flq~~Lk-giidn~t-f~sIe~l~pgdaNve~~~~Ll~K~~~rp---~q~isls~d~~a 1496 (2724)
T KOG1826|consen 1433 RSDGNAYFIFFLQPALK-GIIDNHT-FFSIEKLKPGDANVEALHRLLWKYMERP---GQYISLSRDHFA 1496 (2724)
T ss_pred HhcccHHHHHHHHHHHc-Ccccccc-cccccccCCCcccHHHHHHHHHHhhhcc---hhhhhccccccc
Confidence 99998888432222221 1111111 1122222334444444444444556788 556666666554
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.27 E-value=0.0019 Score=68.11 Aligned_cols=137 Identities=17% Similarity=0.226 Sum_probs=80.3
Q ss_pred EEEeeccCceEEEEEEECC-CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-CcEEEEEeeeeccceEEEEEEec
Q 001857 594 IKPISRGAFGRVFLAKKRT-TGDLFAIKVLKKADMIRKNAVESILAERDILISVRN-PFVVRFFYSFTCRENLYLVMEYL 671 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~-tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H-PNIVkL~~~f~d~~~lyLVmEy~ 671 (1003)
++.|..|-...||++.... .++.|.+|+...... ..-...+|..++..+.. ...++++..+.. .++|||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~----~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE----LIIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc----ceecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEEee
Confidence 4678888889999997543 357889998754211 11122367778777743 234455544331 3799999
Q ss_pred cCCChHH--------------HHHhc---C-CC----------C-HHHHHHHHHH----------------------HH-
Q 001857 672 NGGDLYS--------------LLRNL---G-CL----------D-EDVARVYIAE----------------------VV- 699 (1003)
Q Consensus 672 ~GGSL~d--------------~L~~~---g-~L----------~-Ee~ar~Ia~Q----------------------IL- 699 (1003)
+|.++.. .+.+. . .. . .+.+..+... +.
T Consensus 75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 154 (235)
T cd05157 75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRD 154 (235)
T ss_pred CCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHH
Confidence 9976521 11111 1 11 0 1122222111 11
Q ss_pred --HHHH-HHh----hcCceeccCCCcceeecC-CCcEEEeecCCccc
Q 001857 700 --LALE-YLH----SLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKV 738 (1003)
Q Consensus 700 --~ALe-YLH----s~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~ 738 (1003)
..|. .+- ..+++|+|+.|.|||++. ++.+.|+||..|..
T Consensus 155 ~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 155 EISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 1111 111 246999999999999998 57899999998873
No 471
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.18 E-value=0.0067 Score=70.76 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=54.4
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeecccc-c-c--HHHHHHHHHHHHHHHhcC---CCcEEEEEeeeeccceEEE
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-I-R--KNAVESILAERDILISVR---NPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i-~-~--~~~ie~~lrEi~IL~~L~---HPNIVkL~~~f~d~~~lyL 666 (1003)
.+.||.|.+..||++.....++.+.||.-..... . . ....++...|.+.|..+. ..++++++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 4679999999999999864435899997431100 0 0 123456677888887752 3467778766 4456789
Q ss_pred EEEeccCCC
Q 001857 667 VMEYLNGGD 675 (1003)
Q Consensus 667 VmEy~~GGS 675 (1003)
|||++++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999998744
No 472
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.16 E-value=0.0013 Score=68.97 Aligned_cols=97 Identities=23% Similarity=0.250 Sum_probs=78.0
Q ss_pred HHHHHHHHhcCC-CcEEEEEeeeeccceEEEEEEeccCCChHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHhh---cC
Q 001857 637 LAERDILISVRN-PFVVRFFYSFTCRENLYLVMEYLNGGDLYSL---LRNLGCLDEDVARVYIAEVVLALEYLHS---LR 709 (1003)
Q Consensus 637 lrEi~IL~~L~H-PNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~---L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs---~G 709 (1003)
.+|.-+|+.+.+ ++++++++++.. ++|.||...+++... +...-..++.....++.+++..+++|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 357778888876 699999999853 678999987766532 2222345788888999999999999997 45
Q ss_pred ceeccCCCcceeecCCCcEEEeecCCcc
Q 001857 710 VVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1003)
Q Consensus 710 IIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1003)
+.-.|++|+|+-++++|++|++|.....
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~ 110 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVF 110 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcc
Confidence 7889999999999999999999998765
No 473
>PRK10593 hypothetical protein; Provisional
Probab=97.15 E-value=0.0046 Score=68.89 Aligned_cols=77 Identities=13% Similarity=0.044 Sum_probs=54.3
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC---CcEEEEEeeeec---cceEEE
Q 001857 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRN---PFVVRFFYSFTC---RENLYL 666 (1003)
Q Consensus 593 Ilk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~H---PNIVkL~~~f~d---~~~lyL 666 (1003)
-.+.||.|..+.||..... ++ .+.+|+.+.. .....+.+|...|+.+.- -.++++++.+.+ .+..+|
T Consensus 18 ~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~-----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 18 RVECISEQPYAALWALYDS-QG-NPMPLMARSF-----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred eeeecCCccceeEEEEEcC-CC-CEEEEEeccc-----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence 3567999999999998652 33 4667774321 012467789998888743 357778876654 356899
Q ss_pred EEEeccCCCh
Q 001857 667 VMEYLNGGDL 676 (1003)
Q Consensus 667 VmEy~~GGSL 676 (1003)
|||+++|+++
T Consensus 91 VmE~i~G~~~ 100 (297)
T PRK10593 91 LLERLRGVSV 100 (297)
T ss_pred EEeccCCEec
Confidence 9999998765
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.06 E-value=0.0015 Score=70.36 Aligned_cols=132 Identities=20% Similarity=0.238 Sum_probs=75.5
Q ss_pred eeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEEEEeeeeccceEEEEEEeccCCC
Q 001857 597 ISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRENLYLVMEYLNGGD 675 (1003)
Q Consensus 597 LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPN-IVkL~~~f~d~~~lyLVmEy~~GGS 675 (1003)
+..|-.+.+|+.. .++..|++|+....... -. -...+|..+++.+.... .++++.... -++||||++|..
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~--~~-~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~ 74 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKA--LG-VDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEV 74 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCccccc--cc-CcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcc
Confidence 4567778899886 35667888975432110 00 12356788887775332 234444332 268999999866
Q ss_pred hHH--------------HHHhc---C----CCC-HHHHHHHHHHH---------HHHHHHHhh--------cCceeccCC
Q 001857 676 LYS--------------LLRNL---G----CLD-EDVARVYIAEV---------VLALEYLHS--------LRVVHRDLK 716 (1003)
Q Consensus 676 L~d--------------~L~~~---g----~L~-Ee~ar~Ia~QI---------L~ALeYLHs--------~GIIHRDIK 716 (1003)
+.. .+.+. . +++ ...+..+..++ ...+..+-. ..++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 531 11111 1 111 11222222222 111222211 258999999
Q ss_pred CcceeecCCCcEEEeecCCccc
Q 001857 717 PDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 717 PeNILLd~dG~VKLiDFGLAk~ 738 (1003)
|.|||++.++ +.|+||..|..
T Consensus 155 ~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 155 AYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCcEEEeCCC-CEEEeccccCc
Confidence 9999999877 78999998874
No 475
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.02 E-value=0.0061 Score=67.56 Aligned_cols=141 Identities=21% Similarity=0.239 Sum_probs=82.0
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--cEEEEEeee------eccc
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP--FVVRFFYSF------TCRE 662 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HP--NIVkL~~~f------~d~~ 662 (1003)
...++.++.|....||++.. .+| .|.+|+..... . .+.+..|..++..|... .+++++... ...+
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~--~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g 96 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV--K---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAG 96 (307)
T ss_pred ceeccccCCccccceEEEEe-CCC-cEEEEEecCCC--C---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCC
Confidence 44567778888889999874 334 57789875421 1 12344566666665321 134443211 1245
Q ss_pred eEEEEEEeccCCChH-----------HHH---Hhc-CCCC--------HHH-----HH----------HHHHHHHHHHHH
Q 001857 663 NLYLVMEYLNGGDLY-----------SLL---RNL-GCLD--------EDV-----AR----------VYIAEVVLALEY 704 (1003)
Q Consensus 663 ~lyLVmEy~~GGSL~-----------d~L---~~~-g~L~--------Ee~-----ar----------~Ia~QIL~ALeY 704 (1003)
..+++|+|++|..+. ..+ +.. ..++ ... .. .....+...+++
T Consensus 97 ~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 176 (307)
T TIGR00938 97 KPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDY 176 (307)
T ss_pred eEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHH
Confidence 678999999985431 111 110 1110 000 00 001123345555
Q ss_pred Hh-------hcCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 705 LH-------SLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 705 LH-------s~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
+. ..+++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 177 l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 177 LDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 54 26899999999999999988778999998863
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.95 E-value=0.004 Score=68.41 Aligned_cols=76 Identities=12% Similarity=0.101 Sum_probs=47.2
Q ss_pred EEEeeccCceEEEEEEECC------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEEEEeeeeccceEEE
Q 001857 594 IKPISRGAFGRVFLAKKRT------TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRENLYL 666 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~------tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPN-IVkL~~~f~d~~~lyL 666 (1003)
++.|..|-...||++.... .++.|++|+..... .......+|..++..+.... .+++++.+.. .+
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~----~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV----ELLIDRERELVVFARLSERNLGPKLYGIFPN----GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC----cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cc
Confidence 4556667777899887543 25789999976532 11234456777777764322 3455555542 35
Q ss_pred EEEeccCCChH
Q 001857 667 VMEYLNGGDLY 677 (1003)
Q Consensus 667 VmEy~~GGSL~ 677 (1003)
|+||++|..+.
T Consensus 75 v~e~i~G~~l~ 85 (302)
T cd05156 75 IEEFIPSRTLT 85 (302)
T ss_pred hhheeCCCcCC
Confidence 89999887663
No 477
>PRK05231 homoserine kinase; Provisional
Probab=96.91 E-value=0.016 Score=64.15 Aligned_cols=31 Identities=32% Similarity=0.358 Sum_probs=26.8
Q ss_pred cCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
.|+||+|+.|.|||++.+...-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 4899999999999998665568999998863
No 478
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.85 E-value=0.01 Score=64.82 Aligned_cols=138 Identities=19% Similarity=0.161 Sum_probs=82.6
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--cEEEEEee------eeccceE
Q 001857 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP--FVVRFFYS------FTCRENL 664 (1003)
Q Consensus 593 Ilk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HP--NIVkL~~~------f~d~~~l 664 (1003)
-++.|..|....+|++.. .+..+++|+.... ....+..|..++..+.+. .+++++.. ....+..
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~------~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEKV------SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCCC------ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence 356778888889999865 3346889987641 123455677777666432 24444431 1234567
Q ss_pred EEEEEeccCCChHH-----------HH---Hhc-CCCCH--------HHHH------------HHHHHHHHHHHHHhh--
Q 001857 665 YLVMEYLNGGDLYS-----------LL---RNL-GCLDE--------DVAR------------VYIAEVVLALEYLHS-- 707 (1003)
Q Consensus 665 yLVmEy~~GGSL~d-----------~L---~~~-g~L~E--------e~ar------------~Ia~QIL~ALeYLHs-- 707 (1003)
++|+++++|..+.. .+ +.. ..+.. .... .....+..++.++.+
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 89999999876421 11 110 00100 0000 011123334445443
Q ss_pred -----cCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 708 -----LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 708 -----~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
.+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 4799999999999999987788999998863
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.46 E-value=0.0022 Score=72.65 Aligned_cols=136 Identities=15% Similarity=0.207 Sum_probs=94.1
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccc------cHH-----------HH--HHHHHHHHHHHhcC-CCc
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI------RKN-----------AV--ESILAERDILISVR-NPF 650 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~------~~~-----------~i--e~~lrEi~IL~~L~-HPN 650 (1003)
+.+...||-|.-+-||.+-+ ..|.++++|+-...+.. .+. .+ -...+|...|+.|. |-+
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 66788999999999999987 46888999964322110 000 01 13456777777774 222
Q ss_pred -EEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceeccCCCcceeecCCCcEE
Q 001857 651 -VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIK 729 (1003)
Q Consensus 651 -IVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHRDIKPeNILLd~dG~VK 729 (1003)
|++.+ +.+..|+|||++.|..|.+.-+-. .+..+...++.-+--|..+|+||+|..-=||++++++.++
T Consensus 173 pVPkpi----D~~RH~Vvmelv~g~Pl~~v~~v~------d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~ 242 (465)
T KOG2268|consen 173 PVPKPI----DHNRHCVVMELVDGYPLRQVRHVE------DPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIV 242 (465)
T ss_pred CCCCcc----cccceeeHHHhhcccceeeeeecC------ChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEE
Confidence 33333 335678999999998877554221 1223445566666778899999999999999999999999
Q ss_pred EeecCCcc
Q 001857 730 LTDFGLSK 737 (1003)
Q Consensus 730 LiDFGLAk 737 (1003)
++||--..
T Consensus 243 vIDFPQmv 250 (465)
T KOG2268|consen 243 VIDFPQMV 250 (465)
T ss_pred EeechHhh
Confidence 99997654
No 480
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.18 E-value=0.029 Score=64.81 Aligned_cols=141 Identities=28% Similarity=0.272 Sum_probs=92.0
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccH---------------------HHH--HHHHHHHHHHHhcCCC
Q 001857 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRK---------------------NAV--ESILAERDILISVRNP 649 (1003)
Q Consensus 593 Ilk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~---------------------~~i--e~~lrEi~IL~~L~HP 649 (1003)
+-..|..|--+-||.|.. .+|..+|||+++.+-+.-+ ..+ --...|.+-|.+++..
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 345678899999999986 5788899999875322111 011 1223466667777654
Q ss_pred cEEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-hhcCceeccCCCcceeecCCCcE
Q 001857 650 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYL-HSLRVVHRDLKPDNLLIAHDGHI 728 (1003)
Q Consensus 650 NIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYL-Hs~GIIHRDIKPeNILLd~dG~V 728 (1003)
.|+..--.. - ..-.|||+|+.+.....=.-+.-.++...++.+-.|++.-+.-| |.++.||.||.--|+|+ .+|.+
T Consensus 227 GIP~PePIl-L-k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~l 303 (520)
T KOG2270|consen 227 GIPCPEPIL-L-KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGKL 303 (520)
T ss_pred CCCCCCcee-e-ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCEE
Confidence 432110000 0 12369999995422221122234577777888878888777766 57899999999999998 55899
Q ss_pred EEeecCCcc
Q 001857 729 KLTDFGLSK 737 (1003)
Q Consensus 729 KLiDFGLAk 737 (1003)
.|+|-+-+.
T Consensus 304 yiIDVSQSV 312 (520)
T KOG2270|consen 304 YIIDVSQSV 312 (520)
T ss_pred EEEEccccc
Confidence 999999876
No 481
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.98 E-value=0.1 Score=57.31 Aligned_cols=30 Identities=20% Similarity=0.418 Sum_probs=26.5
Q ss_pred cCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
.+++|+|+.+.|||++. +.+.|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 57999999999999987 6789999998763
No 482
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.98 E-value=0.057 Score=61.45 Aligned_cols=145 Identities=21% Similarity=0.290 Sum_probs=79.3
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--cEEEEEeeeeccc--eEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNP--FVVRFFYSFTCRE--NLYL 666 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HP--NIVkL~~~f~d~~--~lyL 666 (1003)
..++..+-.|---.+|.... +++.++|. .. .............+|..+|+.+.-- -+...++.+.+.. ..|.
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~--~~~~~vlR-~P-~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~ 102 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGD--TGQKYVLR-KP-PRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFY 102 (321)
T ss_pred CceeeeccCCcccceEEEec--CCceEEEe-cC-CccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceE
Confidence 34444443333334444443 26777777 22 1122233445667788888776431 2334455555544 6799
Q ss_pred EEEeccCCChHH------------------HHHhc-----------C---CCCHHHHHHHHHH--------------HHH
Q 001857 667 VMEYLNGGDLYS------------------LLRNL-----------G---CLDEDVARVYIAE--------------VVL 700 (1003)
Q Consensus 667 VmEy~~GGSL~d------------------~L~~~-----------g---~L~Ee~ar~Ia~Q--------------IL~ 700 (1003)
||+|+.|..+.. +|... + .+...++..+..+ +..
T Consensus 103 v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~ 182 (321)
T COG3173 103 VMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADR 182 (321)
T ss_pred EEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHH
Confidence 999999843221 11110 0 0011111111111 112
Q ss_pred HHHHHhh--------cCceeccCCCcceeecCCCcEEEeecCCcccc
Q 001857 701 ALEYLHS--------LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVG 739 (1003)
Q Consensus 701 ALeYLHs--------~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~~ 739 (1003)
-..+|+. -.++|+|+.+.||+++..+-+=+.||+++.++
T Consensus 183 ~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 183 LIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred HHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 2334432 35899999999999999988999999999863
No 483
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.93 E-value=0.04 Score=63.70 Aligned_cols=76 Identities=21% Similarity=0.144 Sum_probs=48.1
Q ss_pred EeeccCceEEEEEEECCCCCEEEEEEeecccc----ccHHHHHHHHHHHHHHHhcC--CC-cEEEEEeeeeccceEEEEE
Q 001857 596 PISRGAFGRVFLAKKRTTGDLFAIKVLKKADM----IRKNAVESILAERDILISVR--NP-FVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 596 ~LG~G~FGtVyLArdk~tgk~VALKVIkks~i----~~~~~ie~~lrEi~IL~~L~--HP-NIVkL~~~f~d~~~lyLVm 668 (1003)
.||-|....||++.....++.++||--..--. .-.-..++..-|...|+... -| +++++|. .+.+...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence 47999999999999854446789986431100 01223355667777776653 24 5666653 3445567999
Q ss_pred EeccC
Q 001857 669 EYLNG 673 (1003)
Q Consensus 669 Ey~~G 673 (1003)
|+++.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 99954
No 484
>PLN02236 choline kinase
Probab=95.76 E-value=0.058 Score=61.49 Aligned_cols=138 Identities=20% Similarity=0.239 Sum_probs=78.9
Q ss_pred EEEEeeccCceEEEEEEECC----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEEEEeeeeccceEEEE
Q 001857 593 IIKPISRGAFGRVFLAKKRT----TGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPF-VVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 593 Ilk~LG~G~FGtVyLArdk~----tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPN-IVkL~~~f~d~~~lyLV 667 (1003)
-++.|-.|-...+|++.... .++.|.+|+..... ...+. ..+|..++..+..-+ -.++++.+... .|
T Consensus 40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v 111 (344)
T PLN02236 40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RV 111 (344)
T ss_pred EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---Ceeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eE
Confidence 34455557888999987532 34689999876532 11112 256777777764332 23455555332 58
Q ss_pred EEeccCCChHHH--------------HHh---cC------CCCHHHHHHHHHHH-----------------HHHHHHH--
Q 001857 668 MEYLNGGDLYSL--------------LRN---LG------CLDEDVARVYIAEV-----------------VLALEYL-- 705 (1003)
Q Consensus 668 mEy~~GGSL~d~--------------L~~---~g------~L~Ee~ar~Ia~QI-----------------L~ALeYL-- 705 (1003)
++|++|.+|... +.+ .. ......+..++.++ ...+..|
T Consensus 112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 191 (344)
T PLN02236 112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK 191 (344)
T ss_pred EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence 999988776311 111 11 01112222332221 1111111
Q ss_pred ------hhcCceeccCCCcceeecC-CCcEEEeecCCccc
Q 001857 706 ------HSLRVVHRDLKPDNLLIAH-DGHIKLTDFGLSKV 738 (1003)
Q Consensus 706 ------Hs~GIIHRDIKPeNILLd~-dG~VKLiDFGLAk~ 738 (1003)
+...++|+|+++.|||+++ ++.+.|+||..|..
T Consensus 192 ~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 192 ELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1236899999999999986 47899999998873
No 485
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=95.68 E-value=0.075 Score=58.88 Aligned_cols=30 Identities=40% Similarity=0.633 Sum_probs=25.8
Q ss_pred CceeccCCCcceeecCCCc-EEEeecCCccc
Q 001857 709 RVVHRDLKPDNLLIAHDGH-IKLTDFGLSKV 738 (1003)
Q Consensus 709 GIIHRDIKPeNILLd~dG~-VKLiDFGLAk~ 738 (1003)
.++|+|++|.|||++.++. .-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4899999999999997555 46999999875
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.11 E-value=0.19 Score=59.12 Aligned_cols=77 Identities=19% Similarity=0.142 Sum_probs=50.5
Q ss_pred EEEEeeccCceEEEEEEECCCCCEEEEEEeecccc-ccH---HHHHHHHHHHHHHHhcC---CCcEEEEEeeeeccceEE
Q 001857 593 IIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM-IRK---NAVESILAERDILISVR---NPFVVRFFYSFTCRENLY 665 (1003)
Q Consensus 593 Ilk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i-~~~---~~ie~~lrEi~IL~~L~---HPNIVkL~~~f~d~~~ly 665 (1003)
..+.||-|....||+..+. +..|.||.-..... ... ....+...|...|..+. ..+++++|.+.. +..+
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 4678999999999999873 45688886541111 000 12344555666666553 247888887766 4467
Q ss_pred EEEEeccC
Q 001857 666 LVMEYLNG 673 (1003)
Q Consensus 666 LVmEy~~G 673 (1003)
++||++++
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 88999977
No 487
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=94.93 E-value=0.11 Score=58.73 Aligned_cols=139 Identities=17% Similarity=0.197 Sum_probs=76.7
Q ss_pred CeEEEEEeeccCceEEEEEEECCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE-EEEEeeeeccceEE
Q 001857 590 DFEIIKPISRGAFGRVFLAKKRTT---GDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFV-VRFFYSFTCRENLY 665 (1003)
Q Consensus 590 dYeIlk~LG~G~FGtVyLArdk~t---gk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNI-VkL~~~f~d~~~ly 665 (1003)
+.++ +.|..|=...+|++..... +..|.+|+...... ..-.-.+|..+++.+..-++ +++++.+.. +
T Consensus 16 ~i~i-~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~----~~IdR~~E~~il~~l~~~gl~P~~l~~~~~-G--- 86 (330)
T PLN02421 16 DFSV-ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD----YVIDRERELQAIKYLSAAGFGAKLLGVFGN-G--- 86 (330)
T ss_pred ceEE-EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC----eEechHHHHHHHHHHHhcCCCCceeEEeCC-c---
Confidence 3444 4444477778998875432 34788998754211 11122457777777754333 345555532 2
Q ss_pred EEEEeccCCChHH--------------HHHhc---C-C----C-CHHHHHHHHHHH----------------------HH
Q 001857 666 LVMEYLNGGDLYS--------------LLRNL---G-C----L-DEDVARVYIAEV----------------------VL 700 (1003)
Q Consensus 666 LVmEy~~GGSL~d--------------~L~~~---g-~----L-~Ee~ar~Ia~QI----------------------L~ 700 (1003)
+|.+|++|.+|.. .+++. . + . ....+..|..++ ..
T Consensus 87 ~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 166 (330)
T PLN02421 87 MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRD 166 (330)
T ss_pred EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHH
Confidence 5889988766521 11111 1 0 1 112222232221 11
Q ss_pred HHH----HHhhc----CceeccCCCcceeecC-CCcEEEeecCCcc
Q 001857 701 ALE----YLHSL----RVVHRDLKPDNLLIAH-DGHIKLTDFGLSK 737 (1003)
Q Consensus 701 ALe----YLHs~----GIIHRDIKPeNILLd~-dG~VKLiDFGLAk 737 (1003)
-+. ++... -++|.|+.+.|||+++ ++.++++||..|-
T Consensus 167 ~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 167 EIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred HHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 111 12122 2799999999999975 5789999999886
No 488
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=94.18 E-value=0.068 Score=63.93 Aligned_cols=162 Identities=22% Similarity=0.317 Sum_probs=103.6
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeeeecc-ceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCceec
Q 001857 635 SILAERDILISVRNPFVVRFFYSFTCR-ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHR 713 (1003)
Q Consensus 635 ~~lrEi~IL~~L~HPNIVkL~~~f~d~-~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~GIIHR 713 (1003)
.++--..+++.+.|+|....+++-... ....+|||++ +-+|.+.+.... +-... +. .+|+.|-
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~-l~~~s-------~~-------~~~~~~~ 91 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN-LKDES-------LL-------AHGVLHL 91 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc-cchhh-------hc-------cccccee
Confidence 455567788999999999988877653 4588999999 559999887643 21111 11 2233222
Q ss_pred cCCCcceeecCCCcEEEeecCCccccccCCCCCCCCCCccCcccCCCCCccchhhhhhhhhhccccccCCCCCCCchhhc
Q 001857 714 DLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL 793 (1003)
Q Consensus 714 DIKPeNILLd~dG~VKLiDFGLAk~~~~~~~ddls~p~~s~ttl~g~~~~~lt~~~~~~~~~~~~s~vGTp~YmAPEVL~ 793 (1003)
|| ++++| -++.. ..+..|
T Consensus 92 -----~~-------~~~td-~~~t~--------------------------------------~~~~~~----------- 109 (725)
T KOG1093|consen 92 -----NI-------IYITD-HFLTK--------------------------------------YPSPIG----------- 109 (725)
T ss_pred -----hh-------hhccc-ccccc--------------------------------------CCCCCC-----------
Confidence 11 22333 11100 001111
Q ss_pred cCCCCccceeechhHHHHHHHhCCCCCCCCChhhHHHhhhccCCCCCC----------CCCCCCHHHHHHHHhhccCCcC
Q 001857 794 GTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPR----------VPEEMSPEAHDLIDRFLTEDPH 863 (1003)
Q Consensus 794 g~~ys~kSDIWSLGVILYELLTGk~PF~~~~~~ei~qkIl~~~~~~P~----------lp~~iS~elkDLIrrcL~kDP~ 863 (1003)
+++|||++|.++.++.-|...|......+....+.+-... +. +.-.++....+++.+|+...|.
T Consensus 110 -----pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~-d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ 183 (725)
T KOG1093|consen 110 -----PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTD-DQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPI 183 (725)
T ss_pred -----cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccC-chhHHHHHHHHHHHHhhhHhHHHHhccCCccccc
Confidence 4999999999999999998877655554444444332110 00 1123567788899999999999
Q ss_pred CcCCCCCHHHHHcCCCCCCC
Q 001857 864 QRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 864 kRPg~~TAeELLqHPFFk~I 883 (1003)
.|| ...++.+|+-|.++
T Consensus 184 ir~---l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 184 IRP---LPMELSKRCSFTEV 200 (725)
T ss_pred ccc---chhHHhcCccHHHH
Confidence 999 88999999988765
No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=94.17 E-value=0.25 Score=58.01 Aligned_cols=78 Identities=23% Similarity=0.194 Sum_probs=51.2
Q ss_pred EEEeeccCceEEEEEEECCCCCEEEEEEeeccccc---cHHHHHHHHHHHHHHHhcC--CC-cEEEEEeeeeccceEEEE
Q 001857 594 IKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMI---RKNAVESILAERDILISVR--NP-FVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 594 lk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~---~~~~ie~~lrEi~IL~~L~--HP-NIVkL~~~f~d~~~lyLV 667 (1003)
++.||-|.-..||++.+...++.++||--..--.. -.-..++..-|...|+... -| +++++|. .+.....+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhHH
Confidence 67899999999999998444567888853211001 1223466677888887653 24 5666764 345566789
Q ss_pred EEeccC
Q 001857 668 MEYLNG 673 (1003)
Q Consensus 668 mEy~~G 673 (1003)
||+++.
T Consensus 112 MEdL~~ 117 (409)
T PRK12396 112 MEDLSD 117 (409)
T ss_pred HHhCcc
Confidence 998854
No 490
>PTZ00384 choline kinase; Provisional
Probab=93.90 E-value=0.36 Score=56.29 Aligned_cols=29 Identities=28% Similarity=0.323 Sum_probs=24.7
Q ss_pred cCceeccCCCcceeecCCCcEEEeecCCcc
Q 001857 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1003)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1003)
..++|.|+-+.|||.+. +.+.++||-.|.
T Consensus 227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~ 255 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAG 255 (383)
T ss_pred eeeeeccCCcccEEecC-CCEEEEEecccc
Confidence 46899999999999754 469999998876
No 491
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=93.79 E-value=0.58 Score=52.19 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=28.0
Q ss_pred CceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 709 RVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 709 GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
+++|+|+.+.|||++.++.+.++||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998874
No 492
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=93.11 E-value=1 Score=50.56 Aligned_cols=76 Identities=20% Similarity=0.315 Sum_probs=47.2
Q ss_pred eEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeeeccceEEEE
Q 001857 591 FEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV---RNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 591 YeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L---~HPNIVkL~~~f~d~~~lyLV 667 (1003)
.+-.+.|+-|....+|+.. .+++.|-||+-... ....+..|..-|+.| .--.+++.+.+....+.-|||
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLl 90 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSES------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLL 90 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGG------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEE
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecChh------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEE
Confidence 3446778999999999987 67788999986532 224566777777776 334678888888877778999
Q ss_pred EEeccCC
Q 001857 668 MEYLNGG 674 (1003)
Q Consensus 668 mEy~~GG 674 (1003)
|||++.+
T Consensus 91 le~l~~~ 97 (288)
T PF03881_consen 91 LEFLEMG 97 (288)
T ss_dssp EE-----
T ss_pred EEeecCC
Confidence 9999866
No 493
>PRK06148 hypothetical protein; Provisional
Probab=92.98 E-value=1.6 Score=56.99 Aligned_cols=30 Identities=37% Similarity=0.591 Sum_probs=26.2
Q ss_pred cCceeccCCCcceeecCCC--cEE-EeecCCcc
Q 001857 708 LRVVHRDLKPDNLLIAHDG--HIK-LTDFGLSK 737 (1003)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG--~VK-LiDFGLAk 737 (1003)
.++||.|+.+.|||++.++ .+. |+|||-+.
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 5799999999999999875 565 99999876
No 494
>PRK11768 serine/threonine protein kinase; Provisional
Probab=92.71 E-value=1.6 Score=49.49 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=24.7
Q ss_pred cCceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 708 LRVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 708 ~GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
.++||+|+.+.|||++ + .+.|+||+.+..
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 4789999999999995 3 578999998873
No 495
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=91.92 E-value=0.3 Score=56.75 Aligned_cols=72 Identities=26% Similarity=0.429 Sum_probs=53.9
Q ss_pred cceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc-CceeccCCCcceeecCCCcEEEeecCCccc
Q 001857 661 RENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSL-RVVHRDLKPDNLLIAHDGHIKLTDFGLSKV 738 (1003)
Q Consensus 661 ~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs~-GIIHRDIKPeNILLd~dG~VKLiDFGLAk~ 738 (1003)
..+.|++|++- |+.|. .+ ..-..+++..++.+.+..|.-+..+ .+=|||+...||||+ +|+|.|+||-+|+.
T Consensus 298 ~~y~yl~~kdh-gt~is-~i---k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 298 TLYLYLHFKDH-GTPIS-II---KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred ceEEEEEEecC-Cceee-ee---ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 44678888875 44443 22 2234566677778877777777654 689999999999999 99999999999984
No 496
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=90.57 E-value=1.5 Score=48.24 Aligned_cols=29 Identities=34% Similarity=0.635 Sum_probs=25.4
Q ss_pred ceeccCCCcceeecCC--C---cEEEeecCCccc
Q 001857 710 VVHRDLKPDNLLIAHD--G---HIKLTDFGLSKV 738 (1003)
Q Consensus 710 IIHRDIKPeNILLd~d--G---~VKLiDFGLAk~ 738 (1003)
++|+|++..|||+..+ | .++++||-+++.
T Consensus 217 l~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~ 250 (294)
T PF02958_consen 217 LCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY 250 (294)
T ss_pred EEcCccCHHhEeEccccccccccceeeccccccC
Confidence 8999999999999764 3 699999999875
No 497
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=89.93 E-value=1.3 Score=48.81 Aligned_cols=85 Identities=18% Similarity=0.205 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEeeeeccceEEEEEEeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh--cCce
Q 001857 634 ESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHS--LRVV 711 (1003)
Q Consensus 634 e~~lrEi~IL~~L~HPNIVkL~~~f~d~~~lyLVmEy~~GGSL~d~L~~~g~L~Ee~ar~Ia~QIL~ALeYLHs--~GII 711 (1003)
.-+.++.+++++++ .|+++..- +.-.+-+++|+|..... ...-++.+ =+.+|.-.|+ .+.+
T Consensus 103 ~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------------~~~N~i~a-gi~~L~~fH~~~~~~l 165 (308)
T PF07387_consen 103 ALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------------NFSNFITA-GIKDLMDFHSENQHCL 165 (308)
T ss_pred hhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc------------chhHHHHH-hHHHHHHhhccCCCee
Confidence 34577888888874 58888732 33356799999953111 11111221 1456777884 4799
Q ss_pred eccCCCcceeecCCCcEEEeecCC
Q 001857 712 HRDLKPDNLLIAHDGHIKLTDFGL 735 (1003)
Q Consensus 712 HRDIKPeNILLd~dG~VKLiDFGL 735 (1003)
|+|-.|+||+-|..|.+||.|-+.
T Consensus 166 HGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 166 HGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred cCCCChhheeecCCCCEEecChhh
Confidence 999999999999999999999875
No 498
>smart00133 S_TK_X Extension to Ser/Thr-type protein kinases.
Probab=88.74 E-value=0.54 Score=40.06 Aligned_cols=31 Identities=39% Similarity=0.755 Sum_probs=25.6
Q ss_pred CCCChhHHhhh--cCCccCCCCCCCCCCCcccc
Q 001857 881 KDINWDTLARQ--KAAFVPTSESALDTSYFTSR 911 (1003)
Q Consensus 881 k~Idwd~L~~~--k~pfvP~~~s~lDts~F~s~ 911 (1003)
++++|+.+..+ .+||+|...+..|+++|+..
T Consensus 1 ~~idW~~l~~r~~~pP~~P~~~~~~d~s~fd~~ 33 (64)
T smart00133 1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDDE 33 (64)
T ss_pred CCCCHHHHHhCCCCCCcccccCCccHHhHcCCc
Confidence 46899999765 58999999888899888654
No 499
>PTZ00296 choline kinase; Provisional
Probab=87.82 E-value=4.6 Score=48.18 Aligned_cols=28 Identities=29% Similarity=0.526 Sum_probs=24.2
Q ss_pred CceeccCCCcceeecCCCcEEEeecCCcc
Q 001857 709 RVVHRDLKPDNLLIAHDGHIKLTDFGLSK 737 (1003)
Q Consensus 709 GIIHRDIKPeNILLd~dG~VKLiDFGLAk 737 (1003)
.++|.|+-+.|||.+.++ ++|+||-.|.
T Consensus 285 VfCHNDl~~~NiL~~~~~-l~LIDfEYAg 312 (442)
T PTZ00296 285 VFCHNDLQENNIINTNKC-LRLIDFEYSG 312 (442)
T ss_pred eEEeCCCCccceeecCCC-EEEEeecccc
Confidence 589999999999886544 9999999876
No 500
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=85.33 E-value=0.19 Score=60.07 Aligned_cols=73 Identities=27% Similarity=0.483 Sum_probs=60.4
Q ss_pred ccCCeEEEEEeeccCceEEEEEEECCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCR 661 (1003)
Q Consensus 587 ~lddYeIlk~LG~G~FGtVyLArdk~tgk~VALKVIkks~i~~~~~ie~~lrEi~IL~~L~HPNIVkL~~~f~d~ 661 (1003)
..++|+....+|.|+||+|+-+..+.++..||||.|.... ........++|..-+..+.|+++++++..|...
T Consensus 47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn--~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~ 119 (516)
T KOG1033|consen 47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKN--REESRSRVLREVSSLAEFEHPGIKRYFHAWYER 119 (516)
T ss_pred hhccccccccccccCccccCCccccccchhhHHHHhcccc--hhhhhhhhhccccchhhhcccchhhheeceecC
Confidence 3578999999999999999999998888899999886543 233445678888889999999999999887654
Done!