Query 001857
Match_columns 1003
No_of_seqs 475 out of 3290
Neff 4.9
Searched_HMMs 29240
Date Tue Mar 26 16:11:06 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001857.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1154-1158//hhsearch_pdb/001857hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v5w_A G-protein coupled recep 1.0 1 1 518.1 25.5 290 585-910 185-485 (689)
2 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 508.6 24.3 280 585-896 28-310 (311)
3 2acx_A G protein-coupled recep 1.0 1 1 494.4 6.1 512 424-993 9-560 (576)
4 3ubd_A Ribosomal protein S6 ki 1.0 1 1 490.8 21.3 276 587-897 22-304 (304)
5 4b9d_A Serine/threonine-protei 1.0 1 1 477.9 23.9 260 587-883 22-283 (350)
6 4fie_A Serine/threonine-protei 1.0 1 1 474.9 26.1 258 588-883 150-407 (423)
7 4fih_A Serine/threonine-protei 1.0 1 1 473.6 24.7 257 589-883 74-330 (346)
8 3pfq_A PKC-B, PKC-beta, protei 1.0 1 1 469.3 24.4 295 584-913 336-635 (674)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 463.8 23.3 256 585-877 54-310 (336)
10 3hyh_A Carbon catabolite-derep 1.0 1 1 463.3 23.2 259 585-882 9-268 (275)
No 1
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=518.10 Aligned_cols=290 Identities=34% Similarity=0.644 Sum_probs=251.8
Q ss_pred CCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHH---HHHHHCCCCCEEEEEEEEECC
Q ss_conf 85568908998750069669999999899978999994041000178999999999---999855999677898565316
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAER---DILISVRNPFVVRFFYSFTCR 661 (1003)
Q Consensus 585 ~~~ledYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei---~IL~~LkHPnIVkLl~~f~d~ 661 (1003)
...+++|+++++||+|+||+||+|+++.+|+.||||++.+..+........+.+|. .++..++|||||+++++|++.
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~ 264 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP 264 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred CCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 99568928888983164839999999999989999997578825255689999999999999648999871799999989
Q ss_pred CEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf 33899997626888499998329999999999999999999997626804034788625635799399951687533445
Q 001857 662 ENLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLI 741 (1003)
Q Consensus 662 ~~lyLVmEyl~GGSL~dlLkk~g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAkv~~~ 741 (1003)
+++|||||||+||+|.+++.+.+.+++..+++|++||+.||+|||++|||||||||+|||++.+|++||+|||+|+...
T Consensus 265 ~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~- 343 (689)
T 3v5w_A 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS- 343 (689)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECS-
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECC-
T ss_conf 9889999468998299999866999999999999999999999997885416886687598089988964565566637-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHC-CCCCCCCCEEECHHHHHHHHHHCCCCC
Q ss_conf 7888999997667544799974100335666431025656888878810012-599996320522268999998299999
Q 001857 742 NSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILL-GTGHGTTADWWSVGIILFELIVGIPPF 820 (1003)
Q Consensus 742 ~s~ddls~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~-g~~ys~kSDIWSLGVILYELLTGk~PF 820 (1003)
.....+.|||+.|||||++. +..|+.++|||||||++|||++|.+||
T Consensus 344 --------------------------------~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF 391 (689)
T 3v5w_A 344 --------------------------------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391 (689)
T ss_dssp --------------------------------SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred --------------------------------CCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf --------------------------------898777657867318899847999995999999999999998687999
Q ss_pred CCC---CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--CCHHHHHCCCCCCCCCHHHHHHH--CC
Q ss_conf 999---935677756304789999999899789999975265993786999--99889870978889993378620--28
Q 001857 821 NAE---HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KA 893 (1003)
Q Consensus 821 ~~~---s~~ei~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~--~TAeEILqHPFFk~Idw~~L~~~--~~ 893 (1003)
.+. +...++..+...... +|..+|+++++||.+||++||.+|+++ .++.++++||||+++||+.+..+ .|
T Consensus 392 ~~~~~~~~~~i~~~i~~~~~~---~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~p 468 (689)
T 3v5w_A 392 RQHKTKDKHEIDRMTLTMAVE---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468 (689)
T ss_dssp CGGGCCCHHHHHHHHHHCCCC---CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCC
T ss_pred CCCCHHHHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCC
T ss_conf 999867799999850579888---87669999999999976089868799988899999669150478988997089995
Q ss_pred CCCCCCCCCCCCCCCCC
Q ss_conf 85577899878887556
Q 001857 894 AFVPTSESALDTSYFTS 910 (1003)
Q Consensus 894 pfvP~~~s~lD~s~Fss 910 (1003)
||+|......+.++|+.
T Consensus 469 P~~P~~~~~~~~~~fD~ 485 (689)
T 3v5w_A 469 PLIPPRGEVNAADAFDI 485 (689)
T ss_dssp SCCCCTTCSSTTBCCC-
T ss_pred CCCCCCCCCCCCCCCCC
T ss_conf 93699999886877777
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=508.60 Aligned_cols=280 Identities=37% Similarity=0.730 Sum_probs=251.1
Q ss_pred CCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEE
Q ss_conf 85568908998750069669999999899978999994041000178999999999999855999677898565316338
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~ledYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL~~LkHPnIVkLl~~f~d~~~l 664 (1003)
....++|++++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.+|+.++|||||+++++|++++++
T Consensus 28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 107 (311)
T 4aw0_A 28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107 (311)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
T ss_conf 88852368988983164849999999999989999998888877978999999999999867998989199999738989
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99997626888499998329999999999999999999997626804034788625635799399951687533445788
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEyl~GGSL~dlLkk~g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAkv~~~~s~ 744 (1003)
|||||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++|||||||||+|||++.++++||+|||+|+......
T Consensus 108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~- 186 (311)
T 4aw0_A 108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES- 186 (311)
T ss_dssp EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT-
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCC-
T ss_conf 9999648998999999874999999999999999999999998878268787899698589888998768750257787-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCC
Q ss_conf 89999976675447999741003356664310256568888788100125999963205222689999982999999999
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~s 824 (1003)
......+.|||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+
T Consensus 187 ----------------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 238 (311)
T 4aw0_A 187 ----------------------------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238 (311)
T ss_dssp ----------------------------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ----------------------------CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf ----------------------------7654367556803079989768999968989989999999974989989979
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC---CHHHHHCCCCCCCCCHHHHHHHCCCCC
Q ss_conf 356777563047899999998997899999752659937869999---988987097888999337862028855
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG---GASEVKQHVFFKDINWDTLARQKAAFV 896 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~~---TAeEILqHPFFk~Idw~~L~~~~~pfv 896 (1003)
..+++.+|.+..+.+ |..+|+++++||.+||++||.+|+++. ....+++||||++++|+.+.++.||.+
T Consensus 239 ~~~~~~~i~~~~~~~---p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l 310 (311)
T 4aw0_A 239 EGLIFAKIIKLEYDF---PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310 (311)
T ss_dssp HHHHHHHHHHTCCCC---CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred HHHHHHHHHCCCCCC---CCCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHCCCCCCCC
T ss_conf 999999997199999---965699999999997628975780967975877987798758989899407999899
No 3
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=1.00 E-value=1 Score=494.42 Aligned_cols=512 Identities=26% Similarity=0.391 Sum_probs=352.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 87531243477888898668999999899877876224789871-15878778995313368877532178989999994
Q 001857 424 PSMACKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLA-GKGALSEHDDFPQMNELADIARCVATTPLDDDSSI 502 (1003)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 502 (1003)
.++.||.|.| |..+.++.+.++|++|..|+.++++.|.. +.-.++.--+--++--+++...|.+. | +-...
T Consensus 9 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~ig~~l~~~~~~~~-~--~~~~~ 80 (576)
T 2acx_A 9 NTVLLKAREG-----GGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERNPIGRLLFREFCATR-P--ELSRC 80 (576)
T ss_dssp -----CC------------CCCCCTTHHHHTCCCCSGGGHHHHHHSCCCHHHHHTTSHHHHHHHHHHHTTS-H--HHHHH
T ss_pred HHHHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCC-C--CHHHH
T ss_conf 1899998745-----89986400146442368979138999986366588886402833099999998458-3--12689
Q ss_pred CHHHHHHCCCEEEEECCCCCCCH-HHH-HHH---------HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHH
Q ss_conf 21221001004788247765402-675-799---------9999999989986432048987654201068999813332
Q 001857 503 PYLLSFLEDLRVVIDRRKFDALT-VET-FGA---------RIEKLIREKYLQLCELVTDDKVDITSTVIEEDAPLEDDVV 571 (1003)
Q Consensus 503 ~~~l~~~~~~r~~~d~rk~~sit-~e~-~g~---------ri~~l~R~k~~~l~e~v~~d~~d~~s~~iee~~~lEee~i 571 (1003)
..++.-+++..++.+.++..... ... +.. .-..++..-...+......+.+......... .+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~--~l~~~~~ 158 (576)
T 2acx_A 81 VAFLDGVAEYEVTPDDKRKACGRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHE--YLSVAPF 158 (576)
T ss_dssp HHHHHHHHHHHTSCTTTHHHHHHHHHHHHSCSSSCCSSTTCCHHHHHHHHHHHHHCCCTTTTHHHHHHHHH--HHTTHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--HHCCCCC
T ss_conf 99999998601266065999999999986194221124547989999999887427668999999998987--6024750
Q ss_pred CCCCCCCC--------CCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 02478998--------8998985568908998750069669999999899978999994041000178999999999999
Q 001857 572 RSLRTSPI--------HPSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDIL 643 (1003)
Q Consensus 572 ~sl~~s~~--------~p~k~~~~ledYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL 643 (1003)
..+..+.+ .........++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+|
T Consensus 159 ~~~~~s~~~~~~~~~~~l~~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL 238 (576)
T 2acx_A 159 ADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238 (576)
T ss_dssp HHHHTSHHHHHHHHHHHHHTSCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_conf 43221156656665545530676615418999982279879999999899978999998867643248999999999999
Q ss_pred HHCCCCCEEEEEEEEECCCEEEEEEEECCCCCHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEE
Q ss_conf 85599967789856531633899997626888499998329--9999999999999999999976268040347886256
Q 001857 644 ISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG--CLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLL 721 (1003)
Q Consensus 644 ~~LkHPnIVkLl~~f~d~~~lyLVmEyl~GGSL~dlLkk~g--~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNIL 721 (1003)
..++||||+++++++.+.+.+|+||||++||+|.+++...+ .+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 239 ~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNIL 318 (576)
T 2acx_A 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318 (576)
T ss_dssp HHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred HHCCCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHEEE
T ss_conf 87589877268778852998999997489990999998647889999999999999999999999789860578634189
Q ss_pred ECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCC
Q ss_conf 35799399951687533445788899999766754479997410033566643102565688887881001259999632
Q 001857 722 IAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTA 801 (1003)
Q Consensus 722 Id~~G~IKLsDFGLAkv~~~~s~ddls~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kS 801 (1003)
++.+|++||+|||+++.... .......+||+.|+|||++.+..|+.++
T Consensus 319 ld~~g~vKL~DFGla~~~~~--------------------------------~~~~~~~~GT~~Y~APEvl~~~~~~~~~ 366 (576)
T 2acx_A 319 LDDHGHIRISDLGLAVHVPE--------------------------------GQTIKGRVGTVGYMAPEVVKNERYTFSP 366 (576)
T ss_dssp ECTTSCEEECCCTTCEECCT--------------------------------TCCEECCCSCGGGCCHHHHTTCEESSHH
T ss_pred EECCCCEEEEECCCCEECCC--------------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCCC
T ss_conf 94788848976553234156--------------------------------7655566788562699998089999632
Q ss_pred EEECHHHHHHHHHHCCCCCCCCC----HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC--CHHHHH
Q ss_conf 05222689999982999999999----356777563047899999998997899999752659937869999--988987
Q 001857 802 DWWSVGIILFELIVGIPPFNAEH----PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSG--GASEVK 875 (1003)
Q Consensus 802 DIWSLGVILYELLTGk~PF~~~s----~~ei~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~~--TAeEIL 875 (1003)
|||||||++|||++|.+||.+.. ...+...+..... .++..+++++.+||.+||++||.+||++. ++.+++
T Consensus 367 DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~---~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil 443 (576)
T 2acx_A 367 DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE---EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVK 443 (576)
T ss_dssp HHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC---CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHH
T ss_conf 3999999999998589997666520127889987640344---6775479899999998453998783788888999997
Q ss_pred CCCCCCCCCHHHHHHH--CCCCCCCCCC-----CCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 0978889993378620--2885577899-----878887556545--6898899888999899865456789997786-5
Q 001857 876 QHVFFKDINWDTLARQ--KAAFVPTSES-----ALDTSYFTSRYS--WNTTDENIYPASDFEDSSDADSLSGSSSCLS-N 945 (1003)
Q Consensus 876 qHPFFk~Idw~~L~~~--~~pfvP~~~s-----~lD~s~Fss~~s--~~~td~n~~~~s~~~~~~~~~~~sgs~s~~s-~ 945 (1003)
+||||++++|+.+... .+||+|.... ..|..+|..... ...++..++..+ +.++++ +
T Consensus 444 ~HpfF~~i~w~~l~~~~~~pp~~p~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~f~~f-------------~~~~~~~~ 510 (576)
T 2acx_A 444 EHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKF-------------ATGSVPIP 510 (576)
T ss_dssp TSGGGTTCCHHHHHTTCSCCSCCCCCCCCCC-----------------CHHHHHHHHHH-------------CCEECHHH
T ss_pred HCHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHH-------------CCCCCCCC
T ss_conf 29353168988895188899998983224567730176624467887883077787521-------------35877764
Q ss_pred CHHHHHC-CCCC-CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 1122210-1589-7423579865401105533584433220020013788
Q 001857 946 RQEEVGD-ECGG-LAEFESGSSVNYSFSNFSFKNLSQLASINYDLLSKGW 993 (1003)
Q Consensus 946 ~~~e~~~-~~~~-l~~~~~~~~v~~~f~~f~~~~~~~~~~~~~~~~~~~~ 993 (1003)
||++|.+ +++. ++++...++..-.+.--.-...+-..+.++++++++-
T Consensus 511 ~~~e~~~~~~~~~l~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 560 (576)
T 2acx_A 511 WQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQD 560 (576)
T ss_dssp HHHHHHHTTHHHHHHCBSSSCC----------------------------
T ss_pred CCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
T ss_conf 00333310025553045778989976443567898888650566541578
No 4
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=490.79 Aligned_cols=276 Identities=42% Similarity=0.812 Sum_probs=246.3
Q ss_pred CCCCEEEEEEEECCCCEEEEEEEEC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCE
Q ss_conf 5689089987500696699999998---9997899999404100017899999999999985599967789856531633
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKR---TTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCREN 663 (1003)
Q Consensus 587 ~ledYeIlk~LGkGsFGtVylA~dk---~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL~~LkHPnIVkLl~~f~d~~~ 663 (1003)
..++|++++.||+|+||+||+|++. .+++.||+|++++....... ...+.+|+.+|+.++|||||+++++|.+.+.
T Consensus 22 ~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~ 100 (304)
T 3ubd_A 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEVNHPFIVKLHYAFQTEGK 100 (304)
T ss_dssp CGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE-CC------CCCCCCCCTTEECEEEEEEETTE
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHH-HHHHHHHHHHHHHCCCCCCCEEEEEEEECCE
T ss_conf 955658988972188839999998558878979999998157768478-9999999999987799799909999998999
Q ss_pred EEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCC
Q ss_conf 89999762688849999832999999999999999999999762680403478862563579939995168753344578
Q 001857 664 LYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 664 lyLVmEyl~GGSL~dlLkk~g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAkv~~~~s 743 (1003)
+|||||||+||+|.+++.+.+.+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|||+|+....
T Consensus 101 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~-- 178 (304)
T 3ubd_A 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-- 178 (304)
T ss_dssp EEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCC--
T ss_conf 999997579988899997559999999999999999999999977995888878995786899887623663433268--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCC
Q ss_conf 88999997667544799974100335666431025656888878810012599996320522268999998299999999
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
......+.+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.
T Consensus 179 -----------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 179 -----------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp -------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -----------------------------CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf -----------------------------876304544181507999965688787776361199999998598998984
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--CCHHHHHCCCCCCCCCHHHHHHH--CCCCCC
Q ss_conf 935677756304789999999899789999975265993786999--99889870978889993378620--288557
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVP 897 (1003)
Q Consensus 824 s~~ei~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~--~TAeEILqHPFFk~Idw~~L~~~--~~pfvP 897 (1003)
+..+++.+|.+...++ |..+|+++++||.+||++||.+||++ .+++|+++||||+++||+.+.++ .|||+|
T Consensus 230 ~~~~~~~~i~~~~~~~---p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P 304 (304)
T 3ubd_A 230 DRKETMTMILKAKLGM---PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304 (304)
T ss_dssp SHHHHHHHHHHCCCCC---CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred CHHHHHHHHHCCCCCC---CCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 9999999997189999---87689999999999864698787999867899997690403789999984899949679
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=477.91 Aligned_cols=260 Identities=27% Similarity=0.519 Sum_probs=235.6
Q ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
Q ss_conf 56890899875006966999999989997899999404100017899999999999985599967789856531633899
Q 001857 587 SIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYL 666 (1003)
Q Consensus 587 ~ledYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL~~LkHPnIVkLl~~f~d~~~lyL 666 (1003)
.+++|++++.||+|+||+||+|+++.+++.||+|++.+.... ....+.+.+|+.+|+.++|||||+++++|.+.+.+||
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 512558847970277939999998899989999998658789-7999999999999987799898919999998999999
Q ss_pred EEEECCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99762688849999832--9999999999999999999997626804034788625635799399951687533445788
Q 001857 667 VMEYLNGGDLYSLLRNL--GCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 667 VmEyl~GGSL~dlLkk~--g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAkv~~~~s~ 744 (1003)
|||||+||+|.+++... ..+++..++.|+.||+.||.|||++|||||||||+|||++.+|++||+|||+|+...
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~---- 176 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN---- 176 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCC----
T ss_pred EEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEEC----
T ss_conf 9948899839999997389999789999999999999999998991513597899798789998976465214406----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCC
Q ss_conf 89999976675447999741003356664310256568888788100125999963205222689999982999999999
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEH 824 (1003)
Q Consensus 745 ddls~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~s 824 (1003)
.......+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+
T Consensus 177 ---------------------------~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 177 ---------------------------STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp ---------------------------HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ---------------------------CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf ---------------------------88541014578836039999879998959999999999999997879989969
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 35677756304789999999899789999975265993786999998898709788899
Q 001857 825 PQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 825 ~~ei~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~~TAeEILqHPFFk~I 883 (1003)
..+++.+|..... +..+..+|+++++||.+||++||.+|| ++.++|+||||+..
T Consensus 230 ~~~~~~~i~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~---s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 230 MKNLVLKIISGSF--PPVSLHYSYDLRSLVSQLFKRNPRDRP---SVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHHHTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSC---CHHHHHTSHHHHTT
T ss_pred HHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHCCHHHHCC
T ss_conf 9999999980899--999755799999999998558966790---89999639976167
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=474.91 Aligned_cols=258 Identities=31% Similarity=0.540 Sum_probs=232.6
Q ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEE
Q ss_conf 68908998750069669999999899978999994041000178999999999999855999677898565316338999
Q 001857 588 IDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLV 667 (1003)
Q Consensus 588 ledYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL~~LkHPnIVkLl~~f~d~~~lyLV 667 (1003)
.+.|+++++||+|+||.||+|+++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||+++++|.+.+.+|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHH---HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 68438616962481848999999999989999998625546---899999999999857998987168999989999999
Q ss_pred EEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 97626888499998329999999999999999999997626804034788625635799399951687533445788899
Q 001857 668 MEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDL 747 (1003)
Q Consensus 668 mEyl~GGSL~dlLkk~g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAkv~~~~s~ddl 747 (1003)
||||+||+|.+++.. +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|||+|+.....
T Consensus 227 mEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~----- 300 (423)
T 4fie_A 227 MEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----- 300 (423)
T ss_dssp EECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS-----
T ss_pred EECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCC-----
T ss_conf 969899828988761-69899999999999999999999889044657877789858999898037265477788-----
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 99976675447999741003356664310256568888788100125999963205222689999982999999999356
Q 001857 748 SGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQ 827 (1003)
Q Consensus 748 s~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~s~~e 827 (1003)
.....+.+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+..+
T Consensus 301 --------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~ 354 (423)
T 4fie_A 301 --------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 354 (423)
T ss_dssp --------------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred --------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf --------------------------764346664747279999779999968999999999999997879989869999
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 77756304789999999899789999975265993786999998898709788899
Q 001857 828 IFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 828 i~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~~TAeEILqHPFFk~I 883 (1003)
++..|.....+....+..+|+++++||.+||++||.+|+ ++.|+|+||||+..
T Consensus 355 ~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~---ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 355 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA---TAAELLKHPFLAKA 407 (423)
T ss_dssp HHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSC---CHHHHTTCGGGGGC
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHCCHHHCCC
T ss_conf 999997279988765012999999999998678956890---99999609875689
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=473.63 Aligned_cols=257 Identities=31% Similarity=0.545 Sum_probs=231.7
Q ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEE
Q ss_conf 89089987500696699999998999789999940410001789999999999998559996778985653163389999
Q 001857 589 DDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVM 668 (1003)
Q Consensus 589 edYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL~~LkHPnIVkLl~~f~d~~~lyLVm 668 (1003)
+.|+++++||+|+||+||+|+++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||+++++|.+.+.+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHH---HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 7538707960272829999999899989999998527656---8999999999998679989991999999899999999
Q ss_pred EECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 76268884999983299999999999999999999976268040347886256357993999516875334457888999
Q 001857 669 EYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLS 748 (1003)
Q Consensus 669 Eyl~GGSL~dlLkk~g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAkv~~~~s~ddls 748 (1003)
|||+||+|.+++.+ +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|||+|+.....
T Consensus 151 Ey~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~------ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 223 (346)
T ss_dssp CCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS------
T ss_pred ECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCC------
T ss_conf 69899808999871-89899999999999999999999888355627889978879998899027575366788------
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 99766754479997410033566643102565688887881001259999632052226899999829999999993567
Q 001857 749 GPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAEHPQQI 828 (1003)
Q Consensus 749 ~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~s~~ei 828 (1003)
.....+.+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+..++
T Consensus 224 -------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~ 278 (346)
T 4fih_A 224 -------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 278 (346)
T ss_dssp -------------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred -------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf -------------------------7753465627582799997799999689999999999999978799898599999
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 7756304789999999899789999975265993786999998898709788899
Q 001857 829 FDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKDI 883 (1003)
Q Consensus 829 ~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~~TAeEILqHPFFk~I 883 (1003)
+..|.....+....+..+|+++++||.+||++||.+|| ++.|+|+||||+..
T Consensus 279 ~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~---ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 279 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA---TAAELLKHPFLAKA 330 (346)
T ss_dssp HHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSC---CHHHHTTCGGGGGC
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHCCHHHCCC
T ss_conf 99997179998875022999999999998679956890---99999609865689
No 8
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=1.00 E-value=1 Score=469.35 Aligned_cols=295 Identities=34% Similarity=0.748 Sum_probs=264.8
Q ss_pred CCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC-CCCCEEEEEEEEECCC
Q ss_conf 985568908998750069669999999899978999994041000178999999999999855-9996778985653163
Q 001857 584 DRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISV-RNPFVVRFFYSFTCRE 662 (1003)
Q Consensus 584 ~~~~ledYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL~~L-kHPnIVkLl~~f~d~~ 662 (1003)
....+++|++++.||+|+||.||+|+++.+++.||+|++++...........+.+|..++..+ +||+|++++++|++.+
T Consensus 336 ~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~ 415 (674)
T 3pfq_A 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD 415 (674)
T ss_dssp ----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECC
T ss_conf 65431022799898059988999999999993899999860112457789999999999985569984888888998588
Q ss_pred EEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf 38999976268884999983299999999999999999999976268040347886256357993999516875334457
Q 001857 663 NLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLIN 742 (1003)
Q Consensus 663 ~lyLVmEyl~GGSL~dlLkk~g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAkv~~~~ 742 (1003)
.+||||||++||+|.+++...+.+++..++.|+.||+.||.|||++|||||||||+|||++.++++||+|||+|+.....
T Consensus 416 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 416 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEEEECCEEECCCCC
T ss_conf 78999937679849999975389888999999999999999998679075448765589837896899665401114568
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCC
Q ss_conf 88899999766754479997410033566643102565688887881001259999632052226899999829999999
Q 001857 743 STDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNA 822 (1003)
Q Consensus 743 s~ddls~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~ 822 (1003)
.......+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+
T Consensus 496 -------------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~ 544 (674)
T 3pfq_A 496 -------------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544 (674)
T ss_dssp -------------------------------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred -------------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHCCCCCCCC
T ss_conf -------------------------------8642345688763597663678999501680618999999709999899
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--CCHHHHHCCCCCCCCCHHHHHHH--CCCCCCC
Q ss_conf 9935677756304789999999899789999975265993786999--99889870978889993378620--2885577
Q 001857 823 EHPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGS--GGASEVKQHVFFKDINWDTLARQ--KAAFVPT 898 (1003)
Q Consensus 823 ~s~~ei~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~--~TAeEILqHPFFk~Idw~~L~~~--~~pfvP~ 898 (1003)
.+..++++.|+.....+ |..++.++.+||.+||++||.+|+++ .++.+|++||||++++|+.+..+ .|||+|.
T Consensus 545 ~~~~~~~~~i~~~~~~~---p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~ 621 (674)
T 3pfq_A 545 EDEDELFQSIMEHNVAY---PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPK 621 (674)
T ss_dssp SSHHHHHHHHHSSCCCC---CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCB
T ss_pred CCHHHHHHHHHHCCCCC---CCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCCC
T ss_conf 89899999998487788---854799999999997447987878998775999862842138899999838899898784
Q ss_pred CCCCCCCCCCCCCCC
Q ss_conf 899878887556545
Q 001857 899 SESALDTSYFTSRYS 913 (1003)
Q Consensus 899 ~~s~lD~s~Fss~~s 913 (1003)
... .|+++|+..|.
T Consensus 622 ~~~-~~~~~f~~~~~ 635 (674)
T 3pfq_A 622 ASG-RNAENFDRFFT 635 (674)
T ss_dssp CCG-GGHHHHTTTTT
T ss_pred CCC-CCHHHCCCHHC
T ss_conf 789-85234680120
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=463.79 Aligned_cols=256 Identities=26% Similarity=0.436 Sum_probs=227.3
Q ss_pred CCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEE
Q ss_conf 85568908998750069669999999899978999994041000178999999999999855999677898565316338
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~ledYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL~~LkHPnIVkLl~~f~d~~~l 664 (1003)
...++.|++.++||+|+||+||+|+++.+|+.||+|++++.... .+|+.+|+.++|||||+++++|.+.+.+
T Consensus 54 ~~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l~HpnIV~l~~~~~~~~~~ 125 (336)
T 4g3f_A 54 REEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVREGPWV 125 (336)
T ss_dssp CBTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTCCCTTBCCEEEEEEETTEE
T ss_pred HCCHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHHH--------HHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 22533517686851387809999998899989999997888869--------9999999857998999399999989999
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC-CEEEEECCCCCCCCCCC
Q ss_conf 99997626888499998329999999999999999999997626804034788625635799-39995168753344578
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDG-HIKLTDFGLSKVGLINS 743 (1003)
Q Consensus 665 yLVmEyl~GGSL~dlLkk~g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G-~IKLsDFGLAkv~~~~s 743 (1003)
|||||||+||+|.+++++.+.+++..++.|+.||+.||.|||++|||||||||+|||++.+| ++||+|||+|+......
T Consensus 126 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCCC
T ss_conf 99996659986999998769999999999999999999999988904261677887995899979996278776856787
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCC
Q ss_conf 88999997667544799974100335666431025656888878810012599996320522268999998299999999
Q 001857 744 TDDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGHGTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 744 ~ddls~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~ys~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
. ..........+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.
T Consensus 206 ~--------------------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~ 259 (336)
T 4g3f_A 206 L--------------------------GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259 (336)
T ss_dssp ----------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred C--------------------------CCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 6--------------------------54022178545580200899988999890899999999999999786998998
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCC
Q ss_conf 935677756304789999999899789999975265993786999998898709
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQH 877 (1003)
Q Consensus 824 s~~ei~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~~TAeEILqH 877 (1003)
+...++.+|.....++..++..+++.+.+||.+||++||.+|| ++.|+++|
T Consensus 260 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~---sa~el~~~ 310 (336)
T 4g3f_A 260 FRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRA---SAMELRRK 310 (336)
T ss_dssp CCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSC---CHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHHH
T ss_conf 9999999998089980025866799999999997628976895---99999999
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=463.27 Aligned_cols=259 Identities=32% Similarity=0.610 Sum_probs=235.8
Q ss_pred CCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEE
Q ss_conf 85568908998750069669999999899978999994041000178999999999999855999677898565316338
Q 001857 585 RTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENL 664 (1003)
Q Consensus 585 ~~~ledYeIlk~LGkGsFGtVylA~dk~tgk~VAIKVIkk~~l~~~~~ie~il~Ei~IL~~LkHPnIVkLl~~f~d~~~l 664 (1003)
+..+++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+|+.++|||||+++++|.+.+.+
T Consensus 9 G~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~ 88 (275)
T 3hyh_A 9 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI 88 (275)
T ss_dssp -----CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCEEECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
T ss_conf 98933868999982176819999999999989999998378867878999999999999877998999299999989989
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99997626888499998329999999999999999999997626804034788625635799399951687533445788
Q 001857 665 YLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINST 744 (1003)
Q Consensus 665 yLVmEyl~GGSL~dlLkk~g~LsEe~vr~Ia~QIL~ALeYLHs~GIIHRDIKPeNILId~~G~IKLsDFGLAkv~~~~s~ 744 (1003)
||||||| +|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...
T Consensus 89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~---- 163 (275)
T 3hyh_A 89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT---- 163 (275)
T ss_dssp EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EEEEECC-CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECC----
T ss_conf 9999278-99789999874999999999999999999999998893066687587688799989994547772667----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC-CCCCEEECHHHHHHHHHHCCCCCCCC
Q ss_conf 89999976675447999741003356664310256568888788100125999-96320522268999998299999999
Q 001857 745 DDLSGPAVSGTTLLGDEEPQLTASEHQQERRKKRSAVGTPDYLAPEILLGTGH-GTTADWWSVGIILFELIVGIPPFNAE 823 (1003)
Q Consensus 745 ddls~p~~~gttL~g~~~~~ls~~~~~~~~~~~~s~vGTp~YmAPEVL~g~~y-s~kSDIWSLGVILYELLTGk~PF~~~ 823 (1003)
......+.+||+.|||||++.+..| +.++|||||||++|+|++|++||.+.
T Consensus 164 ----------------------------~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~ 215 (275)
T 3hyh_A 164 ----------------------------DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp ---------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ----------------------------CCCCCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf ----------------------------8874677028935277455068988898365687899999999887998998
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 93567775630478999999989978999997526599378699999889870978889
Q 001857 824 HPQQIFDNILNRKIPWPRVPEEMSPEAHDLIDRFLTEDPHQRLGSGGASEVKQHVFFKD 882 (1003)
Q Consensus 824 s~~ei~qkIl~~~~~~P~lp~~iS~elkDLI~kLLskDPskRPg~~TAeEILqHPFFk~ 882 (1003)
+...+++.+......+ |..+|+++++||.+||++||.+|| ++.|+++||||+.
T Consensus 216 ~~~~~~~~i~~~~~~~---p~~~s~~~~~li~~~L~~dP~~R~---s~~eil~hpw~k~ 268 (275)
T 3hyh_A 216 SIPVLFKNISNGVYTL---PKFLSPGAAGLIKRMLIVNPLNRI---SIHEIMQDDWFKV 268 (275)
T ss_dssp SHHHHHHHHHHTCCCC---CTTSCHHHHHHHHHHSCSSGGGSC---CHHHHHHCHHHHT
T ss_pred CHHHHHHHHHCCCCCC---CCCCCHHHHHHHHHHCCCCHHHCC---CHHHHHCCCCCCC
T ss_conf 9999999997499999---877999999999998658966891---9999971920065
Done!