Query 001858
Match_columns 1003
No_of_seqs 935 out of 6379
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 10:59:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001858.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001858hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-116 2E-121 1124.9 64.6 921 32-998 26-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 4.1E-61 8.8E-66 613.9 28.3 516 99-626 68-586 (968)
3 KOG1187 Serine/threonine prote 100.0 1.3E-45 2.8E-50 407.5 26.1 291 689-996 61-354 (361)
4 KOG0581 Mitogen-activated prot 100.0 1.6E-45 3.5E-50 380.0 18.9 256 704-993 80-338 (364)
5 KOG0472 Leucine-rich repeat pr 100.0 3.9E-49 8.5E-54 404.8 -11.3 476 78-605 47-544 (565)
6 KOG0472 Leucine-rich repeat pr 100.0 1E-47 2.2E-52 394.4 -8.5 476 101-624 46-541 (565)
7 KOG0615 Serine/threonine prote 100.0 2.8E-44 6E-49 372.1 16.4 256 702-992 171-439 (475)
8 KOG0595 Serine/threonine-prote 100.0 4.9E-44 1.1E-48 371.5 17.0 261 702-988 9-285 (429)
9 KOG0192 Tyrosine kinase specif 100.0 3.1E-43 6.7E-48 384.8 23.3 262 704-1000 42-309 (362)
10 KOG0197 Tyrosine kinases [Sign 100.0 7.8E-44 1.7E-48 385.5 15.3 261 701-998 204-465 (468)
11 KOG0591 NIMA (never in mitosis 100.0 2.6E-44 5.6E-49 353.6 10.2 262 703-993 19-284 (375)
12 KOG0575 Polo-like serine/threo 100.0 6.7E-43 1.5E-47 381.1 21.9 249 703-990 18-269 (592)
13 KOG1026 Nerve growth factor re 100.0 8E-43 1.7E-47 395.6 17.2 266 703-999 486-767 (774)
14 KOG0593 Predicted protein kina 100.0 2.7E-42 5.8E-47 342.9 14.9 270 703-990 2-284 (396)
15 KOG0598 Ribosomal protein S6 k 100.0 2E-41 4.3E-46 349.8 16.7 202 701-920 23-227 (357)
16 KOG0582 Ste20-like serine/thre 100.0 1.3E-40 2.7E-45 348.3 21.6 261 701-990 24-293 (516)
17 KOG4194 Membrane glycoprotein 100.0 3.6E-42 7.8E-47 368.5 9.8 375 200-607 81-458 (873)
18 KOG0592 3-phosphoinositide-dep 100.0 3.4E-41 7.4E-46 360.8 16.7 259 699-991 69-339 (604)
19 KOG0196 Tyrosine kinase, EPH ( 100.0 1.6E-41 3.4E-46 375.5 9.8 260 704-997 630-894 (996)
20 KOG0198 MEKK and related serin 100.0 3.4E-40 7.4E-45 348.9 17.3 265 702-996 16-282 (313)
21 KOG0659 Cdk activating kinase 100.0 5.8E-40 1.3E-44 321.3 16.3 268 703-990 2-281 (318)
22 KOG0600 Cdc2-related protein k 100.0 5.1E-40 1.1E-44 349.1 16.1 273 702-990 116-400 (560)
23 KOG0597 Serine-threonine prote 100.0 4.6E-40 1E-44 351.3 15.1 248 703-990 2-251 (808)
24 KOG0193 Serine/threonine prote 100.0 3.4E-40 7.4E-45 357.4 14.1 268 696-998 385-657 (678)
25 KOG0661 MAPK related serine/th 100.0 4.3E-40 9.3E-45 347.0 13.0 272 701-991 8-292 (538)
26 KOG0578 p21-activated serine/t 100.0 1.2E-39 2.7E-44 352.8 16.4 251 703-990 273-523 (550)
27 KOG4194 Membrane glycoprotein 100.0 3.4E-40 7.4E-45 353.4 8.7 375 88-478 72-450 (873)
28 KOG0583 Serine/threonine prote 100.0 1.9E-38 4E-43 351.2 22.0 251 701-990 15-275 (370)
29 KOG0588 Serine/threonine prote 100.0 2.8E-39 6.1E-44 352.9 14.9 251 702-992 11-265 (786)
30 KOG1095 Protein tyrosine kinas 100.0 7.1E-39 1.5E-43 377.1 18.1 265 703-998 692-965 (1025)
31 KOG0660 Mitogen-activated prot 100.0 1.5E-38 3.2E-43 327.0 17.2 279 701-991 20-311 (359)
32 KOG0605 NDR and related serine 100.0 2.1E-38 4.5E-43 340.3 18.3 258 701-990 139-445 (550)
33 KOG0201 Serine/threonine prote 100.0 2.4E-39 5.1E-44 339.1 9.0 250 702-990 12-263 (467)
34 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.4E-38 2E-42 350.7 22.2 268 701-997 5-337 (338)
35 KOG4721 Serine/threonine prote 100.0 7.5E-39 1.6E-43 341.5 12.1 246 706-998 127-372 (904)
36 KOG0585 Ca2+/calmodulin-depend 100.0 3.8E-38 8.3E-43 331.5 16.9 266 700-995 94-377 (576)
37 KOG4278 Protein tyrosine kinas 100.0 1.2E-38 2.6E-43 342.2 13.2 265 696-996 260-525 (1157)
38 KOG0616 cAMP-dependent protein 100.0 5.8E-38 1.3E-42 311.9 16.3 200 702-922 43-245 (355)
39 KOG2052 Activin A type IB rece 100.0 5.4E-38 1.2E-42 328.4 16.7 282 702-996 210-505 (513)
40 KOG0611 Predicted serine/threo 100.0 3.5E-38 7.6E-43 323.7 14.7 250 702-992 52-305 (668)
41 KOG0194 Protein tyrosine kinas 100.0 4.8E-38 1.1E-42 347.0 16.5 262 701-999 155-425 (474)
42 KOG3653 Transforming growth fa 100.0 8.6E-38 1.9E-42 329.4 16.5 280 703-997 210-506 (534)
43 KOG0658 Glycogen synthase kina 100.0 6.5E-38 1.4E-42 322.9 14.2 271 703-990 24-306 (364)
44 KOG0033 Ca2+/calmodulin-depend 100.0 3.7E-39 8.1E-44 310.7 4.5 255 702-992 10-269 (355)
45 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.4E-37 9.5E-42 345.6 22.0 276 704-990 1-290 (338)
46 KOG0618 Serine/threonine phosp 100.0 3.9E-40 8.4E-45 372.0 -3.3 471 92-623 13-488 (1081)
47 KOG0580 Serine/threonine prote 100.0 1.1E-37 2.5E-42 301.0 12.4 253 701-992 20-275 (281)
48 cd05631 STKc_GRK4 Catalytic do 100.0 5.2E-37 1.1E-41 335.7 19.3 253 704-990 1-261 (285)
49 PHA02988 hypothetical protein; 100.0 2E-36 4.3E-41 330.1 23.1 250 709-996 26-281 (283)
50 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.1E-37 1.3E-41 343.0 19.5 253 703-990 1-257 (333)
51 KOG2345 Serine/threonine prote 100.0 9.9E-38 2.1E-42 302.6 11.2 275 701-994 19-300 (302)
52 KOG0663 Protein kinase PITSLRE 100.0 6E-37 1.3E-41 309.0 17.2 272 702-990 75-361 (419)
53 KOG0589 Serine/threonine prote 100.0 2.2E-37 4.7E-42 335.0 14.7 252 703-990 4-258 (426)
54 cd05612 STKc_PRKX_like Catalyt 100.0 9E-37 1.9E-41 334.7 18.8 247 703-991 1-255 (291)
55 cd05096 PTKc_DDR1 Catalytic do 100.0 1.6E-36 3.4E-41 335.4 20.7 267 702-992 4-303 (304)
56 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-36 3.5E-41 337.8 20.9 243 709-990 1-251 (323)
57 cd07848 STKc_CDKL5 Catalytic d 100.0 1.3E-36 2.9E-41 333.2 19.8 271 703-990 1-284 (287)
58 PTZ00263 protein kinase A cata 100.0 1.4E-36 3.1E-41 338.9 20.3 247 702-990 17-271 (329)
59 KOG4257 Focal adhesion tyrosin 100.0 4.5E-37 9.7E-42 331.2 15.4 255 705-996 391-651 (974)
60 cd06649 PKc_MEK2 Catalytic dom 100.0 2.3E-36 5E-41 337.8 21.9 268 702-992 4-303 (331)
61 KOG0594 Protein kinase PCTAIRE 100.0 8.1E-37 1.8E-41 316.2 16.4 279 702-990 10-302 (323)
62 KOG0444 Cytoskeletal regulator 100.0 3.1E-39 6.7E-44 347.2 -1.8 385 99-595 6-393 (1255)
63 cd07862 STKc_CDK6 Catalytic do 100.0 3.9E-36 8.5E-41 330.1 21.6 274 703-990 1-287 (290)
64 KOG0694 Serine/threonine prote 100.0 1.7E-36 3.7E-41 334.7 18.1 244 701-984 366-613 (694)
65 cd05104 PTKc_Kit Catalytic dom 100.0 8E-36 1.7E-40 338.4 23.7 263 702-994 34-374 (375)
66 KOG1094 Discoidin domain recep 100.0 7.6E-37 1.6E-41 327.9 14.3 263 703-994 538-804 (807)
67 KOG0599 Phosphorylase kinase g 100.0 1.2E-36 2.5E-41 297.8 13.7 257 699-991 13-284 (411)
68 cd05595 STKc_PKB_beta Catalyti 100.0 5.8E-36 1.3E-40 333.1 21.4 243 709-990 1-251 (323)
69 KOG0618 Serine/threonine phosp 100.0 3.4E-39 7.4E-44 364.4 -4.8 485 77-598 22-510 (1081)
70 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.5E-36 1.8E-40 326.6 22.1 269 703-990 5-285 (288)
71 KOG0574 STE20-like serine/thre 100.0 4.2E-38 9.1E-43 311.4 3.5 251 704-991 34-284 (502)
72 cd05599 STKc_NDR_like Catalyti 100.0 2.7E-36 5.9E-41 342.4 18.7 256 703-990 1-296 (364)
73 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.5E-36 1.2E-40 324.2 20.1 257 702-994 4-265 (266)
74 cd05593 STKc_PKB_gamma Catalyt 100.0 8.2E-36 1.8E-40 332.4 21.9 243 709-990 1-251 (328)
75 cd05106 PTKc_CSF-1R Catalytic 100.0 9E-36 1.9E-40 337.6 22.4 265 701-995 36-373 (374)
76 cd05628 STKc_NDR1 Catalytic do 100.0 5.5E-36 1.2E-40 339.1 20.5 206 703-921 1-239 (363)
77 cd05626 STKc_LATS2 Catalytic d 100.0 5.5E-36 1.2E-40 341.2 20.6 256 704-990 2-305 (381)
78 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.1E-36 1.8E-40 329.5 21.3 271 702-990 4-288 (303)
79 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-35 2.3E-40 325.4 21.4 260 703-993 5-282 (283)
80 cd05585 STKc_YPK1_like Catalyt 100.0 8.7E-36 1.9E-40 330.3 20.7 241 711-990 1-247 (312)
81 cd06650 PKc_MEK1 Catalytic dom 100.0 9.2E-36 2E-40 332.8 21.0 267 702-991 4-300 (333)
82 PTZ00426 cAMP-dependent protei 100.0 5.7E-36 1.2E-40 334.6 18.8 247 702-990 29-284 (340)
83 KOG1989 ARK protein kinase fam 100.0 4E-36 8.7E-41 343.4 17.6 269 702-997 36-314 (738)
84 cd05054 PTKc_VEGFR Catalytic d 100.0 1.3E-35 2.8E-40 331.8 21.1 266 702-996 6-335 (337)
85 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.6E-36 9.9E-41 339.0 17.6 255 703-990 1-285 (350)
86 cd08228 STKc_Nek6 Catalytic do 100.0 2E-35 4.3E-40 320.3 21.8 262 703-995 2-266 (267)
87 cd05052 PTKc_Abl Catalytic dom 100.0 3.1E-35 6.6E-40 318.0 22.9 257 702-994 5-262 (263)
88 KOG0444 Cytoskeletal regulator 100.0 2.5E-38 5.5E-43 340.3 -1.3 381 75-472 6-391 (1255)
89 PTZ00283 serine/threonine prot 100.0 1.2E-35 2.6E-40 346.8 20.3 263 701-990 30-297 (496)
90 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-35 3.5E-40 323.9 20.0 253 704-990 1-261 (285)
91 PTZ00267 NIMA-related protein 100.0 1.2E-35 2.5E-40 347.2 20.1 256 703-990 67-323 (478)
92 cd05598 STKc_LATS Catalytic do 100.0 5.8E-36 1.3E-40 341.0 17.1 257 703-990 1-301 (376)
93 PHA03212 serine/threonine kina 100.0 2.5E-35 5.4E-40 334.8 22.2 265 702-990 91-376 (391)
94 cd05625 STKc_LATS1 Catalytic d 100.0 1E-35 2.2E-40 339.6 19.1 205 704-921 2-251 (382)
95 cd05629 STKc_NDR_like_fungal C 100.0 9.7E-36 2.1E-40 339.1 18.8 257 703-991 1-306 (377)
96 cd07863 STKc_CDK4 Catalytic do 100.0 2.5E-35 5.5E-40 323.4 20.9 273 704-990 1-285 (288)
97 cd05108 PTKc_EGFR Catalytic do 100.0 4.6E-35 1E-39 325.4 23.2 261 702-998 6-272 (316)
98 PLN00034 mitogen-activated pro 100.0 8.9E-36 1.9E-40 336.2 17.7 250 703-991 74-329 (353)
99 cd05596 STKc_ROCK Catalytic do 100.0 1.5E-35 3.3E-40 335.4 19.6 256 701-991 41-305 (370)
100 cd05601 STKc_CRIK Catalytic do 100.0 6.9E-36 1.5E-40 334.2 16.4 253 703-990 1-263 (330)
101 cd05594 STKc_PKB_alpha Catalyt 100.0 1.6E-35 3.5E-40 330.2 19.2 243 709-990 1-252 (325)
102 cd05587 STKc_cPKC Catalytic do 100.0 3.3E-35 7.2E-40 327.5 21.4 248 704-990 1-257 (324)
103 cd05590 STKc_nPKC_eta Catalyti 100.0 2.9E-35 6.2E-40 327.0 20.9 243 709-990 1-253 (320)
104 KOG0577 Serine/threonine prote 100.0 3.8E-36 8.2E-41 322.1 13.1 251 704-995 27-283 (948)
105 cd05589 STKc_PKN Catalytic dom 100.0 3.3E-35 7.1E-40 327.5 21.4 246 705-990 1-257 (324)
106 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-35 2.8E-40 320.6 17.6 257 701-994 4-261 (261)
107 cd05621 STKc_ROCK2 Catalytic d 100.0 1.9E-35 4.2E-40 334.1 19.5 257 700-991 40-305 (370)
108 cd05592 STKc_nPKC_theta_delta 100.0 4.9E-35 1.1E-39 324.6 22.3 242 709-989 1-247 (316)
109 PRK13184 pknD serine/threonine 100.0 3.5E-35 7.7E-40 349.4 22.4 269 703-997 2-293 (932)
110 cd06646 STKc_MAP4K5 Catalytic 100.0 3E-35 6.4E-40 318.9 19.8 256 702-991 8-266 (267)
111 cd05591 STKc_nPKC_epsilon Cata 100.0 3.5E-35 7.5E-40 326.9 20.7 243 709-990 1-254 (321)
112 cd05093 PTKc_TrkB Catalytic do 100.0 7.9E-35 1.7E-39 319.2 23.2 265 702-997 4-282 (288)
113 KOG0610 Putative serine/threon 100.0 3E-35 6.4E-40 305.9 18.3 259 702-990 76-392 (459)
114 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-34 2.4E-39 314.3 23.7 258 702-994 3-265 (266)
115 KOG4279 Serine/threonine prote 100.0 4.7E-36 1E-40 326.3 12.8 246 710-990 582-832 (1226)
116 cd05072 PTKc_Lyn Catalytic dom 100.0 7.7E-35 1.7E-39 314.5 22.3 255 702-993 5-260 (261)
117 cd05614 STKc_MSK2_N N-terminal 100.0 5.1E-35 1.1E-39 327.5 21.6 253 704-990 1-267 (332)
118 PF07714 Pkinase_Tyr: Protein 100.0 2E-35 4.4E-40 318.1 17.6 251 707-991 3-259 (259)
119 KOG0199 ACK and related non-re 100.0 6.2E-36 1.3E-40 326.5 13.5 256 704-993 111-371 (1039)
120 cd05608 STKc_GRK1 Catalytic do 100.0 2.9E-35 6.3E-40 321.0 19.0 249 711-990 1-257 (280)
121 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-34 2.4E-39 312.3 23.2 251 703-991 4-255 (256)
122 cd05620 STKc_nPKC_delta Cataly 100.0 5.3E-35 1.2E-39 324.3 21.2 242 709-989 1-247 (316)
123 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.9E-35 8.4E-40 333.2 20.5 266 701-996 35-399 (400)
124 cd05584 STKc_p70S6K Catalytic 100.0 7E-35 1.5E-39 324.6 22.1 243 709-990 2-256 (323)
125 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-34 3.3E-39 315.2 24.3 259 703-997 7-271 (279)
126 cd05619 STKc_nPKC_theta Cataly 100.0 6.2E-35 1.4E-39 323.5 21.5 242 709-989 1-247 (316)
127 cd05588 STKc_aPKC Catalytic do 100.0 3.7E-35 8E-40 327.6 19.8 252 709-990 1-262 (329)
128 cd08529 STKc_FA2-like Catalyti 100.0 1.2E-34 2.5E-39 312.2 22.7 251 704-990 1-253 (256)
129 cd05618 STKc_aPKC_iota Catalyt 100.0 3.7E-35 8E-40 327.3 19.4 252 709-990 1-262 (329)
130 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-34 2.7E-39 318.1 23.0 265 702-997 4-285 (291)
131 cd05616 STKc_cPKC_beta Catalyt 100.0 7.5E-35 1.6E-39 324.5 21.3 248 704-990 1-257 (323)
132 cd05575 STKc_SGK Catalytic dom 100.0 6.2E-35 1.3E-39 325.2 20.6 238 709-985 1-242 (323)
133 cd07876 STKc_JNK2 Catalytic do 100.0 1.3E-34 2.8E-39 327.7 23.5 273 701-991 19-316 (359)
134 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-34 3.1E-39 316.6 23.1 271 703-994 4-283 (284)
135 cd05622 STKc_ROCK1 Catalytic d 100.0 4.2E-35 9.1E-40 331.7 19.4 262 695-991 35-305 (371)
136 cd05570 STKc_PKC Catalytic dom 100.0 8E-35 1.7E-39 323.4 21.0 243 709-990 1-252 (318)
137 cd06637 STKc_TNIK Catalytic do 100.0 5.5E-35 1.2E-39 317.8 19.3 260 700-990 3-269 (272)
138 PTZ00036 glycogen synthase kin 100.0 8.4E-35 1.8E-39 335.9 21.9 273 702-990 65-351 (440)
139 cd05049 PTKc_Trk Catalytic dom 100.0 9.4E-35 2E-39 317.4 20.9 260 702-992 4-279 (280)
140 cd05065 PTKc_EphR_B Catalytic 100.0 1.1E-34 2.4E-39 314.8 21.3 260 703-994 4-268 (269)
141 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.3E-34 4.9E-39 314.8 23.6 271 705-995 6-282 (283)
142 cd05075 PTKc_Axl Catalytic dom 100.0 2.2E-34 4.8E-39 313.1 23.3 264 705-994 1-271 (272)
143 cd08229 STKc_Nek7 Catalytic do 100.0 7.7E-35 1.7E-39 315.7 19.5 262 703-995 2-266 (267)
144 cd05035 PTKc_Axl_like Catalyti 100.0 3E-34 6.5E-39 312.2 24.2 264 705-994 1-272 (273)
145 KOG0032 Ca2+/calmodulin-depend 100.0 9.5E-35 2.1E-39 321.0 20.5 254 701-991 33-294 (382)
146 cd05607 STKc_GRK7 Catalytic do 100.0 1.5E-34 3.2E-39 314.9 21.7 247 711-990 1-250 (277)
147 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.3E-34 9.2E-39 309.9 25.2 262 703-995 2-266 (267)
148 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-34 3.2E-39 318.5 21.7 264 703-1000 2-281 (297)
149 cd05062 PTKc_IGF-1R Catalytic 100.0 9E-35 2E-39 316.9 19.7 260 701-992 4-276 (277)
150 cd05051 PTKc_DDR Catalytic dom 100.0 1.5E-34 3.2E-39 318.6 21.2 267 702-992 4-295 (296)
151 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.1E-34 4.6E-39 309.9 21.7 252 703-992 4-256 (256)
152 cd05071 PTKc_Src Catalytic dom 100.0 2.7E-34 5.9E-39 310.2 22.6 255 702-994 5-260 (262)
153 cd06625 STKc_MEKK3_like Cataly 100.0 2E-34 4.2E-39 311.8 21.4 254 703-990 2-260 (263)
154 cd06615 PKc_MEK Catalytic doma 100.0 1.2E-34 2.7E-39 320.6 20.0 267 703-992 1-289 (308)
155 PTZ00284 protein kinase; Provi 100.0 1.6E-34 3.5E-39 337.7 22.1 271 698-990 124-438 (467)
156 cd05615 STKc_cPKC_alpha Cataly 100.0 1.8E-34 3.9E-39 321.1 21.4 242 704-984 1-246 (323)
157 cd05627 STKc_NDR2 Catalytic do 100.0 5.4E-35 1.2E-39 330.7 17.5 206 703-921 1-239 (360)
158 cd05068 PTKc_Frk_like Catalyti 100.0 2.4E-34 5.2E-39 310.6 21.8 255 702-993 5-260 (261)
159 cd06638 STKc_myosinIIIA Cataly 100.0 1.5E-34 3.2E-39 316.9 20.4 270 694-991 9-284 (286)
160 cd08219 STKc_Nek3 Catalytic do 100.0 1.7E-34 3.7E-39 310.7 20.2 251 704-990 1-252 (255)
161 cd05632 STKc_GRK5 Catalytic do 100.0 1.8E-34 3.9E-39 315.6 20.6 252 705-990 2-261 (285)
162 cd06654 STKc_PAK1 Catalytic do 100.0 1.6E-34 3.4E-39 317.8 20.3 252 702-990 19-270 (296)
163 cd05088 PTKc_Tie2 Catalytic do 100.0 3E-34 6.5E-39 316.7 22.5 262 702-997 6-283 (303)
164 cd05053 PTKc_FGFR Catalytic do 100.0 2.3E-34 5E-39 316.6 21.5 264 701-995 10-292 (293)
165 cd05090 PTKc_Ror1 Catalytic do 100.0 1.4E-34 3.1E-39 316.5 19.6 260 703-993 5-282 (283)
166 cd06645 STKc_MAP4K3 Catalytic 100.0 1.2E-34 2.7E-39 314.1 18.9 255 702-990 8-265 (267)
167 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.6E-34 3.4E-39 324.5 20.3 266 702-996 6-341 (343)
168 cd07853 STKc_NLK Catalytic dom 100.0 2.4E-34 5.2E-39 327.0 22.0 274 704-991 1-289 (372)
169 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-34 3.8E-39 310.0 19.7 249 709-992 1-251 (252)
170 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.2E-34 4.7E-39 313.8 20.7 261 701-992 4-276 (277)
171 cd07874 STKc_JNK3 Catalytic do 100.0 1E-34 2.2E-39 328.2 18.7 272 701-990 15-311 (355)
172 cd05109 PTKc_HER2 Catalytic do 100.0 3.9E-34 8.4E-39 312.3 22.7 261 702-998 6-272 (279)
173 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.1E-34 4.5E-39 319.2 20.6 270 703-991 6-287 (309)
174 cd06613 STKc_MAP4K3_like Catal 100.0 5.1E-34 1.1E-38 308.3 23.2 255 703-990 3-260 (262)
175 cd05059 PTKc_Tec_like Catalyti 100.0 4.3E-34 9.4E-39 307.6 22.5 251 703-991 4-255 (256)
176 cd05604 STKc_SGK3 Catalytic do 100.0 1.2E-34 2.7E-39 323.1 18.8 238 709-985 1-242 (325)
177 PF00069 Pkinase: Protein kina 100.0 4.9E-35 1.1E-39 315.9 15.1 254 705-990 1-257 (260)
178 cd06639 STKc_myosinIIIB Cataly 100.0 2.1E-34 4.5E-39 316.5 20.2 269 694-990 13-287 (291)
179 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-34 5.3E-39 316.6 20.7 267 702-992 4-295 (296)
180 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.4E-34 5.1E-39 320.8 20.8 250 709-990 1-260 (327)
181 cd05602 STKc_SGK1 Catalytic do 100.0 1.8E-34 4E-39 321.7 19.9 241 709-988 1-245 (325)
182 cd05045 PTKc_RET Catalytic dom 100.0 3.8E-34 8.2E-39 314.2 22.0 262 704-996 1-288 (290)
183 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-34 4.5E-39 320.8 20.2 238 709-985 1-242 (321)
184 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.4E-34 7.4E-39 310.8 21.3 259 702-994 4-267 (268)
185 cd06643 STKc_SLK Catalytic dom 100.0 2.9E-34 6.3E-39 313.8 20.8 252 704-990 6-262 (282)
186 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.8E-34 6E-39 323.1 21.1 271 700-990 12-298 (343)
187 KOG0667 Dual-specificity tyros 100.0 1.1E-34 2.3E-39 321.3 16.9 199 702-921 185-391 (586)
188 cd05082 PTKc_Csk Catalytic dom 100.0 4.6E-34 1E-38 307.5 21.5 249 703-993 6-255 (256)
189 cd05116 PTKc_Syk Catalytic dom 100.0 5.6E-34 1.2E-38 307.0 22.2 249 710-994 2-255 (257)
190 cd05092 PTKc_TrkA Catalytic do 100.0 3.5E-34 7.5E-39 312.7 20.8 260 702-992 4-279 (280)
191 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.1E-34 1.8E-38 306.3 23.4 254 702-993 5-259 (260)
192 cd05043 PTK_Ryk Pseudokinase d 100.0 5.2E-34 1.1E-38 311.5 22.0 267 701-997 4-279 (280)
193 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.3E-34 9.3E-39 309.9 21.1 254 704-990 1-264 (267)
194 cd05055 PTKc_PDGFR Catalytic d 100.0 8.4E-34 1.8E-38 312.8 23.7 260 702-994 34-301 (302)
195 cd06611 STKc_SLK_like Catalyti 100.0 2.3E-34 4.9E-39 314.4 18.9 254 702-990 4-262 (280)
196 cd07875 STKc_JNK1 Catalytic do 100.0 3.2E-34 7E-39 325.1 20.8 272 701-990 22-318 (364)
197 cd06644 STKc_STK10_LOK Catalyt 100.0 5.1E-34 1.1E-38 313.5 21.7 253 703-990 12-269 (292)
198 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.3E-34 7.2E-39 313.6 20.1 265 702-993 4-269 (284)
199 cd05582 STKc_RSK_N N-terminal 100.0 1.5E-34 3.3E-39 321.4 17.7 239 709-986 2-245 (318)
200 cd05097 PTKc_DDR_like Catalyti 100.0 3.2E-34 6.9E-39 315.6 19.8 267 702-992 4-294 (295)
201 cd05098 PTKc_FGFR1 Catalytic d 100.0 5E-34 1.1E-38 315.8 21.5 267 702-999 17-304 (307)
202 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.9E-34 1.1E-38 324.0 21.9 266 700-995 34-400 (401)
203 cd05597 STKc_DMPK_like Catalyt 100.0 3.8E-34 8.2E-39 319.7 20.6 202 703-920 1-210 (331)
204 cd05630 STKc_GRK6 Catalytic do 100.0 3.4E-34 7.4E-39 313.3 19.8 253 704-990 1-261 (285)
205 cd05091 PTKc_Ror2 Catalytic do 100.0 2.7E-34 5.9E-39 314.2 18.9 260 703-993 5-282 (283)
206 cd05058 PTKc_Met_Ron Catalytic 100.0 6.5E-34 1.4E-38 307.5 21.4 256 709-996 1-261 (262)
207 cd05066 PTKc_EphR_A Catalytic 100.0 5.6E-34 1.2E-38 308.9 20.8 259 702-994 3-266 (267)
208 cd06619 PKc_MKK5 Catalytic dom 100.0 3.9E-34 8.4E-39 312.1 19.6 253 703-991 1-254 (279)
209 cd05101 PTKc_FGFR2 Catalytic d 100.0 9.7E-34 2.1E-38 313.1 23.0 266 701-997 13-299 (304)
210 KOG4717 Serine/threonine prote 100.0 1.6E-34 3.5E-39 305.0 15.8 251 701-990 16-270 (864)
211 PTZ00266 NIMA-related protein 100.0 3.3E-34 7.2E-39 342.2 20.6 261 700-990 10-295 (1021)
212 cd05032 PTKc_InsR_like Catalyt 100.0 7.3E-34 1.6E-38 309.9 21.6 260 702-992 5-276 (277)
213 KOG1025 Epidermal growth facto 100.0 4.4E-35 9.4E-40 325.3 12.0 257 704-996 697-959 (1177)
214 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.7E-34 1.2E-38 307.5 20.6 254 702-993 5-259 (260)
215 cd05060 PTKc_Syk_like Catalyti 100.0 8E-34 1.7E-38 305.8 21.6 251 709-995 1-256 (257)
216 cd06656 STKc_PAK3 Catalytic do 100.0 4.8E-34 1E-38 314.1 20.2 252 702-990 18-269 (297)
217 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-33 2.3E-38 304.8 22.3 252 704-990 1-254 (257)
218 cd08221 STKc_Nek9 Catalytic do 100.0 1.3E-33 2.7E-38 304.1 22.7 252 704-991 1-254 (256)
219 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.4E-33 3E-38 308.7 23.3 274 703-994 4-283 (284)
220 cd05115 PTKc_Zap-70 Catalytic 100.0 6.7E-34 1.4E-38 306.1 20.5 250 710-994 2-255 (257)
221 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.3E-34 1.1E-38 311.8 19.9 266 694-990 7-279 (282)
222 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-33 2.4E-38 314.1 22.7 268 702-1000 11-299 (314)
223 cd00192 PTKc Catalytic domain 100.0 1E-33 2.2E-38 305.8 21.9 253 709-992 1-262 (262)
224 KOG0584 Serine/threonine prote 100.0 5.6E-35 1.2E-39 319.6 11.9 249 706-990 43-296 (632)
225 KOG0983 Mitogen-activated prot 100.0 1E-34 2.2E-39 284.6 12.4 253 703-990 92-349 (391)
226 cd06651 STKc_MEKK3 Catalytic d 100.0 1.2E-33 2.6E-38 306.1 22.2 255 703-990 2-261 (266)
227 cd05069 PTKc_Yes Catalytic dom 100.0 1.7E-33 3.6E-38 303.9 23.2 253 703-993 6-259 (260)
228 cd06612 STKc_MST1_2 Catalytic 100.0 7.9E-34 1.7E-38 305.7 20.7 252 702-990 2-253 (256)
229 cd07861 STKc_CDK1_euk Catalyti 100.0 7.2E-34 1.6E-38 311.3 20.6 270 704-990 1-282 (285)
230 cd06655 STKc_PAK2 Catalytic do 100.0 8E-34 1.7E-38 312.0 21.0 251 703-990 19-269 (296)
231 cd05624 STKc_MRCK_beta Catalyt 100.0 5E-34 1.1E-38 318.7 19.6 256 703-990 1-266 (331)
232 cd06624 STKc_ASK Catalytic dom 100.0 7.3E-34 1.6E-38 308.2 20.1 255 701-990 6-265 (268)
233 cd05623 STKc_MRCK_alpha Cataly 100.0 8E-34 1.7E-38 317.4 20.6 256 703-990 1-266 (332)
234 KOG0596 Dual specificity; seri 100.0 1.8E-34 3.8E-39 309.0 14.2 255 701-990 359-627 (677)
235 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1E-33 2.2E-38 310.0 20.6 274 703-994 4-283 (284)
236 cd08218 STKc_Nek1 Catalytic do 100.0 1.2E-33 2.5E-38 304.4 20.7 251 704-990 1-253 (256)
237 KOG0579 Ste20-like serine/thre 100.0 3.7E-35 8.1E-40 316.1 8.9 253 703-990 32-289 (1187)
238 cd07868 STKc_CDK8 Catalytic do 100.0 2.5E-33 5.5E-38 311.9 24.0 203 708-921 6-219 (317)
239 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-33 2.3E-38 307.2 20.5 259 702-997 5-268 (270)
240 cd07839 STKc_CDK5 Catalytic do 100.0 7E-34 1.5E-38 311.2 19.2 269 704-990 1-281 (284)
241 PHA03209 serine/threonine kina 100.0 1.3E-33 2.8E-38 318.5 21.9 265 701-990 64-351 (357)
242 cd05061 PTKc_InsR Catalytic do 100.0 1E-33 2.2E-38 310.3 20.5 262 701-994 4-278 (288)
243 cd06640 STKc_MST4 Catalytic do 100.0 1.7E-33 3.6E-38 306.9 22.0 249 703-990 4-253 (277)
244 cd05039 PTKc_Csk_like Catalyti 100.0 2.4E-33 5.1E-38 302.0 22.8 250 702-993 5-255 (256)
245 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-33 2.6E-38 304.4 20.5 251 709-992 1-256 (257)
246 cd05047 PTKc_Tie Catalytic dom 100.0 1.2E-33 2.5E-38 306.8 20.5 253 709-995 1-269 (270)
247 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.8E-34 1.7E-38 311.1 19.2 256 703-991 1-263 (286)
248 PHA03207 serine/threonine kina 100.0 5.6E-34 1.2E-38 325.6 18.8 267 702-990 91-375 (392)
249 cd05034 PTKc_Src_like Catalyti 100.0 2.2E-33 4.8E-38 303.2 22.4 256 701-993 4-260 (261)
250 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.3E-33 5.1E-38 304.4 22.4 257 709-992 1-268 (269)
251 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-33 2.6E-38 315.6 20.6 272 707-990 2-307 (327)
252 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.3E-34 1.6E-38 313.7 18.7 269 703-990 6-286 (301)
253 cd06608 STKc_myosinIII_like Ca 100.0 1.3E-33 2.9E-38 307.4 20.3 262 701-990 4-272 (275)
254 PHA03211 serine/threonine kina 100.0 1.8E-33 3.8E-38 322.9 22.2 267 702-990 168-455 (461)
255 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-33 3.3E-38 306.7 20.7 250 703-990 1-251 (274)
256 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-33 2.6E-38 316.8 20.3 276 702-990 4-292 (336)
257 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-33 3.1E-38 306.0 20.3 256 709-991 1-267 (269)
258 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.2E-33 4.8E-38 304.3 21.6 260 703-990 1-264 (267)
259 cd06652 STKc_MEKK2 Catalytic d 100.0 2.5E-33 5.4E-38 303.5 22.0 255 703-990 2-261 (265)
260 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.2E-33 4.8E-38 307.5 21.8 266 703-991 1-267 (287)
261 cd05586 STKc_Sck1_like Catalyt 100.0 4.6E-34 1E-38 319.3 16.8 242 711-990 1-253 (330)
262 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.3E-33 7.2E-38 301.5 22.9 240 709-991 1-261 (262)
263 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.9E-33 6.4E-38 313.4 23.2 264 702-996 11-295 (334)
264 cd05057 PTKc_EGFR_like Catalyt 100.0 3.8E-33 8.3E-38 304.4 23.4 261 702-998 6-272 (279)
265 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.7E-33 3.7E-38 308.5 20.5 269 703-990 1-283 (286)
266 cd08217 STKc_Nek2 Catalytic do 100.0 2.5E-33 5.3E-38 303.4 21.4 255 704-990 1-262 (265)
267 cd05110 PTKc_HER4 Catalytic do 100.0 3.2E-33 7E-38 308.6 22.3 261 702-998 6-272 (303)
268 cd06642 STKc_STK25-YSK1 Cataly 100.0 8E-34 1.7E-38 309.4 17.2 249 704-991 5-254 (277)
269 cd05085 PTKc_Fer Catalytic dom 100.0 2E-33 4.2E-38 301.5 19.8 247 709-992 1-249 (250)
270 cd05050 PTKc_Musk Catalytic do 100.0 1.7E-33 3.8E-38 308.7 19.8 260 702-992 4-287 (288)
271 cd06626 STKc_MEKK4 Catalytic d 100.0 4.7E-33 1E-37 301.2 22.4 256 704-990 1-261 (264)
272 cd06630 STKc_MEKK1 Catalytic d 100.0 4E-33 8.8E-38 302.4 21.7 257 704-990 1-264 (268)
273 cd06605 PKc_MAPKK Catalytic do 100.0 1.9E-33 4.1E-38 304.5 18.9 255 703-990 1-257 (265)
274 cd07860 STKc_CDK2_3 Catalytic 100.0 3.2E-33 7E-38 305.9 20.9 269 704-990 1-281 (284)
275 cd08220 STKc_Nek8 Catalytic do 100.0 4.7E-33 1E-37 299.7 21.8 250 704-990 1-253 (256)
276 cd05073 PTKc_Hck Catalytic dom 100.0 5.5E-33 1.2E-37 299.8 22.3 254 702-993 5-259 (260)
277 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.2E-33 2.6E-38 309.7 17.4 269 703-990 1-283 (286)
278 cd05112 PTKc_Itk Catalytic dom 100.0 5.7E-33 1.2E-37 299.0 22.3 251 702-991 3-255 (256)
279 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-33 2.5E-38 310.2 17.0 251 703-990 22-272 (292)
280 cd06631 STKc_YSK4 Catalytic do 100.0 6.6E-33 1.4E-37 300.2 22.6 255 704-990 1-262 (265)
281 cd05574 STKc_phototropin_like 100.0 4.1E-33 8.8E-38 310.1 21.3 258 703-990 1-289 (316)
282 KOG0986 G protein-coupled rece 100.0 3.4E-34 7.3E-39 299.6 11.7 247 702-982 184-433 (591)
283 KOG0604 MAP kinase-activated p 100.0 7.8E-34 1.7E-38 282.1 13.7 260 701-991 59-323 (400)
284 cd05044 PTKc_c-ros Catalytic d 100.0 2.7E-33 5.8E-38 304.0 19.4 253 709-992 1-268 (269)
285 cd06632 STKc_MEKK1_plant Catal 100.0 3.1E-33 6.7E-38 301.4 19.6 249 704-990 1-255 (258)
286 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.4E-33 9.5E-38 302.6 20.8 239 710-991 2-273 (274)
287 cd07867 STKc_CDC2L6 Catalytic 100.0 9.1E-33 2E-37 307.6 23.3 203 708-921 6-219 (317)
288 cd05046 PTK_CCK4 Pseudokinase 100.0 3.1E-33 6.6E-38 304.6 19.1 259 703-992 5-274 (275)
289 cd06647 STKc_PAK_I Catalytic d 100.0 3.9E-33 8.4E-38 306.2 20.0 252 702-990 18-269 (293)
290 cd07841 STKc_CDK7 Catalytic do 100.0 4.1E-33 9E-38 307.4 20.3 268 704-990 1-282 (298)
291 PHA02882 putative serine/threo 100.0 5.4E-33 1.2E-37 305.2 21.0 267 702-991 11-293 (294)
292 smart00219 TyrKc Tyrosine kina 100.0 9.5E-33 2.1E-37 297.6 22.6 252 705-991 1-258 (258)
293 cd07855 STKc_ERK5 Catalytic do 100.0 5.2E-33 1.1E-37 311.4 21.0 279 702-992 4-296 (334)
294 cd05609 STKc_MAST Catalytic do 100.0 6.9E-33 1.5E-37 306.4 21.7 256 703-989 1-269 (305)
295 cd07832 STKc_CCRK Catalytic do 100.0 4.3E-33 9.2E-38 305.4 19.8 269 704-990 1-282 (286)
296 cd05041 PTKc_Fes_like Catalyti 100.0 5.6E-33 1.2E-37 298.1 20.2 248 709-992 1-250 (251)
297 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-32 2.3E-37 298.3 22.6 253 703-990 1-256 (264)
298 KOG4645 MAPKKK (MAP kinase kin 100.0 1E-34 2.2E-39 338.6 7.1 255 703-990 1235-1494(1509)
299 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.5E-33 9.7E-38 312.2 20.1 278 702-994 4-297 (337)
300 cd07837 STKc_CdkB_plant Cataly 100.0 6E-33 1.3E-37 305.7 20.7 278 703-990 1-291 (295)
301 cd07844 STKc_PCTAIRE_like Cata 100.0 6.1E-33 1.3E-37 304.9 20.7 270 703-990 5-288 (291)
302 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.3E-33 5.1E-38 302.2 17.1 240 709-991 1-257 (258)
303 cd05580 STKc_PKA Catalytic dom 100.0 7.7E-33 1.7E-37 303.7 21.4 246 703-990 1-254 (290)
304 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.7E-33 2.1E-37 302.0 22.1 256 703-991 1-262 (283)
305 cd06629 STKc_MAPKKK_Bck1_like 100.0 8.7E-33 1.9E-37 300.5 21.6 256 704-990 2-269 (272)
306 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.8E-33 1E-37 305.7 19.6 272 701-990 3-288 (291)
307 KOG0666 Cyclin C-dependent kin 100.0 9.3E-34 2E-38 282.7 12.3 210 702-921 23-243 (438)
308 cd06659 STKc_PAK6 Catalytic do 100.0 2.6E-33 5.6E-38 308.2 17.2 250 704-990 22-271 (297)
309 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.5E-33 1.2E-37 299.7 19.0 238 709-991 1-258 (259)
310 cd07835 STKc_CDK1_like Catalyt 100.0 6.5E-33 1.4E-37 303.4 19.8 268 705-990 1-280 (283)
311 cd06648 STKc_PAK_II Catalytic 100.0 9.9E-33 2.1E-37 301.8 21.1 250 704-990 20-269 (285)
312 cd05083 PTKc_Chk Catalytic dom 100.0 8.1E-33 1.8E-37 297.4 20.0 247 703-993 6-253 (254)
313 cd07842 STKc_CDK8_like Catalyt 100.0 9.3E-33 2E-37 307.4 21.2 278 704-990 1-313 (316)
314 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-32 3.1E-37 299.0 22.2 264 705-994 1-272 (273)
315 cd08528 STKc_Nek10 Catalytic d 100.0 8E-33 1.7E-37 300.2 19.4 255 704-992 1-268 (269)
316 cd06917 STKc_NAK1_like Catalyt 100.0 1.4E-32 3.1E-37 299.6 20.9 249 704-990 2-255 (277)
317 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.8E-32 6E-37 295.6 22.8 254 709-992 1-267 (268)
318 cd05578 STKc_Yank1 Catalytic d 100.0 6.5E-33 1.4E-37 298.9 17.6 249 704-989 1-254 (258)
319 cd06641 STKc_MST3 Catalytic do 100.0 1.5E-32 3.2E-37 299.4 20.2 249 703-990 4-253 (277)
320 cd06616 PKc_MKK4 Catalytic dom 100.0 9.2E-33 2E-37 303.0 18.4 257 704-990 5-267 (288)
321 KOG0586 Serine/threonine prote 100.0 4E-33 8.7E-38 305.0 15.2 201 702-921 55-258 (596)
322 cd06614 STKc_PAK Catalytic dom 100.0 2.6E-32 5.6E-37 299.0 21.7 257 700-992 16-272 (286)
323 cd07833 STKc_CDKL Catalytic do 100.0 9.8E-33 2.1E-37 302.8 18.2 271 703-990 1-285 (288)
324 cd07850 STKc_JNK Catalytic dom 100.0 3E-32 6.6E-37 307.6 22.4 272 701-990 14-311 (353)
325 cd07852 STKc_MAPK15 Catalytic 100.0 1.8E-32 3.8E-37 307.6 20.4 276 701-990 5-295 (337)
326 KOG0607 MAP kinase-interacting 100.0 5.5E-33 1.2E-37 277.9 14.2 272 695-990 75-361 (463)
327 cd06607 STKc_TAO Catalytic dom 100.0 5E-32 1.1E-36 299.8 23.3 249 703-992 15-269 (307)
328 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.9E-32 6.4E-37 294.8 21.0 255 703-990 2-261 (264)
329 cd05122 PKc_STE Catalytic doma 100.0 3.6E-32 7.9E-37 291.8 21.4 251 704-990 1-251 (253)
330 cd07843 STKc_CDC2L1 Catalytic 100.0 2.3E-32 4.9E-37 300.6 20.2 271 703-990 5-290 (293)
331 cd07865 STKc_CDK9 Catalytic do 100.0 4.7E-32 1E-36 300.9 22.6 278 702-990 11-307 (310)
332 cd07836 STKc_Pho85 Catalytic d 100.0 2.4E-32 5.1E-37 299.1 19.9 270 704-990 1-281 (284)
333 cd08225 STKc_Nek5 Catalytic do 100.0 2.5E-32 5.3E-37 294.3 19.6 251 704-990 1-254 (257)
334 cd08215 STKc_Nek Catalytic dom 100.0 4.3E-32 9.3E-37 292.4 21.4 253 704-990 1-255 (258)
335 cd07838 STKc_CDK4_6_like Catal 100.0 9.4E-32 2E-36 294.9 23.9 272 705-990 1-284 (287)
336 PHA03390 pk1 serine/threonine- 100.0 4.3E-32 9.4E-37 293.6 20.7 251 696-990 7-262 (267)
337 cd08226 PK_STRAD_beta Pseudoki 100.0 2.9E-32 6.2E-37 304.6 19.9 272 709-991 4-309 (328)
338 cd07834 STKc_MAPK Catalytic do 100.0 2.3E-32 5E-37 306.0 18.9 280 704-995 1-296 (330)
339 PLN00009 cyclin-dependent kina 100.0 3.5E-32 7.7E-37 299.3 20.0 271 703-990 2-284 (294)
340 cd05633 STKc_GRK3 Catalytic do 100.0 4.1E-32 8.9E-37 295.9 20.2 244 710-991 1-256 (279)
341 PHA03210 serine/threonine kina 100.0 2.4E-32 5.2E-37 320.2 19.6 277 701-990 146-454 (501)
342 cd06627 STKc_Cdc7_like Catalyt 100.0 3.4E-32 7.4E-37 292.5 19.3 249 704-990 1-251 (254)
343 cd06606 STKc_MAPKKK Catalytic 100.0 7.6E-32 1.6E-36 290.6 21.9 255 704-990 1-257 (260)
344 cd07845 STKc_CDK10 Catalytic d 100.0 7.3E-32 1.6E-36 298.9 22.0 273 702-991 6-291 (309)
345 cd07840 STKc_CDK9_like Catalyt 100.0 5.8E-32 1.3E-36 296.5 20.9 270 705-990 1-284 (287)
346 cd06635 STKc_TAO1 Catalytic do 100.0 9.3E-32 2E-36 298.9 22.7 249 704-993 26-280 (317)
347 cd08530 STKc_CNK2-like Catalyt 100.0 5.2E-32 1.1E-36 291.5 20.1 251 704-990 1-253 (256)
348 KOG1024 Receptor-like protein 100.0 1.6E-32 3.5E-37 281.6 15.1 273 697-999 278-560 (563)
349 cd06657 STKc_PAK4 Catalytic do 100.0 3.1E-32 6.8E-37 298.6 18.5 246 708-990 25-270 (292)
350 cd07831 STKc_MOK Catalytic dom 100.0 1E-31 2.3E-36 293.7 22.4 266 705-990 1-279 (282)
351 cd05572 STKc_cGK_PKG Catalytic 100.0 7.3E-32 1.6E-36 291.5 20.9 244 711-990 1-252 (262)
352 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.1E-32 6.6E-37 306.0 18.5 276 702-990 4-300 (342)
353 cd05577 STKc_GRK Catalytic dom 100.0 4.1E-32 8.9E-37 295.9 18.8 246 711-990 1-254 (277)
354 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.5E-32 1.4E-36 301.1 20.4 269 699-990 6-288 (328)
355 cd07879 STKc_p38delta_MAPK13 C 100.0 7.1E-32 1.5E-36 303.0 20.6 275 702-996 14-305 (342)
356 KOG0690 Serine/threonine prote 100.0 5.4E-33 1.2E-37 278.2 10.1 202 702-921 167-371 (516)
357 cd07864 STKc_CDK12 Catalytic d 100.0 1.1E-31 2.4E-36 296.6 21.7 278 700-990 4-299 (302)
358 KOG1035 eIF-2alpha kinase GCN2 100.0 1.8E-32 3.9E-37 318.6 15.5 262 702-989 478-870 (1351)
359 KOG0200 Fibroblast/platelet-de 100.0 5.4E-32 1.2E-36 321.5 20.0 265 702-995 295-580 (609)
360 cd05611 STKc_Rim15_like Cataly 100.0 8.3E-32 1.8E-36 290.7 19.8 243 709-990 2-251 (260)
361 cd05118 STKc_CMGC Catalytic do 100.0 1.1E-31 2.4E-36 293.6 20.8 267 705-990 1-280 (283)
362 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-31 2.8E-36 299.9 21.5 274 704-990 1-292 (332)
363 cd08216 PK_STRAD Pseudokinase 100.0 1.1E-31 2.4E-36 298.4 20.2 265 715-991 12-296 (314)
364 KOG1006 Mitogen-activated prot 100.0 8.2E-34 1.8E-38 277.4 2.6 253 708-990 69-327 (361)
365 KOG4250 TANK binding protein k 100.0 2.1E-32 4.6E-37 303.1 13.5 211 703-924 13-230 (732)
366 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.8E-31 3.8E-36 299.8 20.4 271 701-990 13-298 (343)
367 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.7E-31 6E-36 298.4 21.6 277 696-991 10-301 (345)
368 cd07866 STKc_BUR1 Catalytic do 100.0 1.8E-31 3.9E-36 296.4 19.8 280 702-990 7-308 (311)
369 KOG4236 Serine/threonine prote 100.0 2.1E-32 4.5E-37 289.7 11.1 196 708-921 569-769 (888)
370 cd05581 STKc_PDK1 Catalytic do 100.0 1.7E-31 3.8E-36 291.6 18.9 254 703-990 1-277 (280)
371 PTZ00024 cyclin-dependent prot 100.0 1.7E-31 3.7E-36 299.5 19.2 274 703-991 8-314 (335)
372 cd05606 STKc_beta_ARK Catalyti 100.0 2.9E-31 6.3E-36 289.1 20.4 243 710-990 1-255 (278)
373 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-31 2.9E-36 300.9 17.6 271 701-990 13-298 (343)
374 cd05579 STKc_MAST_like Catalyt 100.0 2E-31 4.4E-36 288.5 18.3 247 711-989 1-253 (265)
375 cd06634 STKc_TAO2 Catalytic do 100.0 3.6E-31 7.8E-36 292.9 20.5 251 703-994 15-271 (308)
376 cd06633 STKc_TAO3 Catalytic do 100.0 5.9E-31 1.3E-35 291.7 22.1 245 705-990 23-273 (313)
377 cd08222 STKc_Nek11 Catalytic d 100.0 1.8E-31 3.9E-36 288.0 17.4 252 704-990 1-257 (260)
378 cd06618 PKc_MKK7 Catalytic dom 100.0 3.2E-31 6.9E-36 291.9 19.6 254 702-991 14-274 (296)
379 cd07830 STKc_MAK_like Catalyti 100.0 8.6E-31 1.9E-35 286.6 22.5 267 705-990 1-280 (283)
380 KOG1151 Tousled-like protein k 100.0 2E-32 4.3E-37 284.2 8.8 263 702-989 462-740 (775)
381 cd07829 STKc_CDK_like Catalyti 100.0 4.6E-31 9.9E-36 288.6 19.6 267 705-990 1-279 (282)
382 KOG0587 Traf2- and Nck-interac 100.0 3.7E-31 8E-36 298.5 18.9 266 695-990 11-282 (953)
383 KOG0669 Cyclin T-dependent kin 100.0 5.2E-33 1.1E-37 269.3 3.3 282 702-992 16-317 (376)
384 cd05583 STKc_MSK_N N-terminal 100.0 6E-31 1.3E-35 288.5 19.8 254 704-991 1-264 (288)
385 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-30 2.7E-35 286.4 21.7 253 704-990 1-268 (290)
386 KOG0662 Cyclin-dependent kinas 100.0 2.3E-31 4.9E-36 244.9 12.6 201 704-922 3-207 (292)
387 KOG0612 Rho-associated, coiled 100.0 5.7E-32 1.2E-36 311.8 10.5 208 696-920 68-283 (1317)
388 cd05610 STKc_MASTL Catalytic d 100.0 8.7E-31 1.9E-35 316.4 20.9 148 702-862 3-153 (669)
389 cd05123 STKc_AGC Catalytic dom 100.0 1.3E-30 2.9E-35 279.4 18.0 240 711-989 1-246 (250)
390 KOG0603 Ribosomal protein S6 k 100.0 5.4E-31 1.2E-35 290.0 13.7 243 701-991 320-564 (612)
391 KOG0984 Mitogen-activated prot 100.0 4.1E-31 8.9E-36 249.3 10.3 208 701-923 44-257 (282)
392 cd05576 STKc_RPK118_like Catal 100.0 3.8E-30 8.1E-35 273.2 16.3 220 714-984 4-223 (237)
393 KOG0696 Serine/threonine prote 100.0 2.1E-30 4.6E-35 267.2 11.3 205 702-924 348-556 (683)
394 PLN03225 Serine/threonine-prot 100.0 2.2E-29 4.7E-34 296.2 20.9 276 701-990 130-450 (566)
395 KOG0671 LAMMER dual specificit 100.0 2.1E-30 4.5E-35 267.5 10.0 268 702-990 88-406 (415)
396 KOG0668 Casein kinase II, alph 100.0 1.9E-29 4E-34 241.4 11.2 266 702-990 37-322 (338)
397 smart00220 S_TKc Serine/Threon 100.0 1.1E-28 2.4E-33 263.0 18.4 240 715-990 1-241 (244)
398 KOG0614 cGMP-dependent protein 100.0 4.8E-30 1E-34 271.4 7.2 252 703-992 420-679 (732)
399 PLN03224 probable serine/threo 100.0 1.8E-28 3.8E-33 280.4 20.1 275 701-990 143-500 (507)
400 KOG0695 Serine/threonine prote 100.0 4.6E-29 1E-33 250.7 12.6 202 702-921 249-454 (593)
401 KOG0608 Warts/lats-like serine 100.0 7.3E-29 1.6E-33 268.3 14.0 212 703-927 629-880 (1034)
402 KOG1027 Serine/threonine prote 100.0 2.4E-29 5.1E-34 282.7 9.1 247 707-990 513-767 (903)
403 KOG1152 Signal transduction se 100.0 6.7E-29 1.5E-33 267.0 9.0 198 702-919 560-770 (772)
404 KOG0664 Nemo-like MAPK-related 100.0 1.8E-29 4E-34 247.1 2.9 276 705-993 55-346 (449)
405 KOG1290 Serine/threonine prote 99.9 3.9E-27 8.5E-32 249.4 17.1 138 702-847 77-222 (590)
406 KOG0576 Mitogen-activated prot 99.9 9.6E-29 2.1E-33 270.3 4.7 255 702-990 14-271 (829)
407 KOG1345 Serine/threonine kinas 99.9 3.3E-27 7.1E-32 231.9 9.3 209 702-932 23-239 (378)
408 cd00180 PKc Catalytic domain o 99.9 8.2E-26 1.8E-30 235.0 20.3 212 711-991 1-215 (215)
409 KOG1167 Serine/threonine prote 99.9 8.2E-27 1.8E-31 244.7 12.3 273 700-990 33-381 (418)
410 KOG0670 U4/U6-associated splic 99.9 6.6E-27 1.4E-31 248.4 9.8 273 699-990 428-746 (752)
411 KOG4237 Extracellular matrix p 99.9 5.2E-28 1.1E-32 249.6 -1.3 407 163-598 60-498 (498)
412 KOG0665 Jun-N-terminal kinase 99.9 1.5E-26 3.4E-31 233.3 8.8 267 702-990 16-310 (369)
413 smart00221 STYKc Protein kinas 99.9 3E-25 6.5E-30 233.6 18.4 200 705-920 1-202 (225)
414 KOG1165 Casein kinase (serine/ 99.9 2.3E-23 5E-28 210.8 20.4 265 703-995 28-300 (449)
415 PLN03210 Resistant to P. syrin 99.9 1.4E-23 3E-28 268.2 23.7 364 75-478 531-904 (1153)
416 PLN03210 Resistant to P. syrin 99.9 2.1E-23 4.6E-28 266.5 21.1 312 144-476 554-878 (1153)
417 smart00750 KIND kinase non-cat 99.9 2.3E-23 5.1E-28 210.1 16.2 170 790-997 1-172 (176)
418 PRK15370 E3 ubiquitin-protein 99.9 2.3E-23 5E-28 248.1 18.6 312 32-408 60-428 (754)
419 PRK15387 E3 ubiquitin-protein 99.9 1.5E-23 3.3E-28 247.5 16.2 267 100-441 201-467 (788)
420 PRK15387 E3 ubiquitin-protein 99.9 2.8E-23 6.1E-28 245.3 15.1 269 124-491 201-469 (788)
421 KOG1164 Casein kinase (serine/ 99.9 3.5E-22 7.6E-27 221.0 21.8 267 704-997 19-300 (322)
422 PLN00181 protein SPA1-RELATED; 99.9 1.1E-23 2.5E-28 261.5 10.1 205 756-990 28-265 (793)
423 KOG1163 Casein kinase (serine/ 99.9 1.1E-22 2.4E-27 196.8 14.4 209 701-924 13-227 (341)
424 KOG4237 Extracellular matrix p 99.9 1E-24 2.2E-29 225.4 -2.2 326 275-622 52-380 (498)
425 PRK09188 serine/threonine prot 99.9 3.3E-22 7.1E-27 219.3 15.5 170 700-893 15-195 (365)
426 PRK15370 E3 ubiquitin-protein 99.9 6.7E-22 1.4E-26 235.6 12.0 262 63-360 167-428 (754)
427 KOG0195 Integrin-linked kinase 99.9 2.1E-22 4.4E-27 197.8 4.0 249 705-995 192-447 (448)
428 KOG0590 Checkpoint kinase and 99.8 2.5E-21 5.4E-26 226.8 8.4 257 706-989 321-584 (601)
429 COG0515 SPS1 Serine/threonine 99.8 2.8E-19 6.2E-24 200.6 21.3 263 705-990 2-275 (384)
430 PRK10359 lipopolysaccharide co 99.8 1.3E-19 2.8E-24 184.2 10.2 176 701-912 29-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 2.5E-19 5.5E-24 181.0 11.3 139 708-863 2-167 (190)
432 PF14531 Kinase-like: Kinase-l 99.8 1.1E-19 2.4E-24 190.4 8.3 241 703-981 12-288 (288)
433 cd05145 RIO1_like RIO kinase f 99.8 2.9E-18 6.3E-23 174.3 14.2 139 708-863 2-167 (190)
434 KOG0617 Ras suppressor protein 99.8 9.6E-21 2.1E-25 173.9 -3.6 166 391-586 29-194 (264)
435 cd00116 LRR_RI Leucine-rich re 99.8 1.9E-20 4.1E-25 208.6 -2.6 286 273-600 2-319 (319)
436 KOG0617 Ras suppressor protein 99.8 2.6E-20 5.7E-25 171.1 -1.7 180 415-624 29-212 (264)
437 cd00116 LRR_RI Leucine-rich re 99.8 7.2E-20 1.6E-24 203.9 -0.9 286 248-576 2-319 (319)
438 KOG1240 Protein kinase contain 99.8 4.5E-19 9.8E-24 205.1 5.4 249 704-991 24-292 (1431)
439 PLN03150 hypothetical protein; 99.8 3.2E-18 6.9E-23 204.2 12.5 152 32-186 369-528 (623)
440 PRK12274 serine/threonine prot 99.7 7.7E-18 1.7E-22 167.1 12.7 189 706-920 5-209 (218)
441 KOG1166 Mitotic checkpoint ser 99.7 7.2E-18 1.6E-22 200.5 13.6 200 700-917 695-902 (974)
442 PRK10345 hypothetical protein; 99.7 4.9E-17 1.1E-21 165.6 14.8 139 706-860 5-156 (210)
443 KOG4158 BRPK/PTEN-induced prot 99.7 2.5E-17 5.4E-22 170.9 12.1 203 758-989 274-509 (598)
444 KOG1023 Natriuretic peptide re 99.7 2.8E-17 6E-22 183.2 13.2 217 754-997 1-227 (484)
445 KOG0603 Ribosomal protein S6 k 99.7 3.2E-18 6.9E-23 189.7 3.6 187 710-920 1-193 (612)
446 smart00090 RIO RIO-like kinase 99.7 1.1E-16 2.3E-21 167.6 12.4 144 702-863 27-198 (237)
447 KOG1033 eIF-2alpha kinase PEK/ 99.6 1.4E-16 3E-21 173.5 5.9 129 777-913 328-457 (516)
448 PRK14879 serine/threonine prot 99.6 2.8E-15 6.2E-20 155.9 13.3 134 709-862 2-143 (211)
449 cd05144 RIO2_C RIO kinase fami 99.6 2.8E-15 6E-20 153.9 12.7 142 698-863 10-175 (198)
450 PRK09605 bifunctional UGMP fam 99.6 3.1E-15 6.7E-20 177.1 13.2 138 701-862 331-476 (535)
451 KOG0606 Microtubule-associated 99.6 2E-15 4.2E-20 175.6 8.0 172 702-923 82-263 (1205)
452 TIGR03724 arch_bud32 Kae1-asso 99.6 1E-14 2.2E-19 150.2 11.5 130 710-862 1-138 (199)
453 PLN03150 hypothetical protein; 99.5 1.8E-14 3.8E-19 172.3 10.5 152 517-674 419-572 (623)
454 KOG0532 Leucine-rich repeat (L 99.5 1.2E-15 2.5E-20 165.8 -1.4 190 398-598 78-270 (722)
455 cd05119 RIO RIO kinase family, 99.5 8.4E-14 1.8E-18 141.7 11.6 135 708-863 2-164 (187)
456 KOG0532 Leucine-rich repeat (L 99.5 2.5E-15 5.5E-20 163.2 -1.1 215 321-575 54-271 (722)
457 cd05120 APH_ChoK_like Aminogly 99.5 2E-13 4.4E-18 133.7 12.4 135 707-862 2-138 (155)
458 KOG0590 Checkpoint kinase and 99.5 4.1E-15 9E-20 174.6 -0.3 258 702-989 19-285 (601)
459 PRK01723 3-deoxy-D-manno-octul 99.5 5.8E-13 1.3E-17 139.8 14.1 139 708-862 36-191 (239)
460 KOG1266 Protein kinase [Signal 99.4 4.9E-13 1.1E-17 136.3 6.5 210 755-991 122-332 (458)
461 COG4886 Leucine-rich repeat (L 99.4 6.9E-13 1.5E-17 152.1 8.2 198 128-365 97-295 (394)
462 COG4886 Leucine-rich repeat (L 99.3 8.5E-13 1.8E-17 151.3 6.4 182 392-606 113-295 (394)
463 TIGR01982 UbiB 2-polyprenylphe 99.3 6E-11 1.3E-15 135.6 19.3 141 708-863 122-307 (437)
464 KOG0601 Cyclin-dependent kinas 99.3 4.8E-12 1E-16 141.4 6.9 203 704-920 115-329 (524)
465 KOG1243 Protein kinase [Genera 99.2 9.6E-11 2.1E-15 131.9 14.4 172 721-916 30-201 (690)
466 PRK04750 ubiB putative ubiquin 99.2 3E-10 6.6E-15 130.9 18.0 145 703-863 120-314 (537)
467 COG4248 Uncharacterized protei 99.2 3.7E-10 8E-15 119.5 16.5 279 706-1000 14-306 (637)
468 KOG1909 Ran GTPase-activating 99.2 6.6E-13 1.4E-17 137.1 -4.3 95 312-408 180-283 (382)
469 KOG1259 Nischarin, modulator o 99.2 4.3E-12 9.3E-17 127.6 1.5 132 443-605 284-416 (490)
470 cd05146 RIO3_euk RIO kinase fa 99.2 4E-10 8.6E-15 112.6 13.4 137 708-863 2-174 (197)
471 KOG3207 Beta-tubulin folding c 99.1 6.2E-12 1.3E-16 133.4 -0.6 194 217-433 142-340 (505)
472 KOG3207 Beta-tubulin folding c 99.1 1.1E-11 2.3E-16 131.6 0.3 167 194-360 143-314 (505)
473 cd05151 ChoK Choline Kinase (C 99.1 1.7E-10 3.6E-15 115.4 8.5 130 708-861 3-135 (170)
474 KOG1909 Ran GTPase-activating 99.1 5.5E-12 1.2E-16 130.4 -2.9 140 441-601 155-311 (382)
475 PF08263 LRRNT_2: Leucine rich 99.1 9.9E-11 2.1E-15 85.9 4.0 39 34-72 2-43 (43)
476 KOG1259 Nischarin, modulator o 99.1 2.9E-11 6.2E-16 121.7 0.8 134 288-457 279-413 (490)
477 KOG0531 Protein phosphatase 1, 99.1 2.3E-11 5E-16 139.5 0.2 82 518-602 234-319 (414)
478 KOG0531 Protein phosphatase 1, 99.1 3.3E-11 7.1E-16 138.2 0.9 246 268-581 71-322 (414)
479 PF14580 LRR_9: Leucine-rich r 99.0 1.3E-10 2.9E-15 113.6 3.9 79 515-594 63-146 (175)
480 PF14580 LRR_9: Leucine-rich r 99.0 5.1E-10 1.1E-14 109.5 5.1 106 292-408 18-126 (175)
481 KOG4658 Apoptotic ATPase [Sign 99.0 3.3E-10 7.2E-15 138.2 4.8 86 144-231 567-652 (889)
482 COG3642 Mn2+-dependent serine/ 98.9 1.2E-08 2.7E-13 97.7 11.6 128 709-861 2-139 (204)
483 KOG0601 Cyclin-dependent kinas 98.9 1.6E-09 3.6E-14 121.4 6.2 251 701-995 263-519 (524)
484 KOG0606 Microtubule-associated 98.9 7.5E-10 1.6E-14 129.9 3.1 208 702-922 803-1039(1205)
485 KOG4658 Apoptotic ATPase [Sign 98.9 1.2E-09 2.7E-14 133.3 4.5 320 122-477 521-856 (889)
486 cd05154 ACAD10_11_like Acyl-Co 98.9 1.6E-08 3.4E-13 106.1 12.3 145 709-862 4-206 (223)
487 KOG3087 Serine/threonine prote 98.9 2.6E-08 5.6E-13 94.7 11.8 142 707-861 11-164 (229)
488 KOG3741 Poly(A) ribonuclease s 98.8 1.4E-07 3E-12 103.3 17.3 177 715-917 288-475 (655)
489 PF13855 LRR_8: Leucine rich r 98.8 5.6E-09 1.2E-13 83.9 3.9 60 541-600 2-61 (61)
490 COG0478 RIO-like serine/threon 98.7 6.7E-08 1.5E-12 98.3 10.1 134 704-860 92-249 (304)
491 PF13855 LRR_8: Leucine rich r 98.7 1.5E-08 3.2E-13 81.5 4.4 59 396-454 2-60 (61)
492 KOG4579 Leucine-rich repeat (L 98.7 1.9E-09 4.2E-14 96.6 -1.7 91 514-607 75-165 (177)
493 PRK15123 lipopolysaccharide co 98.7 4.4E-07 9.4E-12 96.4 15.5 145 709-861 28-193 (268)
494 PF01163 RIO1: RIO1 family; I 98.7 1.4E-07 3.1E-12 94.1 11.0 124 718-862 1-155 (188)
495 KOG1859 Leucine-rich repeat pr 98.6 9.4E-10 2E-14 123.4 -6.5 89 511-603 204-294 (1096)
496 KOG1859 Leucine-rich repeat pr 98.5 2.7E-09 5.9E-14 119.8 -6.7 128 173-330 164-292 (1096)
497 KOG4579 Leucine-rich repeat (L 98.5 9E-09 2E-13 92.4 -2.5 113 471-587 57-169 (177)
498 PRK09902 hypothetical protein; 98.4 5.4E-06 1.2E-10 83.0 14.0 143 711-862 26-179 (216)
499 KOG2982 Uncharacterized conser 98.4 1.2E-07 2.6E-12 96.2 2.3 57 242-306 180-237 (418)
500 KOG2982 Uncharacterized conser 98.4 8.4E-08 1.8E-12 97.3 1.1 209 372-602 46-263 (418)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-116 Score=1124.87 Aligned_cols=921 Identities=30% Similarity=0.513 Sum_probs=777.5
Q ss_pred CCHhHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeeEEeCCCCCcEEEEEeecCCCCcccCccccCCCCCcEEEcCCCC
Q 001858 32 SNETDRVALLAIKSQLQDPMGITSSWNNSINVCQWTGVTCGQRHPRVIQLYLRNQSVGGFLSPYVGNLSFLRFINLASNN 111 (1003)
Q Consensus 32 ~~~~~~~al~~~k~~~~d~~~~~~sW~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~~~g~~~~~l~~l~~L~~L~L~~n~ 111 (1003)
..+.|++||++||+++.||.+.+++|+...+||.|+||+|++ .++|+.|+|++++++|.+++.+..+++|++|+|++|+
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQ 104 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCc
Confidence 357899999999999999988899998778999999999986 4699999999999999999999999999999999999
Q ss_pred CCCCCchhhc-ccccCcEEEecccccccccCccCcCCCCCceeecccccccCCCCccccccccccceEEccCcccccccC
Q 001858 112 LHGEIPNELG-RLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLNVAENQLTGQLP 190 (1003)
Q Consensus 112 ~~g~ip~~l~-~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip 190 (1003)
++|.+|..+. .+++|++|+|++|.++|.+|. +.+++|++|+|++|.+++.+|..++.+ ++|++|+|++|.+++.+|
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p 181 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSF-SSLKVLDLGGNVLVGKIP 181 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcC-CCCCEEECccCcccccCC
Confidence 9999999876 999999999999999999986 568999999999999999999998775 899999999999999999
Q ss_pred CCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCC-cccCCchhHHhhcccccCCCCCcccccCcc
Q 001858 191 PSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPP-IFNISSLEQISLLTNRFEGRLPLNIGFNLP 269 (1003)
Q Consensus 191 ~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~ 269 (1003)
..++++++|++|++++|++.+.+|..++++++|++|+|++|++++.+|. +.++++|++|++++|++.+.+|..+. +++
T Consensus 182 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~ 260 (968)
T PLN00113 182 NSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG-NLK 260 (968)
T ss_pred hhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh-CCC
Confidence 9999999999999999999999999999999999999999999987764 78899999999999999999998876 899
Q ss_pred ccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCC
Q 001858 270 KLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKL 349 (1003)
Q Consensus 270 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 349 (1003)
+|++|++++|++++.+|..+.++++|++|+|++|.+.+..|..+..+++|++|++++|.+.... +..+..+++|
T Consensus 261 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~------~~~~~~l~~L 334 (968)
T PLN00113 261 NLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKI------PVALTSLPRL 334 (968)
T ss_pred CCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcC------ChhHhcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999987532 2357789999
Q ss_pred cEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCccccccccceeccccc
Q 001858 350 ETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSAN 429 (1003)
Q Consensus 350 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 429 (1003)
+.|++++|++.+.+|..++.+.+|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|
T Consensus 335 ~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n 414 (968)
T PLN00113 335 QVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414 (968)
T ss_pred CEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCccceeecccccccccCCccccCCCCCCeeeccCccccCCCchhhhhhccccccccCCCCccccccc
Q 001858 430 NLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIP 509 (1003)
Q Consensus 430 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p 509 (1003)
++++..|..|..+++|+.|++++|.+++.+|..+..+++|+.|++++|++.+.+|..+. . ..++.|++++|++++.+|
T Consensus 415 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~-~~L~~L~ls~n~l~~~~~ 492 (968)
T PLN00113 415 SFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-S-KRLENLDLSRNQFSGAVP 492 (968)
T ss_pred EeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-c-ccceEEECcCCccCCccC
Confidence 99999999999999999999999999999999999999999999999999988887653 2 345678999999999999
Q ss_pred cccccccccccccccccccccccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCCcccccCCCc
Q 001858 510 LVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSF 589 (1003)
Q Consensus 510 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 589 (1003)
..+..+++|+.|+|++|++++.+|..+..+++|++|+|++|++++.+|..|..+++|+.|||++|++++.+|..+..+++
T Consensus 493 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 572 (968)
T PLN00113 493 RKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVES 572 (968)
T ss_pred hhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEecCCCcccccCCCCCccCCCcceeeccCCCccCCCCCCCCCCCCCCCCCccccceeEeehhHHHHHHHHhhh-eee
Q 001858 590 LEYLNLSYNDFEGQVPTKGVFSNKTRISLIENGKLCGGLDELHLPACHNTRPRKAKITILKVLIPVIVLLTILSVG-LIV 668 (1003)
Q Consensus 590 L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~l~~~-~~~ 668 (1003)
|++|++++|+++|.+|..++|..+....+.||+.+|++......++|...+.. ..+.+.+++++++++++++++ +++
T Consensus 573 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (968)
T PLN00113 573 LVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKT--PSWWFYITCTLGAFLVLALVAFGFV 650 (968)
T ss_pred cCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccccc--ceeeeehhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997765556677543222 112222222222222222222 222
Q ss_pred EEEeeccccccccchhh--cccC-C--CcccHHHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccc
Q 001858 669 VCTRRRKQTQKSSTLLS--MEQQ-F--PMVSYAELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS 743 (1003)
Q Consensus 669 ~~~rrrk~~~~~~~~~~--~~~~-~--~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~ 743 (1003)
++++++....+...... .+.. . ..............|...+.||+|+||+||+|++..+++.||||.++.....
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~- 729 (968)
T PLN00113 651 FIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI- 729 (968)
T ss_pred HHHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-
Confidence 22222211111100000 0000 0 0001112223345677889999999999999999889999999998633221
Q ss_pred hHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHH
Q 001858 744 IKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAI 823 (1003)
Q Consensus 744 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l 823 (1003)
..+|++.+++++||||++++++|. ++...++||||+++|+|.++++. ++|.++.+++.|+++|+
T Consensus 730 ---~~~~~~~l~~l~HpnIv~~~~~~~-----~~~~~~lv~Ey~~~g~L~~~l~~--------l~~~~~~~i~~~ia~~L 793 (968)
T PLN00113 730 ---PSSEIADMGKLQHPNIVKLIGLCR-----SEKGAYLIHEYIEGKNLSEVLRN--------LSWERRRKIAIGIAKAL 793 (968)
T ss_pred ---cHHHHHHHhhCCCCCcceEEEEEE-----cCCCCEEEEeCCCCCcHHHHHhc--------CCHHHHHHHHHHHHHHH
Confidence 235688999999999999999974 34567999999999999999953 78999999999999999
Q ss_pred HHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchh
Q 001858 824 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYS 903 (1003)
Q Consensus 824 ~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvws 903 (1003)
+|||..+.++|+||||||+||+++.++..++. ||.+..... .....||+.|+|||++.+..++.++||||
T Consensus 794 ~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S 863 (968)
T PLN00113 794 RFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---------DTKCFISSAYVAPETRETKDITEKSDIYG 863 (968)
T ss_pred HHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc---------CCCccccccccCcccccCCCCCcccchhh
Confidence 99997766799999999999999999888875 555533211 11235789999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh-HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC
Q 001858 904 FGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK-VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI 982 (1003)
Q Consensus 904 lG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP 982 (1003)
|||++|||++|+.||............|.+...... ....+++.+.... ....+...++.+++.+||+.+|++||
T Consensus 864 ~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~Cl~~~P~~RP 939 (968)
T PLN00113 864 FGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV----SVNQNEIVEVMNLALHCTATDPTARP 939 (968)
T ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC----CccHHHHHHHHHHHHhhCcCCchhCc
Confidence 999999999999999654444444444444332221 2222332222111 11233456788999999999999999
Q ss_pred CHHHHHHHHHHHHhhh
Q 001858 983 HMADAVKNLCAAREKY 998 (1003)
Q Consensus 983 s~~ev~~~L~~~~~~~ 998 (1003)
+|+|+++.|+++.+..
T Consensus 940 t~~evl~~L~~~~~~~ 955 (968)
T PLN00113 940 CANDVLKTLESASRSS 955 (968)
T ss_pred CHHHHHHHHHHhhccc
Confidence 9999999999886643
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.1e-61 Score=613.92 Aligned_cols=516 Identities=35% Similarity=0.536 Sum_probs=482.2
Q ss_pred CCCCcEEEcCCCCCCCCCchhhcccccCcEEEecccccccccCccCc-CCCCCceeecccccccCCCCccccccccccce
Q 001858 99 LSFLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPSNLS-HCSNLINFSVRRNNLTGEIPAYIGYYWLKLEN 177 (1003)
Q Consensus 99 l~~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~-~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~ 177 (1003)
..+++.|||++|+++|.+|..+..+++|++|+|++|.++|.+|..+. .+++|++|+|++|+++|.+|... +++|++
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~---l~~L~~ 144 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS---IPNLET 144 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccc---cCCCCE
Confidence 35799999999999999999999999999999999999999999876 99999999999999999999743 479999
Q ss_pred EEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCC-cccCCchhHHhhccccc
Q 001858 178 LNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPP-IFNISSLEQISLLTNRF 256 (1003)
Q Consensus 178 L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l 256 (1003)
|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|.+.+.+|. +.++.+|+.|+++.|++
T Consensus 145 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred EECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999987664 77899999999999999
Q ss_pred CCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCC
Q 001858 257 EGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGD 336 (1003)
Q Consensus 257 ~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 336 (1003)
.+.+|..+. ++++|++|++++|++++.+|..|+++++|++|+|++|++++..|..+..+++|++|++++|.+....
T Consensus 225 ~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~--- 300 (968)
T PLN00113 225 SGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI--- 300 (968)
T ss_pred CCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC---
Confidence 999999887 8999999999999999999999999999999999999999999999999999999999999986532
Q ss_pred hhhHhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCccc
Q 001858 337 LDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIG 416 (1003)
Q Consensus 337 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 416 (1003)
+..+.++++|++|++++|.+.+..|..+..+++|+.|++++|.+++.+|..++.+++|+.|++++|++++.+|..+.
T Consensus 301 ---p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 301 ---PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred ---ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh
Confidence 24567899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCCeeeccCccccCCCchhhhhhcccccc
Q 001858 417 ELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLSSL 496 (1003)
Q Consensus 417 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~ 496 (1003)
.+++|+.|++++|++.+.+|..+..+++|+.|+|++|++++.+|..+.++++|+.|++++|++++.+|..+..+.++ +.
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~ 456 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSL-QM 456 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCC-cE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887776665 56
Q ss_pred ccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCcee
Q 001858 497 LDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNL 576 (1003)
Q Consensus 497 l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 576 (1003)
+++++|.+.+.+|..+ ..++|+.||+++|++++.+|..+..+++|+.|+|++|++++.+|..+.++++|++|+|++|++
T Consensus 457 L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 535 (968)
T PLN00113 457 LSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535 (968)
T ss_pred EECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcc
Confidence 7999999999998866 458999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccCCCccceEecCCCcccccCCCC-CccCCCcceeeccCCCccC
Q 001858 577 SGQIPEYLEDLSFLEYLNLSYNDFEGQVPTK-GVFSNKTRISLIENGKLCG 626 (1003)
Q Consensus 577 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~ 626 (1003)
++.+|..+..+++|+.|+|++|+++|.+|.. ..+..+..+.+.+|+..+.
T Consensus 536 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 536 SGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586 (968)
T ss_pred cccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceee
Confidence 9999999999999999999999999988863 3455677788888887653
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=407.46 Aligned_cols=291 Identities=41% Similarity=0.635 Sum_probs=237.9
Q ss_pred CCCcccHHHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeee
Q 001858 689 QFPMVSYAELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITV 768 (1003)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 768 (1003)
....|+++++..+|++|+..+.||+|+||.||+|...+ ++.||||++........++|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 45679999999999999999999999999999999974 48899998875443314569999999999999999999999
Q ss_pred eeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC
Q 001858 769 CSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH 848 (1003)
Q Consensus 769 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~ 848 (1003)
|.+. ++..++|||||++|+|.+++...... .++|.+|++||.++|+||+|||+.+.+.||||||||+|||+|+
T Consensus 140 C~e~----~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 140 CLEG----GEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred EecC----CceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 8542 22589999999999999999885422 7899999999999999999999999889999999999999999
Q ss_pred CCCeEEcccccccccccCCccccCcccccc-cccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCccc-CCcc
Q 001858 849 DMVAHVSDFGLAKFLFDRPIQETSSSSIGI-KGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMF-NDGL 926 (1003)
Q Consensus 849 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~-~~~~ 926 (1003)
++++||+|||+|+..... ....... .||.+|+|||+...+..+.|+||||||++++|+++|+.|.+... ..+.
T Consensus 213 ~~~aKlsDFGLa~~~~~~-----~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~ 287 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEG-----DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGEL 287 (361)
T ss_pred CCCEEccCccCcccCCcc-----ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccc
Confidence 999999999999654220 1111111 79999999999999999999999999999999999999887643 3344
Q ss_pred hhhHHHHhhCch-hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 927 TLHGFVKMALPE-KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 927 ~~~~~~~~~~~~-~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
.+..|....+.+ ++.+++|+.+.... .. ..+...++..++.+|++.+|.+||+|.||++.|+.+..
T Consensus 288 ~l~~w~~~~~~~~~~~eiiD~~l~~~~---~~-~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 288 SLVEWAKPLLEEGKLREIVDPRLKEGE---YP-DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred cHHHHHHHHHHCcchhheeCCCccCCC---CC-hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 466666554444 46677776654211 11 11556779999999999999999999999999965543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-45 Score=380.02 Aligned_cols=256 Identities=25% Similarity=0.340 Sum_probs=215.4
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC-ceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD-FKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~-~~~ 781 (1003)
+.+..+.||+|..|+||+++|+.+++.+|+|++.... +...+++.+|++++++.+||+||+++|.+ ..+. ...
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF-----~~~~~~is 154 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAF-----YSNGEEIS 154 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEE-----EeCCceEE
Confidence 4556789999999999999999999999999996443 44468899999999999999999999995 3445 589
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||++|+|++++.. .+.+++...-+++.+|++||.|||+ + +||||||||+|||+...|.+||||||.+
T Consensus 155 I~mEYMDgGSLd~~~k~-----~g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKR-----VGRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred eehhhcCCCCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEecccccc
Confidence 99999999999999987 4679999999999999999999996 6 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
..+... ....++||..|||||.+.+..|+.++||||||++++|+.+|++||...... +..+
T Consensus 227 ~~lvnS-------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~------------~~~~ 287 (364)
T KOG0581|consen 227 GILVNS-------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP------------YLDI 287 (364)
T ss_pred HHhhhh-------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC------------CCCH
Confidence 876432 334588999999999999999999999999999999999999998764111 1223
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+.++......|. +.+.. .+.+++..++-.|++.+|++||++.|+++|=.-
T Consensus 288 ~~Ll~~Iv~~ppP-~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 288 FELLCAIVDEPPP-RLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred HHHHHHHhcCCCC-CCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHH
Confidence 4445544443332 22221 578889999999999999999999999987443
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.9e-49 Score=404.81 Aligned_cols=476 Identities=29% Similarity=0.440 Sum_probs=327.1
Q ss_pred EEEEEeecCCCCcccCccccCCCCCcEEEcCCCCCCCCCchhhcccccCcEEEecccccccccCccCcCCCCCceeeccc
Q 001858 78 VIQLYLRNQSVGGFLSPYVGNLSFLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRR 157 (1003)
Q Consensus 78 v~~l~l~~~~~~g~~~~~l~~l~~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~ 157 (1003)
...+.+.+|.+. .+.+.+.+|..|.+|++++|+++ +.|+++|++..++.|+.|+|+++ .+|++++.+.+|+.|++++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 345566666665 46677888888888888888888 78888888888888888888888 7888888888888888888
Q ss_pred ccccCCCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCC
Q 001858 158 NNLTGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGML 237 (1003)
Q Consensus 158 N~l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 237 (1003)
|.+. ++|+.++.. ..|+.|+..+|+++ .+|+.++++.+|..|++.+|+++. .|+..-+++.|+.||...|-++..+
T Consensus 124 n~~~-el~~~i~~~-~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~tlP 199 (565)
T KOG0472|consen 124 NELK-ELPDSIGRL-LDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLETLP 199 (565)
T ss_pred ccee-ecCchHHHH-hhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhhcCC
Confidence 8887 777777765 57777888888877 677777778888888888888774 4444444777888888888777777
Q ss_pred CCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCcCccc-cccccchhhhccCccccCccCcccCCC
Q 001858 238 PPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSF-SNASNLVILNLSGNHFSGKVGIDFSSL 316 (1003)
Q Consensus 238 ~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~~~l 316 (1003)
|.++.+.+|+.|++..|++. .+| ++. .+..|++|+++.|+|. .+|... .+++++.+|||..|++. ..|+.+.-+
T Consensus 200 ~~lg~l~~L~~LyL~~Nki~-~lP-ef~-gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 200 PELGGLESLELLYLRRNKIR-FLP-EFP-GCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred hhhcchhhhHHHHhhhcccc-cCC-CCC-ccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 77777777777777777776 566 333 5666777777777776 444433 36667777777777766 445556666
Q ss_pred CcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccccccc--ccccccc--cccccc---C----
Q 001858 317 PNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLS--TITIIAM--GLNQIS---G---- 385 (1003)
Q Consensus 317 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L--~~n~l~---~---- 385 (1003)
.+|++||+++|.|+..+. .++++ +|+.|.+.+|.+..+-.+.+..-+ -|++|.- ..-.++ +
T Consensus 275 rsL~rLDlSNN~is~Lp~-------sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~ 346 (565)
T KOG0472|consen 275 RSLERLDLSNNDISSLPY-------SLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTET 346 (565)
T ss_pred hhhhhhcccCCccccCCc-------ccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccc
Confidence 667777777776665543 35555 666666666666532111111111 1222211 000010 0
Q ss_pred ------cccccccCCCCccEEEcccccccccCCCccccccc---cceeccccccccccccccccCCCccce-eecccccc
Q 001858 386 ------TIPLEIRNLANIYALGLEYNQLTGTIPYTIGELIN---LQALDFSANNLHGIIPDSIGNLSTLNS-LWLGFNNL 455 (1003)
Q Consensus 386 ------~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~---L~~L~Ls~N~l~~~~~~~~~~l~~L~~-L~L~~N~l 455 (1003)
........+.+.+.|++++-+++ .+|+....... .+..+++.|++. .+|..+..+..+.+ +.+++|.+
T Consensus 347 ~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i 424 (565)
T KOG0472|consen 347 AMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI 424 (565)
T ss_pred cCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc
Confidence 00112233455666666666666 45554444333 566666666666 45655555544433 33444444
Q ss_pred cccCCccccCCCCCCeeeccCccccCCCchhhhhhccccccccCCCCccccccccccccccccccccccccccccccCcc
Q 001858 456 QGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTT 535 (1003)
Q Consensus 456 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 535 (1003)
+ .+|..++.+++|..|+|++|.+. .+|.+++.+..|+.||+|.|+|. .+|..
T Consensus 425 s-fv~~~l~~l~kLt~L~L~NN~Ln--------------------------~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~ 476 (565)
T KOG0472|consen 425 S-FVPLELSQLQKLTFLDLSNNLLN--------------------------DLPEEMGSLVRLQTLNLSFNRFR-MLPEC 476 (565)
T ss_pred c-cchHHHHhhhcceeeecccchhh--------------------------hcchhhhhhhhhheecccccccc-cchHH
Confidence 4 66666666666666666666665 45555777778999999999997 89999
Q ss_pred ccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCCcccccCCCccceEecCCCcccccCC
Q 001858 536 LSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYLNLSYNDFEGQVP 605 (1003)
Q Consensus 536 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 605 (1003)
+..+..|+.+-.++|++....|+.+.+|.+|..|||.+|.|. .+|+.+++|++|++|+++||+|. .++
T Consensus 477 ~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr 544 (565)
T KOG0472|consen 477 LYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPR 544 (565)
T ss_pred HhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCH
Confidence 988889999999999998777777999999999999999998 78889999999999999999998 444
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1e-47 Score=394.35 Aligned_cols=476 Identities=28% Similarity=0.382 Sum_probs=352.7
Q ss_pred CCcEEEcCCCCCCCCCchhhcccccCcEEEecccccccccCccCcCCCCCceeecccccccCCCCccccccccccceEEc
Q 001858 101 FLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLNV 180 (1003)
Q Consensus 101 ~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~L 180 (1003)
.|+.|++++|.+. .+-+.+.++..|++|++++|+++ ++|++++.+.+++.|+.++|+++
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls------------------- 104 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS------------------- 104 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-------------------
Confidence 4555666666665 45555666666666666666666 56666666666666666666555
Q ss_pred cCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCCcccCCchhHHhhcccccCCCC
Q 001858 181 AENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFNISSLEQISLLTNRFEGRL 260 (1003)
Q Consensus 181 ~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~l 260 (1003)
.+|+.++.+.+|+.|++++|++. .+|++++.+..|+.|+..+|+++..++..+++.+|..+++.+|++. .+
T Consensus 105 -------~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~-~l 175 (565)
T KOG0472|consen 105 -------ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLK-AL 175 (565)
T ss_pred -------hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchh-hC
Confidence 55555666666666666666666 5666666666666666666666666666666666666777777666 44
Q ss_pred CcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhH
Q 001858 261 PLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFI 340 (1003)
Q Consensus 261 p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 340 (1003)
|.+.- +++.|++|++.+|-++ .+|..++.+.+|+.|+|..|+|...+ .|.++..|++|+++.|+|+.++.
T Consensus 176 ~~~~i-~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lP--ef~gcs~L~Elh~g~N~i~~lpa------ 245 (565)
T KOG0472|consen 176 PENHI-AMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLP--EFPGCSLLKELHVGENQIEMLPA------ 245 (565)
T ss_pred CHHHH-HHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCC--CCCccHHHHHHHhcccHHHhhHH------
Confidence 44443 3677777777777776 66777777777777777777777443 67777777778888777766543
Q ss_pred hhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCcccccc-
Q 001858 341 TLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELI- 419 (1003)
Q Consensus 341 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~- 419 (1003)
.....+++|.+|||.+|+++ ..|..++.+.+|..||+++|.|+ .+|..++++ .|+.|-+.+|.+..+-.+-+..-+
T Consensus 246 e~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~ 322 (565)
T KOG0472|consen 246 EHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQ 322 (565)
T ss_pred HHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHH
Confidence 24557788888888888887 67888888888888888888888 567788888 888888888888732222222111
Q ss_pred -ccceecc-------cccccc----cc-cc---ccccCCCccceeecccccccccCCccccCCCC---CCeeeccCcccc
Q 001858 420 -NLQALDF-------SANNLH----GI-IP---DSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKN---LMLLNVSKNKLT 480 (1003)
Q Consensus 420 -~L~~L~L-------s~N~l~----~~-~~---~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~ls~N~l~ 480 (1003)
-|++|.= +.-.=. .. .+ .....+.+.+.|+++.-+++ .+|.....-.. .+..+++.|++.
T Consensus 323 ~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~ 401 (565)
T KOG0472|consen 323 EVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC 401 (565)
T ss_pred HHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh
Confidence 1333321 111000 00 11 12234567899999999999 67765544333 788999999998
Q ss_pred CCCchhhhhhccccccccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCCCccccCCccc
Q 001858 481 GTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSL 560 (1003)
Q Consensus 481 ~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 560 (1003)
++|..+..+..+.+.+.+++|.++ -+|..++.+++|..|+|++|-+. .+|.+++.+..|+.|+++.|+|. .+|..+
T Consensus 402 -elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~ 477 (565)
T KOG0472|consen 402 -ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECL 477 (565)
T ss_pred -hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHH
Confidence 999999999999999999999887 78888999999999999999997 89999999999999999999998 899999
Q ss_pred ccccCcCeeeccCceeccCCcccccCCCccceEecCCCcccccCCCCCccCCCcceeeccCCCc
Q 001858 561 ISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYLNLSYNDFEGQVPTKGVFSNKTRISLIENGKL 624 (1003)
Q Consensus 561 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 624 (1003)
..+..|+.+-.++|++....|..+.+|.+|.+|||.+|.+...+|..+...+++.+-+.|||+-
T Consensus 478 y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 478 YELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 9999999999999999977777799999999999999999998888899999999999999873
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-44 Score=372.13 Aligned_cols=256 Identities=26% Similarity=0.367 Sum_probs=211.2
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc-------chHHHHHHHHHHHhcCCCCceeEeeeeeeccc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG-------SIKSFVAECEALKNIRHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 774 (1003)
.+.|.+.+.||.|+||.|-+|..+.+++.||||+++..... ......+|+++|++++|||||++.++ +
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~-----f 245 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF-----F 245 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee-----e
Confidence 45688899999999999999999999999999999744211 22345799999999999999999999 5
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC---CC
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MV 851 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~ 851 (1003)
..+++.|+||||++||+|.+++-. .+.+.+.....+++|++.|+.|||++ ||+||||||+|||+..+ ..
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv~-----nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~l 317 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVVA-----NKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCL 317 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHHh-----ccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceE
Confidence 667788999999999999999987 45778888899999999999999999 99999999999999866 68
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCCCCC---CccccchhHHHHHHHHHhCCCCCCcccCCcchh
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNV---SLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTL 928 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~ 928 (1003)
+||+|||+|+... ........+||+.|.|||++.++.+ ..++|+||+||++|-+++|.+||++...+..
T Consensus 318 lKItDFGlAK~~g------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-- 389 (475)
T KOG0615|consen 318 LKITDFGLAKVSG------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-- 389 (475)
T ss_pred EEecccchhhccc------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc--
Confidence 9999999998763 3445566899999999999887643 3478999999999999999999987543311
Q ss_pred hHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 929 HGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+.+.+ ........++.+.+..++...++.+++..||++||++.|+++|=+
T Consensus 390 -----------l~eQI---~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 390 -----------LKEQI---LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred -----------HHHHH---hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 12222 222233334556667788889999999999999999999998643
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-44 Score=371.49 Aligned_cols=261 Identities=28% Similarity=0.470 Sum_probs=206.2
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.++|.+.+.||+|+||+||+|+++.++..||||.+... .....+.+..|++++++++|||||++++++ ..+++
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDDDF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecCCe
Confidence 46899999999999999999999999999999999755 455567889999999999999999999995 55778
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC------CCeE
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD------MVAH 853 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~------~~~k 853 (1003)
.++|||||.||+|.+|+++ .+.+++..++.++.|+|.|+++||++ +||||||||+|||++.. -.+|
T Consensus 84 i~lVMEyC~gGDLs~yi~~-----~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRR-----RGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred EEEEEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEE
Confidence 8999999999999999998 55899999999999999999999999 99999999999999865 4589
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchh-----
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTL----- 928 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~----- 928 (1003)
|+|||+|+.+.++. .....+|++-|||||++..++|+.|+|+||+|+++|||++|+.||......+.-.
T Consensus 156 IADFGfAR~L~~~~------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~ 229 (429)
T KOG0595|consen 156 IADFGFARFLQPGS------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG 229 (429)
T ss_pred ecccchhhhCCchh------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc
Confidence 99999999885433 2334789999999999999999999999999999999999999998644332211
Q ss_pred ---hHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 001858 929 ---HGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAV 988 (1003)
Q Consensus 929 ---~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~ 988 (1003)
....+........+..-..+..++..+..... .+....+..+|.+|+.+.++-
T Consensus 230 ~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~-------~~~~~~l~~~p~~~~~~~~~~ 285 (429)
T KOG0595|consen 230 NEIVPVLPAELSNPLRELLISLLQRNPKDRISFED-------FFDHPFLAANPQDRADAFELE 285 (429)
T ss_pred ccccCchhhhccCchhhhhhHHHhcCccccCchHH-------hhhhhhcccCcccccCccccc
Confidence 11111222333334444445554433333322 223344455677777665543
No 9
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-43 Score=384.84 Aligned_cols=262 Identities=31% Similarity=0.463 Sum_probs=212.8
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccc--hHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS--IKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+..+.+.+|+|+||+||+|.+.++. .||||++....... .+.|.+|+.++++++|||||+++|+|... ....+
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~----~~~~~ 116 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP----PGSLC 116 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CCceE
Confidence 3444566999999999999997442 29999997543222 56999999999999999999999998542 22679
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-cEeccCCCCceEeCCCC-CeEEccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPP-IVHGDLKPSNVLLDHDM-VAHVSDFGL 859 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dikp~Nill~~~~-~~kl~DfG~ 859 (1003)
+||||+++|+|.++++... .+.+++..+.+++.|||+||+|||++ + |||||+||+|||++.++ ++||+|||+
T Consensus 117 iVtEy~~~GsL~~~l~~~~---~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKR---KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred EEEEeCCCCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 9999999999999998852 56899999999999999999999999 7 99999999999999997 999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccC--CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM--GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
++...... .......||+.|||||++. ...|+.|+||||||+++|||+||+.||...... .
T Consensus 191 sr~~~~~~-----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~--~---------- 253 (362)
T KOG0192|consen 191 SREKVISK-----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV--Q---------- 253 (362)
T ss_pred ceeecccc-----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH--H----------
Confidence 98653321 2222367999999999999 669999999999999999999999999876431 0
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhhhc
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKYKG 1000 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~~~ 1000 (1003)
....++... .++.....+...+..++.+||+.+|+.||++.+++..|+.+...+..
T Consensus 254 -~~~~v~~~~------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 254 -VASAVVVGG------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred -HHHHHHhcC------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 011111111 12222333778899999999999999999999999999998887654
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-44 Score=385.52 Aligned_cols=261 Identities=33% Similarity=0.522 Sum_probs=219.2
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
....+...+.||+|.||+||.|.+.++ ..||+|.++.. ....+.|.+|+++|++++|++||+++++|.. ++..
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-----~~pi 276 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTK-----QEPI 276 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEec-----CCce
Confidence 344566778999999999999999744 47999999744 4445889999999999999999999999853 3468
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
+||||||+.|+|.++++... +..+...+.+.++.|||+||+||+++ ++||||+.++||||+++..+||+|||+|
T Consensus 277 yIVtE~m~~GsLl~yLr~~~---~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLA 350 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTRE---GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLA 350 (468)
T ss_pred EEEEEecccCcHHHHhhhcC---CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccc
Confidence 99999999999999999843 56789999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchh
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
+...+..+.... ...-+..|.|||++..+.++.|||||||||+||||+| |+.||..+.+. +
T Consensus 351 r~~~d~~Y~~~~----~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~--------------e 412 (468)
T KOG0197|consen 351 RLIGDDEYTASE----GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE--------------E 412 (468)
T ss_pred cccCCCceeecC----CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH--------------H
Confidence 965554433322 2334678999999999999999999999999999999 99998876542 3
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhh
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKY 998 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~ 998 (1003)
+.+.+++. .|.+.++.|+..++++|..||..+|++|||++.+...++.+....
T Consensus 413 v~~~le~G------yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 413 VLELLERG------YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred HHHHHhcc------CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 33334433 334445668899999999999999999999999999998877643
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-44 Score=353.63 Aligned_cols=262 Identities=23% Similarity=0.345 Sum_probs=214.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC-Cc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD-DF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~-~~ 779 (1003)
.+|++.++||+|.||+||++.+..++..||.|.++... ....++...|+.+++.++|||||++++.- +.++ ..
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~----f~~~~ev 94 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHS----FIEDNEV 94 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHh----hhccchh
Confidence 46889999999999999999999999999999987443 34467899999999999999999998842 3334 44
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEeccCCCCceEeCCCCCeEEcccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQP-PIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
.++|||++++|+|.+.|+..+.+ +..+++..+|+++.|++.|++++|...+. -|+||||||.||+++.+|.+|++|||
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~q-kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQ-KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhc-cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence 89999999999999999987665 67899999999999999999999994322 28899999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
+++++.... ......+|||.||+||.+.+..|+++|||||+||++|||+.-+.||.+.. + .
T Consensus 174 L~r~l~s~~-----tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-----~---------~ 234 (375)
T KOG0591|consen 174 LGRFLSSKT-----TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-----L---------L 234 (375)
T ss_pred hHhHhcchh-----HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-----H---------H
Confidence 999885433 33345789999999999999999999999999999999999999997631 0 1
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+.+-|..+ +.++ -..+-++..+..++..|+.+||+.||+.-.++..+..
T Consensus 235 ~L~~KI~qg---d~~~--~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 235 SLCKKIEQG---DYPP--LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHHHHHHcC---CCCC--CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 122223322 2211 1124567889999999999999999997666666554
No 12
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-43 Score=381.13 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=214.3
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.+|...+.||+|+|+.||++++..+|..||+|++.+. +....+...+|+++.+.++|||||+++++ |++..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 5799999999999999999999889999999999743 45556789999999999999999999999 788999
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
+|+|.|+|..++|..++++ .+.+++.+++.+.+||+.|+.|||++ +|+|||+|..|++++++.++||+|||+
T Consensus 93 VYivLELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGL 164 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGL 164 (592)
T ss_pred eEEEEEecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccce
Confidence 9999999999999999986 57899999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
|..+... .......+|||.|.|||++.....++.+||||+|||+|-|+.|++||+...
T Consensus 165 At~le~~-----~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~----------------- 222 (592)
T KOG0575|consen 165 ATQLEYD-----GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT----------------- 222 (592)
T ss_pred eeeecCc-----ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----------------
Confidence 9877432 223345789999999999999999999999999999999999999998632
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.+..++....+. ..+.....+..+++.+.++++|++|||+.+|+.+
T Consensus 223 vkety~~Ik~~~Y----~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 223 VKETYNKIKLNEY----SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHHHHHHhcCc----ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2222222222211 1122445667888999999999999999999976
No 13
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8e-43 Score=395.61 Aligned_cols=266 Identities=28% Similarity=0.493 Sum_probs=222.6
Q ss_pred ccCCccCeeeeccceEEEEEEEC-----CCCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLG-----EDLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
.+.+..+.||+|+||+||+|+.. +....||||.++..... ..++|++|++.+..++|||||+++|+|. .
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~-----~ 560 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR-----E 560 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-----c
Confidence 34556788999999999999874 34467999999866655 7889999999999999999999999985 3
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQV---------DGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 847 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~ 847 (1003)
++..++|+|||..|+|.+|+..+.+.. ..+++..+.+.||.|||.||+||-++ .+||||+..+|+||+
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVG 637 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceec
Confidence 667799999999999999998865432 23389999999999999999999999 899999999999999
Q ss_pred CCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcc
Q 001858 848 HDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGL 926 (1003)
Q Consensus 848 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~ 926 (1003)
++..|||+|||+++.....++..... ...=+++|||||.+..++|+.+||||||||++||+++ |+.||.+..++
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~---~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~-- 712 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRG---NTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ-- 712 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccC---CceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--
Confidence 99999999999999887666554322 1234689999999999999999999999999999999 99998775542
Q ss_pred hhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhhh
Q 001858 927 TLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKYK 999 (1003)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~~ 999 (1003)
++.+.+...-. .+.++.|+.+++.+|..||+.+|++||+++||-..|++..+.-+
T Consensus 713 ------------EVIe~i~~g~l------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 713 ------------EVIECIRAGQL------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred ------------HHHHHHHcCCc------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 33333332222 23356788999999999999999999999999999988765443
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.7e-42 Score=342.90 Aligned_cols=270 Identities=21% Similarity=0.284 Sum_probs=210.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
+.|+...++|+|+||+||+++++.+|+.||||++....+ .-.+-.++|+++++.++|||+|.++++ |.....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV-----Frrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV-----FRRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH-----HHhccee
Confidence 468888999999999999999999999999999974433 224567899999999999999999999 5667889
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++|+||++. ++.+-++.+. ..++...+.++++|++.|+.|+|++ ++|||||||+|||++.+|.+|+||||+|
T Consensus 77 hLVFE~~dh-TvL~eLe~~p----~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFA 148 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYP----NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFA 148 (396)
T ss_pred EEEeeecch-HHHHHHHhcc----CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhh
Confidence 999999998 6666666653 4578889999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhh-HHHHhhCch
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLH-GFVKMALPE 938 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~-~~~~~~~~~ 938 (1003)
+.+.. ....++-++.|.+|.|||.+.+ .+|+..+||||+||++.||++|.+-|.+...-++-+. ...-..+.+
T Consensus 149 R~L~~-----pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~p 223 (396)
T KOG0593|consen 149 RTLSA-----PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIP 223 (396)
T ss_pred HhhcC-----CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCH
Confidence 98752 2233444678999999999887 6899999999999999999999988876432222111 111111223
Q ss_pred hHHHHHHhh------ccc---CCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFA------LLL---DPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~------l~~---~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+-..+.... ... ++.+...........+.+++..|++.||++|++-+|++.|
T Consensus 224 rhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 224 RHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred HHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 333332211 111 1112222334455678899999999999999999999864
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=349.81 Aligned_cols=202 Identities=33% Similarity=0.496 Sum_probs=183.1
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
..++|++.++||+|+||+||.++.+++++.+|+|++++.. ..+.+...+|..++.+++||.||+++.. |++.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccC
Confidence 3578999999999999999999999999999999997543 3456788999999999999999999876 7889
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..|+|+||+.||.|..++++ ++.+++..++-++.+|+.||.|||+. +|||||+||+|||+|++|+++|+||
T Consensus 98 ~kLylVld~~~GGeLf~hL~~-----eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQR-----EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred CeEEEEEeccCCccHHHHHHh-----cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecc
Confidence 999999999999999999998 57899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHT 920 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~ 920 (1003)
|+++.... .......++||+.|||||++.+..|+.++|.||+|+++|||++|.+||..
T Consensus 170 gL~k~~~~-----~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~ 227 (357)
T KOG0598|consen 170 GLCKEDLK-----DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA 227 (357)
T ss_pred ccchhccc-----CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence 99985422 22333458999999999999999999999999999999999999999975
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=348.26 Aligned_cols=261 Identities=26% Similarity=0.396 Sum_probs=217.7
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
....|++.++||.|..++||+|+....+..||||++..+... ..+.+.+|+..++.++||||++++.. |..+..
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~s-----Fvv~~~ 98 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCS-----FVVDSE 98 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEE-----EEecce
Confidence 356899999999999999999999999999999999866543 35889999999999999999999987 566788
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.|+||.||.+|++.+.++... ...+++..+..|.+++++||.|||.+ |.||||||+.|||++.+|.+||+|||.
T Consensus 99 LWvVmpfMa~GS~ldIik~~~---~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYY---PDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHc---cccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCcee
Confidence 999999999999999999875 34599999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCC--CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG--GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
+..+.+......... ..++||+.|||||++.. ..|+.|+||||||++..|+.+|..||..+++-.
T Consensus 173 sa~l~~~G~R~~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk------------ 239 (516)
T KOG0582|consen 173 SASLFDSGDRQVTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK------------ 239 (516)
T ss_pred eeeecccCceeeEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH------------
Confidence 988776542222222 56789999999999544 468999999999999999999999998765321
Q ss_pred hhHHHHHHhhcccCC------CCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDP------GNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~------~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.-..++.+| .............|.+++..|++.||++|||+++++++
T Consensus 240 -----vLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 240 -----VLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred -----HHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1112222222 11223334456689999999999999999999999975
No 17
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-42 Score=368.45 Aligned_cols=375 Identities=24% Similarity=0.268 Sum_probs=295.5
Q ss_pred ceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCc
Q 001858 200 QQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQN 279 (1003)
Q Consensus 200 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N 279 (1003)
+.|++++|++....+..|.++++|+.+++..|.++. +|.... ...+|+.|+|.+|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~------------------------IP~f~~-~sghl~~L~L~~N 135 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTR------------------------IPRFGH-ESGHLEKLDLRHN 135 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhhh------------------------cccccc-cccceeEEeeecc
Confidence 456666666666666666666666666666666552 222221 3345666777777
Q ss_pred ccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCC
Q 001858 280 NLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRF 359 (1003)
Q Consensus 280 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 359 (1003)
.|+.+-.+.++.++.|+.||||.|.|+.+.-..|..-.++++|+|++|.|+.++.+. |.++.+|.+|.|+.|++
T Consensus 136 ~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~------F~~lnsL~tlkLsrNri 209 (873)
T KOG4194|consen 136 LISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGH------FDSLNSLLTLKLSRNRI 209 (873)
T ss_pred ccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccccc------ccccchheeeecccCcc
Confidence 777666667777788888888888888777667777777888888888888877764 44666788888888888
Q ss_pred CCCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCccccccccceeccccccccccccccc
Q 001858 360 GGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSI 439 (1003)
Q Consensus 360 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 439 (1003)
+...+..|.++++|+.|+|..|+|.-.--..|.++++|+.|.|..|.|.......|..+.++++|+|+.|+++..-..++
T Consensus 210 ttLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~l 289 (873)
T KOG4194|consen 210 TTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWL 289 (873)
T ss_pred cccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccc
Confidence 87777778888888888888888875446678888888888888888887777788888888888888888887777788
Q ss_pred cCCCccceeecccccccccCCccccCCCCCCeeeccCccccCCCchhhhhhccccccccCCCCccccccccccccccccc
Q 001858 440 GNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLI 519 (1003)
Q Consensus 440 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~ 519 (1003)
.+++.|+.|+||+|.|+..-++++..+++|++|+|++|+|+ .++++-+...+.++.|+|++|.++......|..+++|+
T Consensus 290 fgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~ 368 (873)
T KOG4194|consen 290 FGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLH 368 (873)
T ss_pred cccchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhh
Confidence 88888888888888888777888888888888888888888 67777666666677778888888877778899999999
Q ss_pred cccccccccccccCc---cccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCCcccccCCCccceEecC
Q 001858 520 QLDISRNRFSGEIPT---TLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYLNLS 596 (1003)
Q Consensus 520 ~L~Ls~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~ 596 (1003)
.|||++|.|+..|.+ .|.++++|+.|+|.+|+|......+|.++..|+.|||.+|.|..+-|++|..+ .|+.|-++
T Consensus 369 ~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 369 KLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred hhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 999999999977654 68889999999999999995555789999999999999999999999999999 89999998
Q ss_pred CCcccccCCCC
Q 001858 597 YNDFEGQVPTK 607 (1003)
Q Consensus 597 ~N~l~~~~p~~ 607 (1003)
.-.|-|.+-.+
T Consensus 448 SssflCDCql~ 458 (873)
T KOG4194|consen 448 SSSFLCDCQLK 458 (873)
T ss_pred ccceEEeccHH
Confidence 88887776554
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-41 Score=360.84 Aligned_cols=259 Identities=26% Similarity=0.402 Sum_probs=212.2
Q ss_pred HHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhc-CCCCceeEeeeeeeccc
Q 001858 699 NKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 699 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 774 (1003)
++...+|.+++.||+|+|++||+|+...+++.||||++.+. .+...+....|-.+|.++ .||.|++++.. |
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----F 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----F 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----e
Confidence 34567899999999999999999999999999999998633 334456777889999999 89999999977 7
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEE
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 854 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl 854 (1003)
.++...|+|+||+++|+|.++|++ .+.+++..++.++.+|+.|++|||++ |||||||||+|||+|.||++||
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K-----~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikI 215 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKK-----YGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKI 215 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHH-----hCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEE
Confidence 888999999999999999999998 46899999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCcc------c--cCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcc
Q 001858 855 SDFGLAKFLFDRPIQ------E--TSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGL 926 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~------~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~ 926 (1003)
+|||.|+.+.+.... . .......++||..|.+||++..+..++++|+|+||||+|+|+.|++||.+... ..
T Consensus 216 TDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-yl 294 (604)
T KOG0592|consen 216 TDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-YL 294 (604)
T ss_pred eeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-HH
Confidence 999999988754322 1 11122568999999999999999999999999999999999999999976321 00
Q ss_pred hhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 927 TLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
. .+++++. ...-| +..++...+++.+.+..||++|++.++|.+|-
T Consensus 295 i------------FqkI~~l-~y~fp-------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 295 I------------FQKIQAL-DYEFP-------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred H------------HHHHHHh-cccCC-------CCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 0 1122221 11111 12234556667777788999999999998763
No 19
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=375.52 Aligned_cols=260 Identities=28% Similarity=0.486 Sum_probs=219.2
Q ss_pred cCCccCeeeeccceEEEEEEECCCC---ceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDL---LPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
...+.++||.|.||+||+|+.+..+ ..||||.++... +..+.+|..|+.||.++.||||+++.|+. .....
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV-----Tks~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV-----TKSKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE-----ecCce
Confidence 3457889999999999999997555 569999998543 44567999999999999999999999994 55677
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|.|||++|+|+.|++.+ ++.+.+.|...+.++||.|++||.+. ++||||+.++||||+.+..+|++|||+
T Consensus 705 vMIiTEyMENGsLDsFLR~~----DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQN----DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhc----CCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccc
Confidence 89999999999999999986 46799999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
++.+.+.. +......+-.-+.+|.|||++...+++.+|||||+|+++||.++ |..||.++.+.
T Consensus 778 SRvledd~--~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ-------------- 841 (996)
T KOG0196|consen 778 SRVLEDDP--EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-------------- 841 (996)
T ss_pred eeecccCC--CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH--------------
Confidence 99886544 11111112223579999999999999999999999999999888 99999987653
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
++...++... |.+.+.+|+..+.++|++||+.|-.+||.+++|+..|.++.++
T Consensus 842 dVIkaIe~gy------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 842 DVIKAIEQGY------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred HHHHHHHhcc------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 3333344333 3344567889999999999999999999999999999887653
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=348.95 Aligned_cols=265 Identities=27% Similarity=0.402 Sum_probs=209.9
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|...+.||+|+||+||++.+..++...|||..........+.+.+|++++++++|||||+++|.... .....++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~---~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSS---RENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccc---ccCeeeE
Confidence 4568888999999999999999998899999999876544346779999999999999999999996322 1113688
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-CCCeEEcccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGLA 860 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~DfG~a 860 (1003)
++|||+++|+|.+++.+.. +.+++..+..+..||++|++|||++ |||||||||+|||++. ++.+||+|||++
T Consensus 93 i~mEy~~~GsL~~~~~~~g----~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a 165 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYG----GKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLA 165 (313)
T ss_pred eeeeccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccc
Confidence 9999999999999999853 2799999999999999999999999 9999999999999999 799999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
..... ............||+.|||||++..+ ...+++||||+||++.||+||+.||.... +.
T Consensus 166 ~~~~~--~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~---------------~~ 228 (313)
T KOG0198|consen 166 KKLES--KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF---------------EE 228 (313)
T ss_pred ccccc--ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc---------------ch
Confidence 86643 12223334457899999999999854 44569999999999999999999987530 00
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
........ .... .+..++.++....+++.+|+..+|+.|||++++++|.....+
T Consensus 229 ~~~~~~ig-~~~~--~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 229 AEALLLIG-REDS--LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred HHHHHHHh-ccCC--CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 01111111 1110 112223356677889999999999999999999998765443
No 21
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.8e-40 Score=321.31 Aligned_cols=268 Identities=23% Similarity=0.331 Sum_probs=210.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.+|...+++|+|.||.||+|++.++|+.||||.++... ++-.....+|++.++.++||||+.++++ |...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCCce
Confidence 46888899999999999999999999999999997443 3335678899999999999999999999 6678888
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
.+|+|||+. +|...|+.. ...+...++..++.++++|++|||++ .|+|||+||.|+|++.+|.+||+|||+|
T Consensus 77 ~lVfEfm~t-dLe~vIkd~----~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLA 148 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDK----NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLA 148 (318)
T ss_pred EEEEEeccc-cHHHHhccc----ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccch
Confidence 999999988 999999875 45789999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh---hC
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM---AL 936 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~---~~ 936 (1003)
+.+...... ....+.|.+|.|||.+.|. .|+..+||||.|||+.||+-|.+-|.+...- .++...+.. ..
T Consensus 149 r~f~~p~~~-----~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi-dQL~~If~~LGTP~ 222 (318)
T KOG0659|consen 149 RFFGSPNRI-----QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI-DQLSKIFRALGTPT 222 (318)
T ss_pred hccCCCCcc-----cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH-HHHHHHHHHcCCCC
Confidence 987643322 2223679999999998875 6899999999999999999988776653321 122111111 11
Q ss_pred chhH---H---HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKV---M---EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~---~---~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
++++ . +..+-.....+ ........+..+..+++..++..+|.+|.+++|++++
T Consensus 223 ~~~WP~~~~lpdY~~~~~~P~~-~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 223 PDQWPEMTSLPDYVKIQQFPKP-PLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccCccccccccHHHHhcCCCC-ccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111 1 11221111111 2222344556677899999999999999999999876
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-40 Score=349.06 Aligned_cols=273 Identities=24% Similarity=0.341 Sum_probs=212.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.+.|+.+++||+|.||.||+|++..+|+.||+|+++... ++......+||.++++++||||+++.+.... .....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~---~~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS---KLSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe---cCCce
Confidence 356778899999999999999999999999999998654 5667788999999999999999999998654 23568
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.|+|+|||++ +|.-++... .-.+++.++..++.|++.|++|+|++ ||+|||||.+|||+|.+|.+||+|||+
T Consensus 193 iYlVFeYMdh-DL~GLl~~p----~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSP----GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEEEEecccc-hhhhhhcCC----CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccc
Confidence 8999999999 898888763 45799999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC--
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL-- 936 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~-- 936 (1003)
|+++.... ....+..+.|.+|.|||.+.|. .|+.++|+||.|||+.||+.|++.|.+...- .++...++..-
T Consensus 265 Ar~y~~~~----~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv-eQl~kIfklcGSP 339 (560)
T KOG0600|consen 265 ARFYTPSG----SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV-EQLHKIFKLCGSP 339 (560)
T ss_pred eeeccCCC----CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH-HHHHHHHHHhCCC
Confidence 99875433 2234557789999999998875 7999999999999999999999998764321 12222221111
Q ss_pred chhHHHHHH---hhcccCCCC-c---hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKVMEIVD---FALLLDPGN-E---RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~~~~i~---~~l~~~~~~-~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.++.....+ ......... + ++.........++++..++..||++|.|+.+++++
T Consensus 340 ~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 340 TEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 111111000 000000011 1 12233455677888889999999999999998864
No 23
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.6e-40 Score=351.28 Aligned_cols=248 Identities=29% Similarity=0.467 Sum_probs=214.1
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++|.+.+.||+|+||.||||+.+.+.+.||+|.+.+..+ .+.+.+.+|++++++++||||+.++++ |+...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 578888999999999999999999999999999975543 446789999999999999999999998 6778899
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++|.||+.| +|..+++. ++.++++++..++.+++.|+.|||+. +|.|||+||+||+++..|++|+||||+|
T Consensus 77 ~vVte~a~g-~L~~il~~-----d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQ-----DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred EEEehhhhh-hHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhh
Confidence 999999988 99999998 67899999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
+.+... ........||+.|||||...+++|+..+|.||+||++|||++|++||-. ..+
T Consensus 148 r~m~~~-----t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----------------~si 205 (808)
T KOG0597|consen 148 RAMSTN-----TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----------------RSI 205 (808)
T ss_pred hhcccC-----ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----------------HHH
Confidence 977443 2333457899999999999999999999999999999999999999853 234
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.++++.....++ .-+ ......+..+....+..||..|.+..+++.|
T Consensus 206 ~~Lv~~I~~d~v-~~p---~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 206 TQLVKSILKDPV-KPP---STASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHHHHHhcCCC-CCc---ccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 444444433322 111 1456778888889999999999999999875
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=357.39 Aligned_cols=268 Identities=27% Similarity=0.425 Sum_probs=213.7
Q ss_pred HHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecc
Q 001858 696 AELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSID 773 (1003)
Q Consensus 696 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 773 (1003)
.++....++..+.+.||+|+||+||+|+|.++ ||||++.... ++..+.|.+|+.++++-+|.||+-|.|||..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~-- 459 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN-- 459 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC--
Confidence 45555677788999999999999999999865 9999998554 3356899999999999999999999999643
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeE
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 853 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~k 853 (1003)
+.. .+|+.+++|.+|+.+++.. +..++..+...||.||++|+.|||.+ +|||||+|..||++.++++||
T Consensus 460 ---p~~-AIiTqwCeGsSLY~hlHv~----etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVk 528 (678)
T KOG0193|consen 460 ---PPL-AIITQWCEGSSLYTHLHVQ----ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVK 528 (678)
T ss_pred ---Cce-eeeehhccCchhhhhccch----hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEE
Confidence 333 8999999999999999875 46799999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCCC---CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhH
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG---NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHG 930 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~ 930 (1003)
|+|||++..-..- ..........|...|||||++..+ +|++.+||||||+|+|||++|..||.. .+.+..+..
T Consensus 529 IgDFGLatvk~~w---~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqIifm 604 (678)
T KOG0193|consen 529 IGDFGLATVKTRW---SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQIIFM 604 (678)
T ss_pred Eecccceeeeeee---ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhheEEE
Confidence 9999999643211 111122234578899999987653 689999999999999999999999983 322221110
Q ss_pred HHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhh
Q 001858 931 FVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKY 998 (1003)
Q Consensus 931 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~ 998 (1003)
.-+.... .+.......+.+++.+++..||..++++||.+.+|+..|+++..+.
T Consensus 605 VGrG~l~---------------pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 605 VGRGYLM---------------PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred ecccccC---------------ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 0000000 0112233456788999999999999999999999999998887753
No 25
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-40 Score=347.01 Aligned_cols=272 Identities=20% Similarity=0.273 Sum_probs=212.0
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccch-HHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSI-KSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 778 (1003)
..++|.+.++||.|.||.||+|+...++..||||.++..-..+. -.=.+|++.+++++ ||||+++.+++ .+.+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi-----~d~~ 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVI-----RDND 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHh-----hccC
Confidence 35689999999999999999999999999999999974433322 23368999999998 99999999984 3344
Q ss_pred -ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 779 -FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 779 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
..++|||||+. +|+++++.+ +..+++.+++.|+.||++||+|+|++ |+.|||+||+|||+.....+||+||
T Consensus 83 ~~L~fVfE~Md~-NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 83 RILYFVFEFMDC-NLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred ceEeeeHHhhhh-hHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccc
Confidence 89999999976 999999885 56899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccC-CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchh--hHHHHh
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM-GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTL--HGFVKM 934 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~--~~~~~~ 934 (1003)
|+||..... ..++.++.|.+|.|||++. .+.|+.+.||||+|||++|+.+-++-|.+...-++-+ .+....
T Consensus 155 GLARev~Sk------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGt 228 (538)
T KOG0661|consen 155 GLAREVRSK------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGT 228 (538)
T ss_pred ccccccccC------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCC
Confidence 999977543 2334467899999999865 5688999999999999999999998887643222211 111111
Q ss_pred hCc---hhHHHHHHhhcccCCCCc----hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 935 ALP---EKVMEIVDFALLLDPGNE----RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 935 ~~~---~~~~~~i~~~l~~~~~~~----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
... .+-..+...+-..-|... ......+..+..+++.+|+.+||.+|||++|.+++-
T Consensus 229 P~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 229 PDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred CccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 111 111223333322222222 222334677889999999999999999999999863
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=352.80 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=214.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
..|..-++||+|+.|.||.|....+++.||||++........+-+.+|+.+|+..+|+|||++++-| ...+..++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sy-----lv~deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSY-----LVGDELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHh-----cccceeEE
Confidence 4577778999999999999999999999999999988888888899999999999999999999874 44578899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
|||||+||+|.|.+... .+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..
T Consensus 348 VMEym~ggsLTDvVt~~------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaq 418 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKT------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQ 418 (550)
T ss_pred EEeecCCCchhhhhhcc------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeec
Confidence 99999999999999863 489999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME 942 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1003)
+.... ......+||+.|||||+.....|++++||||||++++||+-|.+||-... .++.
T Consensus 419 i~~~~-----~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~----------------PlrA 477 (550)
T KOG0578|consen 419 ISEEQ-----SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN----------------PLRA 477 (550)
T ss_pred ccccc-----CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC----------------hHHH
Confidence 64432 34456789999999999999999999999999999999999999985321 1122
Q ss_pred HHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 943 IVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 943 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.--.... ..+....+.+...+.++..+|+..||++|++++|+++|
T Consensus 478 lyLIa~ng--~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 478 LYLIATNG--TPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHhhcC--CCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 11111112 22333445667889999999999999999999999986
No 27
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=353.35 Aligned_cols=375 Identities=21% Similarity=0.247 Sum_probs=288.8
Q ss_pred CCcccCccccCCCCCcEEEcCCCCCCCCCchhhcccccCcEEEecccccccccCccCcCCCCCceeecccccccCCCCcc
Q 001858 88 VGGFLSPYVGNLSFLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAY 167 (1003)
Q Consensus 88 ~~g~~~~~l~~l~~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~ 167 (1003)
+.|.+|+ .-+.||||+|.++..=+.+|.++.+|+.++|..|.++ .||...+...+|+.|+|.+|.|+ ++..+
T Consensus 72 l~g~lp~------~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~-sv~se 143 (873)
T KOG4194|consen 72 LKGFLPS------QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLIS-SVTSE 143 (873)
T ss_pred cCCcCcc------ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccc-cccHH
Confidence 4555554 3467999999999667788999999999999999999 89998888888999999999998 45443
Q ss_pred ccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCCccc-CCch
Q 001858 168 IGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFN-ISSL 246 (1003)
Q Consensus 168 ~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-l~~L 246 (1003)
--..++.|+.||||.|.++..--+++..-.++++|+|++|+|+..--+.|..+.+|.+|.|+.|+++..++..|. ++.|
T Consensus 144 ~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L 223 (873)
T KOG4194|consen 144 ELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKL 223 (873)
T ss_pred HHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchh
Confidence 333458899999999999854446777778899999999999988788899999999999999999987776665 7788
Q ss_pred hHHhhcccccCCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCC
Q 001858 247 EQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQ 326 (1003)
Q Consensus 247 ~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 326 (1003)
+.|+|..|++. .+-...|.++++|+.|.|..|.|...-...|..+.++++|+|+.|+++..-..++.+++.|+.|+|++
T Consensus 224 ~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~ 302 (873)
T KOG4194|consen 224 ESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSY 302 (873)
T ss_pred hhhhcccccee-eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccch
Confidence 88888888776 33333455777777777777777766666777777777777777777777777777777777777777
Q ss_pred CCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEccccc
Q 001858 327 NNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQ 406 (1003)
Q Consensus 327 N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 406 (1003)
|.|..+.+..|. -+++|++|+|++|+|+...+.+|..++.|++|+|++|.|...-..+|..+++|++|||++|.
T Consensus 303 NaI~rih~d~Ws------ftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ 376 (873)
T KOG4194|consen 303 NAIQRIHIDSWS------FTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNE 376 (873)
T ss_pred hhhheeecchhh------hcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCe
Confidence 777777666543 36777778888887777777777777777777777777776666777777777777777777
Q ss_pred ccccCCC---ccccccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCCeeeccCcc
Q 001858 407 LTGTIPY---TIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNK 478 (1003)
Q Consensus 407 l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 478 (1003)
|...+.+ .|.++++|+.|+|.+|+|..+...+|.++.+|++|+|.+|.|...-|++|..+ .|++|-+..-.
T Consensus 377 ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSss 450 (873)
T KOG4194|consen 377 LSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSS 450 (873)
T ss_pred EEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccc
Confidence 7765543 46667777777777777776666677777777777777777777777777777 77777665433
No 28
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=351.24 Aligned_cols=251 Identities=26% Similarity=0.361 Sum_probs=207.1
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc----cc-cchHHHHHHHHHHHhcC-CCCceeEeeeeeeccc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK----QK-GSIKSFVAECEALKNIR-HRNLIKIITVCSSIDF 774 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 774 (1003)
..+.|.+.+.||+|+||.|+.|.+..++..||+|++... .. ...+.+.+|+.++++++ ||||+++++++
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~----- 89 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF----- 89 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE-----
Confidence 457899999999999999999999999999999987653 22 23456778999999998 99999999994
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC-CCeE
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAH 853 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~k 853 (1003)
......++||||+.+|+|.+++.. .+.+.+.++..++.|++.|++|+|++ ||+||||||+||+++.+ +.+|
T Consensus 90 ~t~~~~~ivmEy~~gGdL~~~i~~-----~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~K 161 (370)
T KOG0583|consen 90 ATPTKIYIVMEYCSGGDLFDYIVN-----KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLK 161 (370)
T ss_pred ecCCeEEEEEEecCCccHHHHHHH-----cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEE
Confidence 456668999999999999999998 46788999999999999999999999 99999999999999999 9999
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCCCC-CC-ccccchhHHHHHHHHHhCCCCCCcccCCcchhhHH
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN-VS-LTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~ 931 (1003)
|+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++...
T Consensus 162 l~DFG~s~~~~-----~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~-------- 228 (370)
T KOG0583|consen 162 LSDFGLSAISP-----GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV-------- 228 (370)
T ss_pred EeccccccccC-----CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--------
Confidence 99999998763 1223334578999999999999977 76 789999999999999999999986211
Q ss_pred HHhhCchhHHHHHHhhcccCCCCchhhHHHH-HHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 932 VKMALPEKVMEIVDFALLLDPGNERAKIEEC-LTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~-~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+...+.+....-|. .+ ...+..++.+|+..+|.+|+++.|+.++
T Consensus 229 ------~~l~~ki~~~~~~~p~-------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 229 ------PNLYRKIRKGEFKIPS-------YLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred ------HHHHHHHhcCCccCCC-------CcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 1111112222222221 11 5567888999999999999999999955
No 29
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-39 Score=352.95 Aligned_cols=251 Identities=24% Similarity=0.326 Sum_probs=213.0
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.+-|++++-||.|+.|.|-.|++..+|+.+|||++.... ......+.+|+-+|+-+.||||++++++ +++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCc
Confidence 356889999999999999999999999999999997552 2234678899999999999999999999 67889
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
++|+|.||+++|.|++++-. ++++++.++.++++||+.|+.|+|.. +|+|||+||+|+|+|..+.+||+|||
T Consensus 86 ~lylvlEyv~gGELFdylv~-----kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVR-----KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred eEEEEEEecCCchhHHHHHh-----hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccc
Confidence 99999999999999999988 67899999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCC-ccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVS-LTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
+|....++.. -...+|++.|+|||++.|.+|+ .++||||.|||+|.+++|+.||++.
T Consensus 158 MAsLe~~gkl------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd---------------- 215 (786)
T KOG0588|consen 158 MASLEVPGKL------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD---------------- 215 (786)
T ss_pred eeecccCCcc------ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc----------------
Confidence 9986544333 3346799999999999999885 7899999999999999999999841
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
.++.+..+-... ...++...+.+..+++++|+..||++|.|++||.+|-.
T Consensus 216 -Nir~LLlKV~~G----~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 216 -NIRVLLLKVQRG----VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred -cHHHHHHHHHcC----cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCch
Confidence 222222222211 12233455667888899999999999999999998753
No 30
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-39 Score=377.15 Aligned_cols=265 Identities=26% Similarity=0.469 Sum_probs=219.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCC-----ceEEEEEeccc-cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDL-----LPVAVKVINLK-QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
...+..+.||+|+||+||+|...... ..||||.+++. +.++..+|.+|..+|+.++||||++++|+|. .
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l----~- 766 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL----D- 766 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec----C-
Confidence 34556788999999999999985432 34999988744 4566789999999999999999999999984 3
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEE
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQV--DGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 854 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl 854 (1003)
....++++|||++|+|..||++.+... ...+...+...++.|||+|+.||+++ ++|||||.++|+|+++...+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEE
Confidence 666799999999999999999975432 45689999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHH
Q 001858 855 SDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~ 933 (1003)
+|||+|+.+.+..+...... ..-+.+|||||.+..+.++.|+|||||||++||+++ |..||....+.+.
T Consensus 844 aDFGlArDiy~~~yyr~~~~---a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v------- 913 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGE---AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV------- 913 (1025)
T ss_pred cccchhHhhhhchheeccCc---cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-------
Confidence 99999998776665544433 223568999999999999999999999999999999 9999987543211
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhh
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKY 998 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~ 998 (1003)
+..+.... |.+.+..|++.++++|.+||+.+|++||++..+++.+.++.+..
T Consensus 914 ------~~~~~~gg-------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 914 ------LLDVLEGG-------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred ------HHHHHhCC-------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 11122222 34445678899999999999999999999999999888876554
No 31
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=327.04 Aligned_cols=279 Identities=22% Similarity=0.261 Sum_probs=221.6
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEec--cccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVIN--LKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
....|...+.||+|+||.|+.|.++.+++.||||++. .......++..+|+++++.++|+||+.+.++........-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3456666799999999999999999999999999997 56666778999999999999999999999997664445567
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..|+|+|+|+. +|.+.++. +..+....+..+..|+++|++|+|+. +|+|||+||+|++++.+..+||+|||
T Consensus 100 DvYiV~elMet-DL~~iik~-----~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIKS-----QQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred eeEEehhHHhh-HHHHHHHc-----CccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccc
Confidence 78999999966 99999987 34589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcc-hhhH------
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGL-TLHG------ 930 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~-~~~~------ 930 (1003)
+|+..... ......+..+.|.+|.|||.+.. ..|+.+.||||.|||+.||++|+.-|.+...-++ ....
T Consensus 171 LAR~~~~~---~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP 247 (359)
T KOG0660|consen 171 LARYLDKF---FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP 247 (359)
T ss_pred ceeecccc---CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC
Confidence 99987543 23344456788999999998654 6899999999999999999999999876432211 1111
Q ss_pred ---HHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 931 ---FVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 931 ---~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.....-++.+...+...-...+.+-............++..+++..||.+|+|++|+++|-
T Consensus 248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 1111112233333443333333333344445667788999999999999999999999863
No 32
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.1e-38 Score=340.30 Aligned_cols=258 Identities=23% Similarity=0.337 Sum_probs=206.3
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
..++|++.++||+|+||+||+|+-+.+|..+|+|++++.. ....+....|-.+|....+|.||+++.. |.+.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecCC
Confidence 4578999999999999999999999999999999998553 4456788899999999999999999976 7889
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+++||||||++||++..+|.+ .+.+++..++.++.+++-||+-+|+. |+|||||||+|+|||..|++||+||
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~-----~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDF 285 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMR-----KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDF 285 (550)
T ss_pred CeeEEEEEecCCccHHHHHHh-----cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccc
Confidence 999999999999999999988 67899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCc------------------cccCc------------------------ccccccccccccCccccCCCCC
Q 001858 858 GLAKFLFDRPI------------------QETSS------------------------SSIGIKGTVGYVAPEYGMGGNV 895 (1003)
Q Consensus 858 G~a~~~~~~~~------------------~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~ 895 (1003)
|++.-+..... ..... .....+|||.|||||++.+..|
T Consensus 286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY 365 (550)
T KOG0605|consen 286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY 365 (550)
T ss_pred cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC
Confidence 99954422100 00000 0023679999999999999999
Q ss_pred CccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhc-ccCCCCchhhHHHHHHHHHHHHhhcc
Q 001858 896 SLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFAL-LLDPGNERAKIEECLTAVVRIGVLCS 974 (1003)
Q Consensus 896 ~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~~~~~~~~~~~~~~~l~~l~~~cl 974 (1003)
+..+|.||+|||+|||+.|.+||....+. +-...++.... ...|.+. .+..+..+++.+|+
T Consensus 366 ~~~cDwWSLG~ImyEmLvGyPPF~s~tp~-------------~T~rkI~nwr~~l~fP~~~-----~~s~eA~DLI~rll 427 (550)
T KOG0605|consen 366 GKECDWWSLGCIMYEMLVGYPPFCSETPQ-------------ETYRKIVNWRETLKFPEEV-----DLSDEAKDLITRLL 427 (550)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCCCHH-------------HHHHHHHHHhhhccCCCcC-----cccHHHHHHHHHHh
Confidence 99999999999999999999999875432 11222222111 1122111 22355677777888
Q ss_pred ccCCCCCCC---HHHHHHH
Q 001858 975 MESPSERIH---MADAVKN 990 (1003)
Q Consensus 975 ~~~p~~RPs---~~ev~~~ 990 (1003)
. ||++|.- ++||.+|
T Consensus 428 ~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 428 C-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred c-CHHHhcCcccHHHHhcC
Confidence 7 9999984 5666543
No 33
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=339.11 Aligned_cols=250 Identities=24% Similarity=0.358 Sum_probs=210.0
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
...|+..+.||+|+||.||+|.+..+++.||+|++..+. +.+++++++|+.++..++++||.++++. +..+...
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygs-----yl~g~~L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGS-----YLKGTKL 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhh-----eeecccH
Confidence 346777899999999999999999999999999998554 4567899999999999999999999998 4557778
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
+++|||+.||++.+.++. ...+.+..+.-+.+++..|+.|+|++ +.+|||||+.||++..+|.+|++|||.+
T Consensus 87 wiiMey~~gGsv~~lL~~-----~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKS-----GNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred HHHHHHhcCcchhhhhcc-----CCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence 999999999999999987 34457888888999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
..+.... .....++||+.|||||++....|+.|+||||+|++.+||++|.+|+....+-..
T Consensus 159 ~ql~~~~-----~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-------------- 219 (467)
T KOG0201|consen 159 GQLTNTV-----KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-------------- 219 (467)
T ss_pred eeeechh-----hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE--------------
Confidence 7654322 222458899999999999988999999999999999999999999987644111
Q ss_pred HHHHHhhcccCCCCchhhH-HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKI-EECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~-~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+..-|...++.. ..+...+.+++..|++.+|+.||++.++++|
T Consensus 220 -------lflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 220 -------LFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred -------EEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 111111111111 1456778999999999999999999999986
No 34
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.4e-38 Score=350.69 Aligned_cols=268 Identities=24% Similarity=0.395 Sum_probs=207.3
Q ss_pred HhccCCccCeeeeccceEEEEEEEC-----CCCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLG-----EDLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSID 773 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 773 (1003)
..++|++.++||+|+||.||+|.+. .+++.||+|+++... ....+.+.+|+++++.+ +||||++++++|.
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--- 81 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT--- 81 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec---
Confidence 3468999999999999999999852 345689999987432 23356789999999999 8999999999863
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCCC---------------------------------------------------
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSNDQ--------------------------------------------------- 802 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 802 (1003)
......++||||+++|+|.+++......
T Consensus 82 -~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 82 -KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred -CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 3345678999999999999999764211
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccCcccc
Q 001858 803 ------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSI 876 (1003)
Q Consensus 803 ------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 876 (1003)
+...+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++........ ....
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~---~~~~ 234 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---VRKG 234 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch---hccc
Confidence 123578889999999999999999999 9999999999999999999999999999765322111 1112
Q ss_pred cccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCc
Q 001858 877 GIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNE 955 (1003)
Q Consensus 877 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 955 (1003)
...++..|+|||++.+..++.++|||||||++|||++ |+.||......+ .....+......
T Consensus 235 ~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-------------~~~~~~~~~~~~----- 296 (338)
T cd05102 235 SARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-------------EFCQRLKDGTRM----- 296 (338)
T ss_pred CCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-------------HHHHHHhcCCCC-----
Confidence 2346788999999999999999999999999999997 999987643211 111111111000
Q ss_pred hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 956 RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 956 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
.....+...+.+++.+||+.+|++||++.|+++.|+.+.++
T Consensus 297 -~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 297 -RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 01122345688999999999999999999999999987653
No 35
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-39 Score=341.46 Aligned_cols=246 Identities=27% Similarity=0.403 Sum_probs=205.8
Q ss_pred CccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 706 SLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 706 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
.-.+-||.|+.|.||+|+.. ++.||||+++.-+ ..+++-+++++||||+.|.|+|.. ...++||||
T Consensus 127 sELeWlGSGaQGAVF~Grl~--netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtq-----sPcyCIiME 192 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQ-----SPCYCIIME 192 (904)
T ss_pred hhhhhhccCcccceeeeecc--CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecC-----CceeEEeee
Confidence 34577999999999999996 5589999886322 347888999999999999999864 456699999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
||..|-|.+.++. +..+...-...|..+||.|+.|||.+ .|||||+|.-||||+.+..+||+|||.++...+
T Consensus 193 fCa~GqL~~VLka-----~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 193 FCAQGQLYEVLKA-----GRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred ccccccHHHHHhc-----cCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 9999999999998 55788888899999999999999999 999999999999999999999999999987643
Q ss_pred CCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHH
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVD 945 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 945 (1003)
. .....++||..|||||++.+.+++.|+||||||||||||+||..||.+....... +.+
T Consensus 265 ~------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII--wGV------------- 323 (904)
T KOG4721|consen 265 K------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII--WGV------------- 323 (904)
T ss_pred h------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE--Eec-------------
Confidence 2 4455689999999999999999999999999999999999999999765432111 000
Q ss_pred hhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhh
Q 001858 946 FALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKY 998 (1003)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~ 998 (1003)
....-..+.+..|++-|.-++++||+..|..||++.+++.|+..+...+
T Consensus 324 ----GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 324 ----GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred ----cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 0111223455677888999999999999999999999999998765543
No 36
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=331.51 Aligned_cols=266 Identities=27% Similarity=0.360 Sum_probs=208.3
Q ss_pred HHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--------------cchHHHHHHHHHHHhcCCCCceeE
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--------------GSIKSFVAECEALKNIRHRNLIKI 765 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~~ 765 (1003)
+.-++|++.+.||+|.||.|-+|++..+++.||||++.+... ...+...+|+.++++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 345899999999999999999999999999999999963321 113578899999999999999999
Q ss_pred eeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceE
Q 001858 766 ITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVL 845 (1003)
Q Consensus 766 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nil 845 (1003)
+++.. ....+..|+|+||+..|.+.+.-.. ...+.+.++++++.++..||+|||.+ |||||||||+|+|
T Consensus 174 iEvLD---DP~s~~~YlVley~s~G~v~w~p~d-----~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLL 242 (576)
T KOG0585|consen 174 IEVLD---DPESDKLYLVLEYCSKGEVKWCPPD-----KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLL 242 (576)
T ss_pred EEeec---CcccCceEEEEEeccCCccccCCCC-----cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheE
Confidence 99853 4556789999999998877643221 22399999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCC----CCccccchhHHHHHHHHHhCCCCCCcc
Q 001858 846 LDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN----VSLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 846 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
++++|++||+|||.+..+..+........-...+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||-+.
T Consensus 243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 9999999999999998664332222222333467999999999877632 357889999999999999999998642
Q ss_pred cCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 922 FNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
. ..+..++... +| -..+..++..+.+..++.+++..||+.|.+..||..|.+..+
T Consensus 323 ~-----------------~~~l~~KIvn-~p-L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 323 F-----------------ELELFDKIVN-DP-LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred h-----------------HHHHHHHHhc-Cc-ccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 1 2222222221 11 112222345677888999999999999999999998876544
No 37
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=342.23 Aligned_cols=265 Identities=26% Similarity=0.454 Sum_probs=221.9
Q ss_pred HHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccC
Q 001858 696 AELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 696 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 775 (1003)
++++-...+....++||-|.||+||.|.|+...-.||||.++ ++....++|.+|+.+|+.++|||+|+++|+|..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK-EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~---- 334 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH---- 334 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh-hcchhHHHHHHHHHHHHhhcCccHHHHhhhhcc----
Confidence 334444456677889999999999999999999999999998 445567899999999999999999999999854
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEc
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 855 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~ 855 (1003)
+...|||+|||.+|+|.||++++. +..++....+.+|.||+.|++||..+ .+||||+.++|+||+++..+|++
T Consensus 335 -EpPFYIiTEfM~yGNLLdYLRecn---r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvA 407 (1157)
T KOG4278|consen 335 -EPPFYIITEFMCYGNLLDYLRECN---RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVA 407 (1157)
T ss_pred -CCCeEEEEecccCccHHHHHHHhc---hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEee
Confidence 456699999999999999999876 44677778899999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHh
Q 001858 856 DFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKM 934 (1003)
Q Consensus 856 DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~ 934 (1003)
|||+++++....+.... +..-++.|.|||-+....++.|+|||+|||++||+.| |-.||.+.+-.
T Consensus 408 DFGLsRlMtgDTYTAHA----GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS---------- 473 (1157)
T KOG4278|consen 408 DFGLSRLMTGDTYTAHA----GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---------- 473 (1157)
T ss_pred ccchhhhhcCCceeccc----CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH----------
Confidence 99999998665544432 2345788999999999999999999999999999999 88888764311
Q ss_pred hCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 935 ALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
++..++++.. |....+.|+..++++|+.||+++|++||+++|+-+.++.+..
T Consensus 474 ----qVY~LLEkgy------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 474 ----QVYGLLEKGY------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred ----HHHHHHhccc------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 1223333333 233456788999999999999999999999999999887543
No 38
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-38 Score=311.86 Aligned_cols=200 Identities=29% Similarity=0.412 Sum_probs=181.5
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
-.+|+..+.||.|+||.|.+++.+.++..+|+|++++.. ....+...+|..+++.+.||.++++++. +.+.+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t-----~~d~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGT-----FKDNS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEe-----eccCC
Confidence 357888999999999999999999999999999997543 2345678899999999999999999987 56788
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||++||.|..++++ .+.+++..++-+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk-----~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRK-----SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred eEEEEEeccCCccHHHHHHh-----cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEecc
Confidence 89999999999999999998 46799999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCccc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMF 922 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~ 922 (1003)
+|+...+. ....+||+.|+|||.+....++.++|.|||||++|||+.|..||....
T Consensus 190 FAK~v~~r--------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 190 FAKRVSGR--------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN 245 (355)
T ss_pred ceEEecCc--------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence 99877443 234789999999999999999999999999999999999999997643
No 39
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=328.40 Aligned_cols=282 Identities=26% Similarity=0.351 Sum_probs=214.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc--CCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI--RHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
..+..+.+.||+|.||+||+|.+. |+.||||++...++ +.+.+|.++++.+ +|+||..|++.-.. +...-..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~-~~gs~TQ 283 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNK-DNGSWTQ 283 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhcccc-CCCceEE
Confidence 456788899999999999999997 55899999975444 5677888888876 99999999986322 1122345
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEeccCCCCceEeCCCCCeEE
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHH-----CQPPIVHGDLKPSNVLLDHDMVAHV 854 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dikp~Nill~~~~~~kl 854 (1003)
.++|++|.+.|||+||+.++ .++.....+++..+|.||+|||.. .+|.|.|||||++||||..++.+.|
T Consensus 284 LwLvTdYHe~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEEeeecccCCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 78999999999999999863 588899999999999999999964 5789999999999999999999999
Q ss_pred cccccccccccCCccccCcccccccccccccCccccCCCC----C--CccccchhHHHHHHHHHhCCCCCCcccCCcchh
Q 001858 855 SDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN----V--SLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTL 928 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~ 928 (1003)
+|+|+|....... ..........+||.+|||||++...- + -..+||||||.|+||+.....--+-...-...+
T Consensus 358 ADLGLAv~h~~~t-~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 358 ADLGLAVRHDSDT-DTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred eeceeeEEecccC-CcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 9999998765432 22333444578999999999987642 1 235999999999999987432211111111111
Q ss_pred hHHHHhhCc-hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 929 HGFVKMALP-EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 929 ~~~~~~~~~-~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
.++++...+ +++.+++...-.....+.++...++...+.++|+.||..+|+.|.|+--+.+.+.++.+
T Consensus 437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 222222222 34555555444444445677778889999999999999999999999999999988764
No 40
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-38 Score=323.68 Aligned_cols=250 Identities=23% Similarity=0.387 Sum_probs=212.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
..+|++.+.||+|.||.|-+|.....|+.||||.+++.. +++.-.+.+|++||+.++||||++++.+ |++.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCc
Confidence 357889999999999999999998899999999997543 4445578899999999999999999998 77888
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
...+||||..+|.|+||+.. .+.+++.+++.+++||..|+.|+|.+ +++|||+|.+|||+|+++++||+|||
T Consensus 127 KIvivMEYaS~GeLYDYiSe-----r~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYISE-----RGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred eEEEEEEecCCccHHHHHHH-----hccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 89999999999999999998 56899999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCC-CccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNV-SLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
++-.+.+. ..-..++|++-|.+||...+.+| ++.+|-||+|+++|-++.|..||++.+-
T Consensus 199 LSNly~~~------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-------------- 258 (668)
T KOG0611|consen 199 LSNLYADK------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-------------- 258 (668)
T ss_pred hhhhhccc------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--------------
Confidence 99876443 34456899999999999999888 4789999999999999999999987431
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
..+..-+.......|.. +....-++++++..+|++|.|+.+|..|-+
T Consensus 259 k~lvrQIs~GaYrEP~~--------PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 259 KRLVRQISRGAYREPET--------PSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HHHHHHhhcccccCCCC--------CchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 12333344444444422 234456788999999999999999987743
No 41
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=346.97 Aligned_cols=262 Identities=28% Similarity=0.429 Sum_probs=210.8
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCc---e-EEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLL---P-VAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSID 773 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 773 (1003)
..++-.+.++||+|+||+||+|+....+. . ||||..+.. .....++|.+|+++++.++|||||+++|++
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa---- 230 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA---- 230 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE----
Confidence 34555667999999999999999865322 3 899998842 355678999999999999999999999995
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeE
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 853 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~k 853 (1003)
..+...++|||++.||+|.+++++.. +.++..+...++.+.|.||+|||+. +++||||.++|+|++.++.+|
T Consensus 231 -~~~~Pl~ivmEl~~gGsL~~~L~k~~----~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 231 -VLEEPLMLVMELCNGGSLDDYLKKNK----KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred -cCCCccEEEEEecCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEE
Confidence 44677899999999999999999853 3699999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHH
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFV 932 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~ 932 (1003)
|+|||+++.-.. +.... ....-+.+|+|||.+..+.+++++|||||||++||+++ |..||.++...
T Consensus 303 ISDFGLs~~~~~--~~~~~---~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-------- 369 (474)
T KOG0194|consen 303 ISDFGLSRAGSQ--YVMKK---FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-------- 369 (474)
T ss_pred eCccccccCCcc--eeecc---ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--------
Confidence 999999975321 11111 01135689999999999999999999999999999999 89998875432
Q ss_pred HhhCchhHHHHH-HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhhh
Q 001858 933 KMALPEKVMEIV-DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKYK 999 (1003)
Q Consensus 933 ~~~~~~~~~~~i-~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~~ 999 (1003)
++...+ ........ ....+..+..++.+||..+|++||+|.++.+.++.+.+...
T Consensus 370 ------~v~~kI~~~~~r~~~------~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 370 ------EVKAKIVKNGYRMPI------PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ------HHHHHHHhcCccCCC------CCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 222222 21211111 11345677888889999999999999999999999887655
No 42
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-38 Score=329.38 Aligned_cols=280 Identities=24% Similarity=0.290 Sum_probs=210.0
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc--CCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI--RHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
......+.+|+|+||.||+|... ++.||||++.... .+.|++|-+|++.. +|+||++|+++-...+.. ...+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc--CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 34556789999999999999996 4799999997543 36788888888765 899999999984443322 5578
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------CCCCcEeccCCCCceEeCCCCCeEE
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHH------CQPPIVHGDLKPSNVLLDHDMVAHV 854 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------~~~~ivH~Dikp~Nill~~~~~~kl 854 (1003)
++|+||.+.|+|.+|++.+ .++|....+++..+++||+|||+. .+|+|+|||||++||||..|+++.|
T Consensus 284 wLVt~fh~kGsL~dyL~~n------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI 357 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI 357 (534)
T ss_pred eEEeeeccCCcHHHHHHhc------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence 9999999999999999974 589999999999999999999976 3689999999999999999999999
Q ss_pred cccccccccccCCccccCcccccccccccccCccccCCCC-C-----CccccchhHHHHHHHHHhCCCCCCcccCCc--c
Q 001858 855 SDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN-V-----SLTGDVYSFGILLLEMFTGRRPTHTMFNDG--L 926 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-----~~~sDvwslG~il~ell~g~~P~~~~~~~~--~ 926 (1003)
+|||+|..+.+.. .......-+||.+|||||++.+.. + -.+.||||+|.|+|||++...-+.....++ .
T Consensus 358 aDFGLAl~~~p~~---~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yql 434 (534)
T KOG3653|consen 358 ADFGLALRLEPGK---PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQL 434 (534)
T ss_pred eccceeEEecCCC---CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccC
Confidence 9999998886432 222233478999999999987752 1 235899999999999999766543222222 2
Q ss_pred hhhHHHHhhC-chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 927 TLHGFVKMAL-PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 927 ~~~~~~~~~~-~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
.+...+.... -+++++.+-+.-....-...+........+.+.+..||+.||+.|.|+.=+-+++.++..-
T Consensus 435 pfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 435 PFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred chhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 2222233222 2345544433222211112222234556788899999999999999999999988876543
No 43
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-38 Score=322.88 Aligned_cols=271 Identities=24% Similarity=0.321 Sum_probs=205.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
-.|+-.+++|.|+||.||+|...++++.||||+.-..... -.+|+++|+++.|||||++.-++......+.-+..+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 3567779999999999999999999999999987533221 236999999999999999998876644333456779
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC-CCeEEccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLAK 861 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~DfG~a~ 861 (1003)
|||||+. +|.++++..... +..++...++-+.+|+++|++|||+. +|+||||||+|+|+|.+ |.+||||||.|+
T Consensus 100 VleymP~-tL~~~~r~~~~~-~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRA-NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHhchH-HHHHHHHHHhhc-CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 9999988 999999864333 45788888999999999999999998 99999999999999976 899999999999
Q ss_pred ccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
.+..+. ....+..|..|.|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.. +..++...++..-.+.
T Consensus 175 ~L~~~e------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIik~lG~Pt- 246 (364)
T KOG0658|consen 175 VLVKGE------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEIIKVLGTPT- 246 (364)
T ss_pred eeccCC------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHHHHhCCCC-
Confidence 875432 22446789999999998875 79999999999999999999999998743 3333333333221111
Q ss_pred HHHHHhhcc-----cCCCCchh-----hHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALL-----LDPGNERA-----KIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~-----~~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+.+..+-. ..|.-... .......+..+++.++++++|.+|.++.|++.+
T Consensus 247 ~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 247 REDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 111111110 01111110 122345678899999999999999999999864
No 44
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=310.71 Aligned_cols=255 Identities=22% Similarity=0.338 Sum_probs=207.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.++|++-+.||+|+|+.||++.+..+|+.+|+|++.... ....+.+.+|++|.+.++||||+++.+. +....+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcccce
Confidence 467888999999999999999999999999999986332 3356889999999999999999999987 566788
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC---CCCeEEcc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHVSD 856 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~D 856 (1003)
.|+|+|+|+|++|..-|-.. ..+++..+-.+..||++|+.|+|.+ +|||||+||+|+++.. ...+|++|
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~ 156 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLAD 156 (355)
T ss_pred eEEEEecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecc
Confidence 89999999999998777652 4678888999999999999999999 9999999999999953 44699999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
||+|..+.+ .....+++|||+|||||++...+|+..+|||+.||++|-++.|++||.+....
T Consensus 157 FGvAi~l~~------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~------------ 218 (355)
T KOG0033|consen 157 FGLAIEVND------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------------ 218 (355)
T ss_pred cceEEEeCC------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH------------
Confidence 999987752 23344678999999999999999999999999999999999999999874321
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
++.++..+.+.....+.+....++..+++++|+..||++|.|+.|.++|=+
T Consensus 219 -----rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 219 -----RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred -----HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 122222222222222333444566778888999999999999999887643
No 45
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.4e-37 Score=345.62 Aligned_cols=276 Identities=21% Similarity=0.264 Sum_probs=205.4
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.++||+|+||.||+|++..+++.||||+++.. .......+.+|++++++++||||+++++++......+....+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 588899999999999999999999999999998632 223345788999999999999999999987544334445689
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||++ ++|.+++.. ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 81 VVFELME-SDLHQVIKA-----NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEecCC-CCHHHHHHh-----cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 9999996 599999876 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCC--CCCCccccchhHHHHHHHHHhCCCCCCcccCCcch-h-hHHHHhhC-
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMG--GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLT-L-HGFVKMAL- 936 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~-~-~~~~~~~~- 936 (1003)
........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... . ........
T Consensus 152 ~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 152 VAFNDTPT--AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP 229 (338)
T ss_pred ccccccCc--cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 54322111 111233568999999998765 67899999999999999999999999754321100 0 00000000
Q ss_pred -------chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 -------PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 -------~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.....+.........+.............+.+++.+|++.+|++||+++|++++
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 111112222222222211111112234567899999999999999999999976
No 46
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=372.00 Aligned_cols=471 Identities=28% Similarity=0.362 Sum_probs=258.8
Q ss_pred cCccccCCCCCcEEEcCCCCCCCCCchh-hcccccCcEEEecccccccccCccCcCCCCCceeecccccccCCCCccccc
Q 001858 92 LSPYVGNLSFLRFINLASNNLHGEIPNE-LGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAYIGY 170 (1003)
Q Consensus 92 ~~~~l~~l~~L~~L~L~~n~~~g~ip~~-l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~ 170 (1003)
||..+..=..|+.|+++.|-+- ..|-+ +.+..+|+.||||+|.++ ..|..|..+.+|+.|.+++|.+.
T Consensus 13 ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~--------- 81 (1081)
T KOG0618|consen 13 IPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR--------- 81 (1081)
T ss_pred cchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh---------
Confidence 4444443334555666665554 33322 233334666666666655 55555555555555555555554
Q ss_pred cccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCCcccCCchhHHh
Q 001858 171 YWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFNISSLEQIS 250 (1003)
Q Consensus 171 ~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ 250 (1003)
..|.+++++.+|++|.|.+|++. ..|.++..+++|++|+++.|++...++.+..+..++.+.
T Consensus 82 -----------------~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~ 143 (1081)
T KOG0618|consen 82 -----------------SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELA 143 (1081)
T ss_pred -----------------hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccCCCchhHHhhhHHHHHh
Confidence 44555555555555555555555 455555555556666666665555555555555555555
Q ss_pred hcccccCCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCC
Q 001858 251 LLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLG 330 (1003)
Q Consensus 251 l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 330 (1003)
.++|.....++ -..++.+++..|.+.+.++..+..++. .|||++|.+. ...+..+++|+.|....|++.
T Consensus 144 ~s~N~~~~~lg------~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls 212 (1081)
T KOG0618|consen 144 ASNNEKIQRLG------QTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLS 212 (1081)
T ss_pred hhcchhhhhhc------cccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccc
Confidence 55552111121 112555666666666555555555544 5666666655 223455556666666666665
Q ss_pred CCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEccccccccc
Q 001858 331 SGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGT 410 (1003)
Q Consensus 331 ~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 410 (1003)
.+... .++|+.|+.++|.++...+. ..-.+|+++++++|+++ .+|++++.+.+|+.++..+|+++ .
T Consensus 213 ~l~~~----------g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~ 278 (1081)
T KOG0618|consen 213 ELEIS----------GPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-A 278 (1081)
T ss_pred eEEec----------CcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-h
Confidence 54332 24566666666665521111 11235666666666666 33466666666666666666664 5
Q ss_pred CCCccccccccceeccccccccccccccccCCCccceeecccccccccCCc-cccCCCC-CCeeeccCccccCCCchhhh
Q 001858 411 IPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPS-SLGNCKN-LMLLNVSKNKLTGTLPPQIL 488 (1003)
Q Consensus 411 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~-L~~L~ls~N~l~~~~p~~~~ 488 (1003)
+|..+...++|+.|.+..|.+. -+|+...+++.|++|+|..|+|. ..|+ .+.-... |+.|+.+.|++. ..|..-.
T Consensus 279 lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e 355 (1081)
T KOG0618|consen 279 LPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEE 355 (1081)
T ss_pred hHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhcccc-ccccccc
Confidence 5666666666666666666665 45555555666666666666666 3333 2222222 555666666665 4443322
Q ss_pred hhccccccccCCCCccccccccccccccccccccccccccccccC-ccccCcccccEEEecCCCccccCCcccccccCcC
Q 001858 489 EITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIP-TTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIE 567 (1003)
Q Consensus 489 ~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 567 (1003)
...+.++.|.+.+|.++...-..+.+.++|+.|+|++|+|. .+| ..+.++..|++|+||+|+++ .+|..+.+++.|+
T Consensus 356 ~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~ 433 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLH 433 (1081)
T ss_pred hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhH
Confidence 33334445566666666555555666666666666666665 334 35556666666666666666 5666666666666
Q ss_pred eeeccCceeccCCcccccCCCccceEecCCCccccc-CCCCCccCCCcceeeccCCC
Q 001858 568 VLDLSCNNLSGQIPEYLEDLSFLEYLNLSYNDFEGQ-VPTKGVFSNKTRISLIENGK 623 (1003)
Q Consensus 568 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~-~p~~~~~~~~~~~~~~~n~~ 623 (1003)
+|...+|+|. ..| .+..++.|+.+|+|.|+|+.. +|.....+++..+.+.||.+
T Consensus 434 tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 434 TLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred HHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 6666666666 445 556666666666666666542 23222334555666666665
No 47
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-37 Score=300.98 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=214.7
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
+.++|++++.||+|.||.||.|+.+.++-.||+|++.+.. .+..+++.+|+++-+.++||||.+++++ |.+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~-----fhd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY-----FHDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh-----eecc
Confidence 3468999999999999999999999999999999986443 3446789999999999999999999999 6788
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...|+++||..+|++...++..+ ...+++...+.+..|+|.|+.|+|.. +|+||||||+|+|++.++..|++||
T Consensus 95 ~riyLilEya~~gel~k~L~~~~---~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR---MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc---cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCC
Confidence 89999999999999999999654 55788999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
|-+... ........+||..|.|||...+...+..+|+|++|++.||++.|..||.....
T Consensus 169 GwsV~~-------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-------------- 227 (281)
T KOG0580|consen 169 GWSVHA-------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-------------- 227 (281)
T ss_pred Cceeec-------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--------------
Confidence 998643 23445568899999999999999999999999999999999999999976431
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
.+...-+.+.-...| ........+++.+|+..+|.+|.+..|++.+-.
T Consensus 228 ~etYkrI~k~~~~~p-------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 228 SETYKRIRKVDLKFP-------STISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred HHHHHHHHHccccCC-------cccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 112222232333333 223456778888999999999999999998754
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.2e-37 Score=335.67 Aligned_cols=253 Identities=24% Similarity=0.311 Sum_probs=201.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.|+..+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|+++++.++|++++++++++ .+++..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeE
Confidence 3778899999999999999999899999999986432 22335678999999999999999999884 456678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++|+|.+++.... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred EEEEEecCCCcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 99999999999998886533 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
....... ......||..|+|||++.+..++.++||||+||++|||++|+.||........
T Consensus 150 ~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-------------- 209 (285)
T cd05631 150 VQIPEGE------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-------------- 209 (285)
T ss_pred EEcCCCC------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh--------------
Confidence 7653221 11235689999999999999999999999999999999999999975432110
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-----MADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~ 990 (1003)
.+.+.......+. .........+.+++.+||+.+|++||+ ++|++++
T Consensus 210 ~~~~~~~~~~~~~---~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 210 REEVDRRVKEDQE---EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HHHHHHHhhcccc---cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0111111111110 111223456788999999999999997 8888875
No 49
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2e-36 Score=330.10 Aligned_cols=250 Identities=20% Similarity=0.309 Sum_probs=200.0
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEeccccccc---hHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS---IKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
..||+|++|.||+|.+ +++.||||+++...... .+.|.+|++++++++||||+++++++... ..+....++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEEE
Confidence 6799999999999998 47799999997544333 56788999999999999999999986431 123456789999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
|+++|+|.+++.. .+.+++.....++.+++.|++|+|+.. +++||||||+||+++.++.+|++|||+++....
T Consensus 103 y~~~g~L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 103 YCTRGYLREVLDK-----EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSS 175 (283)
T ss_pred eCCCCcHHHHHhh-----CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence 9999999999986 346889999999999999999999732 788999999999999999999999999976532
Q ss_pred CCccccCcccccccccccccCccccCC--CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH-
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMG--GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME- 942 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~- 942 (1003)
.. ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... ++.+
T Consensus 176 ~~--------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--------------~~~~~ 233 (283)
T PHA02988 176 PP--------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--------------EIYDL 233 (283)
T ss_pred cc--------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--------------HHHHH
Confidence 21 12458899999999876 67899999999999999999999999754211 1111
Q ss_pred HHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 943 IVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 943 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
++..... + .....++..+.+++.+||+.+|++||+++|+++.|+.++.
T Consensus 234 i~~~~~~--~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 234 IINKNNS--L----KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHhcCCC--C----CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1111111 1 0111345678899999999999999999999999998764
No 50
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.1e-37 Score=343.05 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=204.3
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++ .+.+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCE
Confidence 46899999999999999999999899999999997442 23456788999999999999999999884 45677
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.. .+.+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~ 147 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNN-----LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGL 147 (333)
T ss_pred EEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcC
Confidence 8999999999999999976 35688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
+..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.
T Consensus 148 a~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~------------- 206 (333)
T cd05600 148 SKGIVT--------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET------------- 206 (333)
T ss_pred Cccccc--------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-------------
Confidence 975432 12235699999999999999999999999999999999999999975322110
Q ss_pred HHHHHHh-hcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 940 VMEIVDF-ALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 940 ~~~~i~~-~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...+... .....|... .........+.+++.+|+..+|++||+++|++++
T Consensus 207 ~~~i~~~~~~~~~~~~~-~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 207 WENLKYWKETLQRPVYD-DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHhccccccCCCCC-ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0011000 000111110 0002335667889999999999999999999986
No 51
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-38 Score=302.58 Aligned_cols=275 Identities=21% Similarity=0.276 Sum_probs=218.0
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
..++|++.+.+|+|+|+-||.++.-.+++.||+|++.....++.+..++|++..++++|||++++++++....-......
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45789999999999999999999988999999999987777778899999999999999999999998755444456678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
|++++|+..|+|.+.++..... +..+++.++++|+.++++|+++||+. .++++||||||.||++++++.+++.|||.+
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~k-g~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIK-GNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEeehhccccHHHHHHHHhhc-CCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 9999999999999999886543 45899999999999999999999998 335999999999999999999999999999
Q ss_pred cccccCCccc----cCcccccccccccccCccccC---CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH
Q 001858 861 KFLFDRPIQE----TSSSSIGIKGTVGYVAPEYGM---GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 861 ~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~ 933 (1003)
+...-..... .-........|..|.|||.+. +...+.++||||+||++|+|+.|..||+.....+..+.-.+.
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~ 256 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQ 256 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeee
Confidence 7653211000 001112234789999999764 346789999999999999999999999865443322211100
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
. .-..-|.. ...++.+.+++.+|++.||.+||++.+++.++..+
T Consensus 257 -----------n-~q~s~P~~-----~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 257 -----------N-AQISIPNS-----SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----------c-cccccCCC-----CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 0 00011111 11467889999999999999999999999998765
No 52
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=6e-37 Score=309.04 Aligned_cols=272 Identities=24% Similarity=0.304 Sum_probs=207.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.++|+..+.|++|+||.||+|+++.+++.||+|+++.+. .+-.-.-.+|+.++.+.+|||||.+-.+... .+-+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG---~~~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVG---SNMDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEec---cccce
Confidence 357888999999999999999999999999999998544 3334466899999999999999999988643 23456
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.|+||||++. +|..++.... .++...++.-+..|+++|++|||.+ .|+|||+||+|+|++..|.+||+|||+
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccch
Confidence 8999999998 9999998863 5789999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh---
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA--- 935 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~--- 935 (1003)
|+.+... ....+..+.|.+|.|||.+.+. .|+.+.|+||+|||+.||+++++-|.+...-+ ++...+...
T Consensus 224 AR~ygsp-----~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d-Ql~~If~llGtP 297 (419)
T KOG0663|consen 224 AREYGSP-----LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID-QLDKIFKLLGTP 297 (419)
T ss_pred hhhhcCC-----cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH-HHHHHHHHhCCC
Confidence 9987543 2334457789999999998875 68999999999999999999999887643221 111111110
Q ss_pred ---CchhHHH--HHH-hhcccCC-CCchhhHHH--HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 ---LPEKVME--IVD-FALLLDP-GNERAKIEE--CLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ---~~~~~~~--~i~-~~l~~~~-~~~~~~~~~--~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.+...+ .+. ......| .+-+..... ..+.-++++...+.+||.+|.|+.|.++|
T Consensus 298 te~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 298 SEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1111111 010 0000111 111111111 33566788889999999999999999875
No 53
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=334.96 Aligned_cols=252 Identities=22% Similarity=0.281 Sum_probs=214.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc-
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF- 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~- 779 (1003)
++|...+++|+|+||.++.++++.+++.|++|.+.... .......++|+.++++++|||||.+.+. |..++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds-----~~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDS-----FEEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccc-----hhcCCce
Confidence 57899999999999999999999999999999997543 3344578999999999999999999998 455555
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||+|++||++.+.|.+.+ +..+++..+..++.|++.|+.|||+. .|+|||||+.||+++.++.+|+.|||+
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhh
Confidence 999999999999999999876 56899999999999999999999998 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
|+.+.+.. .....++||+.||+||.+.+.+|+.|+|+||+||++|||++-+++|.....
T Consensus 153 aK~l~~~~-----~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m---------------- 211 (426)
T KOG0589|consen 153 AKILNPED-----SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM---------------- 211 (426)
T ss_pred hhhcCCch-----hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch----------------
Confidence 99875432 233457899999999999999999999999999999999999999976432
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..++.+..... ..+.......++..++..|++.+|+.||++.+++.+
T Consensus 212 -~~Li~ki~~~~---~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 212 -SELILKINRGL---YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -HHHHHHHhhcc---CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 22222222221 112234456788999999999999999999999986
No 54
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9e-37 Score=334.75 Aligned_cols=247 Identities=25% Similarity=0.320 Sum_probs=201.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||++++++ +.++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWT-----EHDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhh-----hccCCe
Confidence 36889999999999999999999899999999986432 2234678899999999999999999987 456778
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.. .+.+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRN-----SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred EEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCc
Confidence 8999999999999999987 34688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
++...+. .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .
T Consensus 148 ~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--------------~ 205 (291)
T cd05612 148 AKKLRDR--------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--------------G 205 (291)
T ss_pred chhccCC--------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------------H
Confidence 9765321 11346899999999999988999999999999999999999998653211 1
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-----MADAVKNL 991 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~L 991 (1003)
..+.+......-+ ......+.+++.+|++.||.+||+ ++|+++|-
T Consensus 206 ~~~~i~~~~~~~~-------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 206 IYEKILAGKLEFP-------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred HHHHHHhCCcCCC-------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 1111111111111 112346788999999999999995 88888764
No 55
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.6e-36 Score=335.44 Aligned_cols=267 Identities=21% Similarity=0.357 Sum_probs=201.0
Q ss_pred hccCCccCeeeeccceEEEEEEECC----------------CCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCcee
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE----------------DLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIK 764 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 764 (1003)
.++|++.++||+|+||.||+|.+.. ++..||+|++.... .....+|.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3678999999999999999998642 34479999987543 223567999999999999999999
Q ss_pred EeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 001858 765 IITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQ--------------VDGNLNLIQRLNISIDVASAIEYLHHHC 830 (1003)
Q Consensus 765 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 830 (1003)
+++++. +.+..++||||+++|+|.+++...... ....+++.+++.++.|++.|++|||+.
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~- 157 (304)
T cd05096 84 LLGVCV-----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL- 157 (304)
T ss_pred EEEEEe-----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence 999853 456689999999999999999764211 123578889999999999999999999
Q ss_pred CCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHH
Q 001858 831 QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLE 910 (1003)
Q Consensus 831 ~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~e 910 (1003)
+|+||||||+||+++.++.+||+|||+++.+...... .......++..|+|||++.++.++.++|||||||++||
T Consensus 158 --~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 232 (304)
T cd05096 158 --NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY---RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWE 232 (304)
T ss_pred --CccccCcchhheEEcCCccEEECCCccceecccCcee---EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHH
Confidence 9999999999999999999999999999765432211 11122346789999999988899999999999999999
Q ss_pred HHh--CCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 001858 911 MFT--GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAV 988 (1003)
Q Consensus 911 ll~--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~ 988 (1003)
|++ +..||......+ .. +............. .......++..+.+++.+||+.+|++||++.||.
T Consensus 233 l~~~~~~~p~~~~~~~~--~~--------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 233 ILMLCKEQPYGELTDEQ--VI--------ENAGEFFRDQGRQV---YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred HHHccCCCCCCcCCHHH--HH--------HHHHHHhhhccccc---cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 987 566776532211 00 00111111000000 0000112346788999999999999999999998
Q ss_pred HHHH
Q 001858 989 KNLC 992 (1003)
Q Consensus 989 ~~L~ 992 (1003)
+.|+
T Consensus 300 ~~l~ 303 (304)
T cd05096 300 AFLT 303 (304)
T ss_pred HHHh
Confidence 8875
No 56
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.6e-36 Score=337.75 Aligned_cols=243 Identities=23% Similarity=0.308 Sum_probs=197.2
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999997432 23346788999999999999999999884 45678899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
|+++|+|.+++.. .+.+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 76 ~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 147 (323)
T cd05571 76 YANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred CCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCccccc
Confidence 9999999999986 45789999999999999999999999 999999999999999999999999999975321
Q ss_pred CCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHH
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVD 945 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 945 (1003)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... +.....+.
T Consensus 148 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------------~~~~~~~~ 208 (323)
T cd05571 148 D-----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------------EKLFELIL 208 (323)
T ss_pred C-----CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--------------HHHHHHHH
Confidence 1 1122345699999999999999999999999999999999999999964221 01111111
Q ss_pred hhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 946 FALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
..... ........+.+++.+|++.+|++|| ++.|+++|
T Consensus 209 ---~~~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 209 ---MEEIR----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred ---cCCCC----CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 11110 0112345678899999999999999 79998865
No 57
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.3e-36 Score=333.24 Aligned_cols=271 Identities=21% Similarity=0.290 Sum_probs=203.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++ ..++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 46899999999999999999999999999999987432 23356788999999999999999999884 456788
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||++++.+..+... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~ 147 (287)
T cd07848 76 YLVFEYVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFA 147 (287)
T ss_pred EEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCc
Confidence 999999998776655433 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhh-HHHHhhCchh
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLH-GFVKMALPEK 939 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~-~~~~~~~~~~ 939 (1003)
........ .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.... .......+..
T Consensus 148 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 223 (287)
T cd07848 148 RNLSEGSN----ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAE 223 (287)
T ss_pred cccccccc----ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHH
Confidence 86532211 112235689999999999988899999999999999999999999976432211000 0001111111
Q ss_pred HHHHHHhh--c--ccCCCC------chhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 940 VMEIVDFA--L--LLDPGN------ERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 940 ~~~~i~~~--l--~~~~~~------~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
........ . ...+.. ...........+.+++.+|++.+|++||+++|+++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 224 QMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11110000 0 000000 001112245678999999999999999999999875
No 58
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=338.89 Aligned_cols=247 Identities=23% Similarity=0.310 Sum_probs=202.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++ .+++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDEN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcCC
Confidence 357899999999999999999999999999999987432 23456789999999999999999999984 4567
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||+++|+|.+++.. .+.+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRK-----AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred EEEEEEcCCCCChHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeecc
Confidence 88999999999999999987 35688999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
+++...+.. ....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .
T Consensus 164 ~~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------------~ 221 (329)
T PTZ00263 164 FAKKVPDRT--------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--------------F 221 (329)
T ss_pred CceEcCCCc--------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--------------H
Confidence 997653221 135689999999999999999999999999999999999999864321 0
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-----MADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~ 990 (1003)
...+.+......-| ......+.+++.+|++.+|++||+ ++|+++|
T Consensus 222 ~~~~~i~~~~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 222 RIYEKILAGRLKFP-------NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHHHHhcCCcCCC-------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11111111111111 112345778999999999999996 6888766
No 59
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-37 Score=331.21 Aligned_cols=255 Identities=26% Similarity=0.443 Sum_probs=219.1
Q ss_pred CCccCeeeeccceEEEEEEECC----CCceEEEEEeccc-cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGE----DLLPVAVKVINLK-QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
....++||+|-||.||+|.+.. ....||||.-+.. ..+..+.|..|+.+++.++||||++++|+|. +..
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~------e~P 464 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV------EQP 464 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee------ccc
Confidence 3456789999999999998842 3346889988753 3445788999999999999999999999985 345
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|||.++.|.|..|++..+ ..++......++.||+.|++|||+. .+|||||..+||||....-+|++|||+
T Consensus 465 ~WivmEL~~~GELr~yLq~nk----~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNK----DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred eeEEEecccchhHHHHHHhcc----ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccch
Confidence 699999999999999999864 5688889999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
++.+.+..+...+. ..=++.|||||-+.-..++.++|||.|||++||++. |..||.+..+.+..
T Consensus 538 SR~~ed~~yYkaS~----~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI----------- 602 (974)
T KOG4257|consen 538 SRYLEDDAYYKASR----GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI----------- 602 (974)
T ss_pred hhhccccchhhccc----cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-----------
Confidence 99998776554432 234678999999999999999999999999999998 99999987665332
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
.....++|.+.++.|+..++.++-+||.++|.+||.+.|+...|..+.+
T Consensus 603 ---------~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 ---------GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ---------EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 2334556778888999999999999999999999999999999988776
No 60
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.3e-36 Score=337.76 Aligned_cols=268 Identities=22% Similarity=0.327 Sum_probs=207.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.++|++.+.||+|+||.||+|++..++..||+|++..... ...+.+.+|++++++++||||+++++++ ..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EECCEE
Confidence 4689999999999999999999999999999999975432 3346799999999999999999999985 345678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++++|.+++.. ...+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||++
T Consensus 79 ~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 151 (331)
T cd06649 79 SICMEHMDGGSLDQVLKE-----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVS 151 (331)
T ss_pred EEEeecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccc
Confidence 999999999999999986 346889999999999999999999852 6999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-----
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA----- 935 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~----- 935 (1003)
...... ......||..|+|||++.+..++.++||||+||++|||++|+.||......+ +.......
T Consensus 152 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~ 222 (331)
T cd06649 152 GQLIDS-------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGE 222 (331)
T ss_pred cccccc-------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccc
Confidence 755321 1123468999999999999999999999999999999999999996532211 10000000
Q ss_pred -------------------------C-chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 001858 936 -------------------------L-PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 936 -------------------------~-~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~ 989 (1003)
. .....+..+......+.... ......++.+++.+||+.+|++||++.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 223 EGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP--NGVFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred cCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCC--CccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 00011111111111111100 1123567899999999999999999999998
Q ss_pred HHH
Q 001858 990 NLC 992 (1003)
Q Consensus 990 ~L~ 992 (1003)
+-.
T Consensus 301 h~~ 303 (331)
T cd06649 301 HTF 303 (331)
T ss_pred ChH
Confidence 753
No 61
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.1e-37 Score=316.23 Aligned_cols=279 Identities=23% Similarity=0.322 Sum_probs=208.5
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCC-ceeEeeeeeecc-cCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRN-LIKIITVCSSID-FKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~-~~~~ 777 (1003)
...|...++||+|+||+||+|+.+.+|+.||+|+++...+ +......+|+.++++++|+| |+++.+++.... +...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3456777889999999999999999999999999985543 45678899999999999999 999999975432 2233
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++|+||++. +|.+++....... ..++...+..++.|++.|++|||++ +|+||||||+||+++++|.+||+||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 478899999987 9999998865321 4577788999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|+|+...- ........++|.+|.|||++.+. .|+...||||+|||++||++++.-|.+....++-...+--...
T Consensus 165 GlAra~~i-----p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGt 239 (323)
T KOG0594|consen 165 GLARAFSI-----PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGT 239 (323)
T ss_pred chHHHhcC-----CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCC
Confidence 99986531 12224456799999999999887 7899999999999999999999888775432211111110001
Q ss_pred c-h-hH---HHHHHhh--cccC--CCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 P-E-KV---MEIVDFA--LLLD--PGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~-~-~~---~~~i~~~--l~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
| + .+ ....+-. .... +..-............+++.+|++++|.+|.|++++++|
T Consensus 240 P~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 240 PNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1 0 01 1111100 0000 000011111112367889999999999999999999987
No 62
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.1e-39 Score=347.23 Aligned_cols=385 Identities=25% Similarity=0.392 Sum_probs=235.0
Q ss_pred CCCCcEEEcCCCCCC-CCCchhhcccccCcEEEecccccccccCccCcCCCCCceeecccccccCCCCccccccccccce
Q 001858 99 LSFLRFINLASNNLH-GEIPNELGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLEN 177 (1003)
Q Consensus 99 l~~L~~L~L~~n~~~-g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~ 177 (1003)
|+..|-.|+++|.|+ +..|.....+++++.|.|...++. .+|+.++.|.+|++|.+++|++. .+-.++..+ +.|+.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~L-p~LRs 82 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDL-PRLRS 82 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccc-hhhHH
Confidence 455566677777776 356777777777777777777776 67777777777777666666665 222222221 44455
Q ss_pred EEccCcccc-cccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCCcccCCchhHHhhccccc
Q 001858 178 LNVAENQLT-GQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFNISSLEQISLLTNRF 256 (1003)
Q Consensus 178 L~L~~n~l~-~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l 256 (1003)
+++..|++. .-||+.|-.|..|..||||+|+++ +.|..+..-+++-.|+||+|+|.
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie---------------------- 139 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE---------------------- 139 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc----------------------
Confidence 555555443 236666667777777777777777 66777776667777777777666
Q ss_pred CCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCC
Q 001858 257 EGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGD 336 (1003)
Q Consensus 257 ~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 336 (1003)
.||..++.+++.|-+|+|++|++. .+|..+..+..|+.|+|++|.+...--..+-
T Consensus 140 --tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP---------------------- 194 (1255)
T KOG0444|consen 140 --TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLP---------------------- 194 (1255)
T ss_pred --cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCc----------------------
Confidence 566666667888888888888887 6677788888888888888877632222222
Q ss_pred hhhHhhhcCCCCCcEeeccCcCCC-CCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCcc
Q 001858 337 LDFITLLTNCSKLETLGLNSNRFG-GSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTI 415 (1003)
Q Consensus 337 ~~~~~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 415 (1003)
.+++|++|.+++.+=+ ..+|.++..+.+|..+|++.|.+. ..|+++.++++|+.|+||+|+|+ .+.-..
T Consensus 195 --------smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~ 264 (1255)
T KOG0444|consen 195 --------SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTE 264 (1255)
T ss_pred --------cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccH
Confidence 2344455555543322 134555555555555555555554 44555555555555555555555 333333
Q ss_pred ccccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCCeeeccCccccCCCchhhhhhccccc
Q 001858 416 GELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLSS 495 (1003)
Q Consensus 416 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~ 495 (1003)
+... +|++|+||.|+++ .+|++++.+++|+.|.+.+|+++
T Consensus 265 ~~W~------------------------~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~--------------- 304 (1255)
T KOG0444|consen 265 GEWE------------------------NLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT--------------- 304 (1255)
T ss_pred HHHh------------------------hhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc---------------
Confidence 3444 4455555555554 45555555555555555555554
Q ss_pred cccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCce
Q 001858 496 LLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNN 575 (1003)
Q Consensus 496 ~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 575 (1003)
+ .-+|..++.+.+|+.+..++|++. .+|+.++.+..|+.|.|++|++. .+|+++.-|+.|+.|||.+|.
T Consensus 305 --------F-eGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 305 --------F-EGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred --------c-cCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 0 024445677777777777777776 77777777778888888888776 677788778888888888876
Q ss_pred eccCCcccccCCCccceEec
Q 001858 576 LSGQIPEYLEDLSFLEYLNL 595 (1003)
Q Consensus 576 l~~~~p~~l~~l~~L~~L~l 595 (1003)
=--.+|.--..-++|+.-++
T Consensus 374 nLVMPPKP~da~~~lefYNI 393 (1255)
T KOG0444|consen 374 NLVMPPKPNDARKKLEFYNI 393 (1255)
T ss_pred CccCCCCcchhhhcceeeec
Confidence 44333322222244554444
No 63
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.9e-36 Score=330.06 Aligned_cols=274 Identities=20% Similarity=0.314 Sum_probs=202.8
Q ss_pred ccCCccCeeeeccceEEEEEEECC-CCceEEEEEecccc--ccchHHHHHHHHHHHhc---CCCCceeEeeeeeecccCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGE-DLLPVAVKVINLKQ--KGSIKSFVAECEALKNI---RHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~ 776 (1003)
.+|++.+.||+|+||+||+|++.. +++.||+|+++... ......+.+|+.+++.+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 368999999999999999999854 46789999987433 22345667788777766 6999999999986544455
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
....++||||++ ++|.+++.... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcc
Confidence 677899999997 59999997643 34589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA- 935 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~- 935 (1003)
||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+.......
T Consensus 154 fg~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~ 226 (290)
T cd07862 154 FGLARIYSFQ------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIG 226 (290)
T ss_pred ccceEeccCC------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhC
Confidence 9999765322 11223568999999999988899999999999999999999999997643221 111111100
Q ss_pred --CchhHHHHH---HhhcccCCCCc-hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 --LPEKVMEIV---DFALLLDPGNE-RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 --~~~~~~~~i---~~~l~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+++..... .......+... ..........+.+++.+|++.+|++||++.|+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 227 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred CCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 011110000 00111111010 11112334567899999999999999999999864
No 64
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=334.71 Aligned_cols=244 Identities=24% Similarity=0.339 Sum_probs=203.2
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (1003)
.-.+|.+.++||+|+||.|++|..+.+++.+|||++++. ..++.+..+.|.+|+... +||.+++++++ |..
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----ccc
Confidence 346899999999999999999999999999999999855 356678889999999888 59999999998 788
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
.++.|.||||+.||++..+.+ .+.+++..+.-+|..|+.||.|||++ +|||||+|.+|||+|.+|++||+|
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~~------~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiAD 511 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHIH------TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIAD 511 (694)
T ss_pred CCeEEEEEEecCCCcEEEEEe------cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecc
Confidence 999999999999999443333 46799999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
||+++.-.. .......++||+.|||||++.+..|+.++|.|||||++|||+.|..||.+..
T Consensus 512 FGlcKe~m~-----~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd-------------- 572 (694)
T KOG0694|consen 512 FGLCKEGMG-----QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD-------------- 572 (694)
T ss_pred cccccccCC-----CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC--------------
Confidence 999975422 2233446899999999999999999999999999999999999999998643
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM 984 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 984 (1003)
-.++.+..+..++..-+ -++.+...|+++.+..+|++|.-+
T Consensus 573 ---Eee~FdsI~~d~~~yP~----~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 573 ---EEEVFDSIVNDEVRYPR----FLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---HHHHHHHHhcCCCCCCC----cccHHHHHHHHHHhccCcccccCC
Confidence 22334444444332222 234566777888888888888855
No 65
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8e-36 Score=338.39 Aligned_cols=263 Identities=24% Similarity=0.380 Sum_probs=204.4
Q ss_pred hccCCccCeeeeccceEEEEEEE-----CCCCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeeccc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNL-----GEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 774 (1003)
.++|++.+.||+|+||.||+|++ ..++..||||+++... ....+.+.+|+++++.+ +||||++++++|
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~----- 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC----- 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee-----
Confidence 45799999999999999999975 3456689999987433 23456788999999999 899999999985
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCC----------------------------------------------------
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQ---------------------------------------------------- 802 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 802 (1003)
.+.+..++||||+++|+|.++++.....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 4466789999999999999999764310
Q ss_pred ------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 803 ------------------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 803 ------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
....+++.++..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 012578899999999999999999999 99999999999999999999999999997653
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
..... .......++..|+|||++.+..++.++|||||||++|||++ |..||....... ...+.
T Consensus 266 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-------------~~~~~ 329 (375)
T cd05104 266 NDSNY---VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-------------KFYKM 329 (375)
T ss_pred Ccccc---cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-------------HHHHH
Confidence 32111 11112335678999999999999999999999999999998 888986543221 11122
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
+....... .......++.+++.+||+.+|++||++.|+++.|++.
T Consensus 330 ~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 330 IKEGYRML------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHhCccCC------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 22111110 0111245688999999999999999999999999863
No 66
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-37 Score=327.92 Aligned_cols=263 Identities=22% Similarity=0.378 Sum_probs=212.0
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccc-hHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS-IKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
....+.++||+|-||+|.++.... +..||||+++...... ..+|.+|+++|.+++||||++++|+|.. ++.++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-----DePic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-----DDPLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-----CCchH
Confidence 456778999999999999999863 6899999998665443 5899999999999999999999999853 56679
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+|||++|+|.+|+.++... ........+|+.||+.|++||.+. ++||||+.++|+|+|.++++||+|||+++
T Consensus 612 mI~EYmEnGDLnqFl~aheap---t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELP---TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCc---ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccc
Confidence 999999999999999987432 245566778999999999999999 99999999999999999999999999999
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh--CCCCCCcccCCcchhhHHHHhhCchh
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT--GRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~--g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
.+..+++.... ...+=+++|||||.+.-++++.++|||+||+++||+++ ...||+...++ +
T Consensus 686 ~lysg~yy~vq---gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--------------~ 748 (807)
T KOG1094|consen 686 NLYSGDYYRVQ---GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--------------Q 748 (807)
T ss_pred ccccCCceeee---cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--------------H
Confidence 77665544322 23455789999999999999999999999999999876 77888765432 1
Q ss_pred HHHHHHhhcc-cCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 940 VMEIVDFALL-LDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 940 ~~~~i~~~l~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
..+....++. ..+......+..|+..+++++..||..+.++||+++++...|.+.
T Consensus 749 vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 749 VVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111111111 111112233446778899999999999999999999999998764
No 67
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=297.79 Aligned_cols=257 Identities=26% Similarity=0.344 Sum_probs=212.1
Q ss_pred HHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc--------chHHHHHHHHHHHhc-CCCCceeEeeee
Q 001858 699 NKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG--------SIKSFVAECEALKNI-RHRNLIKIITVC 769 (1003)
Q Consensus 699 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~~~~~~ 769 (1003)
+.....|.-.+.+|.|..++|.++.++.+++.+|+|++...... ..+.-.+|+.|++++ .||+|+++.++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~- 91 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV- 91 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee-
Confidence 34556788889999999999999999999999999999643221 134567799999998 79999999999
Q ss_pred eecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC
Q 001858 770 SSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 849 (1003)
Q Consensus 770 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~ 849 (1003)
++.+.+.++|+|.|+.|.|.|++.. .-.+++...++|+.|+.+|++|||.+ .|||||+||+|||++++
T Consensus 92 ----yes~sF~FlVFdl~prGELFDyLts-----~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn 159 (411)
T KOG0599|consen 92 ----YESDAFVFLVFDLMPRGELFDYLTS-----KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDN 159 (411)
T ss_pred ----ccCcchhhhhhhhcccchHHHHhhh-----heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccc
Confidence 5667888999999999999999987 56799999999999999999999999 99999999999999999
Q ss_pred CCeEEcccccccccccCCccccCcccccccccccccCccccCC------CCCCccccchhHHHHHHHHHhCCCCCCcccC
Q 001858 850 MVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG------GNVSLTGDVYSFGILLLEMFTGRRPTHTMFN 923 (1003)
Q Consensus 850 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~il~ell~g~~P~~~~~~ 923 (1003)
.++||+|||+|+.+.++ ..-+..+||++|.|||.+.- ..|+..+|+||+||++|.++.|.+||....+
T Consensus 160 ~~i~isDFGFa~~l~~G------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ 233 (411)
T KOG0599|consen 160 MNIKISDFGFACQLEPG------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ 233 (411)
T ss_pred cceEEeccceeeccCCc------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH
Confidence 99999999999977543 23345789999999997643 3578889999999999999999999865210
Q ss_pred CcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 924 DGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.-..........+-+.+.+.+......+++.+|++.||++|.|++|+++|=
T Consensus 234 -----------------mlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 234 -----------------MLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred -----------------HHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 011111222344445566677778888999999999999999999999763
No 68
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.8e-36 Score=333.09 Aligned_cols=243 Identities=23% Similarity=0.329 Sum_probs=196.3
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 46999999999999999999999999997432 33456778899999999999999999884 45677899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
|+++|+|.+++.. .+.+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 76 ~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 147 (323)
T cd05595 76 YANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred CCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccC
Confidence 9999999999876 34689999999999999999999999 999999999999999999999999999875322
Q ss_pred CCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHH
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVD 945 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 945 (1003)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+
T Consensus 148 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------------~~~~~~- 207 (323)
T cd05595 148 D-----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------------RLFELI- 207 (323)
T ss_pred C-----CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--------------HHHHHH-
Confidence 1 11122356999999999999999999999999999999999999998653211 111111
Q ss_pred hhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 946 FALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
...... ........+.+++.+|++.+|++|| ++.+++++
T Consensus 208 --~~~~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 208 --LMEEIR----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred --hcCCCC----CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 111110 0112345678899999999999998 88888865
No 69
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=364.38 Aligned_cols=485 Identities=26% Similarity=0.361 Sum_probs=311.4
Q ss_pred cEEEEEeecCCCCcccCccccCCCCCcEEEcCCCCCCCCCchhhcccccCcEEEecccccccccCccCcCCCCCceeecc
Q 001858 77 RVIQLYLRNQSVGGFLSPYVGNLSFLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVR 156 (1003)
Q Consensus 77 ~v~~l~l~~~~~~g~~~~~l~~l~~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~ 156 (1003)
+++.|+++.|.+-.---+.+.+--+|+.|||++|.++ ..|..+..+.+|+.|+++.|.+. .+|.+++++++|++|.|.
T Consensus 22 ~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 22 ALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheec
Confidence 3667777766544321234444555999999999998 89999999999999999999999 899999999999999999
Q ss_pred cccccCCCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCC
Q 001858 157 RNNLTGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGM 236 (1003)
Q Consensus 157 ~N~l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 236 (1003)
+|.+. .+|..+..+ .+|++|++++|++. .+|..+..++.+..+..++|.... .++... .+.+++..|.+.+.
T Consensus 100 ~n~l~-~lP~~~~~l-knl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~----~lg~~~-ik~~~l~~n~l~~~ 171 (1081)
T KOG0618|consen 100 NNRLQ-SLPASISEL-KNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQ----RLGQTS-IKKLDLRLNVLGGS 171 (1081)
T ss_pred cchhh-cCchhHHhh-hcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhh----hhcccc-chhhhhhhhhcccc
Confidence 99887 777776654 67777777777776 677777777777777777772221 222222 66666666666655
Q ss_pred CCC-cccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCC
Q 001858 237 LPP-IFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSS 315 (1003)
Q Consensus 237 ~~~-~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 315 (1003)
++. +.++.. .|+|..|.+. .+.. .++++|+.|....|++.... -..++|+.|+.++|.+....+. .-
T Consensus 172 ~~~~i~~l~~--~ldLr~N~~~-~~dl---s~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~--p~ 239 (1081)
T KOG0618|consen 172 FLIDIYNLTH--QLDLRYNEME-VLDL---SNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH--PV 239 (1081)
T ss_pred hhcchhhhhe--eeecccchhh-hhhh---hhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc--cc
Confidence 442 333333 4667777665 2222 24566677777777665221 1235666777777766632211 12
Q ss_pred CCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCC
Q 001858 316 LPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLA 395 (1003)
Q Consensus 316 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 395 (1003)
-.+|+++++++|++..++ .....|.+|+.++..+|+++ .+|..+...++|+.|.+..|.++ -+|.....++
T Consensus 240 p~nl~~~dis~n~l~~lp-------~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~ 310 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSNLP-------EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLK 310 (1081)
T ss_pred cccceeeecchhhhhcch-------HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccc
Confidence 235777777777776543 34556777777777777774 66777777777777777777776 4566666777
Q ss_pred CccEEEcccccccccCCC-ccccccc-cceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCCeee
Q 001858 396 NIYALGLEYNQLTGTIPY-TIGELIN-LQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLN 473 (1003)
Q Consensus 396 ~L~~L~L~~N~l~~~~~~-~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 473 (1003)
.|+.|+|..|+|. ..|+ .+..+.. |..|+.+.|++.......=..++.|+.|++.+|.++...-..+.+.++|+.|+
T Consensus 311 sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLh 389 (1081)
T KOG0618|consen 311 SLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLH 389 (1081)
T ss_pred eeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeee
Confidence 7777777777776 3343 3333322 66677777777633222222456788888888888877777788888888888
Q ss_pred ccCccccCCCchhhhhhccccccccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCCCcc
Q 001858 474 VSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFR 553 (1003)
Q Consensus 474 ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 553 (1003)
|++|++. .+|+....-...++.|+||+|+++ .+|..+.++..|+.|...+|++. ..| ++..++.|+.+|++.|+|+
T Consensus 390 LsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 390 LSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred ecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhh
Confidence 8888887 788776554444455566666655 44455555556666666666655 445 5555566666666666655
Q ss_pred ccC-CcccccccCcCeeeccCceeccCCcccccCCCccceEecCCC
Q 001858 554 GSI-PSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYLNLSYN 598 (1003)
Q Consensus 554 ~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 598 (1003)
... |... .-++|++|||++|.-....-..|..+.++...+++-|
T Consensus 466 ~~~l~~~~-p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 466 EVTLPEAL-PSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhhhhhhC-CCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 322 2221 1255666666666432233344445555555555444
No 70
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.5e-36 Score=326.61 Aligned_cols=269 Identities=22% Similarity=0.318 Sum_probs=200.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.++||+|+||+||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++ ..++..+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeEE
Confidence 57999999999999999999999999999999987443 23345788999999999999999999984 4566789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++ +|.+++... ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 80 lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~ 151 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLAR 151 (288)
T ss_pred EEEeCCCc-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCccee
Confidence 99999985 999998764 34578999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh---hCc
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM---ALP 937 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~---~~~ 937 (1003)
...... .......|++.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ....... ..+
T Consensus 152 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 225 (288)
T cd07871 152 AKSVPT-----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTE 225 (288)
T ss_pred eccCCC-----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCh
Confidence 542211 11223467999999998765 5688999999999999999999999976432211 1111100 001
Q ss_pred hhHHHHHHh---hcccCCCCch----hhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDF---ALLLDPGNER----AKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~---~l~~~~~~~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.+...... .....+..+. ........+..+++.+|++.+|++|||++|+++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 226 ETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred HHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 111110000 0000010000 0011223567889999999999999999999875
No 71
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=311.37 Aligned_cols=251 Identities=23% Similarity=0.335 Sum_probs=216.5
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEe
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
-|.+..+||+|+||.||+|.++++|+.+|||.+..+ .+.+++.+|+.++++.+.|++|++||.| -.....++|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSY-----FK~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSY-----FKHSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhh-----ccCCceEee
Confidence 477889999999999999999999999999998754 3458899999999999999999999985 345667999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
||||..|+..|.++.. +.++.+.++..++...+.|++|||.. .-+|||||+.|||+..+|.+|++|||.|..+
T Consensus 107 MEYCGAGSiSDI~R~R----~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRAR----RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred hhhcCCCcHHHHHHHh----cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchh
Confidence 9999999999999875 46899999999999999999999999 8999999999999999999999999999654
Q ss_pred ccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
.++......+.||+.|||||++..-.|+.++||||+|++..||..|++||.+..+-...
T Consensus 180 -----TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI---------------- 238 (502)
T KOG0574|consen 180 -----TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI---------------- 238 (502)
T ss_pred -----hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee----------------
Confidence 33445555688999999999999999999999999999999999999999875321110
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.++-..|.+....+++...++-++++.|+-..|++|-|+.++.+|-
T Consensus 239 --FMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 239 --FMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred --EeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 1222344444556778889999999999999999999999998874
No 72
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.7e-36 Score=342.40 Aligned_cols=256 Identities=21% Similarity=0.287 Sum_probs=199.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|++..+++.||||++.... ......+.+|+++++.++||||+++++++ .++..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 47899999999999999999999999999999997432 23346788999999999999999999984 55778
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.. .+.+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 147 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMK-----KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGL 147 (364)
T ss_pred EEEEECCCCCcHHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeeccc
Confidence 8999999999999999976 34689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCcccc---------------------------------CcccccccccccccCccccCCCCCCccccchhHHH
Q 001858 860 AKFLFDRPIQET---------------------------------SSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGI 906 (1003)
Q Consensus 860 a~~~~~~~~~~~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~ 906 (1003)
+..+........ .......+||+.|+|||++.+..++.++||||+||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 227 (364)
T cd05599 148 CTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGV 227 (364)
T ss_pred ceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchh
Confidence 975432110000 00111246999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhc-ccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC--
Q 001858 907 LLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFAL-LLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-- 983 (1003)
Q Consensus 907 il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-- 983 (1003)
++|||++|+.||......+ ....+..... ...|.. ......+.+++.+|+. +|.+|++
T Consensus 228 il~el~~G~~Pf~~~~~~~-------------~~~~i~~~~~~~~~~~~-----~~~s~~~~~li~~ll~-~p~~R~~~~ 288 (364)
T cd05599 228 IMYEMLVGYPPFCSDNPQE-------------TYRKIINWKETLQFPDE-----VPLSPEAKDLIKRLCC-EAERRLGNN 288 (364)
T ss_pred HHHHhhcCCCCCCCCCHHH-------------HHHHHHcCCCccCCCCC-----CCCCHHHHHHHHHHcc-CHhhcCCCC
Confidence 9999999999997532110 0111111000 001110 1123456677777886 8999997
Q ss_pred -HHHHHHH
Q 001858 984 -MADAVKN 990 (1003)
Q Consensus 984 -~~ev~~~ 990 (1003)
++|++++
T Consensus 289 ~~~~ll~h 296 (364)
T cd05599 289 GVNEIKSH 296 (364)
T ss_pred CHHHHhcC
Confidence 9988875
No 73
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.5e-36 Score=324.25 Aligned_cols=257 Identities=25% Similarity=0.405 Sum_probs=203.7
Q ss_pred hccCCccCeeeeccceEEEEEEEC---CCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLG---EDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.++|++.+.||+|+||.||+|.+. ..+..||+|+++.... .....|.+|+.++++++||||+++++++ ..+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVI-----TRG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----ecC
Confidence 457899999999999999999875 3456899999875432 3346789999999999999999999985 346
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..++||||+++|+|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++||
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~df 151 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGF 151 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCC
Confidence 6789999999999999999764 24689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|.+........ .......++..|+|||.+.+..++.++||||+||++||+++ |+.||......
T Consensus 152 g~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~------------ 215 (266)
T cd05064 152 RRLQEDKSEAI----YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ------------ 215 (266)
T ss_pred cccccccccch----hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH------------
Confidence 98764322111 11112335678999999999999999999999999999775 99998754211
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
+..+.+..... .+....++..+.+++.+||+.+|++||++.|+.+.|+.+
T Consensus 216 --~~~~~~~~~~~------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 216 --DVIKAVEDGFR------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --HHHHHHHCCCC------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11111211111 111233556788999999999999999999999988764
No 74
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=8.2e-36 Score=332.43 Aligned_cols=243 Identities=25% Similarity=0.340 Sum_probs=196.9
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++ ..++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999997432 33456788999999999999999999884 55678899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
|+++|+|.+++.. .+.+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 76 y~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~ 147 (328)
T cd05593 76 YVNGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT 147 (328)
T ss_pred CCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCC
Confidence 9999999999876 34689999999999999999999999 999999999999999999999999999875322
Q ss_pred CCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHH
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVD 945 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 945 (1003)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+
T Consensus 148 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--------------~~~~~~- 207 (328)
T cd05593 148 D-----AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------------KLFELI- 207 (328)
T ss_pred c-----ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--------------HHHHHh-
Confidence 1 11122356999999999999999999999999999999999999999653211 111111
Q ss_pred hhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 946 FALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
...... ........+.+++.+|++.+|++|| ++.|++++
T Consensus 208 --~~~~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 208 --LMEDIK----FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --ccCCcc----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 111110 0112345678899999999999997 89999876
No 75
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=9e-36 Score=337.58 Aligned_cols=265 Identities=23% Similarity=0.400 Sum_probs=204.8
Q ss_pred HhccCCccCeeeeccceEEEEEEECC-----CCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSID 773 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 773 (1003)
..++|++.+.||+|+||.||+|++.. ++..||+|+++... ....+.+.+|+++++.+ +||||++++++|
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~---- 111 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC---- 111 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe----
Confidence 34579999999999999999998643 33579999997433 23356788999999999 899999999985
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCC----------------------------------------------------
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSND---------------------------------------------------- 801 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------- 801 (1003)
......++||||+++|+|.++++....
T Consensus 112 -~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 112 -THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred -cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 446678999999999999999865321
Q ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCc
Q 001858 802 -------------QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPI 868 (1003)
Q Consensus 802 -------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~ 868 (1003)
.....+++.++++++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 0123578899999999999999999999 999999999999999999999999999976532211
Q ss_pred cccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 869 QETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 869 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
........++..|+|||++.+..++.++||||+||++|||++ |+.||....... .....+...
T Consensus 268 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-------------~~~~~~~~~ 331 (374)
T cd05106 268 ---YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-------------KFYKMVKRG 331 (374)
T ss_pred ---eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-------------HHHHHHHcc
Confidence 111112335678999999998899999999999999999997 999987543211 111111111
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
..... ....+.++.+++.+||+.+|++||++.++++.|+++.
T Consensus 332 ~~~~~------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 332 YQMSR------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCccC------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 11100 0112456889999999999999999999999998763
No 76
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.5e-36 Score=339.07 Aligned_cols=206 Identities=24% Similarity=0.335 Sum_probs=176.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|++++++++||+|+++++.+ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 46889999999999999999999999999999997432 23346788899999999999999999884 55678
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.+ .+.+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGl 147 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMK-----KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGL 147 (363)
T ss_pred EEEEEcCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccC
Confidence 8999999999999999986 45789999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccc------------------------------cCcccccccccccccCccccCCCCCCccccchhHHHHHH
Q 001858 860 AKFLFDRPIQE------------------------------TSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLL 909 (1003)
Q Consensus 860 a~~~~~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ 909 (1003)
++.+....... ........+||+.|+|||++.+..++.++||||+||++|
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ 227 (363)
T cd05628 148 CTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (363)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHH
Confidence 97653211000 000012357999999999999999999999999999999
Q ss_pred HHHhCCCCCCcc
Q 001858 910 EMFTGRRPTHTM 921 (1003)
Q Consensus 910 ell~g~~P~~~~ 921 (1003)
||++|+.||...
T Consensus 228 ell~G~~Pf~~~ 239 (363)
T cd05628 228 EMLIGYPPFCSE 239 (363)
T ss_pred HHHhCCCCCCCC
Confidence 999999999753
No 77
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.5e-36 Score=341.19 Aligned_cols=256 Identities=22% Similarity=0.290 Sum_probs=196.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .+.+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~-----~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE-----ecCCEE
Confidence 5888999999999999999999999999999997432 23356789999999999999999999985 456788
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++|+|.+++.. .+.+++..+..++.|++.|++|||+. +|+||||||+||+++.++++||+|||++
T Consensus 77 ~lv~E~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~ 148 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIR-----MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLC 148 (381)
T ss_pred EEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCC
Confidence 999999999999999986 34688999999999999999999999 9999999999999999999999999998
Q ss_pred cccccCCcc------------------------------------------ccCcccccccccccccCccccCCCCCCcc
Q 001858 861 KFLFDRPIQ------------------------------------------ETSSSSIGIKGTVGYVAPEYGMGGNVSLT 898 (1003)
Q Consensus 861 ~~~~~~~~~------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 898 (1003)
+.+...... ..........||+.|+|||++.+..++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 228 (381)
T cd05626 149 TGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQL 228 (381)
T ss_pred cccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCc
Confidence 643110000 00001123579999999999998889999
Q ss_pred ccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh-cccCCCCchhhHHHHHHHHHHHHhh--ccc
Q 001858 899 GDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA-LLLDPGNERAKIEECLTAVVRIGVL--CSM 975 (1003)
Q Consensus 899 sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-l~~~~~~~~~~~~~~~~~l~~l~~~--cl~ 975 (1003)
+||||+||++|||++|+.||......+ .....+... ....|. ......++.+++.+ |+.
T Consensus 229 ~DiwSlG~il~elltG~~Pf~~~~~~~-------------~~~~i~~~~~~~~~~~-----~~~~s~~~~dli~~ll~~~ 290 (381)
T cd05626 229 CDWWSVGVILFEMLVGQPPFLAPTPTE-------------TQLKVINWENTLHIPP-----QVKLSPEAVDLITKLCCSA 290 (381)
T ss_pred cceeehhhHHHHHHhCCCCCcCCCHHH-------------HHHHHHccccccCCCC-----CCCCCHHHHHHHHHHccCc
Confidence 999999999999999999997532211 011111100 001110 01122344455554 667
Q ss_pred cCCCCCCCHHHHHHH
Q 001858 976 ESPSERIHMADAVKN 990 (1003)
Q Consensus 976 ~~p~~RPs~~ev~~~ 990 (1003)
++|..||+++|+++|
T Consensus 291 ~~~~~R~~~~~~l~h 305 (381)
T cd05626 291 EERLGRNGADDIKAH 305 (381)
T ss_pred ccccCCCCHHHHhcC
Confidence 777789999999986
No 78
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.1e-36 Score=329.47 Aligned_cols=271 Identities=22% Similarity=0.324 Sum_probs=200.5
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.++|++.+.||+|+||+||+|++..+++.||+|+++.... .....+.+|+++++.++||||+++++++ .++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCeE
Confidence 4689999999999999999999998999999999874432 2345678899999999999999999984 456778
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||++ ++|.+++... .+.+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 ~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 150 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKH----PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLA 150 (303)
T ss_pred EEEEECCC-cCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcc
Confidence 99999996 5888888764 34688999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh--Cc
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA--LP 937 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~--~~ 937 (1003)
+...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||................. ..
T Consensus 151 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (303)
T cd07869 151 RAKSVPS-----HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPN 225 (303)
T ss_pred eeccCCC-----ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCC
Confidence 7542211 11223468999999998765 4578899999999999999999999976432211111111100 00
Q ss_pred hhHHHHHHh--------hcccCCCCchhhHH--HHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDF--------ALLLDPGNERAKIE--ECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~--------~l~~~~~~~~~~~~--~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
......... .....+........ .....+.+++.+|++.+|++|||+.|+++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 226 EDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred hhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 000000000 00000100000000 122457789999999999999999999875
No 79
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-35 Score=325.43 Aligned_cols=260 Identities=26% Similarity=0.495 Sum_probs=207.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCC-----ceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDL-----LPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
++|++.+.||+|+||.||+|.+...+ ..||+|.++.... .....|.+|++++++++||||+++++++ ..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVC-----TK 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEE-----cC
Confidence 47889999999999999999986544 6799999874432 2346789999999999999999999985 34
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCC-----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceE
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVD-----------GNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVL 845 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nil 845 (1003)
....+++|||+++++|.+++........ ..+++.+++.++.|++.|++|||+. +++||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 5677999999999999999987533212 5688999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 001858 846 LDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFND 924 (1003)
Q Consensus 846 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~ 924 (1003)
++.++.+||+|||+++........ .......+++.|+|||.+.+..++.++||||+||++|||++ |..||.....
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~- 232 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYY---RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN- 232 (283)
T ss_pred EcCCCcEEECCCcceeeccccccc---cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 999999999999999765332211 11122346788999999988899999999999999999998 9999865321
Q ss_pred cchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 925 GLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+..+.+.... .......++.++.+++.+||+.+|++||+++||+++|++
T Consensus 233 -------------~~~~~~i~~~~------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 -------------QEVIEMIRSRQ------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -------------HHHHHHHHcCC------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11222222111 111223456789999999999999999999999999975
No 80
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.7e-36 Score=330.29 Aligned_cols=241 Identities=24% Similarity=0.317 Sum_probs=193.9
Q ss_pred eeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
||+|+||.||+|++..+++.||+|+++.. .......+.+|++++++++||||+++++++ .+++..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence 69999999999999989999999998643 233456788999999999999999999884 4567889999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++|+|.+++.. .+.+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 76 ~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 147 (312)
T cd05585 76 NGGELFHHLQR-----EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD 147 (312)
T ss_pred CCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC
Confidence 99999999976 34689999999999999999999999 99999999999999999999999999997542211
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+.....
T Consensus 148 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----------------~~~~~~~ 205 (312)
T cd05585 148 -----DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----------------NEMYRKI 205 (312)
T ss_pred -----CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----------------HHHHHHH
Confidence 112235699999999999999999999999999999999999999975321 0111111
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC---HHHHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH---MADAVKN 990 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~ev~~~ 990 (1003)
..... . ........+.+++.+|++.+|++||+ +.|++.|
T Consensus 206 ~~~~~-~---~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 206 LQEPL-R---FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HcCCC-C---CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 11111 0 01123456788999999999999985 6677654
No 81
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.2e-36 Score=332.80 Aligned_cols=267 Identities=23% Similarity=0.353 Sum_probs=205.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.++|++.++||+|+||.||+|.+..++..+|+|++.... ....+.+.+|+++++.++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE-----ECCEE
Confidence 468999999999999999999999999999999987543 233467899999999999999999999953 46678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++|+|.+++.. .+.+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++
T Consensus 79 ~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~ 151 (333)
T cd06650 79 SICMEHMDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 151 (333)
T ss_pred EEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcc
Confidence 999999999999999986 346889999999999999999999742 6999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-----
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA----- 935 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~----- 935 (1003)
....... .....|+..|+|||++.+..++.++||||+||++|||++|+.||......+. .......
T Consensus 152 ~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~ 222 (333)
T cd06650 152 GQLIDSM-------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL--ELMFGCPVEGDP 222 (333)
T ss_pred hhhhhhc-------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH--HHHhcCcccCCc
Confidence 7553211 1234689999999999988899999999999999999999999975332111 0000000
Q ss_pred ------------------------CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 936 ------------------------LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 936 ------------------------~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.........+......+..... .....++.+++.+||+.+|++||+++|++++-
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~ 300 (333)
T cd06650 223 AESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS--GVFGAEFQDFVNKCLIKNPAERADLKQLMVHA 300 (333)
T ss_pred cccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCC--CCcCHHHHHHHHHhccCCcccCcCHHHHhhCH
Confidence 0000111111111111100000 01235688999999999999999999998763
No 82
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.7e-36 Score=334.56 Aligned_cols=247 Identities=22% Similarity=0.318 Sum_probs=200.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCC-ceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDL-LPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.++|++.+.||+|+||.||+|.+..++ ..||+|++.... ....+.+.+|+++++.++||||+++++++ .++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~ 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----KDE 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----EeC
Confidence 457999999999999999999976554 689999986432 33456788999999999999999999985 456
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..++||||+++|+|.+++.. .+.+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DF 175 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRR-----NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDF 175 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecC
Confidence 778999999999999999987 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
|++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 176 G~a~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------------- 234 (340)
T PTZ00426 176 GFAKVVDTR--------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL------------- 234 (340)
T ss_pred CCCeecCCC--------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-------------
Confidence 999765321 12356999999999999888999999999999999999999999753211
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
.....+......-| ......+.+++.+|++.+|++|+ +++|+.++
T Consensus 235 -~~~~~i~~~~~~~p-------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 235 -LIYQKILEGIIYFP-------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -HHHHHHhcCCCCCC-------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 11111111111111 11234567889999999999995 89998876
No 83
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=343.36 Aligned_cols=269 Identities=21% Similarity=0.281 Sum_probs=213.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcC-CCCceeEeee-eeecccCC-CC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIR-HRNLIKIITV-CSSIDFKG-DD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~-~~~~~~~~-~~ 778 (1003)
..++++.++|.+|||+.||.|.+.+.+..||+|++-..++.......+|+++|+.++ |+|||.+++. .....-.. .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 356788899999999999999999887999999998777777889999999999996 9999999993 22211122 35
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
++++.||||.||.|-|++..+.. ..+.+.++++|+.++++|+++||.. +++|||||||-+|||++.+|..||||||
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 67899999999999999987653 3499999999999999999999997 6789999999999999999999999999
Q ss_pred cccccccCCccccC----cccccccccccccCcccc---CCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHH
Q 001858 859 LAKFLFDRPIQETS----SSSIGIKGTVGYVAPEYG---MGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~ 931 (1003)
.|+-.......... ........|+.|.|||.+ .+..++.|+||||+||+||-++....||+....- .
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--a---- 265 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--A---- 265 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--e----
Confidence 99653322110000 011123468999999964 5678999999999999999999999999864211 0
Q ss_pred HHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 932 VKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
++ +.....+....+...+..+++.|++++|++||++.+|+..+.++...
T Consensus 266 -----------Il------ng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 266 -----------IL------NGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -----------EE------eccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 00 01111222345678899999999999999999999999999887643
No 84
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.3e-35 Score=331.79 Aligned_cols=266 Identities=24% Similarity=0.395 Sum_probs=206.9
Q ss_pred hccCCccCeeeeccceEEEEEEECC-----CCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeeccc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 774 (1003)
.++|++.+.||+|+||.||+|.+.. +++.||+|+++... ....+.+.+|+++++++ +||||++++++|.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~---- 81 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT---- 81 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe----
Confidence 4589999999999999999997543 34789999987432 22346788899999999 8999999999873
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCCC---------------------------------------------------
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQV--------------------------------------------------- 803 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 803 (1003)
..+...++++||+++++|.+++.......
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 34567789999999999999997532110
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccCcccccc
Q 001858 804 -----DGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGI 878 (1003)
Q Consensus 804 -----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 878 (1003)
...+++.++..++.||+.|++|||+. +|+||||||+||+++.++.++|+|||+++.+....... .....
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~---~~~~~ 235 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV---RKGDA 235 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh---hccCC
Confidence 13689999999999999999999999 99999999999999999999999999998763322111 11123
Q ss_pred cccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchh
Q 001858 879 KGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERA 957 (1003)
Q Consensus 879 ~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~ 957 (1003)
.++..|+|||++.+..++.++||||+||++|||++ |+.||......+ .....+.......
T Consensus 236 ~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-------------~~~~~~~~~~~~~------ 296 (337)
T cd05054 236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-------------EFCRRLKEGTRMR------ 296 (337)
T ss_pred CCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-------------HHHHHHhccCCCC------
Confidence 46778999999999999999999999999999998 999987532211 1111111111110
Q ss_pred hHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 958 KIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 958 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
........+.+++.+||+.+|++||++.|++++|+.+.+
T Consensus 297 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 297 APEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011234578899999999999999999999999998765
No 85
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.6e-36 Score=338.95 Aligned_cols=255 Identities=24% Similarity=0.339 Sum_probs=204.5
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|+++++.++||||++++++ +.+++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~-----~~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYS-----FQDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhh-----eecCCe
Confidence 46899999999999999999999899999999997432 2445678999999999999999999987 455778
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++++|.+++... +.+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCC
Confidence 89999999999999999873 5689999999999999999999998 999999999999999999999999999
Q ss_pred ccccccCCc------------------------cccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCC
Q 001858 860 AKFLFDRPI------------------------QETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGR 915 (1003)
Q Consensus 860 a~~~~~~~~------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~ 915 (1003)
+........ ...........||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 227 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGF 227 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCC
Confidence 976543220 00011223356999999999999999999999999999999999999
Q ss_pred CCCCcccCCcchhhHHHHhhCchhHHHHHH--hhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-HHHHHHH
Q 001858 916 RPTHTMFNDGLTLHGFVKMALPEKVMEIVD--FALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-MADAVKN 990 (1003)
Q Consensus 916 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-~~ev~~~ 990 (1003)
.||...... +....+.. .... .|. ...+...+.+++.+|+. +|++||+ ++|++++
T Consensus 228 ~Pf~~~~~~-------------~~~~~i~~~~~~~~-~p~-----~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 228 PPFYSDTLQ-------------ETYNKIINWKESLR-FPP-----DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCCCHH-------------HHHHHHhccCCccc-CCC-----CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 999753311 01111111 0111 111 11135567888889997 9999999 9999986
No 86
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-35 Score=320.34 Aligned_cols=262 Identities=23% Similarity=0.345 Sum_probs=208.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||.||+|++..+++.||||.++... ......+.+|+++++.++|||++++++++. +.+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence 57899999999999999999999899999999876322 233457899999999999999999999853 4567
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|+||+++++|.+++...... ...+++.+++.++.|++.|++|||++ +++|+||||+||+++.++.++++|||+
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~ 152 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ-KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGL 152 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECcccc
Confidence 79999999999999998754322 34688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
+........ ......|+..|+|||.+.+..++.++|+||+|+++|||++|+.||........ .
T Consensus 153 ~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~------------~ 215 (267)
T cd08228 153 GRFFSSKTT-----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF------------S 215 (267)
T ss_pred ceeccchhH-----HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH------------H
Confidence 976543211 11234588899999999888899999999999999999999999854321110 1
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
....+... ..+ ..........+.+++.+||+.+|++||+++++++.+++++
T Consensus 216 ~~~~~~~~--~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 216 LCQKIEQC--DYP---PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHhcC--CCC---CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 11111110 111 1112234567889999999999999999999999998764
No 87
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.1e-35 Score=317.96 Aligned_cols=257 Identities=27% Similarity=0.481 Sum_probs=206.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|++++++++|||++++++++ ..+...+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFY 78 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEE-----cCCCCcE
Confidence 34688889999999999999999988999999998743 33457889999999999999999999985 3456779
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.... ...+++..++.++.|+++|++|||+. +++||||||+||++++++.+|++|||.+.
T Consensus 79 lv~e~~~~~~L~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 79 IITEFMTYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEEeCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 9999999999999997643 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
......... .....++..|+|||...+..++.++|||||||++|||++ |..||...... +.
T Consensus 153 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------------~~ 214 (263)
T cd05052 153 LMTGDTYTA----HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------QV 214 (263)
T ss_pred ccccceeec----cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------------HH
Confidence 654322111 112234678999999988999999999999999999998 99998653211 11
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
...+...... .....++..+.+++.+||+.+|++||++.|+.+.|+.+
T Consensus 215 ~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 215 YELLEKGYRM------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHCCCCC------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 1111111111 11122356788999999999999999999999999875
No 88
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.5e-38 Score=340.25 Aligned_cols=381 Identities=26% Similarity=0.355 Sum_probs=332.2
Q ss_pred CCcEEEEEeecCCCC-cccCccccCCCCCcEEEcCCCCCCCCCchhhcccccCcEEEecccccccccCccCcCCCCCcee
Q 001858 75 HPRVIQLYLRNQSVG-GFLSPYVGNLSFLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINF 153 (1003)
Q Consensus 75 ~~~v~~l~l~~~~~~-g~~~~~l~~l~~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L 153 (1003)
.+-|..+|+++|+++ +..|.++..++.+++|.|...++. .+|.+++.|.+|++|.+++|++. .+-..++.|+.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 357889999999999 579999999999999999999999 99999999999999999999999 677889999999999
Q ss_pred ecccccccC-CCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcc-cccCCCCCCeEecCCc
Q 001858 154 SVRRNNLTG-EIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPE-SLGQLRDLNFLSVAEN 231 (1003)
Q Consensus 154 ~l~~N~l~~-~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~N 231 (1003)
++++|++.. -||..+..+ ..|+.||||+|+++ ..|..+..-+++-.|+||+|+|. .||. -+.+|+.|-+||||+|
T Consensus 84 ~~R~N~LKnsGiP~diF~l-~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~N 160 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRL-KDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNN 160 (1255)
T ss_pred hhhccccccCCCCchhccc-ccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccc
Confidence 999999975 789999875 89999999999999 89999999999999999999999 5665 5789999999999999
Q ss_pred cCCCCCCCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccc-cCcCccccccccchhhhccCccccCccC
Q 001858 232 NFSGMLPPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLT-GSIPQSFSNASNLVILNLSGNHFSGKVG 310 (1003)
Q Consensus 232 ~l~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 310 (1003)
++..++|.+-.+..|++|.|++|.+.- ....-.-.+++|+.|++++.+-+ .-+|.++..+.+|..+|||.|.+. .+|
T Consensus 161 rLe~LPPQ~RRL~~LqtL~Ls~NPL~h-fQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 161 RLEMLPPQIRRLSMLQTLKLSNNPLNH-FQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred hhhhcCHHHHHHhhhhhhhcCCChhhH-HHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cch
Confidence 999999999999999999999998762 11111115778889999988765 458999999999999999999998 778
Q ss_pred cccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccC-cccc
Q 001858 311 IDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISG-TIPL 389 (1003)
Q Consensus 311 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~ 389 (1003)
..+-.+++|+.|+|++|+|+.+..+. ....+|++|+|+.|+++ .+|..++++++|+.|.+.+|+++- -+|.
T Consensus 239 ecly~l~~LrrLNLS~N~iteL~~~~-------~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPS 310 (1255)
T KOG0444|consen 239 ECLYKLRNLRRLNLSGNKITELNMTE-------GEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPS 310 (1255)
T ss_pred HHHhhhhhhheeccCcCceeeeeccH-------HHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCcc
Confidence 88999999999999999999876542 23468999999999999 899999999999999999999874 4788
Q ss_pred cccCCCCccEEEcccccccccCCCccccccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCC
Q 001858 390 EIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNL 469 (1003)
Q Consensus 390 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 469 (1003)
.++++.+|+++..++|.+. ..|+.++.+..|+.|.|++|++- .+|+++.-++.|+.|||..|.=--..|..-..-++|
T Consensus 311 GIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~l 388 (1255)
T KOG0444|consen 311 GIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKL 388 (1255)
T ss_pred chhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcc
Confidence 9999999999999999998 89999999999999999999987 689999999999999999987552333322222445
Q ss_pred Cee
Q 001858 470 MLL 472 (1003)
Q Consensus 470 ~~L 472 (1003)
+.-
T Consensus 389 efY 391 (1255)
T KOG0444|consen 389 EFY 391 (1255)
T ss_pred eee
Confidence 443
No 89
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=346.81 Aligned_cols=263 Identities=23% Similarity=0.268 Sum_probs=207.7
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccC---
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFK--- 775 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 775 (1003)
..++|++.+.||+|+||+||+|++..+++.||||++.... ......+.+|+..+..++|+|++++.+.+...+..
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4579999999999999999999999899999999986442 33456788999999999999999988765432211
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEc
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 855 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~ 855 (1003)
.....++||||+++|+|.+++...... ...+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~-~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKT-NRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 112367999999999999999764332 45789999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh
Q 001858 856 DFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 856 DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
|||+++.+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 186 DFGls~~~~~~~~---~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~------------ 250 (496)
T PTZ00283 186 DFGFSKMYAATVS---DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM------------ 250 (496)
T ss_pred ecccCeecccccc---ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------------
Confidence 9999986543211 1122345799999999999999999999999999999999999999965321
Q ss_pred CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+.+......... +....+...+.+++.+||+.+|++||++.+++++
T Consensus 251 -----~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 251 -----EEVMHKTLAGRYD---PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -----HHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111111111111 1112345678899999999999999999999875
No 90
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.6e-35 Score=323.87 Aligned_cols=253 Identities=24% Similarity=0.309 Sum_probs=201.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.|++.++||+|+||+||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++ ..++..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence 4788899999999999999998889999999986432 22235678899999999999999999884 456678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++|+|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMG---NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEeccCCCcHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCc
Confidence 99999999999999887532 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... .. +.+
T Consensus 150 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~---------~~~ 213 (285)
T cd05605 150 VEIPEGE------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KR---------EEV 213 (285)
T ss_pred eecCCCC------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HH---------HHH
Confidence 7653211 1123468999999999998899999999999999999999999997532110 00 011
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
...+. ..+. .........+.+++.+||+.+|++|| +++++.++
T Consensus 214 ~~~~~----~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 214 ERRVK----EDQE---EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHhh----hccc---ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 11111 1111 11123456688999999999999999 88899776
No 91
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=347.20 Aligned_cols=256 Identities=21% Similarity=0.246 Sum_probs=204.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCC-CceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGED-LLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..|.+.+.||+|+||.||+|....+ +..||+|.+..........+.+|+++++.++||||+++++++ ..++..+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~-----~~~~~~~ 141 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDF-----KSDDKLL 141 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----EECCEEE
Confidence 3488999999999999999998777 778999987655555556788899999999999999999985 4467789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++|+|.+++...... ...+++.++..++.|++.||+|+|++ +|+||||||+||+++.++.+||+|||+++
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKE-HLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 999999999999988753221 45688999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
.+.+... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .
T Consensus 218 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----------------~ 277 (478)
T PTZ00267 218 QYSDSVS---LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----------------R 277 (478)
T ss_pred ecCCccc---cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----------------H
Confidence 6543211 1122345699999999999999999999999999999999999999864321 1
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.+......... +....+...+.+++.+|++.+|++||++++++.+
T Consensus 278 ~~~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 278 EIMQQVLYGKYD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHHhCCCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 111111111110 0111234568899999999999999999999754
No 92
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.8e-36 Score=340.96 Aligned_cols=257 Identities=21% Similarity=0.263 Sum_probs=196.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++.+ .+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 36899999999999999999999999999999986432 23356788999999999999999999884 55778
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.. .+.+++..++.++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~ 147 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIR-----LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (376)
T ss_pred EEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence 8999999999999999976 34688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCc--------------------------------------cccCcccccccccccccCccccCCCCCCccccc
Q 001858 860 AKFLFDRPI--------------------------------------QETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDV 901 (1003)
Q Consensus 860 a~~~~~~~~--------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv 901 (1003)
|..+..... ...........||+.|+|||++.+..++.++||
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 227 (376)
T cd05598 148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW 227 (376)
T ss_pred CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceee
Confidence 853310000 000001123579999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCC
Q 001858 902 YSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSER 981 (1003)
Q Consensus 902 wslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R 981 (1003)
||+||++|||++|+.||......+. ............ .+........+.+++.+|+ .+|++|
T Consensus 228 wSlGvilyell~G~~Pf~~~~~~~~-------------~~~i~~~~~~~~----~~~~~~~s~~~~~li~~l~-~~p~~R 289 (376)
T cd05598 228 WSVGVILYEMLVGQPPFLADTPAET-------------QLKVINWETTLH----IPSQAKLSREASDLILRLC-CGAEDR 289 (376)
T ss_pred eeccceeeehhhCCCCCCCCCHHHH-------------HHHHhccCcccc----CCCCCCCCHHHHHHHHHHh-cCHhhc
Confidence 9999999999999999975432110 011110000000 0000112334455555655 499999
Q ss_pred C---CHHHHHHH
Q 001858 982 I---HMADAVKN 990 (1003)
Q Consensus 982 P---s~~ev~~~ 990 (1003)
+ ++.|+++|
T Consensus 290 ~~~~t~~ell~h 301 (376)
T cd05598 290 LGKNGADEIKAH 301 (376)
T ss_pred CCCCCHHHHhCC
Confidence 9 89999876
No 93
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-35 Score=334.84 Aligned_cols=265 Identities=22% Similarity=0.271 Sum_probs=201.6
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|++.+.||+|+||.||+|.+..+++.||+|... .+.+.+|++++++++||||+++++++ ..+...+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTF-----TYNKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEE-----EECCeeE
Confidence 357999999999999999999999999999999753 24567899999999999999999985 3456789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+|++. ++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 160 lv~e~~~-~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 160 LILPRYK-TDLYCYLAA-----KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred EEEecCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 9999996 589998876 34688999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCC------cchhhHHHHhh
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFND------GLTLHGFVKMA 935 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~------~~~~~~~~~~~ 935 (1003)
...+.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||-..... ...+.......
T Consensus 231 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~ 306 (391)
T PHA03212 231 FPVDIN----ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRS 306 (391)
T ss_pred cccccc----ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHh
Confidence 542211 11223457999999999999999999999999999999999999886432211 11111111100
Q ss_pred ------Cc----hhHHHHH---HhhcccCCCCc--hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 ------LP----EKVMEIV---DFALLLDPGNE--RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ------~~----~~~~~~i---~~~l~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+ ....... .......+..+ .....+....+..++.+|++.+|++|||++|++++
T Consensus 307 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 307 GTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred cCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 01 0111111 11111122211 11223445678899999999999999999999975
No 94
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1e-35 Score=339.56 Aligned_cols=205 Identities=24% Similarity=0.335 Sum_probs=173.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.|++.++||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .+++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~-----~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE-----EeCCEE
Confidence 5888999999999999999999999999999987432 23356788999999999999999999984 456788
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++|+|.+++.+ .+.+++..+..++.|++.|++|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 77 ~lv~E~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla 148 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIR-----MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLC 148 (382)
T ss_pred EEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCC
Confidence 999999999999999976 34688999999999999999999999 9999999999999999999999999998
Q ss_pred cccccCCc------------------------------------------cccCcccccccccccccCccccCCCCCCcc
Q 001858 861 KFLFDRPI------------------------------------------QETSSSSIGIKGTVGYVAPEYGMGGNVSLT 898 (1003)
Q Consensus 861 ~~~~~~~~------------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 898 (1003)
+.+..... ...........||+.|+|||++.+..++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 228 (382)
T cd05625 149 TGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 228 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCe
Confidence 53311000 000001123569999999999999999999
Q ss_pred ccchhHHHHHHHHHhCCCCCCcc
Q 001858 899 GDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 899 sDvwslG~il~ell~g~~P~~~~ 921 (1003)
+||||+||++|||++|+.||...
T Consensus 229 ~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 229 CDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred eeEEechHHHHHHHhCCCCCCCC
Confidence 99999999999999999999753
No 95
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=9.7e-36 Score=339.08 Aligned_cols=257 Identities=19% Similarity=0.241 Sum_probs=197.0
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|.+..+++.||||++.... ....+.+.+|+++++.++||||+++++++ .+..+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 46889999999999999999999999999999986432 23356788999999999999999999984 55778
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.. .+.+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGl 147 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIK-----YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGL 147 (377)
T ss_pred eEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccc
Confidence 8999999999999999976 34688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccc--------cC----------------------------------cccccccccccccCccccCCCCCCc
Q 001858 860 AKFLFDRPIQE--------TS----------------------------------SSSIGIKGTVGYVAPEYGMGGNVSL 897 (1003)
Q Consensus 860 a~~~~~~~~~~--------~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 897 (1003)
++.+....... .. .......||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 227 (377)
T cd05629 148 STGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQ 227 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCC
Confidence 96432110000 00 0001246999999999999999999
Q ss_pred cccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh-cccCCCCchhhHHHHHHHHHHHHhhcccc
Q 001858 898 TGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA-LLLDPGNERAKIEECLTAVVRIGVLCSME 976 (1003)
Q Consensus 898 ~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-l~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 976 (1003)
++||||+||++|||++|+.||......+ ......... ...-|. .......+.+++.+|+.
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~-------------~~~~i~~~~~~~~~p~-----~~~~s~~~~dli~~lL~- 288 (377)
T cd05629 228 ECDWWSLGAIMFECLIGWPPFCSENSHE-------------TYRKIINWRETLYFPD-----DIHLSVEAEDLIRRLIT- 288 (377)
T ss_pred ceeeEecchhhhhhhcCCCCCCCCCHHH-------------HHHHHHccCCccCCCC-----CCCCCHHHHHHHHHHhc-
Confidence 9999999999999999999996532110 001111100 000011 01123456677778886
Q ss_pred CCCC---CCCHHHHHHHH
Q 001858 977 SPSE---RIHMADAVKNL 991 (1003)
Q Consensus 977 ~p~~---RPs~~ev~~~L 991 (1003)
+|.+ |+++.|++++-
T Consensus 289 ~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 289 NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred CHhhcCCCCCHHHHhcCC
Confidence 5555 56999998863
No 96
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.5e-35 Score=323.36 Aligned_cols=273 Identities=23% Similarity=0.319 Sum_probs=202.3
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhc---CCCCceeEeeeeeecccCCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNI---RHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+|++.+.||+|+||+||+|++..+++.||+|.++... ......+.+|+++++++ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5888999999999999999999999999999987432 22234566788777766 699999999987654444456
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||+++ +|.+++.... ...+++.+++.++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccC
Confidence 78999999985 8999887643 34589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-Cc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-LP 937 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~~ 937 (1003)
+++...... ......||..|+|||++.+..++.++||||+||++|||++|+.||......+ ......... .+
T Consensus 154 ~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~ 226 (288)
T cd07863 154 LARIYSCQM------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLP 226 (288)
T ss_pred ccccccCcc------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCC
Confidence 997653221 1123468999999999988899999999999999999999999986543211 111111100 00
Q ss_pred --hhHHHHHH---hhcc-cCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 --EKVMEIVD---FALL-LDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 --~~~~~~i~---~~l~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+..... .... ..+........+....+.+++.+|+++||++||++.|++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000 0000 00000111122345667899999999999999999999865
No 97
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.6e-35 Score=325.41 Aligned_cols=261 Identities=24% Similarity=0.393 Sum_probs=205.2
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCc----eEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLL----PVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
..+|++.+.||+|+||.||+|++..++. .||+|+++... ....+++.+|+.+++.++||||++++++|..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~----- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-----
Confidence 3569999999999999999999865554 48999987443 3345688999999999999999999998632
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
...++|+||+++|+|.+++... ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 -~~~~~v~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 81 -STVQLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred -CCceeeeecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 2457999999999999999864 24588899999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhh
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 153 fG~a~~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~------------ 217 (316)
T cd05108 153 FGLAKLLGADEKE---YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------------ 217 (316)
T ss_pred ccccccccCCCcc---eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH------------
Confidence 9999866432111 11112234678999999999999999999999999999998 9999865321
Q ss_pred CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhh
Q 001858 936 LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKY 998 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~ 998 (1003)
.+....+...... + ....+...+.+++.+||+.+|++||++.+++..+..+.+..
T Consensus 218 --~~~~~~~~~~~~~-~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 218 --SEISSILEKGERL-P-----QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred --HHHHHHHhCCCCC-C-----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 1111222211111 1 11123456789999999999999999999999998876654
No 98
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.9e-36 Score=336.17 Aligned_cols=250 Identities=24% Similarity=0.345 Sum_probs=194.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.+|+..++||+|+||+||+|++..+++.||||++..... ...+.+.+|+++++.++|+||+++++++ ...+..+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeEE
Confidence 456778999999999999999998999999999864432 2346789999999999999999999984 5567789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++|+|.+. ....+..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 149 lv~e~~~~~~L~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~ 216 (353)
T PLN00034 149 VLLEFMDGGSLEGT---------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSR 216 (353)
T ss_pred EEEecCCCCccccc---------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccce
Confidence 99999999998642 2346778889999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCC-----CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-----GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
.+.... .......||..|+|||++.. ...+.++|||||||++|||++|+.||......+
T Consensus 217 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~----------- 280 (353)
T PLN00034 217 ILAQTM-----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD----------- 280 (353)
T ss_pred eccccc-----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-----------
Confidence 653211 11223568999999998743 234568999999999999999999997322111
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
....+.......+ ......+...+.+++.+||+.+|++||++.|+++|-
T Consensus 281 ---~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 281 ---WASLMCAICMSQP---PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred ---HHHHHHHHhccCC---CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1111111111111 111123456788999999999999999999999874
No 99
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.5e-35 Score=335.42 Aligned_cols=256 Identities=19% Similarity=0.238 Sum_probs=201.1
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++ .++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 3568999999999999999999999999999999996432 23345678899999999999999999884 557
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++|+|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~Df 186 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEec
Confidence 788999999999999999875 2478888999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCC----CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG----NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~ 933 (1003)
|++........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||......
T Consensus 187 G~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------- 253 (370)
T cd05596 187 GTCMKMDANGM----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------- 253 (370)
T ss_pred cceeeccCCCc----ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH---------
Confidence 99976532211 111235699999999987653 4788999999999999999999999753210
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHHH
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSE--RIHMADAVKNL 991 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~L 991 (1003)
.....+.... .....+........+.+++.+|++.+|.+ ||++.|+++|-
T Consensus 254 ----~~~~~i~~~~----~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 254 ----GTYSKIMDHK----NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred ----HHHHHHHcCC----CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 0111111110 00011111123456778889999988987 99999998763
No 100
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.9e-36 Score=334.21 Aligned_cols=253 Identities=24% Similarity=0.288 Sum_probs=200.5
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 36889999999999999999999999999999997442 23456788999999999999999999884 45677
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~ 148 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRY----EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGS 148 (330)
T ss_pred EEEEECCCCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCC
Confidence 89999999999999999874 24689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccC------CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM------GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~ 933 (1003)
+..+..... .......||+.|+|||++. +..++.++||||+||++|||++|+.||......
T Consensus 149 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------- 215 (330)
T cd05601 149 AARLTANKM----VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA--------- 215 (330)
T ss_pred CeECCCCCc----eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH---------
Confidence 976533211 1122346899999999976 456788999999999999999999999653211
Q ss_pred hhCchhHHHHHHhhc-ccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 934 MALPEKVMEIVDFAL-LLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.....+..... ...| ........+..++..|++ +|++||+++++++|
T Consensus 216 ----~~~~~i~~~~~~~~~~-----~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 216 ----KTYNNIMNFQRFLKFP-----EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ----HHHHHHHcCCCccCCC-----CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 01111111100 0111 111234557788888997 99999999999875
No 101
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.6e-35 Score=330.16 Aligned_cols=243 Identities=24% Similarity=0.323 Sum_probs=195.8
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+++++.++||||+++++++ ..++..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999997432 23356778899999999999999999884 45678899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
|+++|+|.+++.. ...+++.+++.++.|++.|++|||+ . +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~ 147 (325)
T cd05594 76 YANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 147 (325)
T ss_pred CCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecC
Confidence 9999999999876 3468999999999999999999997 6 89999999999999999999999999987532
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... +...+.+
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--------------~~~~~~i 208 (325)
T cd05594 148 KD-----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------------EKLFELI 208 (325)
T ss_pred CC-----CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--------------HHHHHHH
Confidence 11 1112235699999999999999999999999999999999999999965321 1111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
......-| ......+.+++.+|++.+|++|+ +++++++|
T Consensus 209 ~~~~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 209 LMEEIRFP-------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred hcCCCCCC-------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 11111111 12345678899999999999996 89999876
No 102
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.3e-35 Score=327.52 Aligned_cols=248 Identities=23% Similarity=0.305 Sum_probs=196.7
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCC-CceeEeeeeeecccCCCCc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHR-NLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 779 (1003)
+|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|+++++.+.|+ +|+++++++ .+.+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 588899999999999999999999999999998743 233456788899999999765 577787773 45677
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.. .+.+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~ 147 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQ-----VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGM 147 (324)
T ss_pred EEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCc
Confidence 8999999999999999976 34688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
+...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... +
T Consensus 148 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------------~ 208 (324)
T cd05587 148 CKENIFG-----GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------------E 208 (324)
T ss_pred ceecCCC-----CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------------H
Confidence 8643211 11222356899999999999999999999999999999999999999753211 1
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM-----ADAVKN 990 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~-----~ev~~~ 990 (1003)
....+.......| ......+.+++.+|+..+|++|++. +++.++
T Consensus 209 ~~~~i~~~~~~~~-------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 209 LFQSIMEHNVSYP-------KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHHHcCCCCCC-------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1111111111111 1234567889999999999999976 566554
No 103
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.9e-35 Score=327.04 Aligned_cols=243 Identities=25% Similarity=0.329 Sum_probs=194.3
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||+||+|++..+++.||+|+++.. .....+.+..|.++++.. +||||+++++++ .+.+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 4699999999999999999999999998743 234456778898888877 699999999984 4567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 Ey~~~g~L~~~i~~-----~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 76 EFVNGGDLMFHIQK-----SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 147 (320)
T ss_pred cCCCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecC
Confidence 99999999999987 34689999999999999999999999 99999999999999999999999999987532
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+.+.+
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------------~~~~~i 208 (320)
T cd05590 148 FN-----GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--------------DLFEAI 208 (320)
T ss_pred cC-----CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------------HHHHHH
Confidence 11 11122356999999999999999999999999999999999999999753211 111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM------ADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~------~ev~~~ 990 (1003)
.......| ......+.+++.+|++.+|++||++ +++++|
T Consensus 209 ~~~~~~~~-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 209 LNDEVVYP-------TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred hcCCCCCC-------CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 11111111 1134567889999999999999998 666554
No 104
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=322.13 Aligned_cols=251 Identities=26% Similarity=0.336 Sum_probs=208.2
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc---chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG---SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.|+-.+.||+|+||.||-|++..+...||||.+....++ .+.++.+|++++++++|||++.+-||| -.+...
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCy-----Lre~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCY-----LREHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccccccee-----eccchH
Confidence 455668899999999999999999999999999755443 467899999999999999999999995 446667
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
|+|||||-| +-.|++.-+ ..++.+.++..|+.+.+.|++|||++ +.||||||+.|||+++.|.||++|||.|
T Consensus 102 WLVMEYClG-SAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 102 WLVMEYCLG-SASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred HHHHHHHhc-cHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccch
Confidence 999999966 888888876 46799999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccC---CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGM---GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
.+..+ ...++|||.|||||++. .+.|+-++||||+|++-.|+...++|.-.+
T Consensus 174 si~~P---------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM---------------- 228 (948)
T KOG0577|consen 174 SIMAP---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM---------------- 228 (948)
T ss_pred hhcCc---------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc----------------
Confidence 86533 23588999999999864 578999999999999999999999996433
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
..+..+..-+....|.-. ..+....|.+++..|++.-|.+|||.+++++|-...+
T Consensus 229 NAMSALYHIAQNesPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 229 NAMSALYHIAQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred hHHHHHHHHHhcCCCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 122333333333333222 3456678999999999999999999999998765443
No 105
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.3e-35 Score=327.54 Aligned_cols=246 Identities=22% Similarity=0.324 Sum_probs=194.8
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHH---HhcCCCCceeEeeeeeecccCCCC
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEAL---KNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|++++ +.++||||+++++++ ...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 677899999999999999999999999999997432 23345667776655 466899999999984 4567
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||+++++|..++.. +.+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFG 146 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCccc
Confidence 88999999999999988864 4689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
+++..... ........|++.|+|||.+.+..++.++||||+||++|||++|+.||......
T Consensus 147 ~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-------------- 207 (324)
T cd05589 147 LCKEGMGF-----GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-------------- 207 (324)
T ss_pred CCccCCCC-----CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------------
Confidence 98643221 11223457999999999999999999999999999999999999999753211
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
+....+.......| ..+...+.+++.+|++.+|++|| ++.+++++
T Consensus 208 ~~~~~i~~~~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 208 EVFDSIVNDEVRYP-------RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HHHHHHHhCCCCCC-------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 11111111111111 12345678899999999999999 56777664
No 106
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.3e-35 Score=320.58 Aligned_cols=257 Identities=30% Similarity=0.487 Sum_probs=209.2
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
...+|++.++||+|+||.||+|.+.. +..+|+|++..........+.+|+++++.++|||++++++++ .+....
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-----SVGEPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeE-----ecCCCe
Confidence 35678999999999999999999986 789999999866555567899999999999999999999985 445678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.+
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~ 151 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPE---GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLA 151 (261)
T ss_pred EEEEeecccCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccch
Confidence 99999999999999998643 45689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchh
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
....+.... .....++..|+|||...+..++.++||||+|+++|+|++ |+.||..... .+
T Consensus 152 ~~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--------------~~ 212 (261)
T cd05148 152 RLIKEDVYL-----SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--------------HE 212 (261)
T ss_pred hhcCCcccc-----ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--------------HH
Confidence 765432211 112346778999999988889999999999999999998 8999865321 11
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
..+.+.... +.+....+...+.+++.+||+.+|++||+++++.+.|+.+
T Consensus 213 ~~~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 213 VYDQITAGY------RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHHHhCC------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 111111111 1111123456788999999999999999999999999753
No 107
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.9e-35 Score=334.06 Aligned_cols=257 Identities=19% Similarity=0.249 Sum_probs=198.5
Q ss_pred HHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
...++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++ .+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~ 114 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----QD 114 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----Ec
Confidence 34578999999999999999999999999999999986422 22345688999999999999999999984 55
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
+...++||||+++|+|.+++.. ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~D 185 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLAD 185 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEe
Confidence 7788999999999999999975 2478889999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCC----CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHH
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG----NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFV 932 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~ 932 (1003)
||+|........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||......
T Consensus 186 FG~a~~~~~~~~----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-------- 253 (370)
T cd05621 186 FGTCMKMDETGM----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-------- 253 (370)
T ss_pred cccceecccCCc----eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--------
Confidence 999986532211 111245699999999998654 3778999999999999999999999653210
Q ss_pred HhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHHH
Q 001858 933 KMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSE--RIHMADAVKNL 991 (1003)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~L 991 (1003)
.....+++...... .+........+.+++.+|+..++.+ |+++.|+++|-
T Consensus 254 -----~~~~~i~~~~~~~~----~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 254 -----GTYSKIMDHKNSLN----FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred -----HHHHHHHhCCcccC----CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 01112221111111 1111123445667777778755443 88999999873
No 108
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.9e-35 Score=324.60 Aligned_cols=242 Identities=24% Similarity=0.341 Sum_probs=191.1
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||+||+|++..+++.||+|+++... ....+.+..|..++... +||||+++++++ ..++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 47999999999999999999999999997432 23345566677777655 899999999884 4567889999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 e~~~gg~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~ 147 (316)
T cd05592 76 EYLNGGDLMFHIQS-----SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENM 147 (316)
T ss_pred cCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECC
Confidence 99999999999976 34689999999999999999999999 99999999999999999999999999997542
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... +....+
T Consensus 148 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------------~~~~~i 208 (316)
T cd05592 148 NGE-----GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------------ELFDSI 208 (316)
T ss_pred CCC-----CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------------HHHHHH
Confidence 211 1222356899999999999989999999999999999999999999753211 111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHH-HHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMA-DAVK 989 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~-ev~~ 989 (1003)
. ...+.. ...+...+.+++.+|++.+|++||++. ++.+
T Consensus 209 ~---~~~~~~----~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 209 L---NDRPHF----PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred H---cCCCCC----CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1 111110 111245567889999999999999875 5544
No 109
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.5e-35 Score=349.45 Aligned_cols=269 Identities=23% Similarity=0.316 Sum_probs=206.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.++||+|+||.||+|++..+++.||+|+++.... ...++|.+|++++++++||||+++++++ .+++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~-----~d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSIC-----SDGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE-----eeCCE
Confidence 579999999999999999999998999999999874322 2346799999999999999999999985 34567
Q ss_pred eEEeeecccCCCHHHHHhhcCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeE
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQ------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 853 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~k 853 (1003)
.++||||+++|+|.+++...... .....++.+++.++.|+++|++|||+. +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999999753211 123456788899999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCc-------------cccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCc
Q 001858 854 VSDFGLAKFLFDRPI-------------QETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHT 920 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~-------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~ 920 (1003)
|+|||+++....... ...........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999986521100 0001111235699999999999999999999999999999999999999975
Q ss_pred ccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHhh
Q 001858 921 MFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-HMADAVKNLCAAREK 997 (1003)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-s~~ev~~~L~~~~~~ 997 (1003)
........ ......|.. .....+.+..+.+++.+|++.+|++|| +++++.+.|+...+.
T Consensus 234 ~~~~ki~~-----------------~~~i~~P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 234 KKGRKISY-----------------RDVILSPIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred cchhhhhh-----------------hhhccChhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 32211100 000011100 011123455678899999999999996 566777777766543
No 110
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-35 Score=318.93 Aligned_cols=256 Identities=20% Similarity=0.303 Sum_probs=202.9
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++|||++++++++. .+...+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEE
Confidence 357999999999999999999998899999999997555555567889999999999999999999853 456789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.. .+.+++.++..++.|++.|++|||+. +|+|||++|+||+++.++.++++|||++.
T Consensus 83 iv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~ 154 (267)
T cd06646 83 ICMEYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAA 154 (267)
T ss_pred EEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccce
Confidence 99999999999999975 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccC---CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGM---GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
...... .......|+..|+|||.+. ...++.++||||+||++|||++|+.||......+...
T Consensus 155 ~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~---------- 219 (267)
T cd06646 155 KITATI-----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---------- 219 (267)
T ss_pred eecccc-----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe----------
Confidence 653211 1122346889999999874 3457789999999999999999999985432211000
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
....... .+ ............+.+++.+||+.+|++||+++++++++
T Consensus 220 ---~~~~~~~--~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 220 ---LMSKSNF--QP-PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ---eeecCCC--CC-CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0000000 00 00111112345788999999999999999999998864
No 111
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.5e-35 Score=326.89 Aligned_cols=243 Identities=23% Similarity=0.308 Sum_probs=194.9
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
++||+|+||.||+|++..+++.||+|+++... ....+.+..|.++++.+ +||||+++++++ ..++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 46999999999999999899999999987432 33456678899998876 799999999984 4567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 76 E~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~ 147 (321)
T cd05591 76 EYVNGGDLMFQIQR-----SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGI 147 (321)
T ss_pred eCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecc
Confidence 99999999999976 34688999999999999999999999 99999999999999999999999999997532
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+
T Consensus 148 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--------------~~~~~i 208 (321)
T cd05591 148 LNG-----VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--------------DLFESI 208 (321)
T ss_pred cCC-----ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--------------HHHHHH
Confidence 211 1122356899999999999989999999999999999999999999753211 111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-------CHHHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-------HMADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-------s~~ev~~~ 990 (1003)
.......| ..+...+.+++.+|++.+|++|| ++++++++
T Consensus 209 ~~~~~~~p-------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 209 LHDDVLYP-------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HcCCCCCC-------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 11111111 11235678899999999999999 78888765
No 112
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.9e-35 Score=319.16 Aligned_cols=265 Identities=25% Similarity=0.449 Sum_probs=208.6
Q ss_pred hccCCccCeeeeccceEEEEEEE-----CCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNL-----GEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
..+|.+.+.||+|+||.||++.. ..++..+|+|.+........+.+.+|++++++++|||++++++++ ..
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~ 78 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----VE 78 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ec
Confidence 35788999999999999999986 234567999998755555567899999999999999999999985 34
Q ss_pred CCceEEeeecccCCCHHHHHhhcCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSND--------QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH 848 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~ 848 (1003)
....++||||+++++|.+++..... .....+++.+++.++.|++.|++|||++ +++||||||+||+++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~ 155 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGE 155 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 5678999999999999999976432 1123589999999999999999999999 9999999999999999
Q ss_pred CCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcch
Q 001858 849 DMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLT 927 (1003)
Q Consensus 849 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~ 927 (1003)
++.+|++|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--- 229 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTDY---YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--- 229 (288)
T ss_pred CCcEEeccCCccccccCCce---eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 99999999999976532211 111122345778999999998899999999999999999998 89998653211
Q ss_pred hhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 928 LHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
...+.+...... .. .......+.+++.+||+.+|.+||++.|+.+.|+.+.+.
T Consensus 230 -----------~~~~~i~~~~~~---~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 230 -----------EVIECITQGRVL---QR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred -----------HHHHHHHcCCcC---CC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111111111100 00 012245689999999999999999999999999988765
No 113
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-35 Score=305.91 Aligned_cols=259 Identities=28% Similarity=0.348 Sum_probs=209.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.+.|++.+.||+|.-|+||+++..+++..+|+|++.+.. .....+.+.|-+|++.+.||.+..++.. ++.+.
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~ 150 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDK 150 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eeccc
Confidence 356778899999999999999999999999999997554 3345677889999999999999999998 67788
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
+.++|||||+||+|....+++. ++.+++..++-++.+|+-||+|||-. |||+||+||+||||.++|++.++||.
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp---~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQP---GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCC---CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecc
Confidence 8999999999999999998865 67899999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCC---------------------------------c------------------cccCcccccccccccccCc
Q 001858 859 LAKFLFDRP---------------------------------I------------------QETSSSSIGIKGTVGYVAP 887 (1003)
Q Consensus 859 ~a~~~~~~~---------------------------------~------------------~~~~~~~~~~~gt~~y~aP 887 (1003)
++......+ . .........++||-.|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 986442100 0 0011233457899999999
Q ss_pred cccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHH
Q 001858 888 EYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVV 967 (1003)
Q Consensus 888 E~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~ 967 (1003)
|++.|...+.++|.|+|||++|||+.|+.||.+..+.+ -...++.+-+. .+...+......
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-------------Tl~NIv~~~l~------Fp~~~~vs~~ak 365 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-------------TLRNIVGQPLK------FPEEPEVSSAAK 365 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-------------hHHHHhcCCCc------CCCCCcchhHHH
Confidence 99999999999999999999999999999998754431 12222221111 111124456677
Q ss_pred HHHhhccccCCCCCCC----HHHHHHH
Q 001858 968 RIGVLCSMESPSERIH----MADAVKN 990 (1003)
Q Consensus 968 ~l~~~cl~~~p~~RPs----~~ev~~~ 990 (1003)
+++++.+..||++|.. ++||.+|
T Consensus 366 DLIr~LLvKdP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 366 DLIRKLLVKDPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred HHHHHHhccChhhhhccccchHHhhcC
Confidence 8888888888888887 7777665
No 114
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-34 Score=314.25 Aligned_cols=258 Identities=29% Similarity=0.471 Sum_probs=205.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCC---CceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGED---LLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.++|++.+.||+|+||+||+|.+... ...||||.++... ....+.|.+|+.++++++||||+++++++ ...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV-----TKS 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE-----ecC
Confidence 35789999999999999999998643 4579999987443 33356789999999999999999999984 446
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..++||||+++++|.+++... .+.+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++++||
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLREN----DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECcc
Confidence 6789999999999999999764 24789999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|+++........ .......++..|+|||...+..++.++||||+|+++|||++ |..||......
T Consensus 151 g~~~~~~~~~~~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~------------ 215 (266)
T cd05033 151 GLSRRLEDSEAT---YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ------------ 215 (266)
T ss_pred chhhcccccccc---eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH------------
Confidence 999876421111 11112335678999999998899999999999999999998 99998653211
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
...+.+...... + ....+...+.+++.+||+.+|++||++.|++++|.++
T Consensus 216 --~~~~~~~~~~~~-~-----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 216 --DVIKAVEDGYRL-P-----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --HHHHHHHcCCCC-C-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111111111111 1 1123356788999999999999999999999999875
No 115
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-36 Score=326.35 Aligned_cols=246 Identities=25% Similarity=0.399 Sum_probs=205.4
Q ss_pred eeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecccC
Q 001858 710 LIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQS 789 (1003)
Q Consensus 710 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 789 (1003)
++|+|.||+||.|++..+...+|||-+........+-+..|+...+.++|.|||+++|.+ ..+++.-+.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCCC
Confidence 699999999999999999999999999877777778899999999999999999999985 456778899999999
Q ss_pred CCHHHHHhhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC-CCCCeEEcccccccccccC
Q 001858 790 GSLEDWLQQSNDQVDGNL--NLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLAKFLFDR 866 (1003)
Q Consensus 790 gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~DfG~a~~~~~~ 866 (1003)
|+|.++++..- +++ .+..+--+.+||++|+.|||+. .|||||||-+|||+. -.|.+||+|||.++.+..
T Consensus 657 GSLSsLLrskW----GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg- 728 (1226)
T KOG4279|consen 657 GSLSSLLRSKW----GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG- 728 (1226)
T ss_pred CcHHHHHHhcc----CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc-
Confidence 99999998742 344 7777888999999999999999 999999999999996 578999999999987633
Q ss_pred CccccCcccccccccccccCccccCCC--CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 867 PIQETSSSSIGIKGTVGYVAPEYGMGG--NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 867 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.......+.||..|||||++..+ .|+.++|||||||++.||.||++||........ ...
T Consensus 729 ----inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---------------AMF 789 (1226)
T KOG4279|consen 729 ----INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---------------AMF 789 (1226)
T ss_pred ----CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---------------hhh
Confidence 22233457899999999999876 478899999999999999999999976543211 111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+..+.+ ..++.+++...+...++.+|..++|.+||+++++++.
T Consensus 790 kVGmyK---vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 790 KVGMYK---VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred hhccee---cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 111111 2234566777888899999999999999999999863
No 116
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=7.7e-35 Score=314.53 Aligned_cols=255 Identities=29% Similarity=0.498 Sum_probs=204.2
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++ .+.+..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCCcE
Confidence 467899999999999999999975 55679999876432 3357899999999999999999999884 4566789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.
T Consensus 78 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 151 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLAR 151 (261)
T ss_pred EEEecCCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccce
Confidence 9999999999999997643 45688899999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
........ ......++..|+|||+..++.++.++||||+||++|+|++ |+.||...... ..
T Consensus 152 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------------~~ 213 (261)
T cd05072 152 VIEDNEYT----AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--------------DV 213 (261)
T ss_pred ecCCCcee----ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--------------HH
Confidence 65432211 1112346778999999988889999999999999999998 99998653211 11
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
...+...... + ....+..++.+++.+|+..+|++||+++++.+.|+.
T Consensus 214 ~~~~~~~~~~-~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 214 MSALQRGYRM-P-----RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHcCCCC-C-----CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1111111111 1 111234568899999999999999999999999875
No 117
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.1e-35 Score=327.48 Aligned_cols=253 Identities=24% Similarity=0.299 Sum_probs=197.8
Q ss_pred cCCccCeeeeccceEEEEEEEC---CCCceEEEEEecccc----ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLG---EDLLPVAVKVINLKQ----KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 775 (1003)
+|++.+.||+|+||.||+|+.. .+++.||+|++.... ....+.+.+|+++++.+ +||+|++++++ +.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~-----~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYA-----FQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEE-----Ee
Confidence 4888999999999999999874 467899999986432 23345788899999999 59999999987 45
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEc
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 855 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~ 855 (1003)
.++..++||||+++|+|.+++.. ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~ 147 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQ-----RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLT 147 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEe
Confidence 56778999999999999999976 34689999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh
Q 001858 856 DFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM 934 (1003)
Q Consensus 856 DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~ 934 (1003)
|||+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||........
T Consensus 148 DfG~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------- 215 (332)
T cd05614 148 DFGLSKEFLSEEK----ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-------- 215 (332)
T ss_pred eCcCCccccccCC----CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--------
Confidence 9999976432211 112235699999999998765 478899999999999999999999964322111
Q ss_pred hCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 935 ALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
...+.......++.. .......+.+++.+|++.+|++|| ++++++++
T Consensus 216 -----~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 216 -----QSEVSRRILKCDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred -----HHHHHHHHhcCCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 011111111122211 112345678899999999999999 77788765
No 118
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2e-35 Score=318.14 Aligned_cols=251 Identities=33% Similarity=0.575 Sum_probs=193.5
Q ss_pred ccCeeeeccceEEEEEEEC----CCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 707 LSNLIGQGSFGFVYRGNLG----EDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 707 ~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+.+.||+|+||.||+|.+. ..+..|+||+++.... ...+.|.+|++.+++++||||++++|++. ..+..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-----~~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-----ENEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-----SSSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc-----cccccc
Confidence 4578999999999999997 3457899999964333 23689999999999999999999999974 344589
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++|+|.+++.... ...+++.+++.++.|+++|++|||+. +++|+||+++||+++.++.+||+|||++.
T Consensus 78 lv~e~~~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~ 151 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSR 151 (259)
T ss_dssp EEEE--TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGE
T ss_pred ccccccccccccccccccc---cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 9999999999999999852 35789999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
........ .......+...|+|||.+.+..++.++||||||+++|||++ |+.||..... .++
T Consensus 152 ~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--------------~~~ 214 (259)
T PF07714_consen 152 PISEKSKY---KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--------------EEI 214 (259)
T ss_dssp ETTTSSSE---EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--------------HHH
T ss_pred cccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccc--------------ccc
Confidence 66222111 11222446789999999988889999999999999999999 7888765421 111
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.+.+....... ....++..+.+++.+||+.+|++||++.++++.|
T Consensus 215 ~~~~~~~~~~~------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 215 IEKLKQGQRLP------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHTTEETT------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccccccccce------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 12222221111 1123456788999999999999999999999876
No 119
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-36 Score=326.54 Aligned_cols=256 Identities=25% Similarity=0.409 Sum_probs=208.7
Q ss_pred cCCccCeeeeccceEEEEEEECCC---CceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGED---LLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
+....++||+|.||.|++|.|... -..||||.++..... ...+|.+|+.+|.+++|||++++||+.. + ..
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl-----~-qp 184 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVL-----D-QP 184 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeec-----c-ch
Confidence 345568899999999999999643 356999999855544 6789999999999999999999999953 2 45
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
..+|||.++.|+|.+.+++.. ...+.......++.|||.|+.||.++ +.||||+..+|+++-....+||+|||+
T Consensus 185 ~mMV~ELaplGSLldrLrka~---~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGL 258 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAK---KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGL 258 (1039)
T ss_pred hhHHhhhcccchHHHHHhhcc---ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccc
Confidence 579999999999999999832 56788888999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
.+-+....... .......-...|+|||.+...+++.++|||+|||++|||++ |..||-+... .
T Consensus 259 mRaLg~ned~Y--vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------------~ 322 (1039)
T KOG0199|consen 259 MRALGENEDMY--VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------------I 322 (1039)
T ss_pred eeccCCCCcce--EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------------H
Confidence 99875433221 11112335678999999999999999999999999999999 8899876422 1
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+.+.+| ..++.+..+.|.+++++++..||..+|++||++.+|.+.+-.
T Consensus 323 qIL~~iD------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 323 QILKNID------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred HHHHhcc------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 2223333 123344456788999999999999999999999999866544
No 120
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.9e-35 Score=320.97 Aligned_cols=249 Identities=24% Similarity=0.314 Sum_probs=196.6
Q ss_pred eeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
||+|+||+||+|.+..+++.||+|.+..... ...+.+..|+++++.++||||+++.+++ ..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 6999999999999999999999999864322 2335678899999999999999999874 4567789999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++|+|.+++...... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 76 ~~g~L~~~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 151 (280)
T cd05608 76 NGGDLRYHIYNVDEE-NPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ 151 (280)
T ss_pred CCCCHHHHHHhcccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCC
Confidence 999999888653221 45789999999999999999999999 99999999999999999999999999997653322
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .........
T Consensus 152 -----~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-------------~~~~~~~~~ 213 (280)
T cd05608 152 -----SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-------------ENKELKQRI 213 (280)
T ss_pred -----ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-------------hHHHHHHhh
Confidence 11223568999999999999999999999999999999999999997532210 001111111
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
. ..+. .........+.+++.+|++.+|++|| +++|++++
T Consensus 214 ~-~~~~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 214 L-NDSV---TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred c-ccCC---CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 1 1110 11123456788999999999999999 77888875
No 121
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.1e-34 Score=312.26 Aligned_cols=251 Identities=30% Similarity=0.472 Sum_probs=199.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
++|++.+.||+|+||.||+|.++ ++..+|+|.+... ....+.+.+|++++++++||||+++++++ ..++..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVC-----TQQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEE-----ccCCCEEE
Confidence 56888999999999999999886 4567999988633 33356889999999999999999999985 34567899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++|+|.+++... .+.+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.++.
T Consensus 77 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 77 VTEFMENGCLLNYLRQR----QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccc
Confidence 99999999999999753 24588999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
....... ......++..|+|||...+..++.++||||+|+++|||++ |+.||...... +...
T Consensus 150 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-------------~~~~ 212 (256)
T cd05114 150 VLDDEYT----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-------------EVVE 212 (256)
T ss_pred cCCCcee----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-------------HHHH
Confidence 5332211 1112345678999999988889999999999999999999 89998653211 0111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.+........+ ......+.+++.+||+.+|++||+++|+++.|
T Consensus 213 ~i~~~~~~~~~-------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 213 MISRGFRLYRP-------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHCCCCCCCC-------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11111111111 11235688999999999999999999999876
No 122
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.3e-35 Score=324.28 Aligned_cols=242 Identities=24% Similarity=0.347 Sum_probs=192.3
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|.+++... +||+|+++++++ .+++..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 23445677788888765 899999999984 4567889999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 E~~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~ 147 (316)
T cd05620 76 EFLNGGDLMFHIQD-----KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENV 147 (316)
T ss_pred CCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecc
Confidence 99999999999976 35688999999999999999999999 99999999999999999999999999986432
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--------------~~~~~~~ 208 (316)
T cd05620 148 FG-----DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--------------DELFESI 208 (316)
T ss_pred cC-----CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------------HHHHHHH
Confidence 11 1122345689999999999999999999999999999999999999965321 1111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHH-HHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMA-DAVK 989 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~-ev~~ 989 (1003)
.. ..+.... ....++.+++.+|++.+|++||++. ++.+
T Consensus 209 ~~---~~~~~~~----~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 209 RV---DTPHYPR----WITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred Hh---CCCCCCC----CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 11 1111101 1245677899999999999999985 5553
No 123
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.9e-35 Score=333.23 Aligned_cols=266 Identities=24% Similarity=0.388 Sum_probs=206.9
Q ss_pred HhccCCccCeeeeccceEEEEEEECCC-----CceEEEEEeccccc-cchHHHHHHHHHHHhcC-CCCceeEeeeeeecc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGED-----LLPVAVKVINLKQK-GSIKSFVAECEALKNIR-HRNLIKIITVCSSID 773 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 773 (1003)
..++|++.++||+|+||.||+|++... +..||||+++.... ...+.+.+|+++++++. ||||+++++++
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~---- 110 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC---- 110 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE----
Confidence 456899999999999999999987432 34699999974432 33567999999999996 99999999995
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCCC---------------------------------------------------
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSNDQ--------------------------------------------------- 802 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 802 (1003)
.+....++||||+++|+|.+++......
T Consensus 111 -~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 111 -TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred -ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 3456789999999999999998764210
Q ss_pred ----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCC
Q 001858 803 ----------------------------------------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPS 842 (1003)
Q Consensus 803 ----------------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~ 842 (1003)
....+++.++..++.|++.|++|||+. +|+||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~ 266 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChH
Confidence 013478888999999999999999999 9999999999
Q ss_pred ceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcc
Q 001858 843 NVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTM 921 (1003)
Q Consensus 843 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~ 921 (1003)
||+++.++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSN---YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred hEEEeCCCEEEEEeCCcceecccccc---ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 99999999999999999976532211 111122456788999999988899999999999999999997 99998754
Q ss_pred cCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 922 FNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
..+. .....+..... ......+...+.+++.+||+.+|++||++.++.+.|+++.+
T Consensus 344 ~~~~-------------~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 344 IVDS-------------TFYNKIKSGYR------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred chhH-------------HHHHHHhcCCC------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 2211 11111111110 11112345678899999999999999999999999987643
No 124
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7e-35 Score=324.61 Aligned_cols=243 Identities=24% Similarity=0.324 Sum_probs=193.7
Q ss_pred CeeeeccceEEEEEEEC---CCCceEEEEEecccc----ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 709 NLIGQGSFGFVYRGNLG---EDLLPVAVKVINLKQ----KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|+++++.++||||+++++++ ..++..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeEE
Confidence 68999999999999873 467899999987432 22345678899999999999999999884 4466789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.. .+.+.+..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 77 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (323)
T cd05584 77 LILEYLSGGELFMHLER-----EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCK 148 (323)
T ss_pred EEEeCCCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCe
Confidence 99999999999999976 45678889999999999999999999 99999999999999999999999999987
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....
T Consensus 149 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-------------~~~~ 210 (323)
T cd05584 149 ESIHEG-----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-------------KTID 210 (323)
T ss_pred ecccCC-----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-------------HHHH
Confidence 532211 1122356899999999999888999999999999999999999999753210 0111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
....... .-| ......+.+++.+|++.+|++|| +++++.++
T Consensus 211 ~~~~~~~-~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 211 KILKGKL-NLP-------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHHcCCC-CCC-------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 1111111 111 12345678999999999999999 78888775
No 125
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-34 Score=315.20 Aligned_cols=259 Identities=24% Similarity=0.392 Sum_probs=203.0
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCc----eEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLL----PVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.+|++.+.||+|+||+||+|.+..+++ .||+|.+.... .....++..|+..++++.||||+++++++. .
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------G 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------C
Confidence 578889999999999999999976665 47777775332 223467788888999999999999999852 2
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++++||+++|+|.+++... .+.+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Df 153 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQH----RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADF 153 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCC
Confidence 3467899999999999999764 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|+++...+... ........++..|+|||+..++.++.++|||||||++|||++ |+.||.+...
T Consensus 154 g~~~~~~~~~~---~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------------- 217 (279)
T cd05111 154 GVADLLYPDDK---KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP------------- 217 (279)
T ss_pred ccceeccCCCc---ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------------
Confidence 99986543221 111223457789999999988899999999999999999998 9999865421
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
....+.+........ ...+...+..++.+||+.+|++||++.|+.+.|..+.+.
T Consensus 218 -~~~~~~~~~~~~~~~------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 218 -HEVPDLLEKGERLAQ------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred -HHHHHHHHCCCcCCC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 112222222211111 011234567889999999999999999999999886654
No 126
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.2e-35 Score=323.54 Aligned_cols=242 Identities=24% Similarity=0.367 Sum_probs=192.2
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||+||+|++..+++.||+|+++... ....+.+..|..+++.. +||||+++++++ .+++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF-----QTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 23445677788888765 899999999984 4566789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ey~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 147 (316)
T cd05619 76 EYLNGGDLMFHIQS-----CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENM 147 (316)
T ss_pred eCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECC
Confidence 99999999999976 34688999999999999999999999 99999999999999999999999999987432
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+
T Consensus 148 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------------~~~~~i 208 (316)
T cd05619 148 LGD-----AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--------------ELFQSI 208 (316)
T ss_pred CCC-----CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--------------HHHHHH
Confidence 111 1122356899999999999989999999999999999999999999753211 111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHH-HHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMA-DAVK 989 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~-ev~~ 989 (1003)
.. ..+... ......+.+++.+|++.+|++||++. ++.+
T Consensus 209 ~~---~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 209 RM---DNPCYP----RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred Hh---CCCCCC----ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 11 111100 11345677889999999999999997 6654
No 127
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.7e-35 Score=327.55 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=196.5
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
++||+|+||.||+|++..+++.||+|+++... ....+.+.+|..+++.+ +||||+++++++ ......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 47999999999999999999999999997432 23346688899999998 799999999984 4567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 e~~~~g~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 76 EFVSGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI 147 (329)
T ss_pred eCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccc
Confidence 99999999999876 35789999999999999999999999 99999999999999999999999999986421
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||......+.... ...+...+.+
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~-----~~~~~~~~~~ 217 (329)
T cd05588 148 RP-----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ-----NTEDYLFQVI 217 (329)
T ss_pred cC-----CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccc-----cchHHHHHHH
Confidence 11 1122235799999999999999999999999999999999999999974322110000 0001111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC------HHHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH------MADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs------~~ev~~~ 990 (1003)
......-| ..+...+.+++.+|++.+|++||+ ++|+++|
T Consensus 218 ~~~~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 218 LEKQIRIP-------RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HcCCCCCC-------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 11111111 123456788999999999999997 6777754
No 128
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.2e-34 Score=312.19 Aligned_cols=251 Identities=23% Similarity=0.309 Sum_probs=204.8
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|++|.||+|.+..+++.||+|.+... .....+.+.+|+++++.++|||++++++++ ..++..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF-----LDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeee-----ccCCEEE
Confidence 477889999999999999999999999999998643 234467889999999999999999999984 4467789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.
T Consensus 76 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~ 149 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAK 149 (256)
T ss_pred EEEEeCCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccce
Confidence 9999999999999998743 35789999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......|++.|+|||+..+..++.++|+||+|+++|||++|+.||...... ..
T Consensus 150 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------------~~- 209 (256)
T cd08529 150 LLSDNT-----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--------------AL- 209 (256)
T ss_pred eccCcc-----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--------------HH-
Confidence 654321 1122346889999999999988999999999999999999999998653210 00
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
......... ......+...+.+++.+||+.+|++||++.+++++
T Consensus 210 --~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 210 --ILKIIRGVF---PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --HHHHHcCCC---CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 111111111 11111345678999999999999999999999875
No 129
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.7e-35 Score=327.35 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=195.3
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++ ..++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 4799999999999999999999999999743 223345678899888877 899999999984 4567889999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 E~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 76 EYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 147 (329)
T ss_pred eCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCcccccc
Confidence 99999999999876 35689999999999999999999999 99999999999999999999999999997532
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||........... .......+.+
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~-----~~~~~~~~~i 217 (329)
T cd05618 148 RP-----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-----NTEDYLFQVI 217 (329)
T ss_pred CC-----CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccc-----ccHHHHHHHH
Confidence 11 1112235789999999999999999999999999999999999999964322111000 0000111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC------HHHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH------MADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs------~~ev~~~ 990 (1003)
......-| ......+.+++.+|++.+|++||+ ++++++|
T Consensus 218 ~~~~~~~p-------~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 218 LEKQIRIP-------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred hcCCCCCC-------CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 11111111 123456778999999999999998 4677655
No 130
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.2e-34 Score=318.15 Aligned_cols=265 Identities=28% Similarity=0.493 Sum_probs=209.3
Q ss_pred hccCCccCeeeeccceEEEEEEECC-----CCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
.++|.+.+.||+|+||.||+|.+.. ++..+|+|.++.......+.+.+|++++++++||||+++++++ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~ 78 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC-----GD 78 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE-----cc
Confidence 3568888999999999999998642 4456999998755555557899999999999999999999985 34
Q ss_pred CCceEEeeecccCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceE
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSND-----------QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVL 845 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nil 845 (1003)
....++||||+++++|.+++..+.. ...+.+++.+++.++.|++.|++|||++ +|+||||||+||+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 155 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCL 155 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEE
Confidence 5678999999999999999976532 1234689999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 001858 846 LDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFND 924 (1003)
Q Consensus 846 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~ 924 (1003)
++.++.++++|||++......... .......++..|+|||+..+..++.++||||+||++|||++ |+.||......
T Consensus 156 ~~~~~~~~l~dfg~a~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 232 (291)
T cd05094 156 VGANLLVKIGDFGMSRDVYSTDYY---RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 232 (291)
T ss_pred EccCCcEEECCCCcccccCCCcee---ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999765332211 11123446788999999998999999999999999999999 99998653211
Q ss_pred cchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 925 GLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
...+.+....... ....++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 233 --------------~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 233 --------------EVIECITQGRVLE------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred --------------HHHHHHhCCCCCC------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111111111110 0112345788999999999999999999999999998664
No 131
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=7.5e-35 Score=324.50 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=196.4
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
+|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+..|.+++... +|++|+++++++ .+.+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 4788999999999999999999999999999987432 23345677788888877 589999998884 45677
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.. .+.+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~ 147 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQ-----VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCC
Confidence 8999999999999999976 34688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .
T Consensus 148 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--------------~ 208 (323)
T cd05616 148 CKENMWDG-----VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------------E 208 (323)
T ss_pred ceecCCCC-----CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--------------H
Confidence 97532111 1122356899999999999999999999999999999999999999753211 1
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM-----ADAVKN 990 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~-----~ev~~~ 990 (1003)
....+......-| ......+.+++.+|++.+|++|++. .++.++
T Consensus 209 ~~~~i~~~~~~~p-------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 209 LFQSIMEHNVAYP-------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHHHhCCCCCC-------CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 1111111111111 1234567889999999999999974 566543
No 132
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.2e-35 Score=325.18 Aligned_cols=238 Identities=29% Similarity=0.317 Sum_probs=188.1
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHH-HHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECE-ALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||+||+|++..+++.||+|++.... ....+.+..|.. +++.++||||+++++++ .+.+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999987432 223345555555 56788999999999884 4567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.++++. .+.+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 76 e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~ 147 (323)
T cd05575 76 DYVNGGELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (323)
T ss_pred cCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccc
Confidence 99999999999976 45688999999999999999999999 99999999999999999999999999987532
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+..
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----------------~~~~ 205 (323)
T cd05575 148 EH-----SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----------------AEMY 205 (323)
T ss_pred cC-----CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----------------HHHH
Confidence 21 1122235689999999999999999999999999999999999999965321 1111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMA 985 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ 985 (1003)
+.......... ......+.+++.+|++.+|++||++.
T Consensus 206 ~~i~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 206 DNILNKPLRLK----PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHcCCCCCC----CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11111111111 11245678899999999999999884
No 133
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-34 Score=327.74 Aligned_cols=273 Identities=21% Similarity=0.212 Sum_probs=202.8
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecc-cCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSID-FKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 777 (1003)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.++||||+++++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 357899999999999999999999989999999998643 2334567889999999999999999999864322 1223
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++ ++.+.+.. .+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecC
Confidence 457999999976 67776643 478888999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh--
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-- 935 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-- 935 (1003)
|+++..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||......+ .+.......
T Consensus 168 g~a~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~ 240 (359)
T cd07876 168 GLARTACTN------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID-QWNKVIEQLGT 240 (359)
T ss_pred CCccccccC------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCC
Confidence 999754221 11223568999999999999999999999999999999999999997643211 111111110
Q ss_pred Cchh----HHHHHHhhcccCCCCchhh----------------HHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 936 LPEK----VMEIVDFALLLDPGNERAK----------------IEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 936 ~~~~----~~~~i~~~l~~~~~~~~~~----------------~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.... ....+.......+...... .......+.+++.+|++.+|++|||++|+++|-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 241 PSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred CcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0000 1111111111111100000 011235678999999999999999999999874
No 134
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-34 Score=316.64 Aligned_cols=271 Identities=25% Similarity=0.360 Sum_probs=205.9
Q ss_pred ccCCccCeeeeccceEEEEEEE----CCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNL----GEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.+|++.+.||+|+||.||+|.. ..++..||+|.+........+.+.+|++++++++||||+++++++.. .+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCCC
Confidence 5788999999999999999984 45678999999876655556789999999999999999999997642 3345
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++|+||+++++|.+++... ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg 153 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKH----RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFG 153 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCc
Confidence 689999999999999999764 24589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh---
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA--- 935 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~--- 935 (1003)
+++........ ........++..|+|||+..+..++.++||||+||++|||++|..|+...... ........
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~ 228 (284)
T cd05081 154 LTKVLPQDKEY--YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQG 228 (284)
T ss_pred ccccccCCCcc--eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhccccccc
Confidence 99866432111 00111122445699999998888999999999999999999988775432211 00000000
Q ss_pred --CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 936 --LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 936 --~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
....+.+.+.... +.+....+...+.+++.+||+++|++|||+.|+++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 229 QMIVYHLIELLKNNG------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred ccchHHHHHHHhcCC------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0011111111111 1111123356788999999999999999999999999875
No 135
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.2e-35 Score=331.71 Aligned_cols=262 Identities=18% Similarity=0.243 Sum_probs=201.2
Q ss_pred HHHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeee
Q 001858 695 YAELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSS 771 (1003)
Q Consensus 695 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 771 (1003)
..+.....++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-- 112 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 112 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 3344455689999999999999999999999999999999986422 23345678899999999999999999884
Q ss_pred cccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCC
Q 001858 772 IDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 851 (1003)
Q Consensus 772 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~ 851 (1003)
.++...++||||+++|+|.+++.. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ 180 (371)
T cd05622 113 ---QDDRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 180 (371)
T ss_pred ---EcCCEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCC
Confidence 456788999999999999999975 2478889999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCCC----CCCccccchhHHHHHHHHHhCCCCCCcccCCcch
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG----NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLT 927 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~ 927 (1003)
+||+|||+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||......
T Consensus 181 ikL~DfG~a~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--- 253 (371)
T cd05622 181 LKLADFGTCMKMNKEGM----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--- 253 (371)
T ss_pred EEEEeCCceeEcCcCCc----ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH---
Confidence 99999999986533211 112235699999999998654 3788999999999999999999999753210
Q ss_pred hhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHHH
Q 001858 928 LHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSE--RIHMADAVKNL 991 (1003)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~L 991 (1003)
.....+.. .......+........+..++.+|+..++.+ ||+++|+.++.
T Consensus 254 ----------~~~~~i~~----~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 254 ----------GTYSKIMN----HKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ----------HHHHHHHc----CCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 00111111 1000001111223455677888888744433 78999999875
No 136
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8e-35 Score=323.38 Aligned_cols=243 Identities=23% Similarity=0.299 Sum_probs=195.5
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||+||+|++..+++.||+|+++... ......+..|.++++.+ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999999899999999997432 33456778899999888 799999999984 4567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 76 EYVNGGDLMFHIQR-----SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGI 147 (318)
T ss_pred cCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecC
Confidence 99999999999876 34689999999999999999999999 99999999999999999999999999986432
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+
T Consensus 148 ~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------------~~~~~i 208 (318)
T cd05570 148 LGG-----VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------------ELFQSI 208 (318)
T ss_pred cCC-----CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------------HHHHHH
Confidence 111 1122356899999999999999999999999999999999999999653211 111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM-----ADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~-----~ev~~~ 990 (1003)
.......| ..+...+.+++.+|++.+|++||++ .+++++
T Consensus 209 ~~~~~~~~-------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 209 LEDEVRYP-------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HcCCCCCC-------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 11110111 1234567899999999999999999 888764
No 137
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.5e-35 Score=317.80 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=203.9
Q ss_pred HHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCC-C
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKG-D 777 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-~ 777 (1003)
.+.+.|++.+.||+|+||+||+|.+..+++.||+|++.... .....+.+|+.+++++ +|||++++++++......+ .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35678999999999999999999999899999999987443 3346788999999998 7999999999975433221 3
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 56789999999999999998643 34688999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccC-----CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHH
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM-----GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFV 932 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~ 932 (1003)
|++...... ........|+..|+|||++. +..++.++||||+||++|||++|+.||........
T Consensus 156 g~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~------ 224 (272)
T cd06637 156 GVSAQLDRT-----VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA------ 224 (272)
T ss_pred CCceecccc-----cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH------
Confidence 999754321 11223456899999999876 34578899999999999999999999864321100
Q ss_pred HhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 933 KMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...... .+ .+......+...+.+++.+||..+|++||++.|++++
T Consensus 225 --------~~~~~~----~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 225 --------LFLIPR----NP-APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred --------HHHHhc----CC-CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 000000 00 0011111234568899999999999999999999875
No 138
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8.4e-35 Score=335.90 Aligned_cols=273 Identities=23% Similarity=0.309 Sum_probs=198.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc---CCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF---KGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~~ 778 (1003)
..+|++.++||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++....+ ....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999999899999999885321 334579999999999999999887643322 2223
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-CeEEccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDF 857 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Df 857 (1003)
+.++||||+++ ++.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~-~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARN-NHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 56799999985 788877653222 45789999999999999999999999 999999999999999665 7999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA- 935 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~- 935 (1003)
|+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|++||.+....+ .+.......
T Consensus 216 Gla~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~ 288 (440)
T PTZ00036 216 GSAKNLLAGQ------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLG 288 (440)
T ss_pred ccchhccCCC------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Confidence 9998653221 12235689999999987664 68999999999999999999999997643221 111111110
Q ss_pred -CchhHHHHHHhhcc--cCCCCchh-----hHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 -LPEKVMEIVDFALL--LDPGNERA-----KIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 -~~~~~~~~i~~~l~--~~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...+.......... .-|..... .....+.++.+++.+|++.+|++||++.|+++|
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 01110000000000 00000000 011234578899999999999999999999975
No 139
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9.4e-35 Score=317.44 Aligned_cols=260 Identities=30% Similarity=0.507 Sum_probs=205.5
Q ss_pred hccCCccCeeeeccceEEEEEEECC-----CCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 775 (1003)
..+|.+.+.||+|+||.||+|.+.. +++.||+|.++..... ..+.+.+|++++++++|||++++++++ .
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~ 78 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVC-----T 78 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEE-----e
Confidence 3568889999999999999998743 3578999998754433 457899999999999999999999985 3
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEe
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSND---------QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLL 846 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill 846 (1003)
.....++||||+++++|.+++..... .....+++.++..++.|++.|++|||+. +++||||||+||++
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 45778999999999999999987532 1234688999999999999999999999 99999999999999
Q ss_pred CCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCc
Q 001858 847 DHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDG 925 (1003)
Q Consensus 847 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~ 925 (1003)
+.++.+|++|||.++........ .......+++.|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~- 231 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYY---RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE- 231 (280)
T ss_pred cCCCeEEECCcccceecccCcce---ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 99999999999999754322111 11122346788999999999999999999999999999998 99998653221
Q ss_pred chhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 926 LTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
...+.+.......+ .......+.+++.+||+.+|++||++.|+++.|+
T Consensus 232 -------------~~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 -------------EVIECITQGRLLQR------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -------------HHHHHHHcCCcCCC------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11111221111111 1123567889999999999999999999999875
No 140
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.1e-34 Score=314.79 Aligned_cols=260 Identities=28% Similarity=0.466 Sum_probs=203.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCc---eEEEEEeccc-cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLL---PVAVKVINLK-QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.+|++.+.||+|+||.||+|.+..+++ .||+|+++.. .....+.|..|+.+++.++||||+++++++ .++.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCC
Confidence 458889999999999999999876554 5999998744 233457899999999999999999999984 4566
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||+++++|.+++... .+.+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg 151 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFG 151 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCc
Confidence 789999999999999999764 34689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
++....................+..|+|||+..+..++.++||||+||++|||++ |..||......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~------------- 218 (269)
T cd05065 152 LSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ------------- 218 (269)
T ss_pred cccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-------------
Confidence 9976543221111111111112457999999998999999999999999999887 99998653211
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
...+.+..... .+...+++..+.+++.+||+.+|++||++++++..|+++
T Consensus 219 -~~~~~i~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 219 -DVINAIEQDYR------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -HHHHHHHcCCc------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111111111 111123456688999999999999999999999998764
No 141
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.3e-34 Score=314.83 Aligned_cols=271 Identities=25% Similarity=0.313 Sum_probs=204.9
Q ss_pred CCccCeeeeccceEEEEEEE----CCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 705 FSLSNLIGQGSFGFVYRGNL----GEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
|++.+.||+|+||+||++.. ..+++.||+|+++.... ...+.+.+|++++++++||||+++++++.. .....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCCce
Confidence 38889999999999988653 34677899999875432 345678899999999999999999998643 33456
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++++|.+++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 83 ~~lv~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~ 153 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 153 (283)
T ss_pred EEEEecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccc
Confidence 7899999999999999975 2589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH-hhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK-MALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~-~~~~~ 938 (1003)
++......... .......++..|+|||...+..++.++||||+|+++|||++|+.||......-........ .....
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05080 154 AKAVPEGHEYY--RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVV 231 (283)
T ss_pred ccccCCcchhh--ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchh
Confidence 98654322110 1111223567799999998888999999999999999999999998654321111100000 00011
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
...+.++.... .+....++..+.+++.+||+++|++||+++++++.|+++.
T Consensus 232 ~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 232 RLIELLERGMR------LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhcCCC------CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 12222221111 1111234567899999999999999999999999998875
No 142
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.2e-34 Score=313.07 Aligned_cols=264 Identities=26% Similarity=0.424 Sum_probs=202.5
Q ss_pred CCccCeeeeccceEEEEEEECCCCc--eEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc-CCCCc
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLL--PVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF-KGDDF 779 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 779 (1003)
|.+.+.||+|+||.||+|.+..++. .||+|.++.. .....+.+.+|+++++.++||||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999999876654 6999988643 23345788999999999999999999998743221 12335
Q ss_pred eEEeeecccCCCHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSND-QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
.++++||+++|+|.+++...+. .....+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 6899999999999998854322 1134589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
+++.+....... ......+++.|+|||+..+..++.++||||+||++|||++ |+.||......
T Consensus 158 ~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------------- 221 (272)
T cd05075 158 LSKKIYNGDYYR---QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS------------- 221 (272)
T ss_pred cccccCccccee---cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-------------
Confidence 998664322111 1122346778999999999999999999999999999999 88898653211
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
+..+.+...... .....+...+.+++.+||+.+|++||++.|+++.|+.+
T Consensus 222 -~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 222 -EIYDYLRQGNRL------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -HHHHHHHcCCCC------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111111111000 01112345688999999999999999999999999864
No 143
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7.7e-35 Score=315.70 Aligned_cols=262 Identities=22% Similarity=0.321 Sum_probs=208.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||.||+|.+..+++.||||.+.... ....+++.+|+++++.++|||++++++++ .+++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF-----IEDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhhee-----EeCCe
Confidence 46888999999999999999998899999999876432 22346888999999999999999999985 34667
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.+++|||+++++|.+++...... ...+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++++|||+
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~ 152 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQ-KRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGL 152 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchh
Confidence 89999999999999998753322 45689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
+....... .......|+..|+|||+..+..++.++||||+|+++|+|++|..||.....+..
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------------- 214 (267)
T cd08229 153 GRFFSSKT-----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY------------- 214 (267)
T ss_pred hhccccCC-----cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-------------
Confidence 87653321 111234688999999999888899999999999999999999999864322100
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
+..+......... .........+.+++.+||+.+|++||++.+|++.++++.
T Consensus 215 --~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 215 --SLCKKIEQCDYPP--LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred --HHhhhhhcCCCCC--CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1111111111100 011234567889999999999999999999999998764
No 144
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3e-34 Score=312.18 Aligned_cols=264 Identities=27% Similarity=0.446 Sum_probs=204.6
Q ss_pred CCccCeeeeccceEEEEEEECCC---CceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc-CCCC
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGED---LLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF-KGDD 778 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 778 (1003)
|.+.+.||+|+||.||+|....+ +..||+|.++... ......+.+|++.++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56789999999999999998643 4789999987433 2334678999999999999999999998654332 2334
Q ss_pred ceEEeeecccCCCHHHHHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQ-VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
..++|+||+++|+|.+++...... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 578999999999999998664321 234689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|+++.......... .....++..|+|||++.+..++.++||||+||++|||++ |..||......
T Consensus 158 g~~~~~~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~------------ 222 (273)
T cd05035 158 GLSKKIYSGDYYRQ---GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH------------ 222 (273)
T ss_pred cceeeccccccccc---cccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 99986643321111 112235678999999988889999999999999999999 88888653221
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
+..+.+... .. ......+...+.+++.+||+.+|++||++.|++++|+.+
T Consensus 223 --~~~~~~~~~---~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 223 --EIYDYLRHG---NR---LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred --HHHHHHHcC---CC---CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111111111 11 011123456789999999999999999999999999865
No 145
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-35 Score=321.01 Aligned_cols=254 Identities=26% Similarity=0.330 Sum_probs=213.3
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc---chHHHHHHHHHHHhcC-CCCceeEeeeeeecccCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG---SIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 776 (1003)
....|++.+.||+|.||.||+++.+.+|+.+|+|++.+.... ..+...+|+++++.+. |||||.+.++ +++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~-----~e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA-----FED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE-----EEc
Confidence 356799999999999999999999999999999999755432 4568999999999998 9999999999 566
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC----CCe
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD----MVA 852 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~----~~~ 852 (1003)
....++|||+++||.|.+.+... .+++.++..++.|++.|++|||+. ||+|||+||+|+|+... +.+
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcE
Confidence 77899999999999999999874 399999999999999999999999 99999999999999643 479
Q ss_pred EEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHH
Q 001858 853 HVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFV 932 (1003)
Q Consensus 853 kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~ 932 (1003)
|++|||+|....+ .......+||+.|+|||++....|+..+||||+|+++|.|++|..||.+.......
T Consensus 179 k~~DFGla~~~~~------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~----- 247 (382)
T KOG0032|consen 179 KLIDFGLAKFIKP------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF----- 247 (382)
T ss_pred EEeeCCCceEccC------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH-----
Confidence 9999999987643 22334578999999999999999999999999999999999999999875432111
Q ss_pred HhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 933 KMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
. .....++.-..+.++.......+++..++..+|.+|++++++++|-
T Consensus 248 --------~----~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~Hp 294 (382)
T KOG0032|consen 248 --------L----AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHP 294 (382)
T ss_pred --------H----HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCc
Confidence 1 1222222333444556677788899999999999999999999974
No 146
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.5e-34 Score=314.90 Aligned_cols=247 Identities=25% Similarity=0.294 Sum_probs=193.5
Q ss_pred eeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
||+|+||+||+++...+++.||+|.+.... ....+.+..|++++++++||||+++++++ ..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999999999999999986322 22234566799999999999999999884 4567889999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 76 ~g~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~ 149 (277)
T cd05607 76 NGGDLKYHIYNVG---ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK 149 (277)
T ss_pred CCCCHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc
Confidence 9999999886543 34588999999999999999999999 99999999999999999999999999997653221
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
......|+..|+|||++.+..++.++||||+||++|||++|+.||........ ..+.....
T Consensus 150 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-------------~~~~~~~~ 210 (277)
T cd05607 150 ------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-------------KEELKRRT 210 (277)
T ss_pred ------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-------------HHHHHHHh
Confidence 11234689999999999988899999999999999999999999865321100 01111111
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
....... .......++.+++.+|++.+|++||+++|++++
T Consensus 211 ~~~~~~~---~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 211 LEDEVKF---EHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred hcccccc---ccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 1111100 011234567899999999999999999766543
No 147
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.3e-34 Score=309.89 Aligned_cols=262 Identities=21% Similarity=0.316 Sum_probs=209.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++|++++++++++ ..++.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~-----~~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASF-----IENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeee-----ecCCe
Confidence 57899999999999999999999899999999886322 23356899999999999999999999985 34567
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++++|.+++...... ...+++.+++.++.+++.|++|||+. +|+||||+|+||+++.++.++++|||+
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~ 152 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQ-KRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGL 152 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhccc-CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccce
Confidence 89999999999999999764322 45689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
+....... .......++..|+|||...+..++.++||||+||++|+|++|+.||...... .
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~----------- 213 (267)
T cd08224 153 GRFFSSKT-----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---L----------- 213 (267)
T ss_pred eeeccCCC-----cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc---H-----------
Confidence 87653321 1112345888999999998888999999999999999999999998543211 1
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
.+..+......... ...+.....+.+++.+||+.+|++||++.++++.++.++
T Consensus 214 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 214 -YSLCKKIEKCDYPP--LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -HHHHhhhhcCCCCC--CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11111111100000 001234557889999999999999999999999998765
No 148
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-34 Score=318.45 Aligned_cols=264 Identities=26% Similarity=0.401 Sum_probs=205.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCc--eEEEEEeccc-cccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLL--PVAVKVINLK-QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 778 (1003)
++|++.+.||+|+||.||+|....++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++ ....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC-----ENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE-----ccCC
Confidence 578999999999999999999876654 4788887632 233456789999999999 799999999985 3456
Q ss_pred ceEEeeecccCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQ-----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 847 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~ 847 (1003)
..++|+||+++++|.+++...... ....+++.+++.++.|++.|++|||++ +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 789999999999999999764321 123588999999999999999999999 999999999999999
Q ss_pred CCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcc
Q 001858 848 HDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGL 926 (1003)
Q Consensus 848 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~ 926 (1003)
.++.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 154 ~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-- 225 (297)
T cd05089 154 ENLASKIADFGLSRGEEVY------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-- 225 (297)
T ss_pred CCCeEEECCcCCCccccce------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 9999999999998632110 01111223567999999988889999999999999999997 99998654211
Q ss_pred hhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhhhc
Q 001858 927 TLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKYKG 1000 (1003)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~~~ 1000 (1003)
+..+.+...... .....+...+.+++.+||+.+|.+||+++++++.|+.+.+++++
T Consensus 226 ------------~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 226 ------------ELYEKLPQGYRM------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred ------------HHHHHHhcCCCC------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111111111111 01122346788999999999999999999999999988877654
No 149
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9e-35 Score=316.91 Aligned_cols=260 Identities=24% Similarity=0.435 Sum_probs=202.3
Q ss_pred HhccCCccCeeeeccceEEEEEEECC-----CCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 774 (1003)
..++|++.+.||+|+||.||+|.+.+ ++..||+|++.... ......+.+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~----- 78 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV----- 78 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 46789999999999999999998742 34679999986432 22345788999999999999999999985
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQ-----VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 849 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~ 849 (1003)
......++||||+++++|.+++...... .....++.++..++.|++.|++|||+. +++||||||+||+++.+
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 4456789999999999999999764321 123467889999999999999999999 99999999999999999
Q ss_pred CCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchh
Q 001858 850 MVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTL 928 (1003)
Q Consensus 850 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~ 928 (1003)
+.++++|||+++.......... .....++..|+|||++.++.++.++|||||||++|||++ |..||.....
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~----- 227 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYRK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN----- 227 (277)
T ss_pred CCEEECCCCCccccCCcceeec---CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----
Confidence 9999999999976533221111 112345788999999998899999999999999999999 7888865321
Q ss_pred hHHHHhhCchhHHHHH-HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 929 HGFVKMALPEKVMEIV-DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 929 ~~~~~~~~~~~~~~~i-~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+...+.+ .......+ ..+...+.+++.+|++.+|++||++.|+++.++
T Consensus 228 ---------~~~~~~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 228 ---------EQVLRFVMEGGLLDKP-------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ---------HHHHHHHHcCCcCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1111111 11111111 123457889999999999999999999999875
No 150
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.5e-34 Score=318.60 Aligned_cols=267 Identities=21% Similarity=0.341 Sum_probs=203.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCCC----------------ceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCcee
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDL----------------LPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIK 764 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~----------------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 764 (1003)
..+|++.+.||+|+||.||+|.+...+ ..||+|++.... ....+.+.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 467999999999999999999876433 458999987443 234578899999999999999999
Q ss_pred EeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecc
Q 001858 765 IITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQV------DGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGD 838 (1003)
Q Consensus 765 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 838 (1003)
+++++. .++..++|+||+++++|.+++....... ...+++..++.++.|++.|++|||+. +|+|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 999853 4567899999999999999998754222 23689999999999999999999999 999999
Q ss_pred CCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh--CCC
Q 001858 839 LKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT--GRR 916 (1003)
Q Consensus 839 ikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~--g~~ 916 (1003)
|||+||+++.++.++++|||+++........ .......++..|+|||+..+..++.++|||||||++|||++ |..
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 232 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYY---RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQ 232 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcce---eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCC
Confidence 9999999999999999999999765332211 11123446788999999888889999999999999999998 667
Q ss_pred CCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 917 PTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 917 P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
||......+ .+................+....++.++.+++.+|++.+|++||++.|+++.|+
T Consensus 233 p~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 233 PYEHLTDQQ-------------VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCCcChHH-------------HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 775432110 011111100000000001111223467899999999999999999999998875
No 151
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.1e-34 Score=309.89 Aligned_cols=252 Identities=27% Similarity=0.457 Sum_probs=200.1
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
.+|++.+.||+|+||+||+|.+.+ +..||+|.+... ....+.|.+|++++++++||||+++++++. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCT-----KQRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEc-----cCCCcEE
Confidence 468889999999999999998864 456999988733 333567999999999999999999999863 3556799
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++|+|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+|++|||.++.
T Consensus 77 v~e~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~ 149 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG----KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCcccee
Confidence 999999999999997642 3689999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
..+.... ......++..|+|||...+..++.++|||||||++|||++ |+.||...... ...
T Consensus 150 ~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------------~~~ 211 (256)
T cd05113 150 VLDDEYT----SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------------ETV 211 (256)
T ss_pred cCCCcee----ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------------HHH
Confidence 5433211 1112346678999999988889999999999999999998 99998653211 111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+.+...... + . .......+.+++.+||+.+|++||++.++++.++
T Consensus 212 ~~~~~~~~~-~--~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 212 EKVSQGLRL-Y--R---PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHhcCCCC-C--C---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 111111110 0 0 0112467889999999999999999999998763
No 152
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.7e-34 Score=310.22 Aligned_cols=255 Identities=31% Similarity=0.493 Sum_probs=203.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.++||+|+||.||+|++..+ ..||+|+++... ...+.+.+|++++++++||||+++++++. ....+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcE
Confidence 46799999999999999999998755 469999987432 23467899999999999999999998742 34568
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++|+|.+++.... ...+++.++..++.|++.|++|+|+. +++||||||+||+++.++.++|+|||.++
T Consensus 77 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~ 150 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 150 (262)
T ss_pred EEEEcCCCCcHHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCcee
Confidence 9999999999999998643 34678999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
.+...... ......++..|+|||+..+..++.++||||+||++|||++ |+.||...... ..
T Consensus 151 ~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------------~~ 212 (262)
T cd05071 151 LIEDNEYT----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------------EV 212 (262)
T ss_pred eccccccc----cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------------HH
Confidence 65432211 1112346778999999988899999999999999999999 88888653211 11
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
.+.+.... + .+...++...+.+++.+|++.+|++||+++++.+.|+..
T Consensus 213 ~~~~~~~~---~---~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 213 LDQVERGY---R---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHhcCC---C---CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11111110 0 111223456788999999999999999999999998865
No 153
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2e-34 Score=311.79 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=202.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-----cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-----GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
++|++.+.||+|++|.||+|.+..++++||+|.+..... ...+.+.+|++++++++||||+++++++ .++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccC
Confidence 568999999999999999999988899999999864321 2245788999999999999999999985 456
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..++|+||+++++|.+++.. .+.+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+||
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~df 148 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKA-----YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 148 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 688999999999999999986 34688899999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
|.++....... .........|+..|+|||+..+..++.++||||+|+++|||++|+.||......
T Consensus 149 g~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------------- 213 (263)
T cd06625 149 GASKRLQTICS--SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM------------- 213 (263)
T ss_pred ccceecccccc--ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-------------
Confidence 99976532211 111112345788999999999988999999999999999999999998643211
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
........ .. ........+...+.+++.+||..+|.+||++.|++++
T Consensus 214 ~~~~~~~~---~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 214 AAIFKIAT---QP---TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHhc---cC---CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00011110 00 0111122345667889999999999999999999876
No 154
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.2e-34 Score=320.61 Aligned_cols=267 Identities=24% Similarity=0.354 Sum_probs=205.5
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||+|+||.||+|.+..++..||+|.++.... ....++.+|++++++++||||+++++++ .+++..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAF-----YSDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeCCEEE
Confidence 368899999999999999999998999999999874422 2345688999999999999999999985 4567889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.++++.. +.+++..+..++.|+++|++|||+.. +++||||||+||+++.++.+|++|||++.
T Consensus 76 lv~ey~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 148 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 148 (308)
T ss_pred EEeeccCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcc
Confidence 999999999999999863 46889999999999999999999732 89999999999999999999999999987
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC-----
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL----- 936 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~----- 936 (1003)
..... ......|+..|+|||+..+..++.++||||+|+++|||++|+.||....... .........
T Consensus 149 ~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~ 219 (308)
T cd06615 149 QLIDS-------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE--LEAMFGRPVSEGEA 219 (308)
T ss_pred ccccc-------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh--HHHhhcCccccccc
Confidence 54221 1123568899999999888889999999999999999999999986432111 111110000
Q ss_pred ----------------chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 937 ----------------PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 937 ----------------~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+....+..+......+.. .+ .......+.+++.+|++.+|++||+++|++++-.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 220 KESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPK-LP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred cCCcccccCCCCCccchhhHHHHHHHHhcCCCcc-Cc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 001111122111111111 00 0123456889999999999999999999998754
No 155
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.6e-34 Score=337.75 Aligned_cols=271 Identities=21% Similarity=0.261 Sum_probs=196.7
Q ss_pred HHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCC------CceeEeeeeee
Q 001858 698 LNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHR------NLIKIITVCSS 771 (1003)
Q Consensus 698 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~ 771 (1003)
+....++|++.++||+|+||+||+|.+..+++.||||+++... .....+..|++++++++|. +++++++++.
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~- 201 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ- 201 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE-
Confidence 3345688999999999999999999999889999999996332 2234566788887777554 5788888753
Q ss_pred cccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccCCCCceEeCCCC
Q 001858 772 IDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDM 850 (1003)
Q Consensus 772 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~ 850 (1003)
.+....++|||++ +++|.+++.+ .+.+++.++..++.||+.||+|||+ . +|+||||||+|||++.++
T Consensus 202 ---~~~~~~~iv~~~~-g~~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 202 ---NETGHMCIVMPKY-GPCLLDWIMK-----HGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSD 269 (467)
T ss_pred ---cCCceEEEEEecc-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCC
Confidence 2345688999988 6689999876 3568999999999999999999997 5 899999999999998765
Q ss_pred ----------------CeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhC
Q 001858 851 ----------------VAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTG 914 (1003)
Q Consensus 851 ----------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g 914 (1003)
.+||+|||.+.... .......||+.|+|||++.+..++.++||||+||++|||++|
T Consensus 270 ~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~--------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG 341 (467)
T PTZ00284 270 TVVDPVTNRALPPDPCRVRICDLGGCCDER--------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG 341 (467)
T ss_pred cccccccccccCCCCceEEECCCCccccCc--------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC
Confidence 49999999885321 112246799999999999999999999999999999999999
Q ss_pred CCCCCcccCCcch-hhHHHHhhCchhH---------HHHHHhhcccCCCCchhh---------HH--HHHHHHHHHHhhc
Q 001858 915 RRPTHTMFNDGLT-LHGFVKMALPEKV---------MEIVDFALLLDPGNERAK---------IE--ECLTAVVRIGVLC 973 (1003)
Q Consensus 915 ~~P~~~~~~~~~~-~~~~~~~~~~~~~---------~~~i~~~l~~~~~~~~~~---------~~--~~~~~l~~l~~~c 973 (1003)
+.||......+.. ........++..+ .++........+...... .. .....+.+++.+|
T Consensus 342 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 421 (467)
T PTZ00284 342 KLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGL 421 (467)
T ss_pred CCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHh
Confidence 9999764321110 0000001111111 111111111111000000 00 1124577999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 001858 974 SMESPSERIHMADAVKN 990 (1003)
Q Consensus 974 l~~~p~~RPs~~ev~~~ 990 (1003)
++.||++||+++|+++|
T Consensus 422 L~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 422 LHYDRQKRLNARQMTTH 438 (467)
T ss_pred CCcChhhCCCHHHHhcC
Confidence 99999999999999985
No 156
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.8e-34 Score=321.14 Aligned_cols=242 Identities=24% Similarity=0.322 Sum_probs=192.7
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 779 (1003)
+|+..+.||+|+||+||+|.+..+++.||+|+++.. .....+.+..|.++++.+. |++|+++.++ +.+.+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~-----~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSC-----FQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeE-----EecCCE
Confidence 467789999999999999999999999999998743 2334567888999998885 5777788877 345667
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.. .+.+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~ 147 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQ-----VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecccc
Confidence 8999999999999999976 35689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .
T Consensus 148 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------------~ 208 (323)
T cd05615 148 CKEHMVDG-----VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--------------E 208 (323)
T ss_pred ccccCCCC-----ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--------------H
Confidence 97532211 1122356899999999999989999999999999999999999999753211 1
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM 984 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 984 (1003)
..+.+.......| ......+.+++.+|++.+|++|++.
T Consensus 209 ~~~~i~~~~~~~p-------~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 209 LFQSIMEHNVSYP-------KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHHhCCCCCC-------ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1111111111111 1234567889999999999999974
No 157
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.4e-35 Score=330.72 Aligned_cols=206 Identities=25% Similarity=0.349 Sum_probs=175.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|++++..++||+|+++++. +.+++.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~-----~~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYS-----FQDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEE-----EEcCCE
Confidence 36888999999999999999999999999999997432 3345678889999999999999999988 455778
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.+ .+.+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~ 147 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMK-----KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGL 147 (360)
T ss_pred EEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccC
Confidence 8999999999999999976 35689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccc------------------------------cCcccccccccccccCccccCCCCCCccccchhHHHHHH
Q 001858 860 AKFLFDRPIQE------------------------------TSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLL 909 (1003)
Q Consensus 860 a~~~~~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ 909 (1003)
+.......... ........+||+.|+|||++.+..++.++||||+||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvily 227 (360)
T cd05627 148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (360)
T ss_pred CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceee
Confidence 87543211000 000012357999999999999999999999999999999
Q ss_pred HHHhCCCCCCcc
Q 001858 910 EMFTGRRPTHTM 921 (1003)
Q Consensus 910 ell~g~~P~~~~ 921 (1003)
||++|+.||...
T Consensus 228 el~tG~~Pf~~~ 239 (360)
T cd05627 228 EMLIGYPPFCSE 239 (360)
T ss_pred ecccCCCCCCCC
Confidence 999999999753
No 158
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.4e-34 Score=310.65 Aligned_cols=255 Identities=32% Similarity=0.493 Sum_probs=203.9
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.+.||+|+||.||+|.+. +++.||+|.++... ...+.+.+|++++++++|||++++++++ ...+..+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVC-----TLEEPIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEE-----ecCCCee
Confidence 467899999999999999999976 45689999987433 3357789999999999999999999985 4456789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 78 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred eeeecccCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 9999999999999997643 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
........ .......+..|+|||+..+..++.++||||+|+++|||++ |+.||..... ...
T Consensus 152 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------------~~~ 213 (261)
T cd05068 152 VIKEDIYE----AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--------------AEV 213 (261)
T ss_pred EccCCccc----ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--------------HHH
Confidence 76432111 1111223568999999998899999999999999999999 9999865321 111
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
...+...... +....+...+.+++.+|++.+|++||++.++.+.|+.
T Consensus 214 ~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 214 LQQVDQGYRM------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHcCCCC------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1112211111 1112335678899999999999999999999999875
No 159
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.5e-34 Score=316.89 Aligned_cols=270 Identities=20% Similarity=0.257 Sum_probs=210.0
Q ss_pred cHHHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeec
Q 001858 694 SYAELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSI 772 (1003)
Q Consensus 694 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 772 (1003)
.++.+..+.++|++.+.||+|+||.||+|.+..+++.+|+|+++... .....+.+|+.+++++ +|||++++++++...
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34556667889999999999999999999999899999999886432 2236788899999999 699999999987654
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCe
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 852 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~ 852 (1003)
...++...++||||+++++|.+++...... ...+++..++.++.|+++|+.|||+. +++||||||+||+++.++.+
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKR-GERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhcc-CccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 445667889999999999999998753222 45688999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCccccCcccccccccccccCccccCC-----CCCCccccchhHHHHHHHHHhCCCCCCcccCCcch
Q 001858 853 HVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-----GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLT 927 (1003)
Q Consensus 853 kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~ 927 (1003)
|++|||+++...... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||.......
T Consensus 164 kl~dfg~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~-- 236 (286)
T cd06638 164 KLVDFGVSAQLTSTR-----LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR-- 236 (286)
T ss_pred EEccCCceeecccCC-----CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH--
Confidence 999999997653221 11123468999999998753 457889999999999999999999986532110
Q ss_pred hhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 928 LHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
....... ...+ ...........+..++.+||+.+|++||++.|++++.
T Consensus 237 -----------~~~~~~~---~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 237 -----------ALFKIPR---NPPP--TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred -----------HHhhccc---cCCC--cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0000000 0000 0001111234688999999999999999999999874
No 160
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.7e-34 Score=310.69 Aligned_cols=251 Identities=18% Similarity=0.244 Sum_probs=202.6
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccc-cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK-QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
+|++.+.||+|+||.||++.+..+++.||+|.++.. .....+.+.+|+.+++.++|||++++++++ .+++..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 478889999999999999999989999999998643 233457788999999999999999999984 45678899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++++|.+++.... ...+++..++.++.|++.|++|||++ +|+|+||||+||+++.++.++++|||.+..
T Consensus 76 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~ 149 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARL 149 (255)
T ss_pred EEeeCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCccee
Confidence 999999999999987643 34678999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME 942 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1003)
..... .......|++.|+|||+..+..++.++|+||+|+++|+|++|+.||...... ....
T Consensus 150 ~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------------~~~~ 210 (255)
T cd08219 150 LTSPG-----AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK--------------NLIL 210 (255)
T ss_pred ecccc-----cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH--------------HHHH
Confidence 53221 1122356889999999998888999999999999999999999998642210 0111
Q ss_pred HHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 943 IVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 943 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+. .... .+....+...+.+++.+||+.+|++||++.|++..
T Consensus 211 ~~~---~~~~---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 211 KVC---QGSY---KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHh---cCCC---CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 111 1111 01112234567899999999999999999999864
No 161
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.8e-34 Score=315.62 Aligned_cols=252 Identities=24% Similarity=0.310 Sum_probs=199.9
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
|+..+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|+++++.++|++++++.+++ ..++..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEEE
Confidence 667789999999999999999999999999986432 22345678899999999999999998874 4567789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.
T Consensus 77 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~ 150 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMG---NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred EEEEeccCccHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcce
Confidence 9999999999999887533 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... ......|+..|+|||++.+..++.++|+||+||++|||++|+.||...... ...
T Consensus 151 ~~~~~~------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~--------------~~~ 210 (285)
T cd05632 151 KIPEGE------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK--------------VKR 210 (285)
T ss_pred ecCCCC------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------------HHH
Confidence 543211 112346899999999999889999999999999999999999999753211 001
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-----MADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~ 990 (1003)
+.+........ ..........+.+++..|++.+|++||+ +.+++++
T Consensus 211 ~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 211 EEVDRRVLETE---EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HHHHHhhhccc---cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 11111111110 0111223456788999999999999999 7787775
No 162
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-34 Score=317.78 Aligned_cols=252 Identities=22% Similarity=0.286 Sum_probs=204.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|++.+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++|||++++++++. .+...+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCEEE
Confidence 358999999999999999999998889999999998665555678899999999999999999999853 456789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 94 lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 94 VVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred EeecccCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 99999999999999864 3478899999999999999999999 99999999999999999999999999987
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......|++.|+|||...+..++.++|||||||++|+|++|+.||......+. .
T Consensus 165 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-------------~- 225 (296)
T cd06654 165 QITPEQ-----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-------------L- 225 (296)
T ss_pred hccccc-----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-------------H-
Confidence 543221 111234688999999999888899999999999999999999999965322100 0
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
........+ .....+.....+.+++.+||..+|++||++.|++++
T Consensus 226 --~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 226 --YLIATNGTP--ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --HHHhcCCCC--CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 000000100 011112344567889999999999999999999985
No 163
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3e-34 Score=316.70 Aligned_cols=262 Identities=27% Similarity=0.409 Sum_probs=202.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCce--EEEEEeccc-cccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLP--VAVKVINLK-QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 777 (1003)
.++|++.+.||+|+||.||+|.+..++.. +|+|.++.. .....+.+.+|++++.++ +||||+++++++ ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~~~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHR 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----CCC
Confidence 45788999999999999999998776654 577766532 223346788999999999 899999999985 446
Q ss_pred CceEEeeecccCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEe
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQ-----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLL 846 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill 846 (1003)
+..++||||+++++|.+++...... ....+++.+++.++.|++.|++|||+. +++||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 6789999999999999999865321 123688999999999999999999999 99999999999999
Q ss_pred CCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCc
Q 001858 847 DHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDG 925 (1003)
Q Consensus 847 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~ 925 (1003)
+.++.+||+|||++...... .......++..|+|||+..+..++.++||||+||++|||++ |..||......
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~- 230 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVY------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA- 230 (303)
T ss_pred cCCCcEEeCccccCcccchh------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-
Confidence 99999999999998632110 01111234678999999888889999999999999999998 99998643221
Q ss_pred chhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 926 LTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
+..+.+...... .........+.+++.+||+.+|++||+++++++.+..+...
T Consensus 231 -------------~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 231 -------------ELYEKLPQGYRL------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred -------------HHHHHHhcCCcC------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111111111000 01112345678999999999999999999999998876544
No 164
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.3e-34 Score=316.55 Aligned_cols=264 Identities=26% Similarity=0.436 Sum_probs=206.7
Q ss_pred HhccCCccCeeeeccceEEEEEEECCC-----CceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGED-----LLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSID 773 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 773 (1003)
..++|++.+.||+|+||.||+|.+... ...+|+|.+.... ......+.+|+++++++ +||||+++++++
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~---- 85 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC---- 85 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence 456789999999999999999998643 3689999987432 23346788999999999 899999999985
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCC
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSND-----------QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPS 842 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~ 842 (1003)
..++..+++|||+++|+|.++++.... ...+.+++.+++.++.|++.|++|||+. +|+||||||+
T Consensus 86 -~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~ 161 (293)
T cd05053 86 -TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAAR 161 (293)
T ss_pred -cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ccccccccee
Confidence 445678999999999999999976421 2245789999999999999999999999 9999999999
Q ss_pred ceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcc
Q 001858 843 NVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTM 921 (1003)
Q Consensus 843 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~ 921 (1003)
||+++.++.+|++|||.++.+....... ......++..|+|||+..+..++.++|||||||++|||++ |..||...
T Consensus 162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 238 (293)
T cd05053 162 NVLVTEDHVMKIADFGLARDIHHIDYYR---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 238 (293)
T ss_pred eEEEcCCCeEEeCcccccccccccccee---ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence 9999999999999999998664322111 1111235678999999988899999999999999999998 99998653
Q ss_pred cCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 922 FNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
... +..+.+...... .....+...+.+++.+||+++|++|||+.|+++.|+++.
T Consensus 239 ~~~--------------~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 239 PVE--------------ELFKLLKEGYRM------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CHH--------------HHHHHHHcCCcC------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 211 111111111111 111123457889999999999999999999999998764
No 165
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-34 Score=316.45 Aligned_cols=260 Identities=26% Similarity=0.458 Sum_probs=202.2
Q ss_pred ccCCccCeeeeccceEEEEEEEC----CCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLG----EDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.+|++.+.||+|+||.||+|.+. .+++.||+|.+.... ......+.+|++++++++||||+++++++ ..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVV-----TQE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEE-----ecC
Confidence 46788899999999999999852 355789999987433 23346789999999999999999999984 445
Q ss_pred CceEEeeecccCCCHHHHHhhcCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceE
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQ------------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVL 845 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nil 845 (1003)
...++||||+++++|.+++...... ....+++.++..++.|++.|++|||++ +++||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 6789999999999999999643210 023578899999999999999999999 9999999999999
Q ss_pred eCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 001858 846 LDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFND 924 (1003)
Q Consensus 846 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~ 924 (1003)
++.++.+|++|||+++........ .......++..|+|||++.+..++.++||||+||++|||++ |..||.....
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~- 232 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYY---RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN- 232 (283)
T ss_pred EcCCCcEEeccccccccccCCcce---ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 999999999999999765432211 11122345778999999988889999999999999999998 9889864321
Q ss_pred cchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 925 GLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
..+.+.+...... +..+.+...+.+++.+||+.+|++||++.++.++|.+
T Consensus 233 -------------~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 -------------QEVIEMVRKRQLL------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -------------HHHHHHHHcCCcC------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1112222211111 1112234568889999999999999999999998864
No 166
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.2e-34 Score=314.06 Aligned_cols=255 Identities=20% Similarity=0.303 Sum_probs=202.0
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++ ...+..+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~-----~~~~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSY-----LRRDKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEE-----EeCCEEE
Confidence 35788889999999999999999989999999998765555556788999999999999999999984 4467789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++.. .+.+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 83 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 83 ICMEFCGGGSLQDIYHV-----TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEEeccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeee
Confidence 99999999999999976 35689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccC---CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGM---GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
...... .......|+..|+|||++. ...++.++||||+||++|+|++|+.||........
T Consensus 155 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~------------ 217 (267)
T cd06645 155 QITATI-----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------------ 217 (267)
T ss_pred EccCcc-----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh------------
Confidence 653221 1122356899999999874 45688899999999999999999999864322110
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
......... .+.. ......+...+.+++.+|++.+|++||++++++++
T Consensus 218 -~~~~~~~~~--~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 218 -LFLMTKSNF--QPPK-LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred -HHhhhccCC--CCCc-ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 000000000 0000 00001123467889999999999999999999864
No 167
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.6e-34 Score=324.48 Aligned_cols=266 Identities=23% Similarity=0.394 Sum_probs=204.1
Q ss_pred hccCCccCeeeeccceEEEEEEEC-----CCCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeeccc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLG-----EDLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 774 (1003)
.++|++.+.||+|+||+||+|.+. .+++.||||+++... ......+.+|+.++.++ +||||+++++++.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~---- 81 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT---- 81 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee----
Confidence 467999999999999999999853 356789999997433 22346788999999999 6899999999863
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCC----------------------------------------------------
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQ---------------------------------------------------- 802 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 802 (1003)
..+...++||||+++|+|.+++......
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 2345678999999999999999753210
Q ss_pred ----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccC
Q 001858 803 ----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETS 872 (1003)
Q Consensus 803 ----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 872 (1003)
....+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--- 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch---
Confidence 012468888999999999999999999 9999999999999999999999999999765322111
Q ss_pred cccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccC
Q 001858 873 SSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLD 951 (1003)
Q Consensus 873 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 951 (1003)
.......++..|+|||+..+..++.++||||+|+++|||++ |..||...... +.....+.......
T Consensus 236 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------------~~~~~~~~~~~~~~ 302 (343)
T cd05103 236 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------------EEFCRRLKEGTRMR 302 (343)
T ss_pred hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-------------HHHHHHHhccCCCC
Confidence 11112345678999999988899999999999999999997 99998653221 11111111111110
Q ss_pred CCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 952 PGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 952 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
........+.+++.+||+.+|++||++.|++++|+.+.+
T Consensus 303 ------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 303 ------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 001123468899999999999999999999999998765
No 168
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.4e-34 Score=327.02 Aligned_cols=274 Identities=22% Similarity=0.243 Sum_probs=202.3
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.++||+|+||.||+|.+..+++.||+|++... .....+++.+|+++++.++||||+++++++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999889999999998643 223456788999999999999999999986543322223689
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+. ++|.+++.. ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~l~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS-----PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEeeccc-cCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecccccee
Confidence 9999997 488888865 35689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh---hCc
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM---ALP 937 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~---~~~ 937 (1003)
...... ........+++.|+|||++.+. .++.++||||+||++|||++|+.||......+ ........ ...
T Consensus 152 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~ 226 (372)
T cd07853 152 VEEPDE----SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSL 226 (372)
T ss_pred ecccCc----cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCH
Confidence 653221 1112234578999999998774 47899999999999999999999997643221 11111100 000
Q ss_pred hhHHH---HHHhhcccCCCCchh------hHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 938 EKVME---IVDFALLLDPGNERA------KIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 938 ~~~~~---~i~~~l~~~~~~~~~------~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
+.+.. .....+...+..... ...+....+.+++.+|++.+|++||++.|++++-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 227 EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 11110 011111111111000 0112245678999999999999999999999863
No 169
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.7e-34 Score=310.01 Aligned_cols=249 Identities=30% Similarity=0.430 Sum_probs=197.0
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
+.||+|+||.||+|++..+++.||+|...... ......+.+|++++++++||||+++++++ ......++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCCCCeEEEEeec
Confidence 46999999999999998899999999876432 23346799999999999999999999985 3456789999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||++....+..
T Consensus 76 ~~~~L~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 148 (252)
T cd05084 76 QGGDFLTFLRTE----GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGV 148 (252)
T ss_pred cCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccc
Confidence 999999999753 34588999999999999999999999 99999999999999999999999999997543221
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHHHh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDF 946 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 946 (1003)
.. .......++..|+|||.+.++.++.++||||+|+++|||++ |..||..... ......+..
T Consensus 149 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--------------~~~~~~~~~ 211 (252)
T cd05084 149 YA---STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--------------QQTREAIEQ 211 (252)
T ss_pred cc---ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--------------HHHHHHHHc
Confidence 11 11111224567999999998899999999999999999998 8888864321 111222221
Q ss_pred hcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 947 ALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 947 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
.... .....++..+.+++.+|++.+|++||++.|+.+.|.
T Consensus 212 ~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 212 GVRL------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCCC------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1111 111233557889999999999999999999998875
No 170
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.2e-34 Score=313.84 Aligned_cols=261 Identities=27% Similarity=0.419 Sum_probs=203.6
Q ss_pred HhccCCccCeeeeccceEEEEEEECC-----CCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 774 (1003)
..++|.+.+.||+|+||.||+|.+.. ++..||+|...... ......|.+|+.++++++|+||+++++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~----- 78 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVS----- 78 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----
Confidence 35679999999999999999999976 67789999886443 23346789999999999999999999985
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC--
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQ--VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-- 850 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-- 850 (1003)
.+....++||||+++++|.+++...+.. ....+++.++.+++.||+.|++|||+. +++||||||+||+++.++
T Consensus 79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCC
Confidence 3355678999999999999999875422 123689999999999999999999999 999999999999998754
Q ss_pred -CeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchh
Q 001858 851 -VAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTL 928 (1003)
Q Consensus 851 -~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~ 928 (1003)
.+|++|||+++......... .......+..|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---- 228 (277)
T cd05036 156 RVAKIADFGMARDIYRASYYR---KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---- 228 (277)
T ss_pred cceEeccCccccccCCcccee---cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 59999999998663322111 1112234568999999998999999999999999999997 99998753221
Q ss_pred hHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 929 HGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
...+.+....... ....++..+.+++.+|++.+|++||++.+++++|.
T Consensus 229 ----------~~~~~~~~~~~~~------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 ----------EVMEFVTGGGRLD------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ----------HHHHHHHcCCcCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111121111111 11223457889999999999999999999999985
No 171
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1e-34 Score=328.20 Aligned_cols=272 Identities=21% Similarity=0.211 Sum_probs=202.4
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecc-cCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSID-FKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 777 (1003)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.... ....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999998889999999987432 233567889999999999999999999864322 1233
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++ ++.+.+.. .+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 457999999976 77777653 478889999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh---
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM--- 934 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~--- 934 (1003)
|+++...... ......||..|+|||++.+..++.++||||+||++|||++|+.||......+. .......
T Consensus 164 g~~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 236 (355)
T cd07874 164 GLARTAGTSF------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGT 236 (355)
T ss_pred cccccCCCcc------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCC
Confidence 9997543221 12235689999999999998999999999999999999999999975422111 1110000
Q ss_pred h-------CchhHHHHHHhhcccC----C----C----CchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 935 A-------LPEKVMEIVDFALLLD----P----G----NERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 935 ~-------~~~~~~~~i~~~l~~~----~----~----~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
. ..+.....++...... + . ............+.+++.+|++.+|++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred CCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0 0011111111100000 0 0 0000011123567899999999999999999999987
No 172
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.9e-34 Score=312.26 Aligned_cols=261 Identities=24% Similarity=0.389 Sum_probs=206.0
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCc----eEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLL----PVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
..+|++.++||+|+||+||+|++..++. .||+|+++.... ...+.+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~------ 79 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICL------ 79 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEc------
Confidence 4578899999999999999999876665 489999864432 33567889999999999999999999863
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
....++++||+++|+|.+++... .+.+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 ~~~~~l~~~~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~d 152 (279)
T cd05109 80 TSTVQLVTQLMPYGCLLDYVREN----KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITD 152 (279)
T ss_pred CCCcEEEEEcCCCCCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECC
Confidence 23457999999999999999764 34689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhh
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
||+++........ .......++..|+|||...+..++.++|||||||++|||++ |..||.....
T Consensus 153 fG~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~------------ 217 (279)
T cd05109 153 FGLARLLDIDETE---YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA------------ 217 (279)
T ss_pred CCceeecccccce---eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH------------
Confidence 9999866322111 11112235678999999988899999999999999999998 8999865321
Q ss_pred CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhh
Q 001858 936 LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKY 998 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~ 998 (1003)
......+...... + ....+...+.+++.+||+.+|++||++.|+++.++.+.+..
T Consensus 218 --~~~~~~~~~~~~~-~-----~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 218 --REIPDLLEKGERL-P-----QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred --HHHHHHHHCCCcC-C-----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 1112222221111 1 11123556889999999999999999999999998887665
No 173
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.1e-34 Score=319.23 Aligned_cols=270 Identities=20% Similarity=0.298 Sum_probs=201.3
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||+|+||.||+|++..+++.||+|.++... ......+.+|++++++++||||+++++++ ..++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV-----HTDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEE-----eeCCeEE
Confidence 57899999999999999999999899999999987443 23345678999999999999999999985 3466789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++ +|.+++... ...+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 81 lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 152 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLAR 152 (309)
T ss_pred EEEeCCCC-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccce
Confidence 99999986 888888764 34578999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh---hCc
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM---ALP 937 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~---~~~ 937 (1003)
...... .......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+. ....... ..+
T Consensus 153 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~ 226 (309)
T cd07872 153 AKSVPT-----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTE 226 (309)
T ss_pred ecCCCc-----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCH
Confidence 542211 11122457899999998765 4678999999999999999999999976432211 1111100 000
Q ss_pred hhHHHHHHh---hcccCCC----CchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 938 EKVMEIVDF---ALLLDPG----NERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 938 ~~~~~~i~~---~l~~~~~----~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
+.+...... .....+. ............+.+++.+|++.+|.+|||++|++++-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 287 (309)
T cd07872 227 ETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287 (309)
T ss_pred HHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence 101000000 0000010 00111123445678999999999999999999999853
No 174
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.1e-34 Score=308.33 Aligned_cols=255 Identities=23% Similarity=0.330 Sum_probs=205.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
++|++.+.||+|+||.||+|.+..+++.+|+|++........+.+.+|++++++++|||++++++++ ......++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEEE
Confidence 5789999999999999999999888899999999866555678899999999999999999999984 45667899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
+|||+++++|.+++... ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||.+..
T Consensus 78 ~~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 150 (262)
T cd06613 78 VMEYCGGGSLQDIYQVT----RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQ 150 (262)
T ss_pred EEeCCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchh
Confidence 99999999999998764 24688999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCC---CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGG---NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
..... .......++..|+|||...+. .++.++||||+||++|||++|+.||....... .
T Consensus 151 ~~~~~-----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-------------~ 212 (262)
T cd06613 151 LTATI-----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR-------------A 212 (262)
T ss_pred hhhhh-----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-------------H
Confidence 53211 111234688899999998776 78899999999999999999999986532110 0
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
... +... ...+ ............+.+++.+||+.+|++||++++++.+
T Consensus 213 ~~~-~~~~-~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 213 LFL-ISKS-NFPP-PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHH-HHhc-cCCC-ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 1100 0011 1111122345678899999999999999999999864
No 175
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.3e-34 Score=307.62 Aligned_cols=251 Identities=31% Similarity=0.488 Sum_probs=198.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
.+|++.+.||+|+||.||+|.+. ++..+|+|++... ......+.+|+++++.++||||+++++++ ...+..++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVC-----TKQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEE-----cCCCceEE
Confidence 45888999999999999999886 4568999998633 22346788999999999999999999984 44567899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++++|.+++.... +.+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.
T Consensus 77 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~ 149 (256)
T cd05059 77 VTEYMANGCLLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARY 149 (256)
T ss_pred EEecCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCccccee
Confidence 999999999999997642 3689999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
..+..... .....++..|+|||...+..++.++||||+|+++|||++ |+.||...... +..
T Consensus 150 ~~~~~~~~----~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------------~~~ 211 (256)
T cd05059 150 VLDDQYTS----SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--------------EVV 211 (256)
T ss_pred cccccccc----cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--------------HHH
Confidence 53322111 111224568999999998899999999999999999999 89998653211 111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
+.+..... + ... ..++.++.+++.+||..+|++||++.|+++.|
T Consensus 212 ~~~~~~~~--~-~~~---~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 212 ESVSAGYR--L-YRP---KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHcCCc--C-CCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11111110 0 001 12356789999999999999999999999876
No 176
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.2e-34 Score=323.10 Aligned_cols=238 Identities=29% Similarity=0.320 Sum_probs=188.1
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHH-HHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECE-ALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++ ..++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 46999999999999999999999999986432 223345556655 46778999999999884 4567889999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++.++..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~ 147 (325)
T cd05604 76 DFVNGGELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (325)
T ss_pred cCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCC
Confidence 99999999999876 45789999999999999999999999 99999999999999999999999999987432
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... +......
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-------------~~~~~~~ 209 (325)
T cd05604 148 AQ-----SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-------------EMYDNIL 209 (325)
T ss_pred CC-----CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-------------HHHHHHH
Confidence 11 11223456999999999999999999999999999999999999999653211 0011111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMA 985 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ 985 (1003)
.......+ .....+.+++.+|+..+|++||++.
T Consensus 210 ~~~~~~~~--------~~~~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 210 HKPLVLRP--------GASLTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred cCCccCCC--------CCCHHHHHHHHHHhccCHHhcCCCC
Confidence 11111111 1234567889999999999999875
No 177
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.9e-35 Score=315.89 Aligned_cols=254 Identities=28% Similarity=0.453 Sum_probs=200.1
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEeccccccc--hHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS--IKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
|++.+.||+|+||+||+|++..+++.||+|++....... .....+|+.++++++||||+++++++. .....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQ-----DDNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEE-----ESSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccc-----ccccccc
Confidence 678899999999999999999999999999998554332 223456999999999999999999953 4777899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++++|.+++.. .+.+++.+++.++.|+++|++|||+. +|+|+||||+||+++.++.++|+|||.+..
T Consensus 76 v~~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQK-----NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVK 147 (260)
T ss_dssp EEEEETTEBHHHHHHH-----HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred cccccccccccccccc-----cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 9999999999999984 45789999999999999999999999 999999999999999999999999999975
Q ss_pred cccCCccccCcccccccccccccCccccC-CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGM-GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
... .........++..|+|||+.. +..++.++||||+|+++|+|++|+.||...... .... ...
T Consensus 148 ~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~--------~~~ 212 (260)
T PF00069_consen 148 LSE-----NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLE--------IIE 212 (260)
T ss_dssp STS-----TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHH--------HHH
T ss_pred ccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhh--------hhh
Confidence 411 112223456899999999988 788999999999999999999999998764110 0000 001
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
........... .........+.+++.+|++.+|++||++.+++++
T Consensus 213 ~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 213 KILKRPLPSSS----QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHTHHHHHT----TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred hcccccccccc----cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11110000000 0000112678999999999999999999999864
No 178
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.1e-34 Score=316.52 Aligned_cols=269 Identities=21% Similarity=0.268 Sum_probs=209.1
Q ss_pred cHHHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeec
Q 001858 694 SYAELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSI 772 (1003)
Q Consensus 694 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 772 (1003)
...++..+.++|++.+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 34555567889999999999999999999999899999999986432 2346778899999999 899999999998654
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCe
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 852 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~ 852 (1003)
+....+..++|+||+++++|.++++..... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLIC-GQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 444456789999999999999998753221 45689999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCccccCcccccccccccccCccccCCC-----CCCccccchhHHHHHHHHHhCCCCCCcccCCcch
Q 001858 853 HVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-----NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLT 927 (1003)
Q Consensus 853 kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~ 927 (1003)
|++|||++........ ......|+..|+|||.+... .++.++||||+||++|||++|+.||......
T Consensus 168 kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~--- 239 (291)
T cd06639 168 KLVDFGVSAQLTSTRL-----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV--- 239 (291)
T ss_pred EEeecccchhcccccc-----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH---
Confidence 9999999976532211 11234588999999987543 3678999999999999999999998754211
Q ss_pred hhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 928 LHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
....+... .+.......+.....+.+++.+||+.+|++||++.|++++
T Consensus 240 ----------~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 240 ----------KTLFKIPR-----NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ----------HHHHHHhc-----CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00111100 0001111112334568899999999999999999999875
No 179
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.4e-34 Score=316.63 Aligned_cols=267 Identities=20% Similarity=0.352 Sum_probs=201.4
Q ss_pred hccCCccCeeeeccceEEEEEEECC----------------CCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCcee
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE----------------DLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIK 764 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 764 (1003)
.++|++.++||+|+||.||+|.+.. +...||+|+++... .....++.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 3579999999999999999986432 34569999987443 233568999999999999999999
Q ss_pred EeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecc
Q 001858 765 IITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQV------DGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGD 838 (1003)
Q Consensus 765 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 838 (1003)
+++++ ...+..++||||+++++|.+++....... ...+++.+++.++.|++.|++|||+. +++|||
T Consensus 84 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~d 155 (296)
T cd05095 84 LLAVC-----ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRD 155 (296)
T ss_pred EEEEE-----ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceeccc
Confidence 99985 34566799999999999999998754221 23578889999999999999999999 999999
Q ss_pred CCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh--CCC
Q 001858 839 LKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT--GRR 916 (1003)
Q Consensus 839 ikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~--g~~ 916 (1003)
|||+||+++.++.++++|||+++.+...... .......++..|+|||...++.++.++||||+||++|||++ |..
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~ 232 (296)
T cd05095 156 LATRNCLVGKNYTIKIADFGMSRNLYSGDYY---RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQ 232 (296)
T ss_pred CChheEEEcCCCCEEeccCcccccccCCcce---eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999765332211 11112335678999999888889999999999999999998 778
Q ss_pred CCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 917 PTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 917 P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
||......+. +. ............. ..+....+...+.+++.+||+.+|++||++.||.+.|+
T Consensus 233 p~~~~~~~~~-----~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 233 PYSQLSDEQV-----IE-----NTGEFFRDQGRQV---YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CccccChHHH-----HH-----HHHHHHhhccccc---cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 8764322110 00 0111111000000 00111123467889999999999999999999999875
No 180
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.4e-34 Score=320.75 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=195.0
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.++.++ +||+|+++++++ .+....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 23456788999999888 699999999984 4567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 76 EYVNGGDLMFHMQR-----QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL 147 (327)
T ss_pred eCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceecc
Confidence 99999999999876 34689999999999999999999999 99999999999999999999999999997432
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||.......... ..+.....+
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-------~~~~~~~~~ 215 (327)
T cd05617 148 GP-----GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-------TEDYLFQVI 215 (327)
T ss_pred CC-----CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-------cHHHHHHHH
Confidence 11 111223569999999999999999999999999999999999999996533211100 001111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM------ADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~------~ev~~~ 990 (1003)
.......| ......+.+++.+|++.+|++|+++ .++.+|
T Consensus 216 ~~~~~~~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 216 LEKPIRIP-------RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HhCCCCCC-------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 11111111 1223557789999999999999984 566554
No 181
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.8e-34 Score=321.65 Aligned_cols=241 Identities=29% Similarity=0.333 Sum_probs=188.6
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHH-HHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECE-ALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 47999999999999999899999999987432 222334444544 56778999999999884 4567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+.+.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~ 147 (325)
T cd05602 76 DYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 147 (325)
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccc
Confidence 99999999999976 34678889999999999999999999 99999999999999999999999999997532
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... +......
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------~~~~~i~ 209 (325)
T cd05602 148 EH-----NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-------------EMYDNIL 209 (325)
T ss_pred cC-----CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-------------HHHHHHH
Confidence 21 11223456999999999999999999999999999999999999999753211 0011111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAV 988 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~ 988 (1003)
....... ......+.+++.+|++.+|.+||++.+.+
T Consensus 210 ~~~~~~~--------~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 210 NKPLQLK--------PNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred hCCcCCC--------CCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 1111111 12345678889999999999999877433
No 182
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.8e-34 Score=314.19 Aligned_cols=262 Identities=25% Similarity=0.432 Sum_probs=204.9
Q ss_pred cCCccCeeeeccceEEEEEEECC-----CCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
+|++.+.||+|+||.||+|+... ....+|+|.+..... ...+++.+|+.+++.++||||+++++.+. .+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 47888999999999999998743 235688998864432 23567899999999999999999999853 45
Q ss_pred CceEEeeecccCCCHHHHHhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQ-------------------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGD 838 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 838 (1003)
+..++|+||+.+++|.+++...... ....+++.+++.++.|++.|++|||+. +++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 6679999999999999998764211 124588999999999999999999999 999999
Q ss_pred CCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCC
Q 001858 839 LKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRP 917 (1003)
Q Consensus 839 ikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P 917 (1003)
|||+||++++++.+||+|||+++........ .......++..|+|||+..+..++.++||||||+++|||++ |+.|
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p 229 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSY---VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 229 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccch---hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999765332211 11122345778999999888889999999999999999998 9999
Q ss_pred CCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 918 THTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
|.... ++++.+.+........ ...+...+.+++.+|++.+|++||+++|+++.|+++..
T Consensus 230 ~~~~~--------------~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 230 YPGIA--------------PERLFNLLKTGYRMER------PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCC--------------HHHHHHHHhCCCCCCC------CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 86532 1222233332221111 12234578899999999999999999999999988754
No 183
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.1e-34 Score=320.80 Aligned_cols=238 Identities=29% Similarity=0.304 Sum_probs=186.7
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHH-HHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECE-ALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
++||+|+||.||+|++..+++.||+|++.... ......+.+|.. +++.++||||+++++++ .+.+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 47999999999999999999999999986432 222345555654 57888999999999884 4567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. ...+++.++..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 147 (321)
T cd05603 76 DYVNGGELFFHLQR-----ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGV 147 (321)
T ss_pred cCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCC
Confidence 99999999998876 35688999999999999999999999 99999999999999999999999999987532
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....
T Consensus 148 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------------~~~~ 205 (321)
T cd05603 148 EP-----EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----------------SQMY 205 (321)
T ss_pred CC-----CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----------------HHHH
Confidence 21 1122335689999999999988999999999999999999999999965321 0111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMA 985 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ 985 (1003)
+..... +... .......+.+++.+|++.+|++||++.
T Consensus 206 ~~i~~~-~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 206 DNILHK-PLQL---PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHhcC-CCCC---CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 111111 1000 011234677889999999999999764
No 184
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.4e-34 Score=310.80 Aligned_cols=259 Identities=27% Similarity=0.457 Sum_probs=204.2
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCc---eEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLL---PVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.++|+..+.||+|+||.||+|+...++. .+|+|.++... ....+.+.+|++++++++|||++++.+++ .+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVV-----TKF 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----ccC
Confidence 4578888999999999999999865543 79999987442 33456789999999999999999999985 445
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..++||||+++++|.+++... .+.+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDH----DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCC
Confidence 6789999999999999999763 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|++.......... ........+..|+|||++.+..++.++||||+||++|||++ |+.||.....
T Consensus 152 g~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~------------- 216 (268)
T cd05063 152 GLSRVLEDDPEGT--YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN------------- 216 (268)
T ss_pred ccceecccccccc--eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-------------
Confidence 9997654321111 11111223567999999988889999999999999999998 9999864321
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
......+.... . .+....+...+.+++.+||+.+|++||++.++++.|+++
T Consensus 217 -~~~~~~i~~~~-~-----~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 217 -HEVMKAINDGF-R-----LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -HHHHHHHhcCC-C-----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11112222111 1 111223456788999999999999999999999999765
No 185
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.9e-34 Score=313.80 Aligned_cols=252 Identities=22% Similarity=0.328 Sum_probs=200.5
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEe
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
.|++.+.||+|+||.||+|.+..++..+|+|.+........+.+.+|+++++.++|||++++++++. .+...++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEEE
Confidence 3678899999999999999999889999999987555555678999999999999999999999853 45678999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
+||+++++|.+++... ...+++..+..++.|+++|++|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 81 ~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 81 IEFCAGGAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 9999999999988653 34689999999999999999999999 9999999999999999999999999999754
Q ss_pred ccCCccccCcccccccccccccCccccC-----CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGM-----GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
.... .......++..|+|||++. +..++.++||||+||++|||++|+.||......+
T Consensus 154 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------------- 215 (282)
T cd06643 154 TRTI-----QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR------------- 215 (282)
T ss_pred cccc-----cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-------------
Confidence 3211 1122356899999999874 3457789999999999999999999986532110
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
....... ...+ .......+...+.+++.+||+.+|++||++++++++
T Consensus 216 ~~~~~~~---~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 216 VLLKIAK---SEPP--TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HHHHHhh---cCCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011100 0001 001111234578899999999999999999999875
No 186
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.8e-34 Score=323.13 Aligned_cols=271 Identities=21% Similarity=0.261 Sum_probs=200.7
Q ss_pred HHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc-CC
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF-KG 776 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 776 (1003)
...++|++.+.||+|+||+||+|.+..+++.||||++.... ....+.+.+|+++++.++||||+++++++..... ..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34678999999999999999999999899999999986432 2234567889999999999999999988643221 22
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
....++++|++ +++|.++++. ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcC
Confidence 34568999988 6799888763 3589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
||+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ .........
T Consensus 162 fg~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~ 232 (343)
T cd07878 162 FGLARQADDE--------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVV 232 (343)
T ss_pred CccceecCCC--------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHh
Confidence 9999764321 123568999999999876 568899999999999999999999996532211 111111000
Q ss_pred --Cchh---------HHHHHHhhcccCCCCc-hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 --LPEK---------VMEIVDFALLLDPGNE-RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 --~~~~---------~~~~i~~~l~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+.. ...... .+...+... ..........+.+++.+|++.+|++|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 233 GTPSPEVLKKISSEHARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCCCHHHHHhcchhhHHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 011111 010011000 00011123456789999999999999999999976
No 187
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.1e-34 Score=321.26 Aligned_cols=199 Identities=27% Similarity=0.378 Sum_probs=173.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcC-C-----CCceeEeeeeeecccC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIR-H-----RNLIKIITVCSSIDFK 775 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~ 775 (1003)
..+|++.+.||+|+||.|.+|.+.++++.||||+++.. .....+...|+.++..++ | -|+|+++++ |.
T Consensus 185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~-----F~ 258 (586)
T KOG0667|consen 185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY-----FY 258 (586)
T ss_pred EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec-----cc
Confidence 34899999999999999999999999999999999843 344566778999999996 4 489999998 67
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC--CeE
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--VAH 853 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~--~~k 853 (1003)
..++.|+|+|.++. +|+++++.+. ...++...++.++.||+.||.+||+. +|||+|+||+|||+.+-+ .+|
T Consensus 259 fr~HlciVfELL~~-NLYellK~n~---f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vK 331 (586)
T KOG0667|consen 259 FRNHLCIVFELLST-NLYELLKNNK---FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIK 331 (586)
T ss_pred cccceeeeehhhhh-hHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCcee
Confidence 78999999999976 9999999876 44699999999999999999999999 999999999999997544 799
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcc
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
|+|||.|++.....+ ..+-+..|.|||++.|.+|+.+.||||||||++||++|.+-|.+.
T Consensus 332 VIDFGSSc~~~q~vy--------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 332 VIDFGSSCFESQRVY--------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred EEecccccccCCcce--------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 999999987644332 244577899999999999999999999999999999998877664
No 188
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.6e-34 Score=307.46 Aligned_cols=249 Identities=33% Similarity=0.432 Sum_probs=200.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
.+|++.+.||+|+||.||+|... +..||+|..+.. ...+.+.+|+.++++++|+|++++++++ +..+...++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~----~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI----VEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEE----EcCCCceEE
Confidence 57889999999999999999875 668999998633 3356899999999999999999999875 334566799
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
|+||+++++|.++++... ...+++..++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||++..
T Consensus 78 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred EEECCCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCcccee
Confidence 999999999999998643 33588999999999999999999999 999999999999999999999999999975
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
..... ....++..|+|||+..+..++.++||||+||++|||++ |+.||..... ....
T Consensus 152 ~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--------------~~~~ 209 (256)
T cd05082 152 ASSTQ--------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------------KDVV 209 (256)
T ss_pred ccccC--------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--------------HHHH
Confidence 43211 12335678999999988899999999999999999998 9999864311 1111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
..+...... .....++..+.+++.+|++.+|++||+++++++.|+.
T Consensus 210 ~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 210 PRVEKGYKM------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred HHHhcCCCC------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 111111111 1112345678899999999999999999999998875
No 189
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5.6e-34 Score=306.96 Aligned_cols=249 Identities=25% Similarity=0.374 Sum_probs=196.7
Q ss_pred eeeeccceEEEEEEE--CCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 710 LIGQGSFGFVYRGNL--GEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 710 ~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
.||+|+||.||+|.+ ..++..||+|+++.... ...+.+.+|+.+++.++||||+++++++. .+..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 689999999999975 45678899999864432 23567899999999999999999999852 345689999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
|+++++|.+++.. ...+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+|++|||++.....
T Consensus 76 ~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~ 147 (257)
T cd05116 76 LAELGPLNKFLQK-----NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGA 147 (257)
T ss_pred cCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCC
Confidence 9999999999976 34688999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
..... .......++..|+|||.+....++.++|||||||++|||++ |+.||...... ...+.+
T Consensus 148 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------------~~~~~i 211 (257)
T cd05116 148 DENYY--KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------------EVTQMI 211 (257)
T ss_pred CCCee--eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHH
Confidence 22110 11112234678999999888889999999999999999998 99998753211 112222
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
....... ....++..+.+++.+||+++|++||++++|++.|+..
T Consensus 212 ~~~~~~~------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 212 ESGERME------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HCCCCCC------CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 2221111 1123456788999999999999999999999999764
No 190
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.5e-34 Score=312.67 Aligned_cols=260 Identities=25% Similarity=0.450 Sum_probs=203.6
Q ss_pred hccCCccCeeeeccceEEEEEEEC-----CCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLG-----EDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
..+|++.++||+|+||.||+|... .++..+|+|.+........+.+.+|++++++++||||+++++++ .+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~ 78 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC-----TE 78 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE-----ec
Confidence 356788899999999999999752 34668999998765555567899999999999999999999985 34
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEe
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQ----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLL 846 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill 846 (1003)
.+..+++|||+++++|.+++...... ....+++.+++.++.|++.|++|||+. +++||||||+||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~ 155 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLV 155 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEE
Confidence 56679999999999999999875321 113588999999999999999999999 99999999999999
Q ss_pred CCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCc
Q 001858 847 DHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDG 925 (1003)
Q Consensus 847 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~ 925 (1003)
++++.+||+|||+++........ .......+++.|+|||+..+..++.++|||||||++|||++ |+.||......
T Consensus 156 ~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 231 (280)
T cd05092 156 GQGLVVKIGDFGMSRDIYSTDYY---RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT- 231 (280)
T ss_pred cCCCCEEECCCCceeEcCCCcee---ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH-
Confidence 99999999999999755322111 11122345788999999998999999999999999999998 89998643211
Q ss_pred chhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 926 LTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+....+... .+.. ....++..+.+++.+||+.+|++||+++|+.+.|+
T Consensus 232 -------------~~~~~~~~~---~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 232 -------------EAIECITQG---RELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -------------HHHHHHHcC---ccCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111111 1100 11123456889999999999999999999999876
No 191
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.1e-34 Score=306.34 Aligned_cols=254 Identities=30% Similarity=0.506 Sum_probs=201.5
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.++||+|+||.||+|.+. .+..||+|.++.... ..+.+.+|+.++++++||+++++++++. ....+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIY 76 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcE
Confidence 357899999999999999999876 556799999874333 3467999999999999999999998742 34468
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
++|||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++||||||+||++++++.++++|||.+.
T Consensus 77 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeee
Confidence 9999999999999997643 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
.+...... ......++..|+|||+..+..++.++||||||+++|||++ |+.||...... +.
T Consensus 151 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------------~~ 212 (260)
T cd05070 151 LIEDNEYT----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--------------EV 212 (260)
T ss_pred eccCcccc----cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--------------HH
Confidence 65332211 1112335678999999988889999999999999999999 88998653211 11
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+.+.... + .+........+.+++.+|+.++|++||+++++.+.|+.
T Consensus 213 ~~~~~~~~---~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 213 LEQVERGY---R---MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHcCC---C---CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11111111 1 11112335678899999999999999999999988864
No 192
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.2e-34 Score=311.48 Aligned_cols=267 Identities=24% Similarity=0.379 Sum_probs=210.2
Q ss_pred HhccCCccCeeeeccceEEEEEEECC----CCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGE----DLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 775 (1003)
..++|++.+.||+|+||.||+|.+.. .+..||+|++.... ....+.+.+|+.++++++|||++++++++. .
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~----~ 79 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCI----E 79 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----c
Confidence 35689999999999999999999875 35789999886432 233567889999999999999999999863 3
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCe
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQ---VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 852 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~ 852 (1003)
++...++++||+++++|.+++...... ....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcE
Confidence 356779999999999999999875432 125689999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHH
Q 001858 853 HVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 853 kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~ 931 (1003)
|++|||+++.+.+...... .....++..|+|||++.+..++.++||||+||++||+++ |+.||.....
T Consensus 157 kl~d~g~~~~~~~~~~~~~---~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------- 225 (280)
T cd05043 157 KITDNALSRDLFPMDYHCL---GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-------- 225 (280)
T ss_pred EECCCCCcccccCCceEEe---CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--------
Confidence 9999999986543321111 112345778999999988889999999999999999999 9999865321
Q ss_pred HHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 932 VKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
.++...+..... + .....++..+.+++.+||+.+|++||++.|+++.|+.+.++
T Consensus 226 ------~~~~~~~~~~~~--~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 226 ------FEMAAYLKDGYR--L----AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred ------HHHHHHHHcCCC--C----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 111111111111 0 01112345688999999999999999999999999988764
No 193
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.3e-34 Score=309.88 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=201.6
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc---------chHHHHHHHHHHHhcCCCCceeEeeeeeeccc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG---------SIKSFVAECEALKNIRHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 774 (1003)
+|.+.+.||+|++|.||+|.+..+++.||+|.+...... ..+.+.+|++++++++||||+++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~----- 75 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS----- 75 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----
Confidence 478889999999999999999888899999988643322 135788999999999999999999985
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEE
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 854 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl 854 (1003)
.+.+..++|+||+++++|.+++.. .+.+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l 147 (267)
T cd06628 76 LDADHLNIFLEYVPGGSVAALLNN-----YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKI 147 (267)
T ss_pred EeCCccEEEEEecCCCCHHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEe
Confidence 345678999999999999999976 34688899999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCcccc-CcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH
Q 001858 855 SDFGLAKFLFDRPIQET-SSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~ 933 (1003)
+|||.++.......... ........|+..|+|||.+.+..++.++||||+||++|+|++|+.||......
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------- 218 (267)
T cd06628 148 SDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--------- 218 (267)
T ss_pred cccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH---------
Confidence 99999987643211111 11112345889999999998888999999999999999999999999753211
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
........ ...+ .........+.+++.+||+++|.+||++.|++++
T Consensus 219 ----~~~~~~~~---~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 219 ----QAIFKIGE---NASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ----HHHHHHhc---cCCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 01111111 1111 1112235677889999999999999999999874
No 194
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=8.4e-34 Score=312.83 Aligned_cols=260 Identities=24% Similarity=0.409 Sum_probs=204.2
Q ss_pred hccCCccCeeeeccceEEEEEEEC-----CCCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeeccc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLG-----EDLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 774 (1003)
.++|++.+.||+|+||.||+|.+. .++..||+|+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~----- 108 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC----- 108 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE-----
Confidence 457999999999999999999862 345679999987443 23346789999999999 799999999985
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEE
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 854 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl 854 (1003)
...+..++||||+.+|+|.++++... ...+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.+++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l 182 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKR---ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKI 182 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEE
Confidence 34567899999999999999997643 23489999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHH
Q 001858 855 SDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~ 933 (1003)
+|||+++....... ........++..|+|||.+.+..++.++||||+||++|||++ |+.||......
T Consensus 183 ~dfg~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--------- 250 (302)
T cd05055 183 CDFGLARDIMNDSN---YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--------- 250 (302)
T ss_pred CCCcccccccCCCc---eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch---------
Confidence 99999976532211 011112346788999999999999999999999999999998 99998654321
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
+...+.++....... .......+.+++.+|++.+|++||++.|+++.|+++
T Consensus 251 ----~~~~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 251 ----SKFYKLIKEGYRMAQ------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----HHHHHHHHcCCcCCC------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 111122221111110 011235688999999999999999999999999864
No 195
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.3e-34 Score=314.35 Aligned_cols=254 Identities=22% Similarity=0.369 Sum_probs=204.2
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.+.||+|+||.||+|.+..++..||+|+++.......+.+.+|++++++++|||++++++++ ..+...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY-----FYENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----ecCCeEE
Confidence 45799999999999999999999888999999999766555667899999999999999999999985 4466789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++... ...+++.+++.++.|++.|++|||+. +|+|+||+|+||+++.++.++|+|||.+.
T Consensus 79 lv~e~~~~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~ 151 (280)
T cd06611 79 ILIEFCDGGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSA 151 (280)
T ss_pred EEeeccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccch
Confidence 999999999999999764 34689999999999999999999999 99999999999999999999999999986
Q ss_pred ccccCCccccCcccccccccccccCccccC-----CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGM-----GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
...... .......|+..|+|||.+. +..++.++||||+|+++|||++|+.||.......
T Consensus 152 ~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~----------- 215 (280)
T cd06611 152 KNKSTL-----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR----------- 215 (280)
T ss_pred hhcccc-----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-----------
Confidence 543211 1122356899999999864 3456789999999999999999999987542110
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..... ....+ ........+...+.+++.+||+.+|++||++.+++++
T Consensus 216 --~~~~~----~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 216 --VLLKI----LKSEP-PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --HHHHH----hcCCC-CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 01111 11100 0111112334567889999999999999999999986
No 196
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.2e-34 Score=325.11 Aligned_cols=272 Identities=21% Similarity=0.198 Sum_probs=202.9
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecc-cCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSID-FKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 777 (1003)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+++.++||||+++++++.... ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 357899999999999999999999989999999998743 2334567889999999999999999998864322 2334
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++ ++.+.+.. .+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeC
Confidence 567999999976 78887753 477889999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh--
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-- 935 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-- 935 (1003)
|+++...... ......||..|+|||++.+..++.++||||+||++|||++|+.||......+. ........
T Consensus 171 G~a~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~ 243 (364)
T cd07875 171 GLARTAGTSF------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGT 243 (364)
T ss_pred CCccccCCCC------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCC
Confidence 9997643221 12235689999999999999999999999999999999999999976432111 11111100
Q ss_pred CchhHHH----HHHhhcccCCCCch----------------hhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 LPEKVME----IVDFALLLDPGNER----------------AKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ~~~~~~~----~i~~~l~~~~~~~~----------------~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...+... .+.......|.... .........+.+++.+|++.||++|||+.|+++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0011111 11111111110000 0001123467899999999999999999999986
No 197
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.1e-34 Score=313.50 Aligned_cols=253 Identities=23% Similarity=0.312 Sum_probs=201.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
+.|++.++||+|+||.||+|++..+++.||+|++........+.+.+|+++++.++|||++++++++ ..+...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF-----YWDGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEE-----EeCCeEEE
Confidence 5799999999999999999999989999999999866666677899999999999999999999985 34567899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++++|.+++.+. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 87 v~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 159 (292)
T cd06644 87 MIEFCPGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAK 159 (292)
T ss_pred EEecCCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCcccee
Confidence 99999999999888653 34689999999999999999999999 999999999999999999999999999865
Q ss_pred cccCCccccCcccccccccccccCccccC-----CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGM-----GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
.... ........++..|+|||++. ...++.++||||+||++|||++|+.||......
T Consensus 160 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------------- 221 (292)
T cd06644 160 NVKT-----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------------- 221 (292)
T ss_pred cccc-----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-------------
Confidence 4221 11122345888999999874 345678999999999999999999998653210
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+.......+ ........+...+.+++.+||+.+|++||+++|++++
T Consensus 222 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 222 ----RVLLKIAKSEP-PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ----HHHHHHhcCCC-ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00011111111 0011112334567889999999999999999999874
No 198
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.3e-34 Score=313.61 Aligned_cols=265 Identities=20% Similarity=0.293 Sum_probs=208.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++ ......
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF-----LNENNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeE-----ecCCEE
Confidence 357888999999999999999999889999999886443 33357899999999999999999999985 345778
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++++|.+++.. .+.+++..+..++.+++.|+.|||+.. +++||||+|+||+++.++.++|+|||++
T Consensus 79 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKK-----GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred EEEEecCCCCCHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 999999999999999876 346899999999999999999999732 8999999999999999999999999998
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
....... .....|+..|+|||++.+..++.++||||+||++|+|++|+.||......+.. ...+..+
T Consensus 152 ~~~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~------~~~~~~~ 218 (284)
T cd06620 152 GELINSI-------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG------QDDPMGI 218 (284)
T ss_pred cchhhhc-------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh------hhhhhHH
Confidence 6542211 11346899999999998888999999999999999999999999764332110 0111122
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+.+.......+.. ....+....+.+++.+|++++|++||++.|++++..-
T Consensus 219 ~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~ 269 (284)
T cd06620 219 LDLLQQIVQEPPPR--LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269 (284)
T ss_pred HHHHHHHhhccCCC--CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 22333322221111 1112245678899999999999999999999987543
No 199
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.5e-34 Score=321.41 Aligned_cols=239 Identities=26% Similarity=0.322 Sum_probs=190.7
Q ss_pred CeeeeccceEEEEEEE---CCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEe
Q 001858 709 NLIGQGSFGFVYRGNL---GEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
+.||+|+||.||++++ ..+++.||+|+++... ......+.+|++++++++||||+++++++ .+++..++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence 6799999999999886 3567899999997433 22345678899999999999999999984 456788999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
|||+++|+|.+++.+ ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 77 ~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 148 (318)
T cd05582 77 LDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 148 (318)
T ss_pred EcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCccc
Confidence 999999999999976 34689999999999999999999999 9999999999999999999999999999754
Q ss_pred ccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
.... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||...... .....
T Consensus 149 ~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--------------~~~~~ 209 (318)
T cd05582 149 IDHE-----KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--------------ETMTM 209 (318)
T ss_pred CCCC-----CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--------------HHHHH
Confidence 3221 1122356899999999998888999999999999999999999999753211 11111
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMAD 986 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e 986 (1003)
+......-| ......+.+++.+|++.+|++||++.+
T Consensus 210 i~~~~~~~p-------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 210 ILKAKLGMP-------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHcCCCCCC-------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 111111111 123456788999999999999999544
No 200
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.2e-34 Score=315.56 Aligned_cols=267 Identities=22% Similarity=0.358 Sum_probs=199.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCC--------------CceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEe
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGED--------------LLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKII 766 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~--------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~ 766 (1003)
.++|++.+.||+|+||.||+|.+.+. ...||+|+++... ......|.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 36899999999999999999987532 2358999987442 22345789999999999999999999
Q ss_pred eeeeecccCCCCceEEeeecccCCCHHHHHhhcCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccC
Q 001858 767 TVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQ-------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDL 839 (1003)
Q Consensus 767 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di 839 (1003)
+++ ......++||||+++++|.+++...... ....+++.+++.++.|++.|++|||+. +++||||
T Consensus 84 ~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dl 155 (295)
T cd05097 84 GVC-----VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDL 155 (295)
T ss_pred EEE-----cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence 985 4466789999999999999999653211 012478899999999999999999999 9999999
Q ss_pred CCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh--CCCC
Q 001858 840 KPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT--GRRP 917 (1003)
Q Consensus 840 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~--g~~P 917 (1003)
||+||+++.++.+|++|||++......... .......++..|+|||+..++.++.++|||||||++|||++ |..|
T Consensus 156 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p 232 (295)
T cd05097 156 ATRNCLVGNHYTIKIADFGMSRNLYSGDYY---RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQP 232 (295)
T ss_pred ChhhEEEcCCCcEEecccccccccccCcce---eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999765332211 11122345778999999988899999999999999999998 5667
Q ss_pred CCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 918 THTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
|......+ ... ...+.......... .......+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 233 ~~~~~~~~-~~~---------~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 233 YSLLSDEQ-VIE---------NTGEFFRNQGRQIY---LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CcccChHH-HHH---------HHHHhhhhcccccc---CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 65432110 000 00000010000000 0001113457899999999999999999999998875
No 201
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5e-34 Score=315.81 Aligned_cols=267 Identities=25% Similarity=0.411 Sum_probs=207.4
Q ss_pred hccCCccCeeeeccceEEEEEEECC-------CCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeec
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE-------DLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSI 772 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 772 (1003)
.++|.+.+.||+|+||.||+|++.. +...||+|.++... ......+.+|+++++++ +||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-- 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--
Confidence 4679999999999999999998743 23469999997542 23356788899999999 7999999999863
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCC
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQ-----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKP 841 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp 841 (1003)
..+..++||||+++|+|.+++...... ....+++.++..++.|++.|++|||+. +++||||||
T Consensus 95 ---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 95 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 456789999999999999999875321 134689999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCc
Q 001858 842 SNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHT 920 (1003)
Q Consensus 842 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~ 920 (1003)
+||+++.++.+|++|||.++......... ......++..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~ 245 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 245 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhh---ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 99999999999999999997653211110 1111224568999999988889999999999999999998 8888854
Q ss_pred ccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhhh
Q 001858 921 MFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKYK 999 (1003)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~~ 999 (1003)
... +++.+.+..... ......+..++.+++.+|+..+|++||++.|+++.|.++.+...
T Consensus 246 ~~~--------------~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 246 VPV--------------EELFKLLKEGHR------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred CCH--------------HHHHHHHHcCCC------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 221 112222221111 11122345678889999999999999999999999999877644
No 202
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.9e-34 Score=323.98 Aligned_cols=266 Identities=23% Similarity=0.357 Sum_probs=205.7
Q ss_pred HHhccCCccCeeeeccceEEEEEEECC-----CCceEEEEEecccc-ccchHHHHHHHHHHHhcC-CCCceeEeeeeeec
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQ-KGSIKSFVAECEALKNIR-HRNLIKIITVCSSI 772 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 772 (1003)
...++|.+.+.||+|+||.||+|++.+ .++.||+|+++... ....+.+.+|++++.++. ||||+++++++.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~-- 111 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT-- 111 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc--
Confidence 345678899999999999999999643 45689999997443 223457899999999997 999999999863
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCC--------------------------------------------------
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQ-------------------------------------------------- 802 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------- 802 (1003)
..+..++|+||+++|+|.++++..+..
T Consensus 112 ---~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 112 ---KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred ---cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 356789999999999999999764310
Q ss_pred -------------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccC
Q 001858 803 -------------------------------------------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDL 839 (1003)
Q Consensus 803 -------------------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di 839 (1003)
....+++.++..++.|++.|++|||+. +|+||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdl 265 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDL 265 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccC
Confidence 012467788899999999999999998 9999999
Q ss_pred CCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCC
Q 001858 840 KPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPT 918 (1003)
Q Consensus 840 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~ 918 (1003)
||+||+++.++.+|++|||+++........ .......++..|+|||.+.+..++.++||||+||++|||++ |+.||
T Consensus 266 kp~NiLl~~~~~~kL~DfGla~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~ 342 (401)
T cd05107 266 AARNVLICEGKLVKICDFGLARDIMRDSNY---ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY 342 (401)
T ss_pred CcceEEEeCCCEEEEEecCcceeccccccc---ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999765322110 11122357889999999988889999999999999999998 88998
Q ss_pred CcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 919 HTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
......+ ...+.+...... .....+...+.+++.+||..+|++||+++|+++.|+.+.
T Consensus 343 ~~~~~~~-------------~~~~~~~~~~~~------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 343 PELPMNE-------------QFYNAIKRGYRM------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCchH-------------HHHHHHHcCCCC------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 6543211 111222211111 011123467889999999999999999999999998764
No 203
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.8e-34 Score=319.70 Aligned_cols=202 Identities=27% Similarity=0.359 Sum_probs=172.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|+.+++.++|+||+++++++ .+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 4789999999999999999999999999999998642 233456788999999999999999999984 45678
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.+. ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 148 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGS 148 (331)
T ss_pred EEEEEecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCc
Confidence 89999999999999999763 34688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCC-----CCCCccccchhHHHHHHHHHhCCCCCCc
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-----GNVSLTGDVYSFGILLLEMFTGRRPTHT 920 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~ell~g~~P~~~ 920 (1003)
+..+..... .......||+.|+|||++.. ..++.++||||+||++|||++|+.||..
T Consensus 149 ~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 149 CLRLLADGT----VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred eeecCCCCC----ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 976533211 11122468999999999863 4578899999999999999999999965
No 204
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.4e-34 Score=313.27 Aligned_cols=253 Identities=24% Similarity=0.318 Sum_probs=200.3
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.|+..+.||+|+||+||+|.+..+++.||+|.+..... ...+.+.+|+.++++++|++++++++.+ ..++..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE-----ecCCEE
Confidence 36778899999999999999999999999999864322 2234677899999999999999999885 445678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++++|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred EEEEEecCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 99999999999999986543 34589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||........ . +..
T Consensus 150 ~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~--~--------~~~ 213 (285)
T cd05630 150 VHVPEGQ------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--R--------EEV 213 (285)
T ss_pred eecCCCc------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch--H--------HHH
Confidence 7543221 11234689999999999999999999999999999999999999975432100 0 001
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-----MADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~ 990 (1003)
....+..... ........+.+++.+|++.+|++||+ ++|+.++
T Consensus 214 ~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 214 ERLVKEVQEE-------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred Hhhhhhhhhh-------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 1111100000 01123456788999999999999999 8899875
No 205
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-34 Score=314.25 Aligned_cols=260 Identities=24% Similarity=0.407 Sum_probs=201.9
Q ss_pred ccCCccCeeeeccceEEEEEEECC-----CCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
.+|++.+.||+|+||.||+|.+.. .++.||+|+++..... ..+.+.+|+.+++.++||||+++++++ ..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~ 79 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVV-----TK 79 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----cC
Confidence 457788999999999999998753 3578999999744332 246788999999999999999999985 44
Q ss_pred CCceEEeeecccCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceE
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSND-----------QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVL 845 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nil 845 (1003)
....++++||+++++|.+++..... .....+++..++.++.|++.|++|+|+. +|+||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 5667999999999999999864321 1123588899999999999999999999 9999999999999
Q ss_pred eCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 001858 846 LDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFND 924 (1003)
Q Consensus 846 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~ 924 (1003)
+++++.+||+|||+++........ .......+++.|+|||++.++.++.++||||+||++|||++ |..||.....
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~- 232 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYY---KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN- 232 (283)
T ss_pred ecCCCceEecccccccccccchhe---eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 999999999999998765332211 11122346789999999988889999999999999999998 8888765321
Q ss_pred cchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 925 GLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+..+.+... .. .+....++..+.+++.+||+.+|++||+++||++.|+.
T Consensus 233 -------------~~~~~~i~~~---~~---~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 -------------QDVIEMIRNR---QV---LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -------------HHHHHHHHcC---Cc---CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111111 11 11122355678899999999999999999999998864
No 206
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.5e-34 Score=307.53 Aligned_cols=256 Identities=26% Similarity=0.438 Sum_probs=195.2
Q ss_pred CeeeeccceEEEEEEECC---CCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGE---DLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||.||+|.+.. ....||+|.+.... ....+.+.+|+.+++.++|||++++++++. ..++..++|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICL----PSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEee----cCCCCcEEEE
Confidence 468999999999998643 34679999885332 334578889999999999999999999763 2345678999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+.+|+|.+++.... ....+..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++...
T Consensus 77 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 77 PYMKHGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIY 149 (262)
T ss_pred ecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcccccccc
Confidence 9999999999997642 3467788899999999999999999 99999999999999999999999999997654
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhC-CCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTG-RRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
+...... .......++..|+|||+..+..++.++|||||||++|||++| ..||..... ......
T Consensus 150 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--------------~~~~~~ 214 (262)
T cd05058 150 DKEYYSV-HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--------------FDITVY 214 (262)
T ss_pred CCcceee-cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--------------HHHHHH
Confidence 3221111 111233467789999999888999999999999999999995 555543211 011111
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
+ ....+ ....+..+..+.+++.+||+++|++||++.|+++.++++..
T Consensus 215 ~---~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 215 L---LQGRR---LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred H---hcCCC---CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 1 11111 01111234578899999999999999999999999988753
No 207
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.6e-34 Score=308.86 Aligned_cols=259 Identities=28% Similarity=0.470 Sum_probs=203.0
Q ss_pred hccCCccCeeeeccceEEEEEEECCCC---ceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDL---LPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
..+|++.+.||+|+||.||+|.+..++ ..+|+|.++... ....+.+.+|+.++++++||||+++++++ .++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKS 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 357889999999999999999885433 479999886432 23356889999999999999999999985 446
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..++||||+++++|.+++... .+.+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++||
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKH----DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCC
Confidence 6789999999999999999764 24689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|++..+...... ........++..|+|||++.+..++.++||||+|+++||+++ |+.||......
T Consensus 151 g~~~~~~~~~~~--~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~------------ 216 (267)
T cd05066 151 GLSRVLEDDPEA--AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ------------ 216 (267)
T ss_pred Ccccccccccce--eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH------------
Confidence 999866432211 111111234568999999998899999999999999999887 99998653221
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
+....+..... .+....++..+.+++.+|++.+|++||++.++++.|.++
T Consensus 217 --~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 217 --DVIKAIEEGYR------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --HHHHHHhCCCc------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11111111110 011122345778999999999999999999999998764
No 208
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.9e-34 Score=312.15 Aligned_cols=253 Identities=24% Similarity=0.352 Sum_probs=198.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.++||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++|||++++++++. .++..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF-----VENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----ECCEEE
Confidence 36788899999999999999999899999999986442 233467889999999999999999999854 356778
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|..+ ..+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++.
T Consensus 76 lv~e~~~~~~l~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~ 143 (279)
T cd06619 76 ICTEFMDGGSLDVY---------RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVST 143 (279)
T ss_pred EEEecCCCCChHHh---------hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcce
Confidence 99999999999654 2467888999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
..... ......||..|+|||++.+..++.++||||+|+++|+|++|+.||.......... .+....
T Consensus 144 ~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-------~~~~~~ 209 (279)
T cd06619 144 QLVNS-------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-------MPLQLL 209 (279)
T ss_pred ecccc-------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-------chHHHH
Confidence 55322 1123568999999999999899999999999999999999999997543221111 001111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
..+ ....+... ........+.+++.+|++.+|++||+++|++++-
T Consensus 210 ~~~---~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 210 QCI---VDEDPPVL--PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred HHH---hccCCCCC--CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 111 11111110 0111235678999999999999999999998864
No 209
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.7e-34 Score=313.13 Aligned_cols=266 Identities=25% Similarity=0.419 Sum_probs=206.5
Q ss_pred HhccCCccCeeeeccceEEEEEEEC-------CCCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeee
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLG-------EDLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSS 771 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 771 (1003)
...+|.+.+.||+|+||.||+|++. .++..||+|...... ....+.+.+|+.+++.+ +||||+++++++
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-- 90 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-- 90 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE--
Confidence 3567899999999999999999752 234579999986432 33456789999999999 899999999985
Q ss_pred cccCCCCceEEeeecccCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCC
Q 001858 772 IDFKGDDFKALVYDYMQSGSLEDWLQQSNDQ-----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLK 840 (1003)
Q Consensus 772 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik 840 (1003)
......++||||+++|+|.+++...... ....+++.++..++.|++.|++|||+. +|+|||||
T Consensus 91 ---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 91 ---TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred ---ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 3456779999999999999999875321 124678899999999999999999999 99999999
Q ss_pred CCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCC
Q 001858 841 PSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTH 919 (1003)
Q Consensus 841 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~ 919 (1003)
|+||+++.++.+|++|||.++......... ......+++.|+|||+..+..++.++||||+|+++|||++ |..||.
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccc---cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 999999999999999999998653322111 1112345678999999988889999999999999999998 788875
Q ss_pred cccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 920 TMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
.... .++.+.+.... . ......+...+.+++.+||+.+|++||++.|+++.|+++..-
T Consensus 242 ~~~~--------------~~~~~~~~~~~---~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 242 GIPV--------------EELFKLLKEGH---R---MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred cCCH--------------HHHHHHHHcCC---c---CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 4321 11111111111 0 011123456788999999999999999999999999887654
No 210
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=304.96 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=204.3
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc--chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG--SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+.+-|.+.+.||+|.|+.|-+|++.-+|..||||++.+.+-+ ....+.+|++-|+.++|||||++|++ .....
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQT 90 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQT 90 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccc
Confidence 456799999999999999999999999999999999865433 34578899999999999999999998 56678
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC-CCCCeEEccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDF 857 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~Df 857 (1003)
..|+|+|.-++|+|+|||-++ +..+.+.-+.+++.||+.|+.|+|.. .+||||+||+||.+- .-|-+|++||
T Consensus 91 KlyLiLELGD~GDl~DyImKH----e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDF 163 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKH----EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDF 163 (864)
T ss_pred eEEEEEEecCCchHHHHHHhh----hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeec
Confidence 899999999999999999887 45689999999999999999999999 899999999998876 4689999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCC-ccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVS-LTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|++-.+.++. .-...+|+..|-|||.+.|..|+ +++||||+|||+|-+++|+.||+.....+
T Consensus 164 GFSNkf~PG~------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE----------- 226 (864)
T KOG4717|consen 164 GFSNKFQPGK------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE----------- 226 (864)
T ss_pred cccccCCCcc------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-----------
Confidence 9997665433 23346899999999999999987 67999999999999999999998643221
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+.-+++.. ...+.....+..+++..|+..||.+|.+.+||+.+
T Consensus 227 --TLTmImDCK--------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 227 --TLTMIMDCK--------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred --hhhhhhccc--------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 111111111 12223445566677777777777777777777653
No 211
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.3e-34 Score=342.22 Aligned_cols=261 Identities=21% Similarity=0.313 Sum_probs=202.5
Q ss_pred HHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
...++|++.+.||+|+||+||+|.+..++..||+|++.... ......|..|+.+++.++||||+++++++.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e~~ 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---KAN 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---cCC
Confidence 34578999999999999999999999999999999987432 2335678999999999999999999998532 334
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCcEeccCCCCceEeCCC----
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQ----PPIVHGDLKPSNVLLDHD---- 849 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~ivH~Dikp~Nill~~~---- 849 (1003)
...++||||+++|+|.++|...... .+.+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 5789999999999999999864322 3579999999999999999999998521 259999999999999642
Q ss_pred -------------CCeEEcccccccccccCCccccCcccccccccccccCccccCC--CCCCccccchhHHHHHHHHHhC
Q 001858 850 -------------MVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG--GNVSLTGDVYSFGILLLEMFTG 914 (1003)
Q Consensus 850 -------------~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~ell~g 914 (1003)
+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG 239 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIES------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG 239 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccc------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC
Confidence 358999999997653221 1123568999999998854 4588999999999999999999
Q ss_pred CCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 915 RRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 915 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.||...... . .+...+.. .+... .......+.+++..||+.+|.+||++.|++.+
T Consensus 240 k~PF~~~~~~----~---------qli~~lk~----~p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 240 KTPFHKANNF----S---------QLISELKR----GPDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CCCCCcCCcH----H---------HHHHHHhc----CCCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 9999643211 0 11111111 11100 11224568899999999999999999999854
No 212
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=7.3e-34 Score=309.86 Aligned_cols=260 Identities=24% Similarity=0.400 Sum_probs=204.0
Q ss_pred hccCCccCeeeeccceEEEEEEECCC-----CceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGED-----LLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 775 (1003)
.++|++.+.||+|+||.||+|.+... +..||+|.+.... ......+.+|+++++.++||||+++++++ .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~ 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----S 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----c
Confidence 46789999999999999999998643 4789999986443 23345788999999999999999999985 4
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQ-----VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 850 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~ 850 (1003)
.....++||||+++|+|.+++...... ....+++.+++.++.|++.|++|||+. +++||||||+||+++.++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 457789999999999999999764322 123578899999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhh
Q 001858 851 VAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLH 929 (1003)
Q Consensus 851 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~ 929 (1003)
.+||+|||+++........ .......++..|+|||...++.++.++||||+||++||+++ |+.||......
T Consensus 157 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----- 228 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYY---RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE----- 228 (277)
T ss_pred CEEECCcccchhhccCccc---ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-----
Confidence 9999999999765432211 11122346789999999988889999999999999999998 99998643211
Q ss_pred HHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 930 GFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
...+.+...... .....+...+.+++.+||+.+|++||++.|+++.|+
T Consensus 229 ---------~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 229 ---------EVLKFVIDGGHL------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ---------HHHHHHhcCCCC------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111111000 111123567889999999999999999999998875
No 213
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-35 Score=325.34 Aligned_cols=257 Identities=26% Similarity=0.409 Sum_probs=210.8
Q ss_pred cCCccCeeeeccceEEEEEEECCCC----ceEEEEEeccc-cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDL----LPVAVKVINLK-QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+.+..++||.|+||+||+|.+-..+ .+||||++... .....+++.+|+.+|.+++|||+++++++|...
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 3456789999999999999996554 47999988633 344568899999999999999999999998542
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
...+|++||+.|+|.|+++.++ +.+.....+.|..|||+||.|||++ ++|||||.++||||..-..+||+|||
T Consensus 771 ~~qlvtq~mP~G~LlDyvr~hr----~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfg 843 (1177)
T KOG1025|consen 771 TLQLVTQLMPLGCLLDYVREHR----DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFG 843 (1177)
T ss_pred hHHHHHHhcccchHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecc
Confidence 2689999999999999999974 5688889999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
+|+........ .......-.+.|||=|.+....++.++|||||||++||++| |..|+..+..
T Consensus 844 la~ll~~d~~e---y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-------------- 906 (1177)
T KOG1025|consen 844 LAKLLAPDEKE---YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-------------- 906 (1177)
T ss_pred hhhccCccccc---ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--------------
Confidence 99877543211 11112234678999999999999999999999999999999 9999887543
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
+++.+.++.. +|.+.++-+..+++.++.+||..|+..||+++++...+.+.-+
T Consensus 907 ~eI~dlle~g------eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 907 EEIPDLLEKG------ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHhhHHHhcc------ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 2333333322 2334445677889999999999999999999999999877544
No 214
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.7e-34 Score=307.50 Aligned_cols=254 Identities=27% Similarity=0.475 Sum_probs=203.0
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.++||+|+||.||+|... +++.||+|.+.... ...+++.+|+.++++++|||++++++++ ..+..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~------~~~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV------TQEPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE------ccCCcE
Confidence 467899999999999999999875 56789999987433 3457899999999999999999999874 234679
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
++|||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||++.
T Consensus 77 ~v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 77 IITEYMENGSLVDFLKTPE---GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred EEEEcCCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCccee
Confidence 9999999999999987643 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
........ ......++..|+|||++.+..++.++||||+|+++|||++ |+.||...... ..
T Consensus 151 ~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------------~~ 212 (260)
T cd05067 151 LIEDNEYT----AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------------EV 212 (260)
T ss_pred ecCCCCcc----cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------------HH
Confidence 65422211 1112346778999999988889999999999999999999 99999753311 11
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+.+..... .+.......++.+++.+|+..+|++||+++++.+.|+.
T Consensus 213 ~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 213 IQNLERGYR------MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHcCCC------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111111110 01112234578999999999999999999999998864
No 215
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=8e-34 Score=305.78 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=197.5
Q ss_pred CeeeeccceEEEEEEECCCC---ceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDL---LPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
++||+|+||.||+|++...+ ..||+|.++.... ...+.+.+|+++++++.|||++++++++. ....++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 47999999999999875544 7899999874443 24567899999999999999999999752 34568999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++++|.+++... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++...
T Consensus 75 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~ 146 (257)
T cd05060 75 ELAPLGPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALG 146 (257)
T ss_pred EeCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceee
Confidence 999999999999873 3689999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
..... ........++..|+|||...+..++.++|||||||++|||++ |+.||...... +....
T Consensus 147 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--------------~~~~~ 210 (257)
T cd05060 147 AGSDY--YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--------------EVIAM 210 (257)
T ss_pred cCCcc--cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--------------HHHHH
Confidence 32211 111111224568999999998899999999999999999998 99998654211 11111
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
+... .+. +....+...+.+++.+||+++|++||++.++.+.|++..
T Consensus 211 ~~~~---~~~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 211 LESG---ERL---PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHcC---CcC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 1111 110 111223457889999999999999999999999998764
No 216
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.8e-34 Score=314.13 Aligned_cols=252 Identities=22% Similarity=0.281 Sum_probs=204.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|++.+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++|||++++++++ ..++..+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCEEE
Confidence 46899999999999999999999889999999999765555567889999999999999999999985 4466789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.+ ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.
T Consensus 93 lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred EeecccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccce
Confidence 99999999999999864 3578899999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......+++.|+|||...+..++.++||||+||++|+|++|+.||..........
T Consensus 164 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------------- 225 (297)
T cd06656 164 QITPEQ-----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------------- 225 (297)
T ss_pred EccCCc-----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-------------
Confidence 643221 11123458889999999988889999999999999999999999996532211000
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.......+ ...........+.+++.+||+.+|++||+++|++++
T Consensus 226 ---~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 226 ---LIATNGTP--ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred ---eeccCCCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 011122334567789999999999999999999984
No 217
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-33 Score=304.83 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=202.1
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.|++.+.||+|++|.||+|.+..+++.||+|.+.... ....+.+.+|++++++++|||++++.+.+. ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 4888999999999999999998889999999986432 234567899999999999999999988642 2344678
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.... ...+++.+++.++.+++.|++|||+. +++||||||+||+++.++.++|+|||++.
T Consensus 77 lv~e~~~~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~ 150 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIAR 150 (257)
T ss_pred EEecccCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceE
Confidence 9999999999999998643 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......+++.|+|||+..+..++.++||||+|+++|+|++|+.||...... . ...
T Consensus 151 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-----~--------~~~ 212 (257)
T cd08223 151 VLENQC-----DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-----S--------LVY 212 (257)
T ss_pred EecccC-----CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----H--------HHH
Confidence 653221 1222356889999999999999999999999999999999999998643211 0 001
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.... ..... ........+.+++.+|++.+|++||++.|++++
T Consensus 213 ~~~~-~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 213 RIIE-GKLPP------MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHh-cCCCC------CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111 11101 112344678899999999999999999999875
No 218
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.3e-33 Score=304.12 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=205.0
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|+..+.||+|+||.||.++...+++.+++|.+.... ....+.+.+|++++++++|+||+++++++ .+.+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHF-----MDDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEE-----ecCCeEE
Confidence 5888999999999999999999999999999986432 34456789999999999999999999995 4467789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
++|||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+.
T Consensus 76 ~~~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~ 149 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISK 149 (256)
T ss_pred EEEEecCCCcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceE
Confidence 9999999999999998643 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
....... ......|++.|+|||...+..++.++||||+|+++|||++|+.||...... +...
T Consensus 150 ~~~~~~~-----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-------------~~~~ 211 (256)
T cd08221 150 ILGSEYS-----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-------------NLVV 211 (256)
T ss_pred Ecccccc-----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-------------HHHH
Confidence 6533221 122356899999999998888899999999999999999999998642211 1111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.... .... +........+.+++.+||..+|++||++.|++++.
T Consensus 212 ~~~~----~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 212 KIVQ----GNYT---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHc----CCCC---CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1111 1111 11133456688999999999999999999998764
No 219
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.4e-33 Score=308.73 Aligned_cols=274 Identities=23% Similarity=0.362 Sum_probs=204.5
Q ss_pred ccCCccCeeeeccceEEEEEEE----CCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNL----GEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
..|++.+.||+|+||.||.|+. ..++..||+|.++... ....+.+.+|+++++.++|||++++.+++.. .+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCC
Confidence 3578889999999999999985 3467889999987443 3335689999999999999999999998643 224
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++++|.+++.+. ...+++.++..++.|++.|++|+|+. +++||||||+||+++.++.++++||
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCC
Confidence 5679999999999999999763 23589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC-
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL- 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~- 936 (1003)
|+++.+...... ........++..|+|||+..+..++.++||||+||++|||++++.|+...... .........
T Consensus 154 g~~~~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~~~~ 228 (284)
T cd05079 154 GLTKAIETDKEY--YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGPTHG 228 (284)
T ss_pred ccccccccCccc--eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcccccc
Confidence 999866432211 11112345677899999998888999999999999999999988764321110 000000000
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
.......+...... .+.+....+...+.+++.+|++.+|++||++.|+++.++++
T Consensus 229 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 229 QMTVTRLVRVLEEG---KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cccHHHHHHHHHcC---ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00011111111100 01111123456789999999999999999999999999875
No 220
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=6.7e-34 Score=306.14 Aligned_cols=250 Identities=25% Similarity=0.392 Sum_probs=195.6
Q ss_pred eeeeccceEEEEEEEC--CCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeec
Q 001858 710 LIGQGSFGFVYRGNLG--EDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDY 786 (1003)
Q Consensus 710 ~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 786 (1003)
.||+|+||.||+|.+. +.+..||+|+...... ...+.+.+|++++++++||||+++++++. ....++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 4899999999999875 3455799999875433 23467899999999999999999999853 3456899999
Q ss_pred ccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccC
Q 001858 787 MQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDR 866 (1003)
Q Consensus 787 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~ 866 (1003)
+++++|.+++... ...+++.++++++.|++.|++|||++ +++||||||+||+++.++.+|++|||++......
T Consensus 76 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 148 (257)
T cd05115 76 ASGGPLNKFLSGK----KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGAD 148 (257)
T ss_pred CCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCC
Confidence 9999999999753 34689999999999999999999999 9999999999999999999999999999755322
Q ss_pred CccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHHH
Q 001858 867 PIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVD 945 (1003)
Q Consensus 867 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 945 (1003)
.... .......++..|+|||...+..++.++|||||||++||+++ |+.||...... .....+.
T Consensus 149 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------------~~~~~~~ 212 (257)
T cd05115 149 DSYY--KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------------EVMSFIE 212 (257)
T ss_pred ccce--eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------------HHHHHHH
Confidence 1111 11111234678999999888889999999999999999996 99998754321 1122222
Q ss_pred hhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 946 FALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
...... ....+..++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 213 ~~~~~~------~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 213 QGKRLD------CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCC------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 211111 1122356788999999999999999999999998865
No 221
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.3e-34 Score=311.79 Aligned_cols=266 Identities=22% Similarity=0.311 Sum_probs=207.3
Q ss_pred cHHHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeec
Q 001858 694 SYAELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSI 772 (1003)
Q Consensus 694 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 772 (1003)
+..++..+.+.|++.+.||+|+||.||+|++..+++.||+|++.... .....+..|+.+++++ +|||++++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44555567789999999999999999999999899999999986443 3346788899999998 799999999986432
Q ss_pred cc-CCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCC
Q 001858 773 DF-KGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 851 (1003)
Q Consensus 773 ~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~ 851 (1003)
.. ......+++|||+++|+|.+++.... ...+++..++.++.|++.|++|||+. +|+||||+|+||+++.++.
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 11 23567899999999999999998644 34578889999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccC-----CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcc
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM-----GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGL 926 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~ 926 (1003)
++|+|||++....... .......|+..|+|||.+. ...++.++||||+||++|||++|+.||.......
T Consensus 160 ~~l~dfg~~~~~~~~~-----~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~- 233 (282)
T cd06636 160 VKLVDFGVSAQLDRTV-----GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR- 233 (282)
T ss_pred EEEeeCcchhhhhccc-----cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh-
Confidence 9999999987542211 1122356899999999875 3467889999999999999999999986532110
Q ss_pred hhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 927 TLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.... +... . ........+...+.+++.+||+.+|++||++.|++++
T Consensus 234 ------------~~~~-~~~~--~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 234 ------------ALFL-IPRN--P---PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ------------hhhh-HhhC--C---CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 0000 0100 0 0111112345678999999999999999999999864
No 222
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-33 Score=314.09 Aligned_cols=268 Identities=25% Similarity=0.423 Sum_probs=207.1
Q ss_pred hccCCccCeeeeccceEEEEEEEC-------CCCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeec
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLG-------EDLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSI 772 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 772 (1003)
.++|.+.++||+|+||.||+|++. .....||+|+++... ......+.+|+++++++ +||||+++++++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--- 87 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC--- 87 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE---
Confidence 467889999999999999999863 234579999987432 23356788999999999 699999999985
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCC
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQ-----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKP 841 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp 841 (1003)
.+.+..++||||+++|+|.+++...... ....+++.++..++.|++.|++|||++ +++||||||
T Consensus 88 --~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 88 --TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred --ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 3456789999999999999999774321 134689999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCc
Q 001858 842 SNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHT 920 (1003)
Q Consensus 842 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~ 920 (1003)
+||+++.++.+|++|||.++.......... .....++..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYKK---TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccccc---cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999976543221111 111224567999999988899999999999999999999 8888865
Q ss_pred ccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhhhc
Q 001858 921 MFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKYKG 1000 (1003)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~~~ 1000 (1003)
... .+..+.+..... ......+..++.+++.+|++.+|++||++.|+++.|.++.....+
T Consensus 240 ~~~--------------~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 299 (314)
T cd05099 240 IPV--------------EELFKLLREGHR------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSE 299 (314)
T ss_pred CCH--------------HHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcC
Confidence 321 111111111110 011123345778899999999999999999999999998765543
No 223
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1e-33 Score=305.81 Aligned_cols=253 Identities=32% Similarity=0.544 Sum_probs=203.1
Q ss_pred CeeeeccceEEEEEEECCC---CceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGED---LLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||.||+|.+... +..||+|+++..... ..+.+.+|++.++.++|+|++++++++ ......++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVC-----TEEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeee-----cCCCceEEEE
Confidence 4799999999999999865 889999999755433 367899999999999999999999985 3467789999
Q ss_pred ecccCCCHHHHHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQ----VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
||+++++|.++++..... ....+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999874211 125789999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchh
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
........ ........++..|+|||...+..++.++||||+|+++|||++ |..||..... .+
T Consensus 153 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------------~~ 215 (262)
T cd00192 153 RDVYDDDY---YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------------EE 215 (262)
T ss_pred cccccccc---cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------------HH
Confidence 87643321 111223457889999999988889999999999999999999 6999876421 11
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
..+.+... .+......++.++.+++.+|++.+|++||++.|++++|+
T Consensus 216 ~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 216 VLEYLRKG------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHcC------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11111111 111112233567889999999999999999999998873
No 224
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.6e-35 Score=319.62 Aligned_cols=249 Identities=23% Similarity=0.396 Sum_probs=200.8
Q ss_pred CccCeeeeccceEEEEEEECCCCceEEEEEecc----ccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 706 SLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINL----KQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 706 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+...+||+|+|-+||+|.+..+|..||--.++. .++...++|..|+.+++.++||||++++..... .......
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d---~~n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVD---TDNKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheec---CCCceee
Confidence 456789999999999999999999888544432 234446899999999999999999999988543 2235678
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC-CCCCeEEcccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLA 860 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~DfG~a 860 (1003)
+|+|.|..|+|..|++++ +.++...++.|++||++||.|||++ .|+|+|||||-+||+|+ ..|.|||+|.|+|
T Consensus 120 ~iTEL~TSGtLr~Y~kk~-----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA 193 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKH-----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA 193 (632)
T ss_pred eeeecccCCcHHHHHHHh-----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHH
Confidence 999999999999999995 5788899999999999999999998 78999999999999997 4689999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
+..... ....++|||.|||||... ..|+..+||||||++++||+|+.+||....+..+.+........|..+
T Consensus 194 tl~r~s-------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl 265 (632)
T KOG0584|consen 194 TLLRKS-------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAAL 265 (632)
T ss_pred HHhhcc-------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHh
Confidence 876332 223478999999999755 889999999999999999999999998765543333333222223222
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+- ...+.+++.+|+.. .++||++.|++.+
T Consensus 266 ~kV~------------------dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 266 SKVK------------------DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred hccC------------------CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 2211 23577899999998 8999999999874
No 225
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=284.61 Aligned_cols=253 Identities=21% Similarity=0.292 Sum_probs=203.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++.+....+|.|..|.||+++...++...|||.+.... ..+.+++...++++..-+ .|.||+.+|| |..+..+
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~Gy-----Fi~n~dV 166 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGY-----FITNTDV 166 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeE-----EeeCchH
Confidence 34556678999999999999999999999999997554 344677777888776664 8999999999 4556777
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
+++||.|.. .+..+++.. .+++++.-+-++...+..|+.||.+++ +|+|||+||+|||+|+.|++|+||||++
T Consensus 167 ~IcMelMs~-C~ekLlkri----k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIs 239 (391)
T KOG0983|consen 167 FICMELMST-CAEKLLKRI----KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGIS 239 (391)
T ss_pred HHHHHHHHH-HHHHHHHHh----cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccc
Confidence 899999965 666666654 456899888899999999999999886 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCC---CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG---NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
.++.+... .....|.+.|||||.+... .|+.++||||||+.++|+.||++||.....+
T Consensus 240 GrlvdSkA------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td------------- 300 (391)
T KOG0983|consen 240 GRLVDSKA------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD------------- 300 (391)
T ss_pred ceeecccc------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-------------
Confidence 87755332 2234689999999998654 6889999999999999999999999874322
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.++..+.+...| +..+........+.+++..|++.|+.+||...++++|
T Consensus 301 ---Fe~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 301 ---FEVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ---HHHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 122233333334 3333334477889999999999999999999999875
No 226
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.2e-33 Score=306.13 Aligned_cols=255 Identities=22% Similarity=0.332 Sum_probs=197.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-----ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-----KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.+|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 47899999999999999999999889999999886432 1234578899999999999999999998532 234
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++++||+++++|.+++.. .+.+++..++.++.|++.|++|||+. +|+||||+|+||+++.++.+||+||
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~df 150 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKA-----YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 150 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 567899999999999999976 34588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
|+++....... .........++..|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 151 g~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~------------- 215 (266)
T cd06651 151 GASKRLQTICM--SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM------------- 215 (266)
T ss_pred CCccccccccc--cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-------------
Confidence 99976532111 111122345889999999999888999999999999999999999998753211
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+....... ....+ .........+..++ .||..+|++||+++|+++|
T Consensus 216 ~~~~~~~~--~~~~~----~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 216 AAIFKIAT--QPTNP----QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHHHhc--CCCCC----CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 01111100 00111 11112233445555 6888999999999999875
No 227
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.7e-33 Score=303.86 Aligned_cols=253 Identities=29% Similarity=0.502 Sum_probs=200.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
++|++.+.||+|+||.||+|.+... ..||+|.+.... ...+.+.+|++++++++|||++++++++. ....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcEE
Confidence 5688999999999999999998654 469999876432 33467899999999999999999998742 345689
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.++.
T Consensus 78 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~ 151 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARL 151 (260)
T ss_pred EEEcCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceE
Confidence 999999999999997643 34588999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
....... ......++..|+|||+..+..++.++||||+|+++|||++ |+.||...... +..
T Consensus 152 ~~~~~~~----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------------~~~ 213 (260)
T cd05069 152 IEDNEYT----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--------------EVL 213 (260)
T ss_pred ccCCccc----ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------------HHH
Confidence 5332211 1112346778999999988899999999999999999999 89998753211 111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
+.+..... + +.....+..+.+++.+||..+|++||+++++.+.|++
T Consensus 214 ~~~~~~~~--~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 214 EQVERGYR--M----PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHcCCC--C----CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11111110 0 1112345678899999999999999999999998875
No 228
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=7.9e-34 Score=305.71 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=204.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.+.||+|+||.||+|.+..+++.||+|.++.... .+.+.+|++++++++|||++++++++ ..+...+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSY-----FKNTDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCcEE
Confidence 3679999999999999999999998889999999875433 67899999999999999999999985 4457789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+++||+++++|.+++... ...+++.+++.++.|++.|++|||+. +++||||+|+||+++.++.++++|||++.
T Consensus 75 l~~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 75 IVMEYCGAGSVSDIMKIT----NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEEecCCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 999999999999999763 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......|+..|+|||++.+..++.++||||+|+++|+|++|+.||.........
T Consensus 148 ~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-------------- 208 (256)
T cd06612 148 QLTDTM-----AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-------------- 208 (256)
T ss_pred hcccCc-----cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh--------------
Confidence 653321 1122345788999999998889999999999999999999999998753221100
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+.. ...............+.+++.+||+.+|++||++.|++++
T Consensus 209 ~~~~~----~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 209 FMIPN----KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hhhcc----CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 00000 0001111122344678899999999999999999999864
No 229
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.2e-34 Score=311.32 Aligned_cols=270 Identities=22% Similarity=0.321 Sum_probs=199.8
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|++|+||+|++..+++.||+|.++... ....+.+.+|+.++++++|||++++++++ .++...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVL-----MQESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEE-----eeCCeEE
Confidence 4788899999999999999999899999999986432 23346788999999999999999999985 4567889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||++ ++|.+++..... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECccccee
Confidence 9999997 589998876432 35689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh--Cch
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA--LPE 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~--~~~ 938 (1003)
...... .......+++.|+|||++.+. .++.++||||+||++|||++|+.||......+.... ..... ..+
T Consensus 150 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~-~~~~~~~~~~ 223 (285)
T cd07861 150 AFGIPV-----RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFR-IFRILGTPTE 223 (285)
T ss_pred ecCCCc-----ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHhCCCCh
Confidence 543211 111223578899999987654 568899999999999999999999975432111100 00000 000
Q ss_pred h----HHHH--HHhhccc-CCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 K----VMEI--VDFALLL-DPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~----~~~~--i~~~l~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
. .... ....... ..............++.+++.+|++.+|++||++.+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 224 DVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 0000 0000000 0000001111234667899999999999999999999865
No 230
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8e-34 Score=312.05 Aligned_cols=251 Identities=23% Similarity=0.306 Sum_probs=204.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
.+|++.+.||.|+||.||+|.+..+++.||+|.+........+.+.+|+++++.++|||++++++++ ......++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF-----LVGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeE-----ecCceEEE
Confidence 4689999999999999999999889999999999766555667889999999999999999999985 44667899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
|+||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 94 v~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~ 164 (296)
T cd06655 94 VMEYLAGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQ 164 (296)
T ss_pred EEEecCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchh
Confidence 9999999999999864 3578999999999999999999999 999999999999999999999999999875
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME 942 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1003)
..... .......|+..|+|||.+.+..++.++||||+||++|+|++|+.||......+ ....
T Consensus 165 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-------------~~~~ 226 (296)
T cd06655 165 ITPEQ-----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------------ALYL 226 (296)
T ss_pred ccccc-----ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------------HHHH
Confidence 53221 11123458899999999988889999999999999999999999986532210 0000
Q ss_pred HHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 943 IVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 943 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+... ..+ .......+...+.+++.+||..+|++||++.+++.+
T Consensus 227 -~~~~--~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 227 -IATN--GTP--ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred -HHhc--CCc--ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 1100 000 011112344567889999999999999999999964
No 231
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5e-34 Score=318.74 Aligned_cols=256 Identities=22% Similarity=0.263 Sum_probs=195.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|++..+++.||+|++... .......+.+|..++..++|++|+++++++ .+++.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 4789999999999999999999999999999998642 223345688899999999999999999984 45678
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++... ...+++..+..++.|++.|++|+|++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~ 148 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGS 148 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccc
Confidence 89999999999999999864 24688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCC-----CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-----GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM 934 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~ 934 (1003)
+........ .......||+.|+|||++.+ +.++.++||||+||++|||++|+.||......
T Consensus 149 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---------- 214 (331)
T cd05624 149 CLKMNQDGT----VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---------- 214 (331)
T ss_pred eeeccCCCc----eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH----------
Confidence 976533211 11123569999999998765 46788999999999999999999999643211
Q ss_pred hCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 001858 935 ALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSE--RIHMADAVKN 990 (1003)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~ 990 (1003)
+............ ............+.+++.+|+...+++ |++++++.++
T Consensus 215 ---~~~~~i~~~~~~~---~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 215 ---ETYGKIMNHEERF---QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ---HHHHHHHcCCCcc---cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0011111100000 001111223455667777777755443 5688888765
No 232
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7.3e-34 Score=308.17 Aligned_cols=255 Identities=24% Similarity=0.367 Sum_probs=199.6
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
+++.+.....||+|+||.||+|++..++..||+|.+........+.+.+|+++++.++|+||+++++++ ..++..
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~ 80 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD-----SENGFF 80 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeee-----ccCCEE
Confidence 455566667899999999999999888899999998765555567899999999999999999999985 445778
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-CCCeEEccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNL--NLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDF 857 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Df 857 (1003)
++|+||+++++|.+++.... ..+ ++.++..++.|++.|++|||+. +|+||||||+||+++. ++.++|+||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred EEEEecCCCCCHHHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecc
Confidence 99999999999999998642 234 7888899999999999999999 9999999999999986 679999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCC--CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN--VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
|.+....... .......|+..|+|||+..+.. ++.++||||+|+++|+|++|+.||..........
T Consensus 154 g~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~------- 221 (268)
T cd06624 154 GTSKRLAGIN-----PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM------- 221 (268)
T ss_pred hhheecccCC-----CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH-------
Confidence 9997653211 1112245889999999976643 7889999999999999999999986432110000
Q ss_pred CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.. .......+ .........+.+++.+||+.+|++||++.|++++
T Consensus 222 -----~~--~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 222 -----FK--VGMFKIHP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred -----hh--hhhhccCC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00 00000111 1112344568899999999999999999999875
No 233
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=8e-34 Score=317.40 Aligned_cols=256 Identities=22% Similarity=0.259 Sum_probs=194.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.++||+|+||+||++++..+++.||+|++... .......+.+|+.++..++|++|+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 4688999999999999999999999999999998632 223345688899999999999999999884 45678
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++|+|.+++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~ 148 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 148 (332)
T ss_pred EEEEEeccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecch
Confidence 89999999999999999864 24688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccC-----CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM-----GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM 934 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~ 934 (1003)
+........ .......||+.|+|||++. ...++.++||||+||++|||++|+.||......
T Consensus 149 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~---------- 214 (332)
T cd05623 149 CLKLMEDGT----VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---------- 214 (332)
T ss_pred heecccCCc----ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH----------
Confidence 975432211 1112346999999999876 346788999999999999999999999653211
Q ss_pred hCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhcccc--CCCCCCCHHHHHHH
Q 001858 935 ALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSME--SPSERIHMADAVKN 990 (1003)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~--~p~~RPs~~ev~~~ 990 (1003)
+....+....... ........+...+.+++.+|+.. ++..|+++.|+++|
T Consensus 215 ---~~~~~i~~~~~~~---~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 215 ---ETYGKIMNHKERF---QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ---HHHHHHhCCCccc---cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0011111100000 00111122344566677776644 44447899999887
No 234
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-34 Score=309.04 Aligned_cols=255 Identities=23% Similarity=0.310 Sum_probs=196.4
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEec--cccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVIN--LKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 777 (1003)
....|++.++||+||.+.||++...+. +.||+|++. ..+.+....|.+|+..+.++ .|.+||++++| ..++
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DY-----Ev~d 432 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDY-----EVTD 432 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeee-----eccC
Confidence 456899999999999999999998644 567777664 33455678899999999999 59999999999 5668
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
++.|+||||=+. +|..++++.. ...+...++.+..|++.|+.++|.+ ||||.|+||.|+|+ -.|.+||+||
T Consensus 433 ~~lYmvmE~Gd~-DL~kiL~k~~----~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDF 503 (677)
T KOG0596|consen 433 GYLYMVMECGDI-DLNKILKKKK----SIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDF 503 (677)
T ss_pred ceEEEEeecccc-cHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeee
Confidence 999999998654 9999999854 2344347889999999999999999 99999999999999 5789999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCC-----------CCCccccchhHHHHHHHHHhCCCCCCcccCCcc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-----------NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGL 926 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~ 926 (1003)
|+|..+.... ++-....-+||+.||+||++... ++++++||||+|||+|+|+.|+.||+...+..
T Consensus 504 GIA~aI~~DT---TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~- 579 (677)
T KOG0596|consen 504 GIANAIQPDT---TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI- 579 (677)
T ss_pred chhcccCccc---cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH-
Confidence 9998765432 23333456899999999987543 35688999999999999999999997643210
Q ss_pred hhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 927 TLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+..+.++.-.. +.+...+ ..++..+|..|+..||.+||+..|++++
T Consensus 580 -----------aKl~aI~~P~~~I----efp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 580 -----------AKLHAITDPNHEI----EFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred -----------HHHHhhcCCCccc----cccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 1112222211111 1111111 1228899999999999999999999975
No 235
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1e-33 Score=309.96 Aligned_cols=274 Identities=27% Similarity=0.399 Sum_probs=208.3
Q ss_pred ccCCccCeeeeccceEEEEEEECC----CCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGE----DLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.+|++.+.||+|+||.||+|++.. +++.||+|+++..... ..+.|.+|+++++.+.|||++++++++.. .+.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 467788999999999999999753 4788999999755443 46789999999999999999999998632 335
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++++||
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 153 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDF 153 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccc
Confidence 67899999999999999998642 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh-hC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM-AL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~-~~ 936 (1003)
|.+......... ........++..|+|||...+..++.++||||+|+++|||++|+.|+................ ..
T Consensus 154 g~~~~~~~~~~~--~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd05038 154 GLAKVLPEDKDY--YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMI 231 (284)
T ss_pred ccccccccCCcc--eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccccccc
Confidence 999876422111 111112335667999999988899999999999999999999999976533221110000000 00
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
...+.+.+.... +.+....+..++.+++.+||+.+|++||++.|+++.|+++
T Consensus 232 ~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 232 VTRLLELLKEGE------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHHcCC------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111112222111 1111223446789999999999999999999999999875
No 236
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.2e-33 Score=304.40 Aligned_cols=251 Identities=20% Similarity=0.246 Sum_probs=203.6
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|+||.||++....+++.||+|.+... .....+.+.+|++++++++||||+++++++ ...+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 488899999999999999999989999999998643 233456889999999999999999999984 5567889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.
T Consensus 76 lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~ 149 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQR---GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIAR 149 (256)
T ss_pred EEEecCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeecccee
Confidence 9999999999999997643 33578999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......|++.|+|||+..+..++.++||||+||++|+|++|+.||..... .
T Consensus 150 ~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----------------~ 207 (256)
T cd08218 150 VLNSTV-----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----------------K 207 (256)
T ss_pred ecCcch-----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----------------H
Confidence 653221 111234588899999999988899999999999999999999999864211 1
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.+........ ..........+.+++.+||+.+|++||++.|++++
T Consensus 208 ~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 208 NLVLKIIRGSY---PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHHHhcCCC---CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11111111111 11122345678899999999999999999999975
No 237
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=316.05 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=209.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
+.|.++..||.|+||.||+|..+.++...|.|++........++|+-|++|+....||+||++++.| ..++..++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ay-----y~enkLwi 106 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAY-----YFENKLWI 106 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHH-----hccCceEE
Confidence 4577788999999999999999988888899999888888889999999999999999999999874 44677899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
..|||.||..+..+-.- +..+.+.++..+++|++.|+.|||++ .|||||+|+.|||++.+|.++++|||.+..
T Consensus 107 liEFC~GGAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EEeecCCchHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccccccc
Confidence 99999999999887653 56799999999999999999999999 999999999999999999999999999854
Q ss_pred cccCCccccCcccccccccccccCcccc-----CCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYG-----MGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
.. .+......+.||+.|||||+. +..+|+.++||||||+++.||..+.+|.+...
T Consensus 180 n~-----~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln--------------- 239 (1187)
T KOG0579|consen 180 NK-----STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN--------------- 239 (1187)
T ss_pred ch-----hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc---------------
Confidence 31 222233458899999999975 45689999999999999999999999966431
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...++-+....+|. ....+......|.++..+|+..+|..||+++++++|
T Consensus 240 --pMRVllKiaKSePP-TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 240 --PMRVLLKIAKSEPP-TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred --hHHHHHHHhhcCCC-cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 11222222223332 122234456788999999999999999999999986
No 238
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.5e-33 Score=311.92 Aligned_cols=203 Identities=24% Similarity=0.330 Sum_probs=163.8
Q ss_pred cCeeeeccceEEEEEEEC--CCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 708 SNLIGQGSFGFVYRGNLG--EDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
.++||+|+||+||+|++. .+++.||+|.+.... ....+.+|++++++++||||+++++++.. ..+...++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 468999999999999975 366889999986432 23567899999999999999999988642 33556789999
Q ss_pred cccCCCHHHHHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEe----CCCCCeEEccc
Q 001858 786 YMQSGSLEDWLQQSNDQ----VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSDF 857 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill----~~~~~~kl~Df 857 (1003)
|+++ +|.+++...... ....+++..++.++.|++.|++|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9965 898888654321 123589999999999999999999999 99999999999999 45678999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
|+++....... .........||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 157 G~a~~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLK--PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCc--cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99986543211 11122345789999999998764 5889999999999999999999999754
No 239
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-33 Score=307.24 Aligned_cols=259 Identities=23% Similarity=0.376 Sum_probs=204.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCC---CceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGED---LLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
..+|.+.+.||+|+||.||+|.+... ...||||...... ....+.+.+|++++++++|||++++++++. .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~------~ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT------E 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc------C
Confidence 35688899999999999999987543 3569999887544 334568999999999999999999999853 2
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccC
Confidence 34689999999999999997642 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|+++......... .....++..|+|||.+....++.++||||+|+++|||++ |+.||......+.
T Consensus 152 g~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---------- 217 (270)
T cd05056 152 GLSRYLEDESYYK----ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV---------- 217 (270)
T ss_pred ceeeeccccccee----cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH----------
Confidence 9997654322111 112335678999999888889999999999999999996 9999875432110
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
...+..... ....+.++..+.+++.+|+.++|++||++.++++.|++++..
T Consensus 218 ----~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 218 ----IGRIENGER------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----HHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011111110 011123456788999999999999999999999999987754
No 240
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=7e-34 Score=311.21 Aligned_cols=269 Identities=21% Similarity=0.322 Sum_probs=198.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|+||.||+|++..+++.||+|.++... ......+.+|++++++++|||+++++++ +.+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~-----~~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV-----LHSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHH-----hccCCceE
Confidence 4788899999999999999999999999999986432 2234567889999999999999999998 45677889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++ +|.+++... .+.+++.+++.++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 76 lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 76 LVFEYCDQ-DLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred EEEecCCC-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhh
Confidence 99999975 888887653 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC--ch
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL--PE 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~--~~ 938 (1003)
...... .......++..|+|||++.+. .++.++||||+||++|||++|+.|+.........+........ ++
T Consensus 148 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07839 148 AFGIPV-----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 222 (284)
T ss_pred ccCCCC-----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCCh
Confidence 543211 111234578899999987765 4689999999999999999999986433222111111111000 00
Q ss_pred h-HHHHH---HhhcccCCCCc---hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 K-VMEIV---DFALLLDPGNE---RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~-~~~~i---~~~l~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
. +.... +.......... ..........+.+++.+|++.+|++|||++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 223 ESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred HHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0 00000 00000000000 01112245677899999999999999999999875
No 241
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-33 Score=318.55 Aligned_cols=265 Identities=19% Similarity=0.249 Sum_probs=194.3
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
...+|++.+.||+|+||.||+|++..+++.||+|+... .....|+.++++++||||+++++++. .....
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 132 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLV-----SGAIT 132 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEE-----eCCee
Confidence 34579999999999999999999998899999997542 22356999999999999999999853 45667
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++|+|++. ++|.+++... ...+++.+++.++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 204 (357)
T PHA03209 133 CMVLPHYS-SDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAA 204 (357)
T ss_pred EEEEEccC-CcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccc
Confidence 99999995 5899888763 35689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCC-CCcccCCcchh--------hHH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRP-THTMFNDGLTL--------HGF 931 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P-~~~~~~~~~~~--------~~~ 931 (1003)
+..... .......||..|+|||++.+..++.++||||+||++|||+++..| |.......... ...
T Consensus 205 ~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~ 278 (357)
T PHA03209 205 QFPVVA------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKI 278 (357)
T ss_pred cccccC------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHH
Confidence 753211 112235689999999999999999999999999999999985554 44322211100 000
Q ss_pred HHh------hCc-----hhHHHHHHh-hcccCCCCchhhH--HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 932 VKM------ALP-----EKVMEIVDF-ALLLDPGNERAKI--EECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 932 ~~~------~~~-----~~~~~~i~~-~l~~~~~~~~~~~--~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
... ..+ ......++. .....+..+.... .........++.+|++.+|++|||+.|+++|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 279 ISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 000 000 000111110 0011111111111 1223445678999999999999999999976
No 242
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1e-33 Score=310.32 Aligned_cols=262 Identities=24% Similarity=0.422 Sum_probs=202.2
Q ss_pred HhccCCccCeeeeccceEEEEEEECC-----CCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeeccc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 774 (1003)
..++|++.++||+|+||.||+|.++. .+..||+|.+..... .....+.+|+.++++++||||+++++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~----- 78 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV----- 78 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 46789999999999999999997642 345799998864332 2235688899999999999999999985
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQ-----VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 849 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~ 849 (1003)
.+....++||||+++|+|.+++...... ......+..+..++.|++.|++|||++ +|+||||||+||+++.+
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 3456779999999999999999764321 123456788899999999999999999 99999999999999999
Q ss_pred CCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchh
Q 001858 850 MVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTL 928 (1003)
Q Consensus 850 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~ 928 (1003)
+.++++|||+++.......... .....++..|+|||.+.++.++.++||||+||++|||++ |..||......
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~---- 228 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---- 228 (288)
T ss_pred CcEEECcCCccccccccccccc---cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 9999999999976533221111 112345778999999998899999999999999999999 78888643211
Q ss_pred hHHHHhhCchhHHHHH-HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 929 HGFVKMALPEKVMEIV-DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 929 ~~~~~~~~~~~~~~~i-~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
+..+.+ +...... .+.+...+.+++.+|++.+|++||++.|+++.++..
T Consensus 229 ----------~~~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 229 ----------QVLKFVMDGGYLDQ-------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred ----------HHHHHHHcCCCCCC-------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 111111 1111111 112345789999999999999999999999988763
No 243
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.7e-33 Score=306.86 Aligned_cols=249 Identities=25% Similarity=0.353 Sum_probs=203.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..|+..+.||.|+||.||+|.+..++..||+|++.... ....+.+.+|++++++++|||++++++++ .++...+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCEEE
Confidence 45778899999999999999998889999999987443 34457899999999999999999999985 4466789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.. +.+++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++.
T Consensus 79 lv~e~~~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~ 149 (277)
T cd06640 79 IIMEYLGGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEecCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccce
Confidence 99999999999999864 3578899999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......++..|+|||++.+..++.++||||+||++|||++|+.||....... ..
T Consensus 150 ~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------------~~ 210 (277)
T cd06640 150 QLTDTQ-----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--------------VL 210 (277)
T ss_pred eccCCc-----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--------------Hh
Confidence 653321 11223457889999999988889999999999999999999999987543210 00
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+. ...+ ......+...+.+++.+||+.+|++||+++|++++
T Consensus 211 ~~~~---~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 211 FLIP---KNNP---PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhh---cCCC---CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1111 0111 11223456678899999999999999999999887
No 244
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.4e-33 Score=301.98 Aligned_cols=250 Identities=33% Similarity=0.481 Sum_probs=203.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.+.||+|+||.||+|... ++.||+|.++.... ..+++.+|+.++++++|+|++++++++ .+....+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVV-----LQGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEE-----cCCCCeE
Confidence 467899999999999999999875 67899999975544 467899999999999999999999985 3467789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.++++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 77 ~v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~ 150 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRG---RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAK 150 (256)
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccc
Confidence 9999999999999998643 23689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
....... ...++..|+|||++.++.++.++||||+|+++|||++ |+.||...... ..
T Consensus 151 ~~~~~~~--------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------------~~ 208 (256)
T cd05039 151 EASQGQD--------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------------DV 208 (256)
T ss_pred ccccccc--------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--------------HH
Confidence 6522111 1234678999999988889999999999999999997 99998643211 11
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+.+...... ......+..+.+++.+|+..+|++||++.|+++.|+.
T Consensus 209 ~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 209 VPHVEKGYRM------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHHHhcCCCC------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1111111110 1112235678899999999999999999999999865
No 245
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-33 Score=304.44 Aligned_cols=251 Identities=26% Similarity=0.418 Sum_probs=198.9
Q ss_pred CeeeeccceEEEEEEECC-CC--ceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGE-DL--LPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
++||+|++|.||+|.+.. .+ ..||+|.++.... ...+.+.+|++++++++||||+++++++ .+ ...++|+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVV-----LT-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEE-----cC-CeEEEEE
Confidence 468999999999999865 33 3699999986555 5567899999999999999999999985 23 6779999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||++..+.
T Consensus 75 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~ 148 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALP 148 (257)
T ss_pred EecCCCcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccc
Confidence 99999999999987431 4689999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
..... ........++..|+|||++.+..++.++||||+||++|||++ |+.||...... +..+.
T Consensus 149 ~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------------~~~~~ 212 (257)
T cd05040 149 QNEDH--YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--------------QILKK 212 (257)
T ss_pred ccccc--eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------------HHHHH
Confidence 32211 111113457789999999988899999999999999999998 99998643211 11111
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+.... .........+..+.+++.+|++.+|++||+++|+++.|.
T Consensus 213 ~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 213 IDKEG-----ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHhcC-----CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11100 001111234567889999999999999999999999875
No 246
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.2e-33 Score=306.82 Aligned_cols=253 Identities=28% Similarity=0.408 Sum_probs=195.7
Q ss_pred CeeeeccceEEEEEEECCCCc--eEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLL--PVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||.||+|++.+++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++. ..+..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-----cCCCceEEE
Confidence 468999999999999987765 46888876332 33456788999999999 8999999999853 456679999
Q ss_pred ecccCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeE
Q 001858 785 DYMQSGSLEDWLQQSNDQ-----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 853 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~k 853 (1003)
||+++|+|.+++...... ....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999764321 123578999999999999999999998 999999999999999999999
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHH
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFV 932 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~ 932 (1003)
++|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 153 l~dfgl~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-------- 218 (270)
T cd05047 153 IADFGLSRGQEVY------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------- 218 (270)
T ss_pred ECCCCCccccchh------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--------
Confidence 9999998532110 11111234667999999988889999999999999999997 99998653211
Q ss_pred HhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 933 KMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
.....+...... .....+...+.+++.+||+.+|.+||++.|+++.|..+.
T Consensus 219 ------~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 219 ------ELYEKLPQGYRL------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ------HHHHHHhCCCCC------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111111111100 111123456889999999999999999999999998764
No 247
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.8e-34 Score=311.13 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=201.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc-cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK-QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|.++.. .......+.+|++++++++||||+++++++ ..++..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF-----FIEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe-----ecCCeEE
Confidence 3688999999999999999999989999999988743 233356889999999999999999999984 4467889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++..... ...+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+|++|||++.
T Consensus 76 lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 151 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSG 151 (286)
T ss_pred EEEeecCCCCHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcc
Confidence 99999999999999876321 346899999999999999999999632 89999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCC------CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN------VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
.+.... .....++..|+|||.+.+.. ++.++|+||+||++|+|++|+.||......
T Consensus 152 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----------- 213 (286)
T cd06622 152 NLVASL-------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA----------- 213 (286)
T ss_pred cccCCc-------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----------
Confidence 553211 12245788999999875543 478999999999999999999998643211
Q ss_pred CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 936 LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.....+.......+.. ....+...+..++.+|++.+|++||++++++.+-
T Consensus 214 ---~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 214 ---NIFAQLSAIVDGDPPT---LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP 263 (286)
T ss_pred ---hHHHHHHHHhhcCCCC---CCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence 1111111111111111 1223566788999999999999999999999863
No 248
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.6e-34 Score=325.57 Aligned_cols=267 Identities=22% Similarity=0.242 Sum_probs=198.8
Q ss_pred hccCCccCeeeeccceEEEEEEECC--CCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE--DLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
..+|++.+.||+|+||.||+|...+ .++.||+|.+... +.+.+|++++++++||||+++++++ .....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY-----RWKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE-----eeCCE
Confidence 4579999999999999999998643 4578999987532 3456899999999999999999884 44667
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|||++. ++|.+++.. .+.+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.++|+|||+
T Consensus 161 ~~lv~e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~ 231 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGA 231 (392)
T ss_pred EEEEehhcC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcc
Confidence 899999996 589998854 45789999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCc--chhhHHHHhh--
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDG--LTLHGFVKMA-- 935 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~--~~~~~~~~~~-- 935 (1003)
++....... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ..+....+..
T Consensus 232 a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~ 308 (392)
T PHA03207 232 ACKLDAHPD---TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQV 308 (392)
T ss_pred ccccCcccc---cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhcc
Confidence 976543221 112224679999999999999999999999999999999999999997643321 1111111100
Q ss_pred ----Cch----hHHHHHHhhc-ccCCCCchhh---HHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 ----LPE----KVMEIVDFAL-LLDPGNERAK---IEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ----~~~----~~~~~i~~~l-~~~~~~~~~~---~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+. .......... ...+....+. .......+..++.+|+..+|++||++.|++.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 309 HPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 0111111110 0111000000 01123467788999999999999999999986
No 249
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.2e-33 Score=303.17 Aligned_cols=256 Identities=30% Similarity=0.519 Sum_probs=203.6
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
..++|++.++||+|+||.||+|.+. +++.||||.+.... ...+++.+|++++++++|||++++++++ ......
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEEPI 76 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCCce
Confidence 3468999999999999999999986 45779999987433 3457899999999999999999999984 445678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+++++|.+++.... ...+++.++..++.+++.|++|||+. +++|+||||+||+++.++.+|++|||.+
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred EEEEeccCCCCHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccc
Confidence 99999999999999997643 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchh
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
......... ......++..|+|||...+..++.++||||+|+++|||++ |+.||...... .
T Consensus 151 ~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------------~ 212 (261)
T cd05034 151 RLIEDDEYT----AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--------------E 212 (261)
T ss_pred eeccchhhh----hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------------H
Confidence 765432111 1112334678999999998889999999999999999998 99998653211 1
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
..+.+...... + .....+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 213 ~~~~~~~~~~~-~-----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 213 VLEQVERGYRM-P-----RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHcCCCC-C-----CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11111111100 0 011224568899999999999999999999998864
No 250
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.3e-33 Score=304.35 Aligned_cols=257 Identities=20% Similarity=0.307 Sum_probs=190.1
Q ss_pred CeeeeccceEEEEEEECC--CCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGE--DLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
+.||+|+||.||+|.+.. ++..+|+|.++.... .....+.+|+.++++++||||+++++++ .+....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQC-----TEVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----cCCCCcEEEEE
Confidence 368999999999998643 456799998864432 2345788999999999999999999985 34566799999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
|+++|+|.+++...........++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccC
Confidence 99999999999875433234567788889999999999999999 999999999999999999999999999975432
Q ss_pred CCccccCcccccccccccccCccccCCC-------CCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCc
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMGG-------NVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
.... .......++..|+|||+..+. .++.++||||+|+++|||++ |+.||......+.
T Consensus 153 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~----------- 218 (269)
T cd05087 153 EDYY---VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV----------- 218 (269)
T ss_pred ccee---ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-----------
Confidence 2111 111234578899999987542 35789999999999999996 9999965432111
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
....+.......+.. .........+.+++..|| .+|++||+++||++.|+
T Consensus 219 --~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 219 --LTYTVREQQLKLPKP--RLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred --HHHHhhcccCCCCCC--ccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 000111111111100 000112345778889999 58999999999998764
No 251
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.2e-33 Score=315.60 Aligned_cols=272 Identities=19% Similarity=0.205 Sum_probs=198.0
Q ss_pred ccCeeeec--cceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 707 LSNLIGQG--SFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 707 ~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
+.++||+| +|++||+++++.+++.||+|+++... ....+.+.+|+++++.++||||+++++++. .++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 46789999 68899999999999999999997543 233456788999999999999999999853 4567899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++|+|.+++..+. ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++++||+.+..
T Consensus 77 v~e~~~~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~ 150 (327)
T cd08227 77 VTSFMAYGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 150 (327)
T ss_pred EEeccCCCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhc
Confidence 999999999999997643 34589999999999999999999999 999999999999999999999999987654
Q ss_pred cccCCc--cccCcccccccccccccCccccCC--CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 863 LFDRPI--QETSSSSIGIKGTVGYVAPEYGMG--GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 863 ~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
...... ...........++..|+|||++.+ ..++.++||||+||++|||++|+.||.......... .......+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~ 229 (327)
T cd08227 151 MINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPC 229 (327)
T ss_pred cccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHhcCCccc
Confidence 322111 001111122356788999999876 458899999999999999999999997643221111 111111100
Q ss_pred h-------HHHHHHhh--------c----c---cCC----CCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 K-------VMEIVDFA--------L----L---LDP----GNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~-------~~~~i~~~--------l----~---~~~----~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
. ..+..... . . ..+ ....+........+.+++.+|++.+|++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 230 LLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0 00000000 0 0 000 00011122345678899999999999999999999975
No 252
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.3e-34 Score=313.67 Aligned_cols=269 Identities=21% Similarity=0.309 Sum_probs=201.0
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||+|+||.||+|++..+++.||+|.++... ......+.+|++++++++||||+++++++ ..++..+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCCeEE
Confidence 57899999999999999999999889999999987443 33345778999999999999999999984 4567789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++ +|.+++... ...+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 81 lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 152 (301)
T cd07873 81 LVFEYLDK-DLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLAR 152 (301)
T ss_pred EEEecccc-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchh
Confidence 99999974 999988764 34688999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH---hhCc
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK---MALP 937 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~---~~~~ 937 (1003)
...... .......+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+. ...... ....
T Consensus 153 ~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~-~~~~~~~~~~~~~ 226 (301)
T cd07873 153 AKSIPT-----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ-LHFIFRILGTPTE 226 (301)
T ss_pred ccCCCC-----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCCh
Confidence 542211 111223578899999987654 578899999999999999999999975432211 110000 0011
Q ss_pred hhHHHHHHhhcc---cCCCCc----hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALL---LDPGNE----RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~---~~~~~~----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+......... ..+... ......+...+.+++.+|++.+|.+|||++|++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 227 ETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred hhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111111110000 001000 01112234567899999999999999999999974
No 253
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.3e-33 Score=307.38 Aligned_cols=262 Identities=22% Similarity=0.322 Sum_probs=206.1
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeeccc-CCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDF-KGDD 778 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~~~ 778 (1003)
++++|++.+.||+|++|.||+|.+..+++.||+|++..... ..+.+.+|+++++++ .||||+++++++..... ....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 46899999999999999999999988889999999874433 346789999999999 79999999999755332 3456
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||+++++|.++++..... ...+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKK-GKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 689999999999999998764321 35789999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCC-----CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-----GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~ 933 (1003)
++....... .......|+..|+|||++.. ..++.++||||+||++|+|++|+.||.......
T Consensus 159 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------- 225 (275)
T cd06608 159 VSAQLDSTL-----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-------- 225 (275)
T ss_pred cceecccch-----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--------
Confidence 997653221 11223458899999998653 346788999999999999999999986432110
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
....... .+.............+.+++.+|+..+|++||++.|++++
T Consensus 226 -----~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 226 -----ALFKIPR-----NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred -----HHHHhhc-----cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0111110 1111111122345678899999999999999999999874
No 254
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-33 Score=322.87 Aligned_cols=267 Identities=22% Similarity=0.248 Sum_probs=197.6
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++||||+++++++. .++..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~-----~~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRV-----VGGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEEE
Confidence 457999999999999999999999999999999642 234678999999999999999999853 356779
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|||++. ++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 237 lv~e~~~-~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~ 308 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGAR----LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAAC 308 (461)
T ss_pred EEEEccC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCce
Confidence 9999995 6999988753 24689999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCC-c-----chhhHHHHhh
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFND-G-----LTLHGFVKMA 935 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~-~-----~~~~~~~~~~ 935 (1003)
....... ........||..|+|||++.+..++.++|||||||++|||++|..|+-..... . ..+...+...
T Consensus 309 ~~~~~~~---~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~ 385 (461)
T PHA03211 309 FARGSWS---TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQA 385 (461)
T ss_pred ecccccc---cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhh
Confidence 6533211 11122356999999999999999999999999999999999988764322111 0 0111111100
Q ss_pred ------Cc----hhHHHHHHhhc--ccCCCCchhhH---HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 ------LP----EKVMEIVDFAL--LLDPGNERAKI---EECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ------~~----~~~~~~i~~~l--~~~~~~~~~~~---~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+ ..+........ ...+....... ......+.+++.+|++.||++|||++|++++
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 386 QVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred ccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 00111010000 00111111111 1223467889999999999999999999986
No 255
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-33 Score=306.74 Aligned_cols=250 Identities=26% Similarity=0.348 Sum_probs=203.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||.|+||.||+|++..+++.||+|++.... ......+.+|+++++.++|||++++.+++ .++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSF-----LKGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEE-----EECCeEE
Confidence 36888999999999999999999899999999987543 34456789999999999999999999985 3457889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++... .+++.+++.++.|++.|++|||+. +++||||+|+||+++.++.++++|||.++
T Consensus 76 ~v~e~~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 146 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSG 146 (274)
T ss_pred EEEEeeCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccce
Confidence 999999999999999752 688999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......++..|+|||+..+..++.++||||+|+++|+|++|+.||...... ...
T Consensus 147 ~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------------~~~ 207 (274)
T cd06609 147 QLTSTM-----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--------------RVL 207 (274)
T ss_pred eecccc-----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--------------HHH
Confidence 764321 1122356888999999999888999999999999999999999998653211 111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+..... +.... ......+.+++.+|+..+|++||++++++++
T Consensus 208 ~~~~~~~~--~~~~~---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 208 FLIPKNNP--PSLEG---NKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHhhhcCC--CCCcc---cccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11111111 10000 0134567889999999999999999999875
No 256
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-33 Score=316.78 Aligned_cols=276 Identities=20% Similarity=0.264 Sum_probs=206.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++++++||||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999999999999999986432 3345678899999999999999999998766555556678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++|+||+++ ++.+++.. ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~~-~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 84 YIVQELMET-DLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred EEEehhccc-CHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 999999975 88888754 4689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH---hhC
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK---MAL 936 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~---~~~ 936 (1003)
......... ........|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||....... ....... ...
T Consensus 154 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~~~~~~~~~ 230 (336)
T cd07849 154 RIADPEHDH--TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLILGVLGTPS 230 (336)
T ss_pred eeccccccc--cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCC
Confidence 765332211 112233568999999998654 568899999999999999999999996532111 0100000 001
Q ss_pred chhHHHHHHhh----cccCCCCch----hhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKVMEIVDFA----LLLDPGNER----AKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~~~~i~~~----l~~~~~~~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
++.+....... ....+.... .........+.+++.+||+.+|++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111111110 000010111 0112235678899999999999999999999987
No 257
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.4e-33 Score=306.03 Aligned_cols=256 Identities=20% Similarity=0.293 Sum_probs=188.9
Q ss_pred CeeeeccceEEEEEEECC--CCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGE--DLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
+.||+|+||+||+|.... ....+|+|.+..... .....|.+|++.++.++||||+++++.+ ......++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~-----~~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQC-----IESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEE-----CCCCceEEEEE
Confidence 368999999999997532 345788888764332 2345788999999999999999999985 34567899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
|+++|+|.+++...........++..+..++.|++.|++|||++ +|+||||||+||+++.++.+|++|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccccc
Confidence 99999999999876543334567888899999999999999999 999999999999999999999999999865432
Q ss_pred CCccccCcccccccccccccCccccC-------CCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCc
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGM-------GGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
..... ......++..|+|||+.. ...++.++||||+||++|||++ |..||......+
T Consensus 153 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------------ 217 (269)
T cd05042 153 EDYYI---TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ------------ 217 (269)
T ss_pred chhee---ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH------------
Confidence 21111 112234677899999864 3456789999999999999999 788886532110
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.....+.......+ ...........+..++..|| .+|++||+++||.+.+
T Consensus 218 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 218 -VLKQVVREQDIKLP--KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred -HHHHHhhccCccCC--CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 01111111111111 11111234456677888898 4999999999999876
No 258
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.2e-33 Score=304.28 Aligned_cols=260 Identities=27% Similarity=0.382 Sum_probs=206.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||.|+||+||+|....++..+|+|++.... ....+.+.+|++.++.++|+|++++++.+ ..+...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF-----VVGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEE-----eeCCEEE
Confidence 46899999999999999999998889999999986433 23567899999999999999999999874 4467789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+|++++++|.++++.... ...+++..++.++.|++.|++|||+. +++||||+|+||++++++.++++|||++.
T Consensus 76 iv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~ 150 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSA 150 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHH
Confidence 99999999999999986432 24689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
.+....... ........|+..|+|||++... .++.++||||+||++|||++|+.||........ .
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-------------~ 216 (267)
T cd06610 151 SLADGGDRT-RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-------------L 216 (267)
T ss_pred HhccCcccc-ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-------------H
Confidence 765432111 0122335689999999998776 788999999999999999999999975432110 1
Q ss_pred HHHHHhhcccCCCCchh--hHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERA--KIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~--~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+... ..+..... ........+.+++.+|+..+|++||+++|++++
T Consensus 217 ~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 217 MLTLQ----NDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHhc----CCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11111 11111111 112445678899999999999999999999875
No 259
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.5e-33 Score=303.45 Aligned_cols=255 Identities=22% Similarity=0.290 Sum_probs=198.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-----ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-----KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.+|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD---PME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc---CCC
Confidence 57899999999999999999999899999999886322 1234678899999999999999999997532 223
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++++|.+++.. ...+++..+.+++.|++.|++|||+. +++|+||||+||+++.++.++|+||
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Df 150 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKS-----YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDF 150 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcC
Confidence 567899999999999999986 34578889999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
|+++........ ........|+..|+|||+..+..++.++|||||||++|||++|+.||......
T Consensus 151 g~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------------- 215 (265)
T cd06652 151 GASKRLQTICLS--GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM------------- 215 (265)
T ss_pred cccccccccccc--ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-------------
Confidence 999765321111 11122345889999999998888999999999999999999999998643111
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
........... ...........+..++.+|+. +|++||+++|++++
T Consensus 216 ---~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 216 ---AAIFKIATQPT---NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ---HHHHHHhcCCC---CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 11111011100 111122334566777888884 89999999999875
No 260
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-33 Score=307.55 Aligned_cols=266 Identities=23% Similarity=0.273 Sum_probs=204.8
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|+..+.||.|++|.||+|.+..+++.||+|.+..... .....+.+|++++++++||||+++++++.. ......+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEE
Confidence 367888999999999999999988899999999874433 345678999999999999999999998643 2345679
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++..... ....+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++++|||++.
T Consensus 78 lv~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 153 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSG 153 (287)
T ss_pred EEEEecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccc
Confidence 99999999999998865332 145688999999999999999999999 99999999999999999999999999987
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .....++..|+|||...+..++.++||||+||++|+|++|+.||.......... .+..
T Consensus 154 ~~~~~~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---------~~~~ 217 (287)
T cd06621 154 ELVNSL-------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGP---------IELL 217 (287)
T ss_pred cccccc-------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCCh---------HHHH
Confidence 543211 112457889999999998899999999999999999999999997542210110 0111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
..+.....................+.+++.+||+.+|++||++.|++++-
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 218 SYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred HHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 11111000000000010012345688999999999999999999999854
No 261
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.6e-34 Score=319.32 Aligned_cols=242 Identities=26% Similarity=0.317 Sum_probs=187.5
Q ss_pred eeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhc---CCCCceeEeeeeeecccCCCCceEEee
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNI---RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
||+|+||+||+|++..+++.||+|++.... ......+..|..++... +||+|+++++++ .+....++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 699999999999999999999999986432 22334556677777665 699999999884 5567789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++|+|.+++.. .+.+++.+++.++.||++|++|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 76 e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~ 147 (330)
T cd05586 76 DYMSGGELFWHLQK-----EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANL 147 (330)
T ss_pred cCCCCChHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCC
Confidence 99999999999976 45689999999999999999999999 99999999999999999999999999997532
Q ss_pred cCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
... .......||..|+|||++.+. .++.++||||+||++|||++|+.||..... .+....
T Consensus 148 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--------------~~~~~~ 208 (330)
T cd05586 148 TDN-----KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--------------QQMYRN 208 (330)
T ss_pred CCC-----CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--------------HHHHHH
Confidence 211 112245699999999998764 478999999999999999999999865321 111111
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC----CHHHHHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI----HMADAVKN 990 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP----s~~ev~~~ 990 (1003)
+......-+. ......+.+++.+|++.+|.+|| ++.|+++|
T Consensus 209 i~~~~~~~~~------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 209 IAFGKVRFPK------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HHcCCCCCCC------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 1111111110 11345667889999999999998 56777664
No 262
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.3e-33 Score=301.55 Aligned_cols=240 Identities=20% Similarity=0.385 Sum_probs=187.1
Q ss_pred CeeeeccceEEEEEEECCC------------CceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 709 NLIGQGSFGFVYRGNLGED------------LLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
+.||+|+||.||+|+.... ...||+|.+..........|.+|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-----~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV-----R 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----c
Confidence 4689999999999986422 2358999887655555678899999999999999999999863 3
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCC-----
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV----- 851 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~----- 851 (1003)
+...++||||+++|+|..++... ...+++.++++++.|+++|++|||+. +|+||||||+||+++.++.
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~ 148 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRK----SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECG 148 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCC
Confidence 55678999999999999988753 34689999999999999999999999 9999999999999987664
Q ss_pred --eEEcccccccccccCCccccCcccccccccccccCccccC-CCCCCccccchhHHHHHHHHH-hCCCCCCcccCCcch
Q 001858 852 --AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM-GGNVSLTGDVYSFGILLLEMF-TGRRPTHTMFNDGLT 927 (1003)
Q Consensus 852 --~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~ell-~g~~P~~~~~~~~~~ 927 (1003)
++++|||++...... ....++..|+|||.+. +..++.++||||+||++|||+ .|+.||......
T Consensus 149 ~~~~l~d~g~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--- 216 (262)
T cd05077 149 PFIKLSDPGIPITVLSR---------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA--- 216 (262)
T ss_pred ceeEeCCCCCCccccCc---------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh---
Confidence 899999998654211 1245788999999876 466889999999999999998 488887543211
Q ss_pred hhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 928 LHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 928 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
+........... .. .....+.+++.+||+.+|++||++.++++++
T Consensus 217 -----------~~~~~~~~~~~~----~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 217 -----------EKERFYEGQCML----VT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred -----------HHHHHHhcCccC----CC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 011111111100 01 1134678899999999999999999999876
No 263
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-33 Score=313.40 Aligned_cols=264 Identities=26% Similarity=0.425 Sum_probs=204.8
Q ss_pred hccCCccCeeeeccceEEEEEEECC-------CCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeec
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE-------DLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSI 772 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 772 (1003)
..+|++.+.||+|+||.||+|.+.. ....||+|+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--- 87 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 87 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE---
Confidence 3578999999999999999998642 22368999887432 23357889999999999 899999999985
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCC
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSND-----------QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKP 841 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp 841 (1003)
..++..++++||+++|+|.+++..... .....+++.++..++.|++.|++|||+. +++||||||
T Consensus 88 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 162 (334)
T cd05100 88 --TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA 162 (334)
T ss_pred --ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence 345678999999999999999986432 1134588999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCc
Q 001858 842 SNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHT 920 (1003)
Q Consensus 842 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~ 920 (1003)
+||+++.++.+||+|||+++........ .......++..|+|||++.+..++.++||||+|+++|||++ |..||..
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYY---KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred ceEEEcCCCcEEECCcccceeccccccc---ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999765332111 11111234568999999999999999999999999999998 8888865
Q ss_pred ccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHh
Q 001858 921 MFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAARE 996 (1003)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~ 996 (1003)
... ++....+...... .....+...+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 240 ~~~--------------~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 240 IPV--------------EELFKLLKEGHRM------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred CCH--------------HHHHHHHHcCCCC------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 321 1111111111111 1112334578899999999999999999999999998773
No 264
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.8e-33 Score=304.42 Aligned_cols=261 Identities=24% Similarity=0.402 Sum_probs=205.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCc----eEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLL----PVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
..+|++.+.||+|+||+||+|.+..++. .||+|....... .....+.+|++++++++|||++++++++..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 3678899999999999999999866554 589998864432 335678899999999999999999998642
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
...++|+||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNH----KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECC
Confidence 5678999999999999999864 23589999999999999999999998 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhh
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
||.++........ .......++..|+|||......++.++|+||+|+++||+++ |+.||.....
T Consensus 153 fg~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------------ 217 (279)
T cd05057 153 FGLAKLLDVDEKE---YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA------------ 217 (279)
T ss_pred CcccccccCcccc---eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH------------
Confidence 9999865422111 11111224578999999888889999999999999999998 9999865321
Q ss_pred CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhh
Q 001858 936 LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKY 998 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~ 998 (1003)
+++...+...... +.. ..+...+..++.+||..+|++||++.++++.|..+.+..
T Consensus 218 --~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 218 --VEIPDLLEKGERL-PQP-----PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred --HHHHHHHhCCCCC-CCC-----CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 1122222211111 100 112345788899999999999999999999999876543
No 265
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.7e-33 Score=308.54 Aligned_cols=269 Identities=22% Similarity=0.303 Sum_probs=202.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++|||++++++++ ......
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVF-----RRKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEE-----eeCCEE
Confidence 46889999999999999999999889999999986432 22345688999999999999999999985 446678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||++++++..++.. ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||++
T Consensus 76 ~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (286)
T cd07847 76 HLVFEYCDHTVLNELEKN-----PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFA 147 (286)
T ss_pred EEEEeccCccHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccc
Confidence 999999999888887654 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhh--HHHHhhCc
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLH--GFVKMALP 937 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~--~~~~~~~~ 937 (1003)
........ ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.+....+.... .......+
T Consensus 148 ~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07847 148 RILTGPGD-----DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIP 222 (286)
T ss_pred eecCCCcc-----cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 86533211 1123457889999998766 4578899999999999999999999976433211110 00000011
Q ss_pred hhHHHHHH------hhcccCCCCch---hhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVD------FALLLDPGNER---AKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~------~~l~~~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...+..+ ......+.... .........+.+++.+||+++|++||++.|++.+
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 223 -RHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred -HHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 1111100 00011111110 1112335678899999999999999999999865
No 266
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.5e-33 Score=303.44 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=204.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++|||++++++++.. ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 4788899999999999999999899999999986432 2335678899999999999999999987532 3355678
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLH-----HHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
++|||+++++|.+++...... ...+++.+++.++.|++.|++||| +. +++|+||+|+||+++.++.+|++|
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d 153 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKE-RKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGD 153 (265)
T ss_pred EEehhccCCCHHHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEec
Confidence 999999999999999875322 457899999999999999999999 66 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
||++........ ......|+..|+|||+..+..++.++||||+|+++|+|++|+.||.....
T Consensus 154 ~g~~~~~~~~~~-----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------------- 215 (265)
T cd08217 154 FGLAKILGHDSS-----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ------------- 215 (265)
T ss_pred ccccccccCCcc-----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-------------
Confidence 999986543221 12234689999999999988899999999999999999999999875321
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+...+.+..... +.........+.+++.+|++.+|++||++.+|+++
T Consensus 216 -~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 216 -LQLASKIKEGKF------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -HHHHHHHhcCCC------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 111111111111 11112345678899999999999999999999875
No 267
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.2e-33 Score=308.63 Aligned_cols=261 Identities=25% Similarity=0.411 Sum_probs=203.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCc----eEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLL----PVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
.++|+..+.||+|+||.||+|.+..++. .||+|.+..... .....+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 3568888999999999999999876665 478888764332 223478899999999999999999998632
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
...++++||+++|+|.+++... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~D 152 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEH----KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITD 152 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcc
Confidence 2357899999999999999764 23588999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhh
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
||+++........ .......++..|+|||...+..++.++|||||||++|||++ |+.||.....
T Consensus 153 fg~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~------------ 217 (303)
T cd05110 153 FGLARLLEGDEKE---YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT------------ 217 (303)
T ss_pred ccccccccCcccc---cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH------------
Confidence 9999865432111 11112345778999999988899999999999999999997 9999865321
Q ss_pred CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhh
Q 001858 936 LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKY 998 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~ 998 (1003)
....+.+...... + ....+...+..++.+||..+|++||+++++++.++++.+..
T Consensus 218 --~~~~~~~~~~~~~-~-----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 218 --REIPDLLEKGERL-P-----QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred --HHHHHHHHCCCCC-C-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 1112222211111 1 01123456788999999999999999999999999876544
No 268
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8e-34 Score=309.42 Aligned_cols=249 Identities=24% Similarity=0.339 Sum_probs=201.1
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++ ..+...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceEE
Confidence 4667788999999999999998888999999987443 33456789999999999999999999984 45677899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
|+||+++++|.+++.. ..+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++..
T Consensus 80 v~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06642 80 IMEYLGGGSALDLLKP------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQ 150 (277)
T ss_pred EEEccCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccccc
Confidence 9999999999999864 3578999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME 942 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1003)
..... .......|+..|+|||++.+..++.++||||+||++|||++|+.||....... ...
T Consensus 151 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------------~~~ 211 (277)
T cd06642 151 LTDTQ-----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--------------VLF 211 (277)
T ss_pred ccCcc-----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--------------HHh
Confidence 53321 11223457889999999998889999999999999999999999986432211 000
Q ss_pred HHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 943 IVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 943 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.+.... .+ .........+.+++.+||+.+|++||++.|++++-
T Consensus 212 ~~~~~~--~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06642 212 LIPKNS--PP----TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHK 254 (277)
T ss_pred hhhcCC--CC----CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence 011000 01 11122345688999999999999999999999853
No 269
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2e-33 Score=301.45 Aligned_cols=247 Identities=29% Similarity=0.445 Sum_probs=194.7
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
++||+|+||.||+|... +++.||+|.++.... .....+.+|++++++++|||++++++++. ..+..++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECC
Confidence 46899999999999865 678899999874432 22457889999999999999999999863 355679999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++... ...+++.+++.++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++.......
T Consensus 75 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (250)
T cd05085 75 PGGDFLSFLRKK----KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI 147 (250)
T ss_pred CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccc
Confidence 999999998753 23578999999999999999999999 99999999999999999999999999997543221
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHHHh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDF 946 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 946 (1003)
... .....++..|+|||+..+..++.++||||+|+++|++++ |..||...... .....+..
T Consensus 148 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------------~~~~~~~~ 209 (250)
T cd05085 148 YSS----SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------------QAREQVEK 209 (250)
T ss_pred ccc----CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------------HHHHHHHc
Confidence 111 111234678999999988889999999999999999998 99998653211 11111111
Q ss_pred hcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 947 ALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 947 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
.... .....+...+.+++.+|++.+|++||++.|+++.|.
T Consensus 210 ~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 210 GYRM------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCC------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1111 111123567889999999999999999999999875
No 270
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.7e-33 Score=308.65 Aligned_cols=260 Identities=26% Similarity=0.436 Sum_probs=202.2
Q ss_pred hccCCccCeeeeccceEEEEEEECC-----CCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 775 (1003)
.++|++.+.||+|+||.||+|.+.. ++..||+|+++.... ...+.+.+|++++++++|||++++++++ .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~-----~ 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVC-----A 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEE-----c
Confidence 4679999999999999999998743 567899999874432 2346789999999999999999999985 3
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecc
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSND-----------------QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGD 838 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 838 (1003)
.+...++|+||+++|+|.+++..... .....+++.+++.++.|++.|++|||+. +++|||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 45667999999999999999975421 1123578899999999999999999999 999999
Q ss_pred CCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCC
Q 001858 839 LKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRP 917 (1003)
Q Consensus 839 ikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P 917 (1003)
|||+||+++.++.++++|||++.......... ......++..|+|||...+..++.++||||+||++|||++ |..|
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p 232 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYK---ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 232 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCcccc---ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999987553221111 1112234678999999988899999999999999999998 8888
Q ss_pred CCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 918 THTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
|...... +....+...... ...+.+...+.+++.+|++.+|++||++.|+++.|+
T Consensus 233 ~~~~~~~--------------~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 233 YYGMAHE--------------EVIYYVRDGNVL------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCCHH--------------HHHHHHhcCCCC------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 7543211 111111111110 011223567889999999999999999999999886
No 271
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.7e-33 Score=301.19 Aligned_cols=256 Identities=27% Similarity=0.384 Sum_probs=202.7
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc--chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG--SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|.+.+.||+|+||.||+|.+..+++.||+|.++..... ..+.+.+|++++++++|+||+++++++ .+.+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 588889999999999999999888999999998755443 567899999999999999999999984 4567789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++.. ...+++..++.++.+++.|++|||+. +++|+||+|+||+++.++.+||+|||.+.
T Consensus 76 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~ 147 (264)
T cd06626 76 IFMEYCSGGTLEELLEH-----GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAV 147 (264)
T ss_pred EEEecCCCCcHHHHHhh-----cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccccccc
Confidence 99999999999999986 34578899999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCC---CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN---VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
......... ........++..|+|||++.+.. .+.++||||+|+++|||++|+.||........
T Consensus 148 ~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~------------ 214 (264)
T cd06626 148 KLKNNTTTM-GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ------------ 214 (264)
T ss_pred ccCCCCCcc-cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH------------
Confidence 764432111 11012345788999999988766 88999999999999999999999975321100
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.......... ...+........+.+++.+|++.+|++||++.|++.+
T Consensus 215 ---~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 215 ---IMFHVGAGHK--PPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred ---HHHHHhcCCC--CCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000011 1111112234567789999999999999999998764
No 272
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4e-33 Score=302.41 Aligned_cols=257 Identities=21% Similarity=0.320 Sum_probs=202.3
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc------cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK------GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
+|+..+.||+|+||.||+|....+++.||+|+++.... ...+.+.+|++++++++|||++++++++ .+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 47888999999999999999988999999999874331 1246789999999999999999999984 456
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-CeEEcc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSD 856 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~D 856 (1003)
+..++|+||+++++|.+++.. .+.+++..+..++.|++.|++|||+. +++|+||+|+||+++.++ .+||+|
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~d 147 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSK-----YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIAD 147 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcc
Confidence 778999999999999999986 34688999999999999999999999 999999999999998776 599999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
||.+..+..... ..........|+..|+|||...+..++.++||||+|+++|+|++|+.||.........
T Consensus 148 fg~~~~~~~~~~-~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~--------- 217 (268)
T cd06630 148 FGAAARLAAKGT-GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL--------- 217 (268)
T ss_pred cccccccccccc-cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---------
Confidence 999976643211 1111222356889999999998888999999999999999999999998643211100
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+........ .....+.....+.+++.+|++.+|++||++.|++++
T Consensus 218 -----~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 218 -----ALIFKIASATT--APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -----HHHHHHhccCC--CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00100000000 011122345678889999999999999999999864
No 273
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.9e-33 Score=304.49 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=205.3
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|++++++++||||+++++++ ..+...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF-----YNNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheee-----ecCCEEE
Confidence 36788899999999999999999899999999987543 33456789999999999999999999985 3457889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
+|+||+++++|.+++.... ..+++..+.+++.|++.|++|+|+ . +++|+||||+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred EEEEecCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999998742 578899999999999999999999 7 9999999999999999999999999998
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
........ ....++..|+|||...+..++.++||||+|+++|+|++|+.||....... +..
T Consensus 149 ~~~~~~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------------~~~ 209 (265)
T cd06605 149 GQLVNSLA-------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP------------DGI 209 (265)
T ss_pred hhhHHHHh-------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc------------ccH
Confidence 75532110 11568889999999999999999999999999999999999987543211 111
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+.++......+.... .......+.+++.+||..+|++||++.|++.+
T Consensus 210 ~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 210 FELLQYIVNEPPPRLP--SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHHHHHHhcCCCCCCC--hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 2222222222111111 11145678899999999999999999999875
No 274
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.2e-33 Score=305.94 Aligned_cols=269 Identities=22% Similarity=0.298 Sum_probs=199.1
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|+..+.||+|++|.||+|++..+++.||||.++... ....+.+.+|++++++++||||+++++++ .+++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 4788999999999999999999899999999987433 22346789999999999999999999984 4567889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+. ++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++.
T Consensus 76 ~v~e~~~-~~l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~ 148 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 148 (284)
T ss_pred EEeeccc-cCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchh
Confidence 9999996 58999887643 35689999999999999999999999 99999999999999999999999999987
Q ss_pred ccccCCccccCcccccccccccccCccccCCCC-CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-Cch-
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN-VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-LPE- 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~~~- 938 (1003)
...... .......++..|+|||...+.. ++.++||||+|+++|||++|+.||......+. ........ .+.
T Consensus 149 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~ 222 (284)
T cd07860 149 AFGVPV-----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDE 222 (284)
T ss_pred hcccCc-----cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCCh
Confidence 553211 1112234688999999876644 58889999999999999999999865322111 11111100 000
Q ss_pred hH----HHHH---HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KV----MEIV---DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~----~~~i---~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.. .... .....................+.+++.+|++.+|++||+++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 223 VVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00 0000 0000000000001111234567789999999999999999999865
No 275
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4.7e-33 Score=299.66 Aligned_cols=250 Identities=24% Similarity=0.385 Sum_probs=201.3
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|+..+.||+|+||.||+|.+..+++.+|+|.+.... ....+.+.+|++++++++|||++++++.+ ..++..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 4788899999999999999999899999999987442 33457899999999999999999999874 4567789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC-CCeEEcccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLA 860 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~DfG~a 860 (1003)
+||||+++++|.+++.... ...+++..++.++.+++.|++|||++ +++|+||+|+||+++.+ +.+|++|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~ 149 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGIS 149 (256)
T ss_pred EEEecCCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCc
Confidence 9999999999999998743 34589999999999999999999999 99999999999999865 46899999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
....... ......|+..|+|||...+..++.++||||+|+++|+|++|+.||...... ...
T Consensus 150 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-------------~~~ 210 (256)
T cd08220 150 KILSSKS------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-------------ALV 210 (256)
T ss_pred eecCCCc------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-------------HHH
Confidence 8653321 112245888999999998888999999999999999999999998653211 111
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
......... +........+.+++.+||+.+|++||++.|++++
T Consensus 211 ~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 211 LKIMSGTFA-------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHHHhcCCC-------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111111110 0111235568899999999999999999999875
No 276
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.5e-33 Score=299.81 Aligned_cols=254 Identities=28% Similarity=0.481 Sum_probs=201.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.++||+|+||.||+|.+. .+..+|+|.+... ....+.+.+|++++++++|+|++++.+++. . ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~-~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-----K-EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEc-----C-CCeE
Confidence 467899999999999999999865 4557999988643 234578899999999999999999998852 2 5679
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
++|||+++++|.+++.... ....++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.
T Consensus 77 ~v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 150 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR 150 (260)
T ss_pred EEEEeCCCCcHHHHHHhCC---ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCccee
Confidence 9999999999999998643 34678899999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
........ ......++..|+|||++.++.++.++|+||+||++|++++ |+.||...... ..
T Consensus 151 ~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------------~~ 212 (260)
T cd05073 151 VIEDNEYT----AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------------EV 212 (260)
T ss_pred eccCCCcc----cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--------------HH
Confidence 65432211 1112345678999999988889999999999999999999 99998653211 11
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
.+.+...... +........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 213 ~~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 213 IRALERGYRM------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHhCCCCC------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1111111110 1112334578899999999999999999999998864
No 277
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.2e-33 Score=309.67 Aligned_cols=269 Identities=24% Similarity=0.327 Sum_probs=201.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++|++.++||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+++++.++||||+++++++ .++...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 368889999999999999999988899999999864332 2346788999999999999999999984 557788
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++|+||++++++.++... ...+++.+++.++.|+++|++|||+. +++|||++|+||++++++.++++|||++
T Consensus 76 ~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~ 147 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKY-----PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFA 147 (286)
T ss_pred EEEEecCCccHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeee
Confidence 999999999989887764 34589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH--hhCc
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK--MALP 937 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~--~~~~ 937 (1003)
....... .......++..|+|||+..+ ..++.++||||+|+++|||++|+.||......+ ....... ....
T Consensus 148 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 221 (286)
T cd07846 148 RTLAAPG-----EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNLI 221 (286)
T ss_pred eeccCCc-----cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCCc
Confidence 7653321 11223457899999998765 457789999999999999999999986432211 0000000 0011
Q ss_pred hhHHHHH------HhhcccCCC---CchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIV------DFALLLDPG---NERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i------~~~l~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+...... ......... ............+.+++.+||+.+|++||++++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 222 PRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 1111111 111111000 0011112345678999999999999999999999875
No 278
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.7e-33 Score=299.00 Aligned_cols=251 Identities=30% Similarity=0.523 Sum_probs=199.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|++.+.||+|+||.||+|.+. .+..+|+|.+... ......|.+|++++++++||+++++++++ ......+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPIC 75 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCceE
Confidence 346888899999999999999886 4668999988633 23346789999999999999999999984 4456789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++... .+.+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 76 ~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 76 LVFEFMEHGCLSDYLRAQ----RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred EEEEcCCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 999999999999999764 24578999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
........ ......++.+|+|||...++.++.++||||+|+++|||++ |+.||...... ..
T Consensus 149 ~~~~~~~~----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------------~~ 210 (256)
T cd05112 149 FVLDDQYT----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--------------EV 210 (256)
T ss_pred ecccCccc----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--------------HH
Confidence 65332111 1112335678999999988889999999999999999998 99998653211 11
Q ss_pred HHHHHhhccc-CCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 941 MEIVDFALLL-DPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 941 ~~~i~~~l~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.+.+...... .+. .....+.+++.+||+.+|++||++.|++++|
T Consensus 211 ~~~~~~~~~~~~~~-------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 211 VETINAGFRLYKPR-------LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHhCCCCCCCCC-------CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1111111111 111 1245688999999999999999999999876
No 279
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-33 Score=310.16 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=200.1
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
+.|.....||+|+||.||+|.+..++..||||.+........+.+.+|+.+++.++|||++++++.+ ...+..++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~-----~~~~~~~l 96 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY-----LVGDELWV 96 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhe-----ecCCeEEE
Confidence 3444457799999999999999888999999998765555567899999999999999999999884 44677899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++++|.+++.. +.+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 97 v~e~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 97 VMEFLEGGALTDIVTH------TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred EEeCCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 9999999999998854 3578999999999999999999999 999999999999999999999999999975
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME 942 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1003)
..... .......|+..|+|||...+..++.++||||+|+++|||++|+.||...... ....
T Consensus 168 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------------~~~~ 228 (292)
T cd06658 168 VSKEV-----PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--------------QAMR 228 (292)
T ss_pred ccccc-----ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------------HHHH
Confidence 43211 1112356889999999998888999999999999999999999998643210 0001
Q ss_pred HHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 943 IVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 943 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+........ .........+..++.+|+..+|++||+++|++++
T Consensus 229 ~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 229 RIRDNLPPRV----KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHhcCCCcc----ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1111111110 1111234467788999999999999999999986
No 280
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.6e-33 Score=300.19 Aligned_cols=255 Identities=23% Similarity=0.361 Sum_probs=199.2
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc------cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK------GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
+|++.+.||+|+||+||+|... +++.+|+|.++.... ...+.+.+|++++++++|+||+++++++ .+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC-----LDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe-----ecC
Confidence 5888999999999999999874 678899998864321 2235688999999999999999999985 345
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..++|+||+++++|.+++.+ ...+++..++.++.|++.|++|||+. +|+|+||+|+||+++.++.++++||
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 146 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNR-----FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDF 146 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccc
Confidence 788999999999999999976 34678999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCcc-ccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQ-ETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|++......... ..........|+..|+|||+..+..++.++||||+||++|+|++|+.||........
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---------- 216 (265)
T cd06631 147 GCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA---------- 216 (265)
T ss_pred hhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH----------
Confidence 999765321111 111122235689999999999988899999999999999999999999965321100
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
... +.......+. ........+.+++.+||+.+|++||++.|++++
T Consensus 217 ---~~~-~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 217 ---MFY-IGAHRGLMPR----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred ---HHH-hhhccCCCCC----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 0000000010 111234567889999999999999999999764
No 281
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.1e-33 Score=310.11 Aligned_cols=258 Identities=28% Similarity=0.322 Sum_probs=204.1
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc---chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG---SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||+||+|.+..+++.||+|.+...... ..+.+.+|+++++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 3688899999999999999999988999999999754322 456789999999999999999999884 45677
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+.+++|.+++.... ...+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||+
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecch
Confidence 899999999999999997643 35789999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccc------------------------cCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCC
Q 001858 860 AKFLFDRPIQE------------------------TSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGR 915 (1003)
Q Consensus 860 a~~~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~ 915 (1003)
+.......... .........||..|+|||+..+..++.++||||+|+++|+|++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~ 229 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCC
Confidence 87543211100 001112346889999999999888999999999999999999999
Q ss_pred CCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC----HHHHHHH
Q 001858 916 RPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH----MADAVKN 990 (1003)
Q Consensus 916 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs----~~ev~~~ 990 (1003)
.||...... ....+....... .+........+.+++.+|+..+|++||+ ++|++.+
T Consensus 230 ~pf~~~~~~-------------~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 230 TPFKGSNRD-------------ETFSNILKKEVT------FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred CCCCCCchH-------------HHHHHHhcCCcc------CCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 999754321 011111111110 1111114567899999999999999999 7777764
No 282
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-34 Score=299.61 Aligned_cols=247 Identities=26% Similarity=0.343 Sum_probs=202.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.+.|+.-++||+|+||+||-++...+|+.||.|.+.+. .........+|-.++.+++.+.||.+--. |+..+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCCC
Confidence 35688889999999999999999999999999988633 23334567889999999999999887655 67889
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++|+..|.||+|.-+|.... .+.+++..+.-+|.+|+-||++||+. +||+||+||+|||+|+.|+++|+|.|
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g---~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHG---NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred ceEEEEEeecCCceeEEeeccC---CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccc
Confidence 9999999999999999998865 45799999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
+|..+.++. .....+||.+|||||++.++.|+...|.||+||++|||+.|+.||..... .
T Consensus 333 LAvei~~g~------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke--------------K 392 (591)
T KOG0986|consen 333 LAVEIPEGK------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE--------------K 392 (591)
T ss_pred eEEecCCCC------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh--------------h
Confidence 998875432 22345899999999999999999999999999999999999999864321 1
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI 982 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP 982 (1003)
.-.+-++++...++.... +..+++..++.+.-+..+|++|.
T Consensus 393 vk~eEvdrr~~~~~~ey~---~kFS~eakslc~~LL~Kdp~~RL 433 (591)
T KOG0986|consen 393 VKREEVDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKDPEKRL 433 (591)
T ss_pred hhHHHHHHHHhcchhhcc---cccCHHHHHHHHHHHccCHHHhc
Confidence 122345556555553333 33445556666677788888886
No 283
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-34 Score=282.13 Aligned_cols=260 Identities=22% Similarity=0.285 Sum_probs=215.2
Q ss_pred HhccCCcc-CeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCC
Q 001858 701 ATNEFSLS-NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 701 ~~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.+++|++. ++||-|-.|.|-.+.++.+++++|+|++... ....+|++..-.. .|||||.++++|.. .+.+..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeN-s~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYEN-SYQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhh-hccCce
Confidence 45667664 5799999999999999999999999998633 4456788876665 69999999999754 467788
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC---CCCeEEc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHVS 855 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~ 855 (1003)
...+|||.|+||.|...|+.++ ...+++.++..|..||..|+.|||+. .|.||||||+|+|.+. +..+|++
T Consensus 133 cLLiVmE~meGGeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred eeEeeeecccchHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEec
Confidence 8899999999999999999876 55799999999999999999999999 9999999999999974 5579999
Q ss_pred ccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh
Q 001858 856 DFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 856 DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
|||+|+.... .......+-|+.|.|||++...+|+...|+||+||++|-|++|.+||-.... ..
T Consensus 207 DfGFAK~t~~------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg----------~a 270 (400)
T KOG0604|consen 207 DFGFAKETQE------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG----------LA 270 (400)
T ss_pred ccccccccCC------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC----------cc
Confidence 9999985422 2333446789999999999999999999999999999999999999865332 24
Q ss_pred CchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 936 LPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
+++.++.-|......-|.+ .+.+.+++..++++..+..+|++|.|+.|+..+=
T Consensus 271 ispgMk~rI~~gqy~FP~p---EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 271 ISPGMKRRIRTGQYEFPEP---EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred CChhHHhHhhccCccCCCh---hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 5666777677666665544 3455666777888899999999999999998763
No 284
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.7e-33 Score=304.00 Aligned_cols=253 Identities=29% Similarity=0.475 Sum_probs=197.4
Q ss_pred CeeeeccceEEEEEEECCCC------ceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 709 NLIGQGSFGFVYRGNLGEDL------LPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+.||+|+||.||+|++.... +.||+|.+.... ......+.+|+++++.++||||+++++++ ...+..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVC-----LLNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeee-----cCCCCeE
Confidence 46899999999999986433 679999886433 23467899999999999999999999985 3456789
Q ss_pred EeeecccCCCHHHHHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-----CeEE
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQ--VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-----VAHV 854 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-----~~kl 854 (1003)
+||||+++++|.+++...... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .+++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 999999999999999764321 234578999999999999999999998 999999999999999877 8999
Q ss_pred cccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHH
Q 001858 855 SDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~ 933 (1003)
+|||++.......... ......++..|+|||++.++.++.++|||||||++|||++ |+.||......
T Consensus 153 ~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--------- 220 (269)
T cd05044 153 GDFGLARDIYKSDYYR---KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--------- 220 (269)
T ss_pred CCcccccccccccccc---cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---------
Confidence 9999997654322111 1112345788999999999999999999999999999998 99998643211
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+....+.... +.......+..+.+++.+||..+|++||++.++.+.|.
T Consensus 221 -----~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 221 -----EVLQHVTAGG------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -----HHHHHHhcCC------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111111110 11111234567889999999999999999999999875
No 285
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.1e-33 Score=301.41 Aligned_cols=249 Identities=26% Similarity=0.372 Sum_probs=200.1
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-----ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-----KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+|+..+.||+|+||.||+|....++..||+|.+.... ....+.+.+|+++++.++|||++++++++ .++.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE-----REED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE-----ecCC
Confidence 4778899999999999999998889999999986543 22456789999999999999999999985 4456
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++|+||+++++|.+++.. .+.+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~ 147 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKK-----YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFG 147 (258)
T ss_pred eEEEEEEecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCc
Confidence 78999999999999999976 34588999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCC-CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN-VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
.+....... ......|+..|+|||...... ++.++|+||+|+++|+|++|+.||......
T Consensus 148 ~~~~~~~~~------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~------------- 208 (258)
T cd06632 148 MAKQVVEFS------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV------------- 208 (258)
T ss_pred cceeccccc------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-------------
Confidence 997653221 122356889999999987766 899999999999999999999998653210
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
........ .... ..........+.+++.+||+.+|++||++.+++++
T Consensus 209 ~~~~~~~~---~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 209 AAVFKIGR---SKEL---PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHHHHHh---cccC---CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 00011110 0000 01112234567889999999999999999999864
No 286
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.4e-33 Score=302.64 Aligned_cols=239 Identities=23% Similarity=0.372 Sum_probs=185.9
Q ss_pred eeeeccceEEEEEEECC------------------------CCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeE
Q 001858 710 LIGQGSFGFVYRGNLGE------------------------DLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKI 765 (1003)
Q Consensus 710 ~lg~G~~g~Vy~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 765 (1003)
.||+|+||.||+|.... ....||+|++..........|.+|+++++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999998532 124589999875544445678899999999999999999
Q ss_pred eeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceE
Q 001858 766 ITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVL 845 (1003)
Q Consensus 766 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nil 845 (1003)
+++|. .+...++||||+++|+|.+++... .+.+++..+..++.|+++|++|||+. +|+||||||+||+
T Consensus 82 ~~~~~-----~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nil 149 (274)
T cd05076 82 HGVCV-----RGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNIL 149 (274)
T ss_pred EEEEE-----eCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEE
Confidence 99964 355679999999999999998753 34688999999999999999999999 9999999999999
Q ss_pred eCCCC-------CeEEcccccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHH-hCCC
Q 001858 846 LDHDM-------VAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMF-TGRR 916 (1003)
Q Consensus 846 l~~~~-------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell-~g~~ 916 (1003)
++..+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.
T Consensus 150 l~~~~~~~~~~~~~kl~d~g~~~~~~~~---------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~ 220 (274)
T cd05076 150 LARLGLAEGTSPFIKLSDPGVSFTALSR---------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEV 220 (274)
T ss_pred EeccCcccCccceeeecCCccccccccc---------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 97643 4899999988643211 11346788999998765 56889999999999999995 6999
Q ss_pred CCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 917 PTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 917 P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
||......+ .......... .+. .....+.+++.+||+.+|++||+++++++.|
T Consensus 221 p~~~~~~~~--------------~~~~~~~~~~-~~~-------~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 221 PLKERTPSE--------------KERFYEKKHR-LPE-------PSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred CccccChHH--------------HHHHHHhccC-CCC-------CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 986532211 1111111111 111 1124578899999999999999999999887
No 287
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9.1e-33 Score=307.57 Aligned_cols=203 Identities=24% Similarity=0.340 Sum_probs=163.3
Q ss_pred cCeeeeccceEEEEEEECC--CCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 708 SNLIGQGSFGFVYRGNLGE--DLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
..+||+|+||+||+|+... ++..||+|.++... ....+.+|++++++++||||+++++++.. ..+...++|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEe
Confidence 3689999999999999753 56789999886432 23567899999999999999999998643 34567799999
Q ss_pred cccCCCHHHHHhhcCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEe----CCCCCeEEccc
Q 001858 786 YMQSGSLEDWLQQSND----QVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSDF 857 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill----~~~~~~kl~Df 857 (1003)
|+++ +|.+++..... .....+++..++.++.|++.|++|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9875 88888764321 1123588999999999999999999999 99999999999999 56679999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
|+++........ ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 157 G~a~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 157 GFARLFNSPLKP--LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cceeccCCCccc--ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 999866432211 1122235689999999988764 5789999999999999999999999754
No 288
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.1e-33 Score=304.59 Aligned_cols=259 Identities=22% Similarity=0.383 Sum_probs=202.5
Q ss_pred ccCCccCeeeeccceEEEEEEECC-----CCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGE-----DLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
++|++.+.||+|+||+||+|+.+. +.+.||+|........ ..+.+.+|++++++++|||++++++++ .+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLC-----RE 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEE-----CC
Confidence 578899999999999999999753 3467999988654433 457899999999999999999999985 44
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCe
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQV----DGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 852 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~ 852 (1003)
....++||||+++|+|.++++...... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 567799999999999999998754221 12689999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHH
Q 001858 853 HVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 853 kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~ 931 (1003)
+++|||++....... ........++..|+|||.+.+..++.++||||+|+++|+|++ |..||......
T Consensus 157 ~l~~~~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~------- 225 (275)
T cd05046 157 KVSLLSLSKDVYNSE----YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE------- 225 (275)
T ss_pred EEcccccccccCccc----ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-------
Confidence 999999987543221 112223456788999999888888999999999999999999 78888643211
Q ss_pred HHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 932 VKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
.....+.......+ ....++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 226 -------~~~~~~~~~~~~~~-----~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 226 -------EVLNRLQAGKLELP-----VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -------HHHHHHHcCCcCCC-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11111110000000 11223467889999999999999999999998875
No 289
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.9e-33 Score=306.24 Aligned_cols=252 Identities=22% Similarity=0.285 Sum_probs=204.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.++|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.++++++|||++++++++ ......+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY-----LVGDELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhhee-----eeCCcEE
Confidence 36899999999999999999999888899999998765555567889999999999999999999985 3456789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++.+ ..+++.++..++.|++.|++|||+. +++|||++|+||+++.++.++|+|||++.
T Consensus 93 lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred EEEecCCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 99999999999999975 3478889999999999999999999 99999999999999999999999999987
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
....... ......|++.|+|||.+.+..++.++||||+|+++|++++|+.||......+....
T Consensus 164 ~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------------ 226 (293)
T cd06647 164 QITPEQS-----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------------ 226 (293)
T ss_pred ccccccc-----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------------
Confidence 5533221 11234688999999999888899999999999999999999999975432111000
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
. ...+.............+.+++.+||..+|++||++.+++.+
T Consensus 227 -~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 227 -I-----ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred -h-----hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000001111122334567889999999999999999999986
No 290
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.1e-33 Score=307.37 Aligned_cols=268 Identities=22% Similarity=0.288 Sum_probs=199.6
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc-----chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG-----SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+|++.+.||+|+||.||+|.+..+++.||||.++..... ....+..|++++++++|+||+++++++ .+..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF-----GHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee-----ecCC
Confidence 478889999999999999999988999999999744322 245677899999999999999999985 3467
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||+ +++|.+++.... ..+++.+++.++.|+++|++|||+. +|+|+||+|+||+++.++.++|+|||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg 147 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFG 147 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccce
Confidence 789999999 889999997632 3689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-C
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-L 936 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~ 936 (1003)
+++...... .......++..|+|||.+.+ ..++.++||||+||++|||++|..||......+ ......... .
T Consensus 148 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~ 221 (298)
T cd07841 148 LARSFGSPN-----RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGT 221 (298)
T ss_pred eeeeccCCC-----ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCC
Confidence 997653321 11122346788999998755 457889999999999999999987776533211 111110000 0
Q ss_pred --chhHHHH---HHhh--cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 --PEKVMEI---VDFA--LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 --~~~~~~~---i~~~--l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
....... .... ....+.............+.+++.+||+.+|++||+++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 222 PTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred CchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000 0000 0000001111122345678899999999999999999999985
No 291
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.4e-33 Score=305.17 Aligned_cols=267 Identities=21% Similarity=0.266 Sum_probs=191.6
Q ss_pred hccCCccCeeeeccceEEEEEEECCC---CceEEEEEeccccccch-----------HHHHHHHHHHHhcCCCCceeEee
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGED---LLPVAVKVINLKQKGSI-----------KSFVAECEALKNIRHRNLIKIIT 767 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~ 767 (1003)
.++|++.+.||+|+||.||+|.+..+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 46899999999999999999999877 66778887543322111 11223344556678999999998
Q ss_pred eeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC
Q 001858 768 VCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 847 (1003)
Q Consensus 768 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~ 847 (1003)
++.... ....+.++++|+... ++.+.++.. ...++..+..++.|++.|++|||+. +|+||||||+||+++
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~ 160 (294)
T PHA02882 91 CGSFKR-CRMYYRFILLEKLVE-NTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVD 160 (294)
T ss_pred eeeEec-CCceEEEEEEehhcc-CHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence 754321 112345778887754 777777652 2357888899999999999999999 999999999999999
Q ss_pred CCCCeEEcccccccccccCCccc--cCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCc
Q 001858 848 HDMVAHVSDFGLAKFLFDRPIQE--TSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDG 925 (1003)
Q Consensus 848 ~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~ 925 (1003)
.++.++|+|||+|+.+....... .........||+.|+|||+..+..++.++||||+||++|||++|+.||.......
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~ 240 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG 240 (294)
T ss_pred CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch
Confidence 99999999999998764321111 1112223469999999999999999999999999999999999999998653221
Q ss_pred chhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 926 LTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
...... ..+.+.+..... .....+...+.+++..|++.+|++||+++++.+.+
T Consensus 241 ~~~~~~--------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 241 NLIHAA--------KCDFIKRLHEGK-----IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHh--------HHHHHHHhhhhh-----hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111100 011111111100 01122356788999999999999999999998865
No 292
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=9.5e-33 Score=297.59 Aligned_cols=252 Identities=32% Similarity=0.597 Sum_probs=200.8
Q ss_pred CCccCeeeeccceEEEEEEECCCC----ceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDL----LPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
+++.+.||+|+||.||+|++...+ ..||+|+++..... ..+.+.+|+++++.++|+|++++++++ .+.+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVC-----TEEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEE-----cCCCe
Confidence 356789999999999999998765 88999999755433 567899999999999999999999985 34567
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.+++|||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||+
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~ 149 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNR---PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGL 149 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhh---hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCC
Confidence 899999999999999998743 12289999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
+............ ...++..|+|||...+..++.++||||+|+++|+|++ |+.||..... .
T Consensus 150 ~~~~~~~~~~~~~----~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------------~ 211 (258)
T smart00219 150 SRDLYDDDYYKKK----GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------------E 211 (258)
T ss_pred ceecccccccccc----cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------------H
Confidence 9876443211111 1236789999999988889999999999999999998 7888764211 1
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
...+.+...... ........++.+++.+|++.+|++||++.|+++.|
T Consensus 212 ~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 212 EVLEYLKKGYRL------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHhcCCCC------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111112111111 11112456788999999999999999999998753
No 293
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.2e-33 Score=311.43 Aligned_cols=279 Identities=21% Similarity=0.234 Sum_probs=207.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.++|++.+.||+|+||.||+|....+++.||+|++.... ....+.+.+|+.++++++||||+++.+++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 468999999999999999999999999999999987432 234567888999999999999999998764322 34567
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+. ++|.+++.. ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHS-----DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred EEEEEehhh-hhHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccc
Confidence 899999996 589998875 34589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH--hhC
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK--MAL 936 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~--~~~ 936 (1003)
+......... .........|+..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ...... ...
T Consensus 154 ~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~-~~~~~~~~g~~ 231 (334)
T cd07855 154 ARGLSSSPTE-HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ-LKLILSVLGSP 231 (334)
T ss_pred ceeecccCcC-CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH-HHHHHHHhCCC
Confidence 9765332211 1111223468899999998765 4688999999999999999999999976432111 100000 011
Q ss_pred chh---------HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 937 PEK---------VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 937 ~~~---------~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+.. ..+..+..-...+..-..........+.+++.+|++.+|++||++++++.+-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 296 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF 296 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence 111 11111111001110001111234677899999999999999999999998643
No 294
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.9e-33 Score=306.38 Aligned_cols=256 Identities=23% Similarity=0.303 Sum_probs=198.0
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+++++.++||||+++++.+ ..++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCE
Confidence 36888999999999999999999999999999987443 23346788999999999999999999884 45677
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++++|.++++. .+.+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKN-----IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred EEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCC
Confidence 8999999999999999976 34689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCcc----------ccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhh
Q 001858 860 AKFLFDRPIQ----------ETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLH 929 (1003)
Q Consensus 860 a~~~~~~~~~----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~ 929 (1003)
++........ ..........|+..|+|||.+.+..++.++|+||+||++|||++|+.||.+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~----- 222 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE----- 222 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----
Confidence 8642111000 0000111245788999999998888999999999999999999999998643211
Q ss_pred HHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 001858 930 GFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 930 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~ 989 (1003)
++...+.......+... ......+.+++.+||+.+|++||++.++.+
T Consensus 223 ---------~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ 269 (305)
T cd05609 223 ---------ELFGQVISDDIEWPEGD----EALPADAQDLISRLLRQNPLERLGTGGAFE 269 (305)
T ss_pred ---------HHHHHHHhcccCCCCcc----ccCCHHHHHHHHHHhccChhhccCccCHHH
Confidence 11111111111111111 123556889999999999999998544433
No 295
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4.3e-33 Score=305.37 Aligned_cols=269 Identities=23% Similarity=0.312 Sum_probs=202.6
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++|||++++++++ ..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF-----PHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeeE
Confidence 5888999999999999999998889999999987543 33457899999999999999999999985 4467789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+ +++|.+++.... ..+++.+++.++.|+++|++|||+. +++|+||||+||+++.++.++++|||.+.
T Consensus 76 ~v~e~~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~ 147 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLAR 147 (286)
T ss_pred EEeccc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence 999999 999999987642 4689999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC---c
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL---P 937 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~---~ 937 (1003)
....... .......|+..|+|||.+.+. .++.++||||+|+++|||++|+.||...... ..........- +
T Consensus 148 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~ 222 (286)
T cd07832 148 LFSEEEP----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNE 222 (286)
T ss_pred cccCCCC----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCCh
Confidence 6543221 112234689999999987654 4688999999999999999998887653221 11111111000 0
Q ss_pred hhHHHH---HHhhcccCCCCch----hhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEI---VDFALLLDPGNER----AKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~---i~~~l~~~~~~~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
....+. .+......+.... ....+....+.+++.+|++.+|++||+++++++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 223 ETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred HHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 0000000000000 1112334778899999999999999999999876
No 296
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.6e-33 Score=298.14 Aligned_cols=248 Identities=29% Similarity=0.433 Sum_probs=197.1
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
++||+|+||.||+|.+.. ++.||+|.++..... ..+.+.+|++++++++||||+++++++ .+....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC-----VQKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCCCeEEEEEcC
Confidence 479999999999999987 889999998754433 456899999999999999999999985 4566789999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++... ...+++..+..++.+++.|++|||++ +++||||||+||+++.++.+|++|||.+.......
T Consensus 75 ~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (251)
T cd05041 75 PGGSLLTFLRKK----KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI 147 (251)
T ss_pred CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCc
Confidence 999999999763 23578999999999999999999999 99999999999999999999999999997553221
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHHHHHHh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDF 946 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 946 (1003)
.. .......++..|+|||.+.++.++.++|+||+|+++|||++ |..||...... .....+..
T Consensus 148 ~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------------~~~~~~~~ 210 (251)
T cd05041 148 YT---VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--------------QTRERIES 210 (251)
T ss_pred ce---eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--------------HHHHHHhc
Confidence 11 11111234667999999988899999999999999999999 88888654221 11111211
Q ss_pred hcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 947 ALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 947 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
.... ......+..+.+++.+|+..+|++||++.|+++.|.
T Consensus 211 ~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 211 GYRM------PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCC------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 1111 111233567889999999999999999999999875
No 297
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.1e-32 Score=298.34 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=206.1
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|++++++++|||++++++++ ......+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF-----YKEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----ccCCeEE
Confidence 368889999999999999999998999999999875543 4467899999999999999999999985 4457889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
+|+||+++++|.+++... ..+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred EEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccc
Confidence 999999999999999863 568999999999999999999999 8 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
......... .....++..|+|||...+..++.++||||||+++|+|++|+.||...... ..
T Consensus 148 ~~~~~~~~~-----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--------------~~ 208 (264)
T cd06623 148 KVLENTLDQ-----CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--------------SF 208 (264)
T ss_pred eecccCCCc-----ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--------------CH
Confidence 765332211 12345788999999999888999999999999999999999998764320 01
Q ss_pred HHHHHhhcccCCCCchhhHHH-HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEE-CLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~-~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+.+........ ...... ....+.+++.+|++++|++||++.|++++
T Consensus 209 ~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 209 FELMQAICDGPP---PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHhcCCC---CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111111111111 001111 45678899999999999999999999985
No 298
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=338.56 Aligned_cols=255 Identities=26% Similarity=0.361 Sum_probs=206.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
-+|.....||.|.||.||-|....+|...|+|-++... ....+.+.+|..++..++|||+|+++|+ ..+++..
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGV-----EvHRekv 1309 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGV-----EVHREKV 1309 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCce-----eecHHHH
Confidence 46777889999999999999999999999999886433 3345678899999999999999999998 5567788
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++.||||++|+|.+.++. ++-.++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|
T Consensus 1310 ~IFMEyC~~GsLa~ll~~-----gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa 1381 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEH-----GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSA 1381 (1509)
T ss_pred HHHHHHhccCcHHHHHHh-----cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccce
Confidence 999999999999999987 34566777777889999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCC---CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN---VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
..+.... ......-....||+.|||||++.+.. -..++||||+|||+.||+||+.||+..++.
T Consensus 1382 ~ki~~~~-~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne------------- 1447 (1509)
T KOG4645|consen 1382 VKIKNNA-QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE------------- 1447 (1509)
T ss_pred eEecCch-hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------------
Confidence 8876542 22233344678999999999987754 457899999999999999999999876543
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.-..+.+.-..| +.++....+=.+++..|+..||..|-++.|++++
T Consensus 1448 --~aIMy~V~~gh~P----q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1448 --WAIMYHVAAGHKP----QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred --hHHHhHHhccCCC----CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 2222222222222 2223355666788889999999999988888765
No 299
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.5e-33 Score=312.20 Aligned_cols=278 Identities=21% Similarity=0.243 Sum_probs=207.6
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.++|.+.+.||+|+||+||+|++..+++.||||.++.. .....+.+.+|+.+++.++||||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 46799999999999999999999999999999998643 2333567788999999999999999999865433333356
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|+||+. ++|.+++.. .+.+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+
T Consensus 84 ~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS-----SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 899999996 589998876 35689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHH------
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFV------ 932 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~------ 932 (1003)
+....... .......++..|+|||.+.. ..++.++||||+||++|+|++|+.||....... ......
T Consensus 155 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 228 (337)
T cd07858 155 ARTTSEKG-----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITELLGSP 228 (337)
T ss_pred ccccCCCc-----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCC
Confidence 97653221 11223457889999998765 468899999999999999999999996542111 000000
Q ss_pred -----HhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHH
Q 001858 933 -----KMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN--LCAA 994 (1003)
Q Consensus 933 -----~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~--L~~~ 994 (1003)
.........+.++..-.............+...+.+++.+|++.+|++||+++|++++ ++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 229 SEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred ChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0001111122221111110001111223456778899999999999999999999987 5443
No 300
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6e-33 Score=305.66 Aligned_cols=278 Identities=21% Similarity=0.280 Sum_probs=202.5
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|..+... ......+.+|+.+++.++ ||||+++++++...+..+...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36889999999999999999999899999999986443 223467889999999995 699999999875543333445
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-CCCeEEcccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFG 858 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~DfG 858 (1003)
.++||||+++ ++.+++..........+++.+++.++.||+.|++|||+. +|+||||+|+||+++. ++.+|++|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 899988765433245689999999999999999999999 9999999999999998 8899999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-C
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-L 936 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~ 936 (1003)
++..+.... .......+++.|+|||.+.+ ..++.++||||+|+++|+|++|..||........... ..... .
T Consensus 157 ~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~ 230 (295)
T cd07837 157 LGRAFSIPV-----KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLH-IFKLLGT 230 (295)
T ss_pred cceecCCCc-----cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHHHhCC
Confidence 997553211 11122356888999998765 4578999999999999999999999875432111100 00000 0
Q ss_pred ch-----hHHHHHHhhccc--CCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PE-----KVMEIVDFALLL--DPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~-----~~~~~i~~~l~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+. ............ .+.......+.....+.+++.+|++++|++||++.|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 000000000000 0000011112345678899999999999999999999865
No 301
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.1e-33 Score=304.90 Aligned_cols=270 Identities=22% Similarity=0.340 Sum_probs=198.0
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
++|++.+.||+|++|+||+|.+..+++.||+|.+..... .....+.+|+++++.++||||+++++++ .+++..+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeEE
Confidence 678999999999999999999988899999999874432 2235677899999999999999999984 4567889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++ +|.+++.... ..+++.+++.++.|+++|++|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 80 lv~e~~~~-~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 151 (291)
T cd07844 80 LVFEYLDT-DLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLAR 151 (291)
T ss_pred EEEecCCC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccccc
Confidence 99999985 9999987642 4688999999999999999999999 99999999999999999999999999986
Q ss_pred ccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh---Cc
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA---LP 937 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~---~~ 937 (1003)
...... .......++..|+|||+..+ ..++.++||||+|+++|||++|+.||................. .+
T Consensus 152 ~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T cd07844 152 AKSVPS-----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTE 226 (291)
T ss_pred ccCCCC-----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCCh
Confidence 532111 11112346889999998765 4578899999999999999999999975432111111111000 00
Q ss_pred hhHHHHHHh---h--cc--cCCCCchhhHHHH--HHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDF---A--LL--LDPGNERAKIEEC--LTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~---~--l~--~~~~~~~~~~~~~--~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+........ . .. ..+.......... .....+++.+|++.+|++||++.|++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 227 ETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000000000 0 00 0000000000011 1566789999999999999999998864
No 302
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.3e-33 Score=302.25 Aligned_cols=240 Identities=24% Similarity=0.404 Sum_probs=187.1
Q ss_pred CeeeeccceEEEEEEECCCC-------ceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 709 NLIGQGSFGFVYRGNLGEDL-------LPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+.||+|+||.||+|.+...+ ..||+|..........+.+.+|+.+++.++|||++++++++. .+...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCV-----CGDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEE-----eCCCcE
Confidence 46899999999999986543 348888886554455578899999999999999999999853 345679
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCC--------eE
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV--------AH 853 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~--------~k 853 (1003)
+||||+++|+|.++++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++. ++
T Consensus 76 lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~ 148 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIK 148 (258)
T ss_pred EEEecCCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEE
Confidence 9999999999999998642 3688999999999999999999999 9999999999999987765 69
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCC-CCCCcccCCcchhhHH
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGR-RPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~-~P~~~~~~~~~~~~~~ 931 (1003)
++|||.+...... ....++..|+|||++.+. .++.++||||+|+++|||++|. .||......
T Consensus 149 l~d~g~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~------- 212 (258)
T cd05078 149 LSDPGISITVLPK---------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ------- 212 (258)
T ss_pred ecccccccccCCc---------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-------
Confidence 9999988654221 124578899999998764 5789999999999999999985 555432111
Q ss_pred HHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 932 VKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.......... .-|. ....++.+++.+||+.+|++||+++++++.|
T Consensus 213 -------~~~~~~~~~~-~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 213 -------KKLQFYEDRH-QLPA-------PKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -------HHHHHHHccc-cCCC-------CCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0111111110 0110 1134678999999999999999999999876
No 303
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=7.7e-33 Score=303.72 Aligned_cols=246 Identities=26% Similarity=0.313 Sum_probs=200.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++ .+...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCe
Confidence 46889999999999999999999899999999986432 23356788999999999999999999984 45677
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++++|.+++.. .+.+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||+
T Consensus 76 ~~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRK-----SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred EEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 8999999999999999987 35689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
+...... .....|++.|+|||.+.+...+.++||||+|+++|+|++|+.||..... ..
T Consensus 148 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------------~~ 205 (290)
T cd05580 148 AKRVKGR--------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--------------IQ 205 (290)
T ss_pred ccccCCC--------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------------HH
Confidence 9765332 2234688999999999888889999999999999999999999865321 01
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
..+.+. ...+ .........+.+++.+||..+|.+|| +++|++++
T Consensus 206 ~~~~~~---~~~~----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 206 IYEKIL---EGKV----RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred HHHHHh---cCCc----cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 111111 1111 00111245678899999999999999 77887764
No 304
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=9.7e-33 Score=302.02 Aligned_cols=256 Identities=21% Similarity=0.308 Sum_probs=196.1
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHH-HHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEA-LKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+..|+.. ++..+|||++++++++ ..+...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~-----~~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGAL-----FREGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEE-----ecCCcE
Confidence 468899999999999999999999999999999874432 223455666665 5666899999999985 346678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||++ |+|.+++...... ...+++..++.++.|++.|++|||++. +++||||||+||+++.++.+||+|||.+
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~ 151 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGIS 151 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 99999997 5899888764322 357899999999999999999999853 7999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCC----CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG----GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
....... ......|+..|+|||.+.+ ..++.++|+||+||++|||++|+.||.......
T Consensus 152 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----------- 214 (283)
T cd06617 152 GYLVDSV------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF----------- 214 (283)
T ss_pred ccccccc------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-----------
Confidence 7653211 1122457889999998765 446889999999999999999999986432110
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
+.....+.......+ ...++..+.+++.+|+..+|++||++.+++++-
T Consensus 215 -~~~~~~~~~~~~~~~------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 262 (283)
T cd06617 215 -QQLKQVVEEPSPQLP------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHP 262 (283)
T ss_pred -HHHHHHHhcCCCCCC------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 111111111111111 112346788999999999999999999999753
No 305
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=8.7e-33 Score=300.47 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=199.0
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc----------cchHHHHHHHHHHHhcCCCCceeEeeeeeecc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK----------GSIKSFVAECEALKNIRHRNLIKIITVCSSID 773 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 773 (1003)
+|.+.+.||+|+||.||+|....+++.||+|.++.... ...+.+.+|+++++.++|||++++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~---- 77 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE---- 77 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe----
Confidence 47788999999999999999988899999998753211 0134678899999999999999999985
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeE
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 853 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~k 853 (1003)
......++||||+++++|.+++... +.+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~ 148 (272)
T cd06629 78 -TTEEYLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICK 148 (272)
T ss_pred -ccCCceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEE
Confidence 4466789999999999999999873 5688999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCCCC--CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHH
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN--VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~ 931 (1003)
++|||+++...... .........|+..|+|||...... ++.++||||+|+++||+++|..||......
T Consensus 149 l~d~~~~~~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------- 218 (272)
T cd06629 149 ISDFGISKKSDDIY---DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI------- 218 (272)
T ss_pred Eeeccccccccccc---cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-------
Confidence 99999997543211 111122345889999999877654 789999999999999999999998642211
Q ss_pred HHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 932 VKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+...+...... .+........++...+.+++.+|+.++|++||+++|++++
T Consensus 219 ------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 219 ------AAMFKLGNKRS--APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ------HHHHHhhcccc--CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00111111000 0000011112345678889999999999999999999875
No 306
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.8e-33 Score=305.66 Aligned_cols=272 Identities=22% Similarity=0.308 Sum_probs=198.5
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
++++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+++++.++|+||+++.+++ .+++.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII-----HTKET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE-----ecCCe
Confidence 4578999999999999999999998889999999987443 23345778999999999999999999985 44667
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|+||++ +++.+++... ...+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||+
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 149 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQH----PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGL 149 (291)
T ss_pred EEEEEeccc-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccc
Confidence 899999996 6888777553 24577888999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-Cc
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-LP 937 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~~ 937 (1003)
++...... .......++..|+|||++.+. .++.++||||+||++|||++|+.||.........+....... .+
T Consensus 150 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~ 224 (291)
T cd07870 150 ARAKSIPS-----QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVP 224 (291)
T ss_pred ccccCCCC-----CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCC
Confidence 97542211 111234578999999998764 578899999999999999999999975433211111111100 01
Q ss_pred hh-HHHHHH-------hhcccCCCCchhhH---HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EK-VMEIVD-------FALLLDPGNERAKI---EECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~-~~~~i~-------~~l~~~~~~~~~~~---~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.. ...... ......+....... ......+.+++.+|+..+|++|||+.|++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 225 TEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred ChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00 000000 00000000000000 0113467788999999999999999999864
No 307
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=9.3e-34 Score=282.66 Aligned_cols=210 Identities=24% Similarity=0.327 Sum_probs=178.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCCC----ceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDL----LPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 775 (1003)
-..|+....||+|.||.||+|...+++ +.+|||.++.++ .+-.....+|+..+++++|||++.+..++. .
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl----~ 98 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFL----S 98 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHh----c
Confidence 357899999999999999999765443 379999997553 344567889999999999999999998853 3
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC----CC
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD----MV 851 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~----~~ 851 (1003)
.+..+++++||.+. +|...|+-++......++...+..++.||+.|+.|||++ =|+|||+||.|||+..+ |.
T Consensus 99 ~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~ 174 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGR 174 (438)
T ss_pred cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCe
Confidence 37889999999999 999999998877677899999999999999999999999 69999999999999877 89
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcc
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
+||+|+|+++.+.+.-.. -.....++.|.+|.|||.+.|. .|+++.||||.|||+.||++-++-|.+.
T Consensus 175 VKIaDlGlaR~~~~plkp--l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 175 VKIADLGLARLFNNPLKP--LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred eEeecccHHHHhhccccc--cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 999999999988653211 2223346789999999998875 6899999999999999999998888654
No 308
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.6e-33 Score=308.20 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=199.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEe
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
.|+....||+|+||.||+|.+..+++.||+|++........+.+.+|+.+++.++|||++++++++ ..++..++|
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~iv 96 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY-----LVGEELWVL 96 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhe-----eeCCeEEEE
Confidence 344456899999999999999888999999999765555567889999999999999999999984 446778999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
+||+++++|.+++.. ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 97 ~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 97 MEFLQGGALTDIVSQ------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred EecCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 999999999998754 3578999999999999999999999 9999999999999999999999999998754
Q ss_pred ccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
.... .......|+..|+|||++.+..++.++||||+||++|||++|+.||...... .....
T Consensus 168 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------------~~~~~ 228 (297)
T cd06659 168 SKDV-----PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--------------QAMKR 228 (297)
T ss_pred cccc-----ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------------HHHHH
Confidence 3211 1122356899999999998888999999999999999999999998643211 00011
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+..... ............+.+++.+|++.+|++||+++|++++
T Consensus 229 ~~~~~~----~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 229 LRDSPP----PKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HhccCC----CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 111100 0011111234567889999999999999999999986
No 309
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.5e-33 Score=299.71 Aligned_cols=238 Identities=24% Similarity=0.446 Sum_probs=188.6
Q ss_pred CeeeeccceEEEEEEECCCC----------ceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 709 NLIGQGSFGFVYRGNLGEDL----------LPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+.||+|+||.||+|.+..++ ..|++|++...... ...|.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46899999999999997665 35888887644333 6789999999999999999999998632 4
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-------C
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-------V 851 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-------~ 851 (1003)
..++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++ .
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~ 146 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPF 146 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCcee
Confidence 4589999999999999998742 2688999999999999999999999 999999999999999887 7
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCCC--CCCccccchhHHHHHHHHHh-CCCCCCcccCCcchh
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG--NVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTL 928 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~ 928 (1003)
+|++|||++..... .....++..|+|||++.+. .++.++||||+|+++|||++ |..||......
T Consensus 147 ~kl~Dfg~a~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~---- 213 (259)
T cd05037 147 IKLSDPGIPITVLS---------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS---- 213 (259)
T ss_pred EEeCCCCccccccc---------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch----
Confidence 99999999976432 1123467789999998776 78899999999999999999 57777553211
Q ss_pred hHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 929 HGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
+...... .....+... ...+.+++.+||..+|++||++.|+++.|
T Consensus 214 ----------~~~~~~~-~~~~~~~~~-------~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 214 ----------EKERFYQ-DQHRLPMPD-------CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ----------hHHHHHh-cCCCCCCCC-------chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0001111 000111110 15788999999999999999999999876
No 310
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.5e-33 Score=303.39 Aligned_cols=268 Identities=22% Similarity=0.307 Sum_probs=199.4
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
|++.+.||+|++|.||+|.+..+++.||+|++.... ....+.+.+|+++++.++|||++++++++ .+++..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~-----~~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVV-----HSENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhhee-----ccCCeEEE
Confidence 677899999999999999998899999999987443 23346788999999999999999999985 45678899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||++ ++|.+++.... ...+++.+++.++.|+++|++|||+. +++||||+|+||+++.++.++++|||.+..
T Consensus 76 v~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSP---LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred EEeccC-cCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence 999995 59999987643 24689999999999999999999999 999999999999999999999999999975
Q ss_pred cccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-Cch-h
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-LPE-K 939 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~~~-~ 939 (1003)
..... .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||........ ........ .+. .
T Consensus 149 ~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~ 222 (283)
T cd07835 149 FGVPV-----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIFRTLGTPDED 222 (283)
T ss_pred cCCCc-----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChH
Confidence 43211 111223468899999987664 568899999999999999999999875422111 11111100 000 0
Q ss_pred H-------HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 940 V-------MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 940 ~-------~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
. .+.........+.............+.+++.+|++++|++||+++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 223 VWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred HhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00000000000111111122334678899999999999999999999864
No 311
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.9e-33 Score=301.84 Aligned_cols=250 Identities=22% Similarity=0.313 Sum_probs=200.0
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEe
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
.|...+.||+|++|.||+|.+..+++.||+|+++.......+.+.+|+.+++.++|||++++++++ ...+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~-----~~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY-----LVGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEE-----EcCCeEEEE
Confidence 355567999999999999999888999999998755555566789999999999999999999984 346678999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
+||+++++|.+++.. +.+++.+++.++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+...
T Consensus 95 ~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 95 MEFLEGGALTDIVTH------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred EeccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 999999999999875 3578899999999999999999999 9999999999999999999999999988654
Q ss_pred ccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
.... .......|+..|+|||...+..++.++||||+|+++|||++|+.||..... ......
T Consensus 166 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--------------~~~~~~ 226 (285)
T cd06648 166 SKEV-----PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--------------LQAMKR 226 (285)
T ss_pred ccCC-----cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--------------HHHHHH
Confidence 3211 112234689999999999888899999999999999999999999864211 001111
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.... .+.. .........+.+++.+||+.+|++||++.+++++
T Consensus 227 ~~~~~--~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 227 IRDNL--PPKL--KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred HHhcC--CCCC--cccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 11110 0110 1111234578899999999999999999999974
No 312
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8.1e-33 Score=297.39 Aligned_cols=247 Identities=32% Similarity=0.486 Sum_probs=197.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
.+|++.+.||+|+||.||+|.. +++.||+|..+.. ...+.+.+|+.++++++|||++++++++. .+..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~------~~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVIL------HNGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEc------CCCcEE
Confidence 5688999999999999999975 5678999998643 23467899999999999999999999853 233689
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++++|.+++.... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 76 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 76 VMELMSKGNLVNFLRTRG---RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARV 149 (254)
T ss_pred EEECCCCCCHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCcccee
Confidence 999999999999998643 34688999999999999999999999 999999999999999999999999999975
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
..... .....+..|+|||.+.++.++.++||||+||++|||++ |+.||..... ....
T Consensus 150 ~~~~~--------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------------~~~~ 207 (254)
T cd05083 150 GSMGV--------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--------------KEVK 207 (254)
T ss_pred ccccC--------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--------------HHHH
Confidence 42211 11234578999999988899999999999999999998 9999865321 1112
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
+.+.......+ ...++..+.+++.+||+.+|++||+++++++.|+.
T Consensus 208 ~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 208 ECVEKGYRMEP------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHhCCCCCCC------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 22222221111 12335677899999999999999999999998763
No 313
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=9.3e-33 Score=307.41 Aligned_cols=278 Identities=20% Similarity=0.264 Sum_probs=203.2
Q ss_pred cCCccCeeeeccceEEEEEEECC--CCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGE--DLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+|++.++||+|+||.||+|.+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLE---HADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeC---CCCc
Confidence 47888999999999999999987 78999999998633 4445678899999999999999999999643 2236
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC----CCCeEE
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH----DMVAHV 854 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~----~~~~kl 854 (1003)
..++||||+++ ++.+++..........+++..++.++.|++.|++|||+. +|+||||||+||+++. ++.+|+
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl 153 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKI 153 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEE
Confidence 78999999975 788888765444345789999999999999999999999 9999999999999999 899999
Q ss_pred cccccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcch------
Q 001858 855 SDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLT------ 927 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~------ 927 (1003)
+|||++......... ........++..|+|||++.+. .++.++||||+||++|+|++|+.||.........
T Consensus 154 ~Dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 231 (316)
T cd07842 154 GDLGLARLFNAPLKP--LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQR 231 (316)
T ss_pred CCCccccccCCCccc--ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHH
Confidence 999999865432211 1112235678999999987664 5789999999999999999999999765433200
Q ss_pred --hhHHHHhhC---ch---------hHHHHHHhhcccCCC-Cchhh-HH---HHHHHHHHHHhhccccCCCCCCCHHHHH
Q 001858 928 --LHGFVKMAL---PE---------KVMEIVDFALLLDPG-NERAK-IE---ECLTAVVRIGVLCSMESPSERIHMADAV 988 (1003)
Q Consensus 928 --~~~~~~~~~---~~---------~~~~~i~~~l~~~~~-~~~~~-~~---~~~~~l~~l~~~cl~~~p~~RPs~~ev~ 988 (1003)
....+...- +. +.....+........ ..... .+ .....+.+++.+|++++|++||++.|++
T Consensus 232 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil 311 (316)
T cd07842 232 DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEAL 311 (316)
T ss_pred HHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 000000000 00 000000000000000 00000 00 2335688999999999999999999998
Q ss_pred HH
Q 001858 989 KN 990 (1003)
Q Consensus 989 ~~ 990 (1003)
++
T Consensus 312 ~~ 313 (316)
T cd07842 312 EH 313 (316)
T ss_pred cC
Confidence 65
No 314
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.4e-32 Score=298.97 Aligned_cols=264 Identities=27% Similarity=0.415 Sum_probs=200.6
Q ss_pred CCccCeeeeccceEEEEEEEC---CCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC-CC
Q 001858 705 FSLSNLIGQGSFGFVYRGNLG---EDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG-DD 778 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 778 (1003)
|++.+.||+|+||+||+|.+. .+++.||||++.... ....+++.+|++++++++|||++++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 667889999999999999864 356889999987432 234567889999999999999999999864422111 12
Q ss_pred ceEEeeecccCCCHHHHHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQ-VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
..++++||+++|+|.+++...... ....+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 357899999999999988643211 123578999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
|.++......... ......++..|++||...+..++.++||||+||++|||++ |+.||......
T Consensus 158 g~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~------------ 222 (273)
T cd05074 158 GLSKKIYSGDYYR---QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS------------ 222 (273)
T ss_pred cccccccCCccee---cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH------------
Confidence 9998653322111 1112345678999999988889999999999999999999 88888653221
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
.....+...-... ........+.+++.+|++.+|++||++.|+.+.|+++
T Consensus 223 --~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 223 --EIYNYLIKGNRLK------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --HHHHHHHcCCcCC------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111111100000 0012346789999999999999999999999999875
No 315
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8e-33 Score=300.24 Aligned_cols=255 Identities=25% Similarity=0.367 Sum_probs=199.9
Q ss_pred cCCccCeeeeccceEEEEEEECC-CCceEEEEEecccc----------ccchHHHHHHHHHHHh-cCCCCceeEeeeeee
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGE-DLLPVAVKVINLKQ----------KGSIKSFVAECEALKN-IRHRNLIKIITVCSS 771 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 771 (1003)
.|++.+.||+|+||.||+|.+.. .++.+|+|.+.... .....++.+|+.++.+ ++|||++++++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-- 78 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF-- 78 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE--
Confidence 47888999999999999999987 67889999886322 2234567788888875 6999999999985
Q ss_pred cccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccCCCCceEeCCCC
Q 001858 772 IDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDM 850 (1003)
Q Consensus 772 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~ 850 (1003)
.+++..++||||+++++|.+++...... ...+++.+++.++.|++.|+.|||+ . +++|+||+|+||+++.++
T Consensus 79 ---~~~~~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~ 151 (269)
T cd08528 79 ---LENDRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDD 151 (269)
T ss_pred ---ccCCeEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCC
Confidence 4567889999999999999998653222 4568999999999999999999996 5 899999999999999999
Q ss_pred CeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhH
Q 001858 851 VAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHG 930 (1003)
Q Consensus 851 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~ 930 (1003)
.+|++|||.+....... ......|+..|+|||...+..++.++||||+|+++|||++|+.||......
T Consensus 152 ~~~l~dfg~~~~~~~~~------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~------ 219 (269)
T cd08528 152 KVTITDFGLAKQKQPES------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML------ 219 (269)
T ss_pred cEEEecccceeeccccc------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH------
Confidence 99999999997653321 122356889999999999888999999999999999999999998642110
Q ss_pred HHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 931 FVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 931 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
........... . +.. .......+.+++.+||+.+|++||++.|+.++++
T Consensus 220 -------~~~~~~~~~~~-~-~~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 220 -------SLATKIVEAVY-E-PLP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -------HHHHHHhhccC-C-cCC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00111111111 1 100 1123456888999999999999999999998875
No 316
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.4e-32 Score=299.64 Aligned_cols=249 Identities=25% Similarity=0.371 Sum_probs=199.0
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcC---CCCceeEeeeeeecccCCCCc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIR---HRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++ |||++++++++ .++..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~-----~~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSY-----LKGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeee-----eeCCE
Confidence 4778899999999999999998899999999987542 334567889999999996 99999999985 34667
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++++|.++++. +.+++..++.++.|++.|++|||+. +|+||||+|+||+++.++.++++|||+
T Consensus 77 ~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~ 147 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGV 147 (277)
T ss_pred EEEEEecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCc
Confidence 8999999999999999864 2688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
+....... .......|+..|+|||...++ .++.++||||+|+++|+|++|+.||........
T Consensus 148 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------------ 210 (277)
T cd06917 148 AALLNQNS-----SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------------ 210 (277)
T ss_pred eeecCCCc-----cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------------
Confidence 98764322 112234688999999987654 468899999999999999999999975322100
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...+.. ..+... ........+.+++.+||+.+|++||++.|++++
T Consensus 211 --~~~~~~---~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 211 --MMLIPK---SKPPRL--EDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred --hhcccc---CCCCCC--CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 000000 001000 001134578899999999999999999999875
No 317
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.8e-32 Score=295.60 Aligned_cols=254 Identities=20% Similarity=0.354 Sum_probs=185.8
Q ss_pred CeeeeccceEEEEEEECCC--CceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGED--LLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
+.||+|+||+||+|..... ...+++|.++... ....+.+.+|+.+++.++||||+++++++. +....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-----EAIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-----CCCccEEEEe
Confidence 3699999999999976432 3456677765433 234578999999999999999999999853 4567799999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
|+++|+|.+++++.... ....++..++.++.|+++|++|||+. +++||||||+||+++.++.+|++|||++.....
T Consensus 76 ~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 76 YCELGDLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYK 151 (268)
T ss_pred cCCCCcHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCc
Confidence 99999999999874322 34567778889999999999999999 999999999999999999999999999864322
Q ss_pred CCccccCcccccccccccccCccccCC-------CCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCc
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMG-------GNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
... ........++..|+|||+... ..++.++|||||||++|||++ |..||......
T Consensus 152 ~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------------- 215 (268)
T cd05086 152 EDY---IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR------------- 215 (268)
T ss_pred chh---hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-------------
Confidence 111 111123567889999998743 245788999999999999997 56677543211
Q ss_pred hhHHHHHHhhcc--cCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 938 EKVMEIVDFALL--LDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 938 ~~~~~~i~~~l~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+.....+..... .+|... ......+.+++..|| .+|++||+++|+++.|.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 216 EVLNHVIKDQQVKLFKPQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHhhcccccCCCccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 011111111110 111111 113456777888999 57999999999998763
No 318
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.5e-33 Score=298.91 Aligned_cols=249 Identities=26% Similarity=0.356 Sum_probs=202.5
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
+|++.++||.|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||++++++ +.++...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-----~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYS-----FQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHh-----hcCCCeE
Confidence 4788999999999999999999889999999997433 2346789999999999999999999987 4567788
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++|+||+++++|.+++... ..+++.++..++.|+++|++|||+. +++|+||+|+||++++++.++++|||.+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~ 147 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIA 147 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccc
Confidence 9999999999999999863 4688999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
....... ......|+..|+|||...+..++.++|+||+|+++|+|++|+.||...... .. ...
T Consensus 148 ~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~---------~~~ 210 (258)
T cd05578 148 TKVTPDT------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IR---------DQI 210 (258)
T ss_pred cccCCCc------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HH---------HHH
Confidence 7653321 122355888999999998888999999999999999999999998764321 00 111
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH--HHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM--ADAVK 989 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~--~ev~~ 989 (1003)
...... . ...........+.+++.+||+.+|.+||++ +|+.+
T Consensus 211 ~~~~~~---~----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 211 RAKQET---A----DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHhcc---c----cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 111111 0 111112334678899999999999999999 76654
No 319
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.5e-32 Score=299.36 Aligned_cols=249 Identities=26% Similarity=0.357 Sum_probs=200.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+-|++.+.||+|+||.||+|.+..+++.||+|+..... ....+.+.+|++++++++|||++++++++ .++...+
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 78 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKLW 78 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEE-----EeCCeEE
Confidence 34778899999999999999998889999999986433 23456788999999999999999999985 4466789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.
T Consensus 79 lv~e~~~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 79 IIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred EEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 99999999999999864 3578999999999999999999999 99999999999999999999999999987
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......++..|+|||...+..++.++||||+||++|+|++|..||...... ...
T Consensus 150 ~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------------~~~ 210 (277)
T cd06641 150 QLTDTQ-----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--------------KVL 210 (277)
T ss_pred ecccch-----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--------------HHH
Confidence 653321 1112345788999999998888999999999999999999999998643211 011
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+... ..+ .....+...+.+++.+||+.+|++||++++++++
T Consensus 211 ~~~~~~--~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 211 FLIPKN--NPP----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHhcC--CCC----CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111100 001 1112234567889999999999999999999986
No 320
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9.2e-33 Score=302.99 Aligned_cols=257 Identities=22% Similarity=0.280 Sum_probs=195.2
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|...+.||+|+||+||++.+..+++.||+|.+.... ......+.+|+.++.++. ||||+++++++ ..+...+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~-----~~~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGAL-----FREGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEE-----ecCCcEE
Confidence 4566788999999999999999999999999987443 234567889999999996 99999999985 3456778
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
++|||+.. ++.++...........+++..+..++.|++.|++|||+.. +++||||||+||+++.++.+||+|||+++
T Consensus 80 ~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 156 (288)
T cd06616 80 ICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISG 156 (288)
T ss_pred EEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhH
Confidence 99999865 6655443211111357899999999999999999999732 89999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCC---CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG---NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
...... ......|+..|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 157 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------------- 215 (288)
T cd06616 157 QLVDSI------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--------------- 215 (288)
T ss_pred HhccCC------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch---------------
Confidence 653221 11223578899999998776 688999999999999999999999865320
Q ss_pred hHHHHHHhhccc-CCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLL-DPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+.+...... .+.........+...+.+++.+||+.+|++||+++|++++
T Consensus 216 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 216 -VFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -HHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111111111 1111111112345678899999999999999999999986
No 321
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-33 Score=305.03 Aligned_cols=201 Identities=28% Similarity=0.423 Sum_probs=178.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.+.|.+.+.||+|.|+.|.+|++..++..||||.+++..- ...+.+.+|+++++.++|||||+++.+ .+....
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v-----~~t~~~ 129 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSV-----IETEAT 129 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeee-----eeecce
Confidence 5679999999999999999999999999999999985542 223558899999999999999999998 556788
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.|+||||+.+|.+++++.++ +...+..+..++.|+.+|++|||++ .|||||+|++||+++.+.++||+|||+
T Consensus 130 lylV~eya~~ge~~~yl~~~-----gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKH-----GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred eEEEEEeccCchhHHHHHhc-----ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecccc
Confidence 89999999999999999984 4566688999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCC-CccccchhHHHHHHHHHhCCCCCCcc
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNV-SLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
+..+... .....++|++.|+|||++.+.++ ++++|+||+|+++|.|++|..||++.
T Consensus 202 S~~~~~~------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 202 STFFDYG------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred ceeeccc------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 9887533 33345789999999999998876 58899999999999999999999863
No 322
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.6e-32 Score=299.04 Aligned_cols=257 Identities=24% Similarity=0.316 Sum_probs=206.8
Q ss_pred HHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
...+.|+..+.+|+|++|.||+|.+..++..||+|+++.... ..+.+.+|++.++.++|+|++++++++. ....
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYL-----VGDE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEE-----ECCE
Confidence 346678899999999999999999998889999999975444 4578899999999999999999999853 4577
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|+||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++|+|++|+||+++.++.++|+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccch
Confidence 899999999999999998742 3789999999999999999999998 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
+....... .......++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... .
T Consensus 163 ~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-------------~ 224 (286)
T cd06614 163 AAQLTKEK-----SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-------------A 224 (286)
T ss_pred hhhhccch-----hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-------------H
Confidence 87553221 11123457889999999988889999999999999999999999986432110 0
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
........ + ........+...+.+++.+|++.+|.+||++.+++++-.
T Consensus 225 ~~~~~~~~----~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 225 LFLITTKG----I-PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred HHHHHhcC----C-CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 11111111 1 111112224567889999999999999999999987543
No 323
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=9.8e-33 Score=302.83 Aligned_cols=271 Identities=23% Similarity=0.336 Sum_probs=201.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++|+||+++++++. .++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-----RKGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-----ECCEE
Confidence 36889999999999999999999889999999987432 334578899999999999999999999853 46678
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||++++.+..+... ...+++.+++.++.|++.|++|||+. +++|||++|+||+++.++.+||+|||++
T Consensus 76 ~iv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~ 147 (288)
T cd07833 76 YLVFEYVERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFA 147 (288)
T ss_pred EEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecc
Confidence 999999998777665544 34589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhh-HHHHhhCch
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLH-GFVKMALPE 938 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~-~~~~~~~~~ 938 (1003)
........ .......++..|+|||+..+. .++.++||||+|+++|+|++|+.||......+.... .......+.
T Consensus 148 ~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (288)
T cd07833 148 RALRARPA----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPP 223 (288)
T ss_pred cccCCCcc----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 76543221 122235678899999998888 788999999999999999999999875322110000 000000111
Q ss_pred hHHHHHHhh--c----ccCCCCchh----hHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFA--L----LLDPGNERA----KIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~--l----~~~~~~~~~----~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
......... . ...+..... ....+...+.+++.+||..+|++||++++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 224 SHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred HHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 111100000 0 000000000 011235778999999999999999999999864
No 324
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3e-32 Score=307.56 Aligned_cols=272 Identities=21% Similarity=0.218 Sum_probs=203.2
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecc-cCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSID-FKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 777 (1003)
..++|++.+.||+|+||.||+|.+..+++.||+|.+... .....+.+.+|+.++++++||||+++++++.... +.+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999999999999999998632 2333467788999999999999999999864322 2333
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++ +|.+.+.. .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 567999999965 88888864 278889999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh--h
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM--A 935 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~--~ 935 (1003)
|+++...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||......+ .+...... .
T Consensus 163 g~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 235 (353)
T cd07850 163 GLARTAGTSF------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-QWNKIIEQLGT 235 (353)
T ss_pred ccceeCCCCC------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCC
Confidence 9997653321 1123457899999999999999999999999999999999999997543211 11111100 0
Q ss_pred CchhHHHHHH----hhcccCCCCch-----------------hhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 LPEKVMEIVD----FALLLDPGNER-----------------AKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ~~~~~~~~i~----~~l~~~~~~~~-----------------~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+++..+... ......+..+. .........+.+++.+|++.+|++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 236 PSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred CCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111 11111110000 0011234567899999999999999999999976
No 325
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.8e-32 Score=307.63 Aligned_cols=276 Identities=21% Similarity=0.315 Sum_probs=203.1
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 777 (1003)
..++|++.+.||+|+||.||+|.+..+++.||+|.+... .......+.+|+.+++++ +||||+++++++.. .+.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 356789999999999999999999888999999988532 223345677899999999 99999999998643 234
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+++ +|.+++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~lv~e~~~~-~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~ 151 (337)
T cd07852 82 KDIYLVFEYMET-DLHAVIRA------NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADF 151 (337)
T ss_pred ceEEEEeccccc-CHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeec
Confidence 567999999975 99998875 2678889999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh--
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM-- 934 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~-- 934 (1003)
|.+...................|+..|+|||.+.+ ..++.++||||+|+++|+|++|+.||......+. .......
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~ 230 (337)
T cd07852 152 GLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIG 230 (337)
T ss_pred cchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhC
Confidence 99986643321111112233568999999998755 4578899999999999999999999965432211 1111110
Q ss_pred hCch-hH--------HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 935 ALPE-KV--------MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 935 ~~~~-~~--------~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+. .+ ....+....................+.+++.+||+.+|++||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000 00 11111000011101111112245678999999999999999999999986
No 326
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-33 Score=277.93 Aligned_cols=272 Identities=21% Similarity=0.313 Sum_probs=206.2
Q ss_pred HHHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecc
Q 001858 695 YAELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSID 773 (1003)
Q Consensus 695 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 773 (1003)
+.+..+-++ +.||+|+|+.|--+....++..||||++.+.....+.+..+|++++... .|+||+++++|
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief----- 144 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF----- 144 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH-----
Confidence 445544443 6799999999999999999999999999877666788999999999999 59999999999
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC---
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--- 850 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~--- 850 (1003)
|+++...|+|||.|.||+|..+|++ ...+++.++.++..+|+.|+.|||.+ ||.|||+||+|||-....
T Consensus 145 FEdd~~FYLVfEKm~GGplLshI~~-----~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vs 216 (463)
T KOG0607|consen 145 FEDDTRFYLVFEKMRGGPLLSHIQK-----RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVS 216 (463)
T ss_pred hcccceEEEEEecccCchHHHHHHH-----hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcC
Confidence 7888899999999999999999998 45799999999999999999999999 999999999999997544
Q ss_pred CeEEcccccccccccC-Cc-cccCcccccccccccccCccccC-----CCCCCccccchhHHHHHHHHHhCCCCCCcccC
Q 001858 851 VAHVSDFGLAKFLFDR-PI-QETSSSSIGIKGTVGYVAPEYGM-----GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFN 923 (1003)
Q Consensus 851 ~~kl~DfG~a~~~~~~-~~-~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~ell~g~~P~~~~~~ 923 (1003)
.+|||||.+..-+.-. +. ......-...+|+..|||||+.. ...|+.+.|.||+|||+|-|++|.+||.+.-.
T Consensus 217 PvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg 296 (463)
T KOG0607|consen 217 PVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG 296 (463)
T ss_pred ceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence 5899999988543211 11 11222233567999999999743 23688999999999999999999999988765
Q ss_pred CcchhhHHHHhhC----chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 924 DGLTLHGFVKMAL----PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 924 ~~~~~~~~~~~~~----~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+-.+. +... .+.+.+-|...-..-|... +...+.+..+++...+..++.+|.++.+++.+
T Consensus 297 ~dCGWd---rGe~Cr~CQ~~LFesIQEGkYeFPdkd---WahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 297 ADCGWD---RGEVCRVCQNKLFESIQEGKYEFPDKD---WAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CcCCcc---CCCccHHHHHHHHHHHhccCCcCChhh---hHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 433222 2221 1223333333333333222 22333444455555566788888888887763
No 327
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5e-32 Score=299.80 Aligned_cols=249 Identities=25% Similarity=0.317 Sum_probs=197.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
..|++.+.||+|+||+||+|++..+++.||+|.+..... ...+++.+|+++++.++|||++++.+++. +++.
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-----~~~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-----REHT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-----eCCe
Confidence 568889999999999999999988899999999864332 23457889999999999999999999964 4566
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|+||++ |++.+++... ...+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||+
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~----~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~ 161 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVH----KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGS 161 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCc
Confidence 799999997 4888877653 24589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccC---CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM---GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
+...... ....++..|+|||++. ...++.++||||||+++|||++|+.||........
T Consensus 162 ~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~---------- 222 (307)
T cd06607 162 ASLVSPA---------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---------- 222 (307)
T ss_pred ceecCCC---------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH----------
Confidence 8754221 1245788999999874 45688899999999999999999999865321100
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
.... .....+.. ....+...+..++.+||+.+|++||++.+++.+..
T Consensus 223 ---~~~~---~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 223 ---LYHI---AQNDSPTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred ---HHHH---hcCCCCCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0000 00011110 11234567889999999999999999999998643
No 328
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.9e-32 Score=294.83 Aligned_cols=255 Identities=22% Similarity=0.297 Sum_probs=200.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-----ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-----KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 777 (1003)
.+|++.+.||+|+||.||+|++..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~---~~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD---PEE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc---CCC
Confidence 47899999999999999999999899999999875321 2335688999999999999999999998532 224
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++|+||+++++|.+++.. .+.+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+||
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~df 150 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKA-----YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 150 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcc
Confidence 567899999999999999976 34578999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
|+++...... ..........|+..|+|||...+..++.++|+||+||++|+|++|+.||.....
T Consensus 151 g~~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------------- 214 (264)
T cd06653 151 GASKRIQTIC--MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-------------- 214 (264)
T ss_pred cccccccccc--ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH--------------
Confidence 9997653211 111112235689999999999888899999999999999999999999864311
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.....+...... +........+.+.+++.+|++ +|.+||++.++++|
T Consensus 215 --~~~~~~~~~~~~---~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 215 --MAAIFKIATQPT---KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred --HHHHHHHHcCCC---CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 111111111111 111123345678889999999 57999999998765
No 329
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.6e-32 Score=291.84 Aligned_cols=251 Identities=27% Similarity=0.392 Sum_probs=204.2
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEe
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
+|++.+.||+|++|.||+|.+..+++.+++|++........+.+.+|++++++++||+++++++++ ..+...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY-----LKKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEE-----ecCCeEEEE
Confidence 478889999999999999999888999999999765555668899999999999999999999985 445778999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
+||+++++|.+++.... ..+++.++..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.+...
T Consensus 76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 148 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148 (253)
T ss_pred EecCCCCcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccc
Confidence 99999999999998742 4689999999999999999999998 9999999999999999999999999999765
Q ss_pred ccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
..... .....++..|+|||...+..++.++||||+|+++|+|++|+.||...... .....
T Consensus 149 ~~~~~------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------------~~~~~ 208 (253)
T cd05122 149 SDTKA------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--------------KALFK 208 (253)
T ss_pred ccccc------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--------------HHHHH
Confidence 43221 22356889999999998888999999999999999999999998653211 00001
Q ss_pred HHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 944 VDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
... ... ........+...+.+++.+|++.+|++||++.|++++
T Consensus 209 ~~~---~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 209 IAT---NGP-PGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HHh---cCC-CCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 100 0111111124568899999999999999999999875
No 330
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.3e-32 Score=300.63 Aligned_cols=271 Identities=22% Similarity=0.273 Sum_probs=199.9
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.++++++||||+++++++.. .+....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---~~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVG---SNLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEe---cCCCcE
Confidence 578899999999999999999998899999999974432 223467789999999999999999998643 223788
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++|+||+++ +|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+|++|||++
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~ 153 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLA 153 (293)
T ss_pred EEEehhcCc-CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCce
Confidence 999999975 9999987642 3689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh---hC
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM---AL 936 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~---~~ 936 (1003)
....... .......++..|+|||.+.+. .++.++|+||+|+++|||++|+.||......+. ....... ..
T Consensus 154 ~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~ 227 (293)
T cd07843 154 REYGSPL-----KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIFKLLGTPT 227 (293)
T ss_pred eeccCCc-----cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCc
Confidence 7654321 111224578899999987664 468899999999999999999999975432111 0000000 00
Q ss_pred chhHHHHHH------hhccc-CCCCchhhHHH--HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 937 PEKVMEIVD------FALLL-DPGNERAKIEE--CLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 937 ~~~~~~~i~------~~l~~-~~~~~~~~~~~--~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+..+..... ..... .+......... ....+.+++.+|++.+|++||++.|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 228 EKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000000 00000 00000001111 25667899999999999999999999865
No 331
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.7e-32 Score=300.89 Aligned_cols=278 Identities=20% Similarity=0.303 Sum_probs=200.6
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc---CC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF---KG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 776 (1003)
.++|++.++||+|+||.||+|++..+++.||||.+.... ......+.+|++++++++||||+++++++..... ..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999999999999999886432 2223466789999999999999999998765322 12
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
....++||||+.+ ++.+++... ...+++.+++.++.|++.|++|||++ +++|+||||+||+++.++.+||+|
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECc
Confidence 3456999999975 888888653 24689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcc-hhhHHHHh
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGL-TLHGFVKM 934 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~-~~~~~~~~ 934 (1003)
||.+..+....... ........++..|+|||.+.+. .++.++||||+|+++|||++|+.||........ ........
T Consensus 163 fg~~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T cd07865 163 FGLARAFSLSKNSK-PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG 241 (310)
T ss_pred CCCcccccCCcccC-CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 99998664322111 1112234578899999987664 468899999999999999999999865322110 00000000
Q ss_pred hCchhHH------HHHHhhcccCCCCchhhHH------HHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 935 ALPEKVM------EIVDFALLLDPGNERAKIE------ECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 935 ~~~~~~~------~~i~~~l~~~~~~~~~~~~------~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+++.. +..+.. ..+........ .....+.+++.+|++.+|++||+++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 242 SITPEVWPGVDKLELFKKM--ELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CCChhhcccccchhhhhhc--cCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 1111100 000000 00111100000 012456789999999999999999999865
No 332
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.4e-32 Score=299.12 Aligned_cols=270 Identities=23% Similarity=0.337 Sum_probs=201.7
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
+|++.++||+|++|.||+|++..+++.||||.++.... ...+.+.+|++++++++|||++++++++ .+.+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI-----HTENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeE-----eeCCcEEE
Confidence 48889999999999999999998999999999875432 3356778899999999999999999985 44567899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+++ +|.+++..... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++..
T Consensus 76 v~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~ 149 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARA 149 (284)
T ss_pred EEecCCc-cHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhh
Confidence 9999985 89998876432 34689999999999999999999999 999999999999999999999999999975
Q ss_pred cccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh---Cch
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA---LPE 938 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~---~~~ 938 (1003)
..... .......++..|+|||++.+. .++.++||||+||++|+|++|+.||......+... ...... ...
T Consensus 150 ~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 223 (284)
T cd07836 150 FGIPV-----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLL-KIFRIMGTPTES 223 (284)
T ss_pred hcCCc-----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHH-HHHHHhCCCChh
Confidence 43211 111224578899999987664 56889999999999999999999997643321111 111110 011
Q ss_pred hHHHHHHhh-ccc-CCCCc----hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFA-LLL-DPGNE----RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~-l~~-~~~~~----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+....... ... .+... ....+.....+.+++.+|++.+|++||+++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 224 TWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111111000 000 00000 11112335678899999999999999999999864
No 333
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.5e-32 Score=294.26 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=200.0
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+++++.++|+|++++++++ ......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 4788899999999999999999999999999986432 23446788999999999999999999984 4567789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-CeEEcccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLA 860 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~DfG~a 860 (1003)
+|+||+++++|.+++.... ...+++..+..++.|+++|++|||+. +++|+||||+||++++++ .+|++|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~ 149 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIA 149 (257)
T ss_pred EEEecCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccc
Confidence 9999999999999997643 33578999999999999999999999 999999999999999886 4699999999
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhH
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
....+.. .......|++.|+|||+..+..++.++||||+|+++|||++|+.||...... . ..
T Consensus 150 ~~~~~~~-----~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~--------~~ 211 (257)
T cd08225 150 RQLNDSM-----ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-----Q--------LV 211 (257)
T ss_pred hhccCCc-----ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----H--------HH
Confidence 7653321 1112245889999999988888999999999999999999999998643211 1 11
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.......... ........+.+++.+|+..+|++||++.|++++
T Consensus 212 ~~~~~~~~~~-------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 212 LKICQGYFAP-------ISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHhcccCCC-------CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1111111110 011224568889999999999999999999875
No 334
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.3e-32 Score=292.40 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=204.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|+++++.++|||++++.+.+ ......+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~-----~~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESF-----EEKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEE-----ecCCEEE
Confidence 57888999999999999999998899999999975433 4567889999999999999999999984 3457889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++...... ...+++.++..++.++++|++|||+. +++|+||+|+||+++.++.++++|||.+.
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~ 151 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKE-GKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISK 151 (258)
T ss_pred EEEEecCCCcHHHHHHHhhcc-CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCcccee
Confidence 999999999999999875321 36789999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
...... .......|++.|+|||...+..++.++||||+|+++|+|++|+.||......
T Consensus 152 ~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----------------- 209 (258)
T cd08215 152 VLSSTV-----DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL----------------- 209 (258)
T ss_pred ecccCc-----ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH-----------------
Confidence 653321 1122346889999999988888999999999999999999999998653211
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+............. .......+.+++.+|+..+|++||++.|++++
T Consensus 210 ~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 210 ELALKILKGQYPPI---PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111111111111 11335678899999999999999999999864
No 335
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=9.4e-32 Score=294.86 Aligned_cols=272 Identities=22% Similarity=0.310 Sum_probs=200.3
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhc---CCCCceeEeeeeeecccCCCCc
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNI---RHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
|++.+.||+|+||.||+|++..+++.||+|.++.... .....+.+|+.+++++ +|||++++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778899999999999999988899999999974322 2234667788877766 5999999999976544433445
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.+++|||+.+ +|.+++.... ...+++.+++.++.|+++|++|||+. +++|+||+|+||+++.++.+|++|||.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP---KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCc
Confidence 8999999975 8999887643 23689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-Cch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-LPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~~~ 938 (1003)
+..+.... ......++..|+|||++.+..++.++|+||+||++|||++|+.||......+ ....+.... .+.
T Consensus 154 ~~~~~~~~------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 226 (287)
T cd07838 154 ARIYSFEM------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVIGLPS 226 (287)
T ss_pred ceeccCCc------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHcCCCC
Confidence 97653221 1122347889999999999999999999999999999999999987533211 111111100 000
Q ss_pred hHHHH-----HHhhcccC-CCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEI-----VDFALLLD-PGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~-----i~~~l~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..... ........ +........+....+.+++.+||+.+|++||++.|++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00000 00000000 001112223445678899999999999999999999864
No 336
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.3e-32 Score=293.62 Aligned_cols=251 Identities=24% Similarity=0.297 Sum_probs=194.5
Q ss_pred HHHHHHhccCCccCee--eeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeec
Q 001858 696 AELNKATNEFSLSNLI--GQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSI 772 (1003)
Q Consensus 696 ~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 772 (1003)
.+.....++|++.+.+ |+|+||.||++....+++.+|+|.+........ |+.....+ +|||++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~--- 78 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSV--- 78 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEE---
Confidence 4444556778887777 999999999999999999999999864322211 22222223 799999999985
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-C
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-V 851 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~ 851 (1003)
..++..++||||+++++|.+++... ..+++.+++.++.|+++|++|||+. +++||||||+||+++.++ .
T Consensus 79 --~~~~~~~iv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 148 (267)
T PHA03390 79 --TTLKGHVLIMDYIKDGDLFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDR 148 (267)
T ss_pred --ecCCeeEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCe
Confidence 3456789999999999999999863 3789999999999999999999999 999999999999999988 9
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHH
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~ 931 (1003)
++++|||++...... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||............+
T Consensus 149 ~~l~dfg~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T PHA03390 149 IYLCDYGLCKIIGTP---------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESL 219 (267)
T ss_pred EEEecCccceecCCC---------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHH
Confidence 999999998754321 12458899999999998899999999999999999999999997543322111111
Q ss_pred HHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-HHHHHHH
Q 001858 932 VKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-MADAVKN 990 (1003)
Q Consensus 932 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-~~ev~~~ 990 (1003)
. .. .... ..........+.+++.+|++++|.+||+ ++|++++
T Consensus 220 ---------~---~~-~~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 220 ---------L---KR-QQKK----LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred ---------H---Hh-hccc----CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 1 11 1110 1111234567889999999999999996 5988864
No 337
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.9e-32 Score=304.57 Aligned_cols=272 Identities=19% Similarity=0.254 Sum_probs=196.4
Q ss_pred Ceeeec--cceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQG--SFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
..||+| +||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++ ..++..++|+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~-----~~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVF-----TTGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeE-----ecCCceEEEE
Confidence 456666 99999999999899999999987433 23357789999999999999999999995 4466789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+.++++.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+....
T Consensus 79 e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 79 PFMAYGSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLV 152 (328)
T ss_pred ecccCCCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence 9999999999998753 23588999999999999999999999 99999999999999999999999998764432
Q ss_pred cCCcccc--CcccccccccccccCccccCCC--CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-----
Q 001858 865 DRPIQET--SSSSIGIKGTVGYVAPEYGMGG--NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA----- 935 (1003)
Q Consensus 865 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~----- 935 (1003)
....... ........++..|+|||++.+. .++.++||||+||++|||++|+.||.................
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLD 232 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcc
Confidence 2111110 0111112356779999998764 478899999999999999999999976532211111100000
Q ss_pred ---CchhHHHH--------------HHh-h---cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 936 ---LPEKVMEI--------------VDF-A---LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 936 ---~~~~~~~~--------------i~~-~---l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.+...... ... . .......+.+....+...+.+++.+||+.+|++|||+.|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred ccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 00000000 000 0 00000011222345667889999999999999999999998753
No 338
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.3e-32 Score=306.02 Aligned_cols=280 Identities=20% Similarity=0.218 Sum_probs=208.6
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++.+++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999998889999999987543 34457899999999999999999999986543322334789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+++ +|.+++.. ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++++|||++.
T Consensus 81 lv~e~~~~-~l~~~l~~-----~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 81 IVTELMET-DLHKVIKS-----PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred EEecchhh-hHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 99999985 89998876 34789999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh------
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM------ 934 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~------ 934 (1003)
........ ........++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+. .......
T Consensus 152 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~ 228 (330)
T cd07834 152 GVDPDEDE--KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLIVEVLGTPSE 228 (330)
T ss_pred eecccccc--cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHhcCCCCh
Confidence 76443210 0112234578899999998887 789999999999999999999999976532111 0000000
Q ss_pred -----hCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHH
Q 001858 935 -----ALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN--LCAAR 995 (1003)
Q Consensus 935 -----~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~--L~~~~ 995 (1003)
.......+.+...-...+.............+.+++.+||+.+|++||++++++++ ++..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 00111111111100000000111122345678899999999999999999999986 44443
No 339
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.5e-32 Score=299.25 Aligned_cols=271 Identities=24% Similarity=0.312 Sum_probs=197.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
++|++.+.||+|++|+||+|++..+++.||+|.+..... ...+.+.+|++++++++|||++++++++ .+....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV-----HSEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEE-----ecCCeE
Confidence 468899999999999999999998999999999864332 3346788999999999999999999985 456788
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-CCCeEEccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGL 859 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~DfG~ 859 (1003)
++||||+++ ++.+++.... ....++..++.++.||+.|++|||++ +++||||+|+||+++. ++.+|++|||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~ 149 (294)
T PLN00009 77 YLVFEYLDL-DLKKHMDSSP---DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGL 149 (294)
T ss_pred EEEEecccc-cHHHHHHhCC---CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccccc
Confidence 999999964 8888886533 23467888999999999999999999 9999999999999985 55799999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc-
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP- 937 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~- 937 (1003)
+....... .......+++.|+|||++.+. .++.++||||+||++|+|++|+.||......+...........+
T Consensus 150 ~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~ 224 (294)
T PLN00009 150 ARAFGIPV-----RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPN 224 (294)
T ss_pred ccccCCCc-----cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 97543211 111223578899999987664 57889999999999999999999997543211111000000000
Q ss_pred hhH-------HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 938 EKV-------MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 938 ~~~-------~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.. .+.........+.............+.+++.+|++.+|++||++.+++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 225 EETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00000000000000011112234567899999999999999999999975
No 340
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.1e-32 Score=295.87 Aligned_cols=244 Identities=21% Similarity=0.267 Sum_probs=187.8
Q ss_pred eeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHh---cCCCCceeEeeeeeecccCCCCceEEe
Q 001858 710 LIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKN---IRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 710 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
.||+|+||.||+|.+..+++.||+|.+..... .....+.+|..+++. .+||+++++++++ ..++..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAF-----HTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE-----ecCCeEEEE
Confidence 48999999999999998899999998864321 122334455544443 3799999998884 445678999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
|||+++++|.+++.. .+.+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++...
T Consensus 76 ~e~~~~~~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 76 LDLMNGGDLHYHLSQ-----HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred EecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 999999999999976 35689999999999999999999999 9999999999999999999999999999754
Q ss_pred ccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME 942 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1003)
.... .....|+..|+|||...+ ..++.++||||+||++|||++|+.||......... ....
T Consensus 148 ~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-----------~~~~ 209 (279)
T cd05633 148 SKKK-------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----------EIDR 209 (279)
T ss_pred cccC-------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-----------HHHH
Confidence 3211 122468999999998764 56789999999999999999999999754322110 1111
Q ss_pred HHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHHH
Q 001858 943 IVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKNL 991 (1003)
Q Consensus 943 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~L 991 (1003)
.. .... ....+.....+.+++.+|++.+|++|| +++|+++|-
T Consensus 210 ~~---~~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 210 MT---LTVN----VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred Hh---hcCC----cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 10 0011 111223456788899999999999999 699998863
No 341
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-32 Score=320.22 Aligned_cols=277 Identities=19% Similarity=0.206 Sum_probs=191.2
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCC-ceEEEEEe--------------c---cccccchHHHHHHHHHHHhcCCCCc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDL-LPVAVKVI--------------N---LKQKGSIKSFVAECEALKNIRHRNL 762 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~--------------~---~~~~~~~~~~~~E~~~l~~l~h~ni 762 (1003)
..++|++.++||+|+||+||+|..+... ..+++|.+ . .........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3568999999999999999998764322 12222211 0 0111234568899999999999999
Q ss_pred eeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCC
Q 001858 763 IKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPS 842 (1003)
Q Consensus 763 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~ 842 (1003)
+++++++ ...+..++|+|++.+ ++.+++..............++..++.|++.||+|||++ +|+||||||+
T Consensus 226 v~l~~~~-----~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~ 296 (501)
T PHA03210 226 LKIEEIL-----RSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLE 296 (501)
T ss_pred CcEeEEE-----EECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 9999995 345677999999865 888887654333333445677889999999999999999 9999999999
Q ss_pred ceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCC-CCcc
Q 001858 843 NVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRP-THTM 921 (1003)
Q Consensus 843 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P-~~~~ 921 (1003)
|||++.++.+||+|||+++.+.... ........||..|+|||++.+..++.++||||+||++|||++|+.+ +...
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~ 372 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKER----EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDG 372 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCccc----ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCC
Confidence 9999999999999999998664321 1112235799999999999999999999999999999999998764 4322
Q ss_pred cCC-cchhhHHHH------hhCch---hHHHHHHhhccc-CCCCchhhHH--HHHHHHHHHHhhccccCCCCCCCHHHHH
Q 001858 922 FND-GLTLHGFVK------MALPE---KVMEIVDFALLL-DPGNERAKIE--ECLTAVVRIGVLCSMESPSERIHMADAV 988 (1003)
Q Consensus 922 ~~~-~~~~~~~~~------~~~~~---~~~~~i~~~l~~-~~~~~~~~~~--~~~~~l~~l~~~cl~~~p~~RPs~~ev~ 988 (1003)
... ...+..... ...++ ...+.++..... .+........ .....+..++.+|++.||.+||++.|++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL 452 (501)
T PHA03210 373 GGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL 452 (501)
T ss_pred CCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence 111 111111111 01111 122222211111 1100001111 1234567778899999999999999998
Q ss_pred HH
Q 001858 989 KN 990 (1003)
Q Consensus 989 ~~ 990 (1003)
++
T Consensus 453 ~h 454 (501)
T PHA03210 453 AL 454 (501)
T ss_pred hC
Confidence 75
No 342
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.4e-32 Score=292.53 Aligned_cols=249 Identities=28% Similarity=0.419 Sum_probs=202.8
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++|||++++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSI-----ETSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEE-----EeCCEEE
Confidence 47889999999999999999988899999999975543 4567899999999999999999999985 3456789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+++||+++++|.+++... ..+++..++.++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||.+.
T Consensus 76 ~v~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 147 (254)
T cd06627 76 IILEYAENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVAT 147 (254)
T ss_pred EEEecCCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccce
Confidence 999999999999999863 5789999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
....... ......++..|+|||...+..++.++||||+|+++|+|++|+.||...... . ...
T Consensus 148 ~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~---------~~~ 209 (254)
T cd06627 148 KLNDVSK-----DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----A---------ALF 209 (254)
T ss_pred ecCCCcc-----cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----H---------HHH
Confidence 6643221 122346889999999988888899999999999999999999998643210 0 000
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
... ....+ .........+.+++.+|++.+|++||++.|++.+
T Consensus 210 ~~~---~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 210 RIV---QDDHP----PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHh---ccCCC----CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 111 00111 1112234677899999999999999999999853
No 343
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.6e-32 Score=290.65 Aligned_cols=255 Identities=25% Similarity=0.379 Sum_probs=205.0
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.+.||+|++|.||+|.+..+++.|++|++..... ...+.+.+|++++++++|||++++++++... .....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE---EKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---CCCeEE
Confidence 47788999999999999999998899999999875542 4467899999999999999999999985321 126789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 78 lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~ 149 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAK 149 (260)
T ss_pred EEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEE
Confidence 999999999999999873 3789999999999999999999998 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
........ .......++..|+|||...+...+.++||||+|+++|+|++|+.||...... . ....
T Consensus 150 ~~~~~~~~---~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~---------~~~~ 214 (260)
T cd06606 150 RLGDIETG---EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP---M---------AALY 214 (260)
T ss_pred eccccccc---ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---H---------HHHH
Confidence 76433210 1122356889999999998888999999999999999999999998764310 0 0000
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.... ..............+.+++.+|++.+|++||++.|++++
T Consensus 215 ~~~~------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 215 KIGS------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred hccc------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 1000 001111222335678899999999999999999999875
No 344
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=7.3e-32 Score=298.89 Aligned_cols=273 Identities=26% Similarity=0.316 Sum_probs=200.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|++++++++|+|++++++++.. ...+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG---KHLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec---CCCCe
Confidence 4679999999999999999999998999999999874432 223456789999999999999999998532 22356
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++||||+++ +|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~~-~l~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~ 154 (309)
T cd07845 83 IFLVMEYCEQ-DLASLLDNM----PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGL 154 (309)
T ss_pred EEEEEecCCC-CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccce
Confidence 7999999975 899988764 25689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-Cc
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-LP 937 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~~ 937 (1003)
+....... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+ ......... .+
T Consensus 155 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~~~~~~ 228 (309)
T cd07845 155 ARTYGLPA-----KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQLLGTP 228 (309)
T ss_pred eeecCCcc-----CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCC
Confidence 98654321 11122345788999998765 457899999999999999999999997543211 111100000 00
Q ss_pred -hhHHHHHHh-----hccc--CCCC-chhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 938 -EKVMEIVDF-----ALLL--DPGN-ERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 938 -~~~~~~i~~-----~l~~--~~~~-~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
.......+. .... .+.. ...........+.+++.+|++.||++||++.|++++-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 229 NESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred ChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 000000000 0000 0000 0001112355678899999999999999999999864
No 345
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.8e-32 Score=296.51 Aligned_cols=270 Identities=23% Similarity=0.319 Sum_probs=200.3
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++|||++++++++... ..+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 677899999999999999999889999999998553 33456788999999999999999999986431 1367899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
|+||+++ +|.+++... ...+++.+++.++.|+++|++|||+. +++|+||+|+||++++++.+|++|||.+..
T Consensus 78 v~e~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~ 149 (287)
T cd07840 78 VFEYMDH-DLTGLLDSP----EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARP 149 (287)
T ss_pred Eeccccc-cHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceee
Confidence 9999985 899888753 24689999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh---Cch
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA---LPE 938 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~---~~~ 938 (1003)
...... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ......... .+.
T Consensus 150 ~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~ 224 (287)
T cd07840 150 YTKRNS----ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDE 224 (287)
T ss_pred ccCCCc----ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchh
Confidence 643221 11122356888999997665 457899999999999999999999987543211 111111100 000
Q ss_pred hHHHH----HHhhcccCCCCc---hhhHHH-HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEI----VDFALLLDPGNE---RAKIEE-CLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~----i~~~l~~~~~~~---~~~~~~-~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..... ............ ...... +...+.+++.+|++.+|++||++++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 225 NWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000 000000000000 011112 25678999999999999999999999874
No 346
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=9.3e-32 Score=298.91 Aligned_cols=249 Identities=25% Similarity=0.326 Sum_probs=196.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.|+..+.||+|+||.||+|++..++..||+|.+..... ...+.+.+|++++++++|||++++++++ .++...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~ 100 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCY-----LREHTA 100 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----eeCCeE
Confidence 47778899999999999999988899999999864322 2345788999999999999999999985 345677
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||+.+ ++.+.+... ...+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++++|||++
T Consensus 101 ~lv~e~~~g-~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 101 WLVMEYCLG-SASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred EEEEeCCCC-CHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCc
Confidence 999999975 888877653 34689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccCCccccCcccccccccccccCccccC---CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGM---GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
..... .....|+..|+|||++. ++.++.++||||+||++|||++|+.||......
T Consensus 173 ~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------------- 230 (317)
T cd06635 173 SIASP---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------------- 230 (317)
T ss_pred cccCC---------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-------------
Confidence 65422 11245888999999873 456889999999999999999999998653211
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
........... + ..........+.+++.+|++.+|.+||++.+++++...
T Consensus 231 ~~~~~~~~~~~---~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 231 SALYHIAQNES---P---TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred HHHHHHHhccC---C---CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 00111111111 1 01112334567899999999999999999999987654
No 347
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.2e-32 Score=291.48 Aligned_cols=251 Identities=23% Similarity=0.268 Sum_probs=204.2
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|++.++||+|+||.||+|.+..+++.+|+|.+.... ......+.+|+++++.++||||+++.+++ .+....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF-----LDGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhh-----ccCCEEE
Confidence 4788899999999999999999899999999987432 33456788999999999999999999884 4567889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||+++++|.+++...... ...+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||++.
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~ 151 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKK-RKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISK 151 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchh
Confidence 999999999999999774322 45689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM 941 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1003)
..... ......++..|+|||...+..++.++|+||+|+++|||++|+.||...... +..
T Consensus 152 ~~~~~-------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------------~~~ 210 (256)
T cd08530 152 VLKKN-------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--------------DLR 210 (256)
T ss_pred hhccC-------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------------HHH
Confidence 66432 111245788999999999989999999999999999999999998653211 111
Q ss_pred HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 942 EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 942 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+. .... .+........+.+++.+|++.+|++||++.|++++
T Consensus 211 ~~~~---~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 211 YKVQ---RGKY---PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHHh---cCCC---CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1111 1111 11122445678999999999999999999999875
No 348
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=281.59 Aligned_cols=273 Identities=23% Similarity=0.336 Sum_probs=220.8
Q ss_pred HHHHHhccCCccCeeeeccceEEEEEEECCCC-----ceEEEEEeccc-cccchHHHHHHHHHHHhcCCCCceeEeeeee
Q 001858 697 ELNKATNEFSLSNLIGQGSFGFVYRGNLGEDL-----LPVAVKVINLK-QKGSIKSFVAECEALKNIRHRNLIKIITVCS 770 (1003)
Q Consensus 697 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 770 (1003)
++.....+++....+-+|.||+||.|.+.+.. +.|-+|.++.. ++-....+..|.-.+....|||+..+.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 34444456777788999999999999876432 34666666522 2334567889999999999999999999974
Q ss_pred ecccCCCCceEEeeecccCCCHHHHHhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC
Q 001858 771 SIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQ---VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 847 (1003)
Q Consensus 771 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~ 847 (1003)
++....++++.++.-|+|..|++.++.. ....+...+...++.|++.|++|||++ +|||.||.++|+++|
T Consensus 358 ----e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 358 ----EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred ----eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 4667789999999999999999965422 234577888899999999999999999 999999999999999
Q ss_pred CCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcc
Q 001858 848 HDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGL 926 (1003)
Q Consensus 848 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~ 926 (1003)
+.-++|++|=.+++.+.+.++..-+.. .-.+..||+||.+....|+.++||||||+++|||+| |+.|+...++
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDn---EnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP--- 504 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDN---ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP--- 504 (563)
T ss_pred hheeEEeccchhccccCcccccccCCC---CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH---
Confidence 999999999999999988766543332 235678999999999999999999999999999999 9999876542
Q ss_pred hhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhhhh
Q 001858 927 TLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREKYK 999 (1003)
Q Consensus 927 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~~~ 999 (1003)
.++...++.. .|...+-+|+++++.+|..||...|++||++++++..|.+++.+..
T Consensus 505 -----------fEm~~ylkdG------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt 560 (563)
T KOG1024|consen 505 -----------FEMEHYLKDG------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLT 560 (563)
T ss_pred -----------HHHHHHHhcc------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHh
Confidence 3344433322 2334445788999999999999999999999999999999987764
No 349
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.98 E-value=3.1e-32 Score=298.61 Aligned_cols=246 Identities=23% Similarity=0.325 Sum_probs=197.5
Q ss_pred cCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 708 SNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
..+||+|+||.||+|....+++.||||.+..........+.+|+.+++.++|+|++++++++ ...+..++||||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEE-----EeCCEEEEEEecC
Confidence 36799999999999999989999999998755555567899999999999999999999985 4467889999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||++.......
T Consensus 100 ~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 100 EGGALTDIVTH------TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 99999998754 3578999999999999999999999 99999999999999999999999999987543211
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
.......|+..|+|||...+..++.++|+||+|+++|+|++|+.||...... .....+...
T Consensus 171 -----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--------------~~~~~~~~~ 231 (292)
T cd06657 171 -----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------------KAMKMIRDN 231 (292)
T ss_pred -----ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------------HHHHHHHhh
Confidence 1122356889999999988888999999999999999999999998642211 011111111
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
... ...........+.+++.+|++.+|.+||++.+++++
T Consensus 232 ~~~----~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 232 LPP----KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCc----ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 110 001111234557788999999999999999999986
No 350
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.98 E-value=1e-31 Score=293.71 Aligned_cols=266 Identities=18% Similarity=0.267 Sum_probs=196.3
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
|++.++||+|+||.||+|.+..+++.||+|+++... ........+|+.+++++. |||++++++++.. ...+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~---~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFD---RKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEec---CCCCcEEE
Confidence 677899999999999999999899999999987432 222334567888899885 9999999998643 12367899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
|+||+++ ++.+++... ...+++.+++.++.|++.|++|||+. +++||||+|+||+++. +.+||+|||+++.
T Consensus 78 v~e~~~~-~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~ 148 (282)
T cd07831 78 VFELMDM-NLYELIKGR----KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRG 148 (282)
T ss_pred EEecCCc-cHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccc
Confidence 9999975 888888763 24689999999999999999999999 9999999999999999 9999999999976
Q ss_pred cccCCccccCcccccccccccccCccccC-CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh---Cch
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGM-GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA---LPE 938 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~---~~~ 938 (1003)
..... ......++..|+|||+.. ++.++.++||||+||++|||++|+.||......+ ........ .++
T Consensus 149 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~~~ 220 (282)
T cd07831 149 IYSKP------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTPDA 220 (282)
T ss_pred cccCC------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCCCH
Confidence 53321 111245788999999754 4567889999999999999999999997543211 11111111 111
Q ss_pred hHHHHHHhhcccC---CCC----chhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLD---PGN----ERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~---~~~----~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+........... +.. -.......+..+.+++.+|++++|++||+++|++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 221 EVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred HHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 1111111100000 000 011122446789999999999999999999999875
No 351
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=7.3e-32 Score=291.46 Aligned_cols=244 Identities=27% Similarity=0.346 Sum_probs=195.6
Q ss_pred eeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
||.|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++ .++...++|+||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF-----KDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE-----EcCCccEEEEecC
Confidence 689999999999999889999999986432 23456799999999999999999999984 4567789999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++.+. ..+++.++..++.|+++|++|+|+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 76 ~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~ 147 (262)
T cd05572 76 LGGELWTILRDR-----GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ 147 (262)
T ss_pred CCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc
Confidence 999999999873 4588999999999999999999998 99999999999999999999999999997653321
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
......|+..|+|||...+..++.++|+||+|+++|+|++|+.||.....+.. +......+..
T Consensus 148 ------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----------~~~~~~~~~~ 210 (262)
T cd05572 148 ------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM-----------EIYNDILKGN 210 (262)
T ss_pred ------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH-----------HHHHHHhccC
Confidence 11234678899999998888899999999999999999999999976432100 0111111100
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-----MADAVKN 990 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~ 990 (1003)
. ...........+.+++.+||+.+|++||+ ++|++++
T Consensus 211 ~------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 211 G------KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred C------CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 0 01111122567899999999999999999 7777764
No 352
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=3.1e-32 Score=305.96 Aligned_cols=276 Identities=21% Similarity=0.270 Sum_probs=200.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecc--------
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSID-------- 773 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 773 (1003)
..+|++.+.||+|+||+||+|.+..+++.||+|.+........+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999999999999999987666666678899999999999999999988754321
Q ss_pred -cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-CCC
Q 001858 774 -FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMV 851 (1003)
Q Consensus 774 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~ 851 (1003)
..+....++|+||+++ +|.+++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||+++. ++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 84 SLTELNSVYIVQEYMET-DLANVLEQ------GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccceEEEEeecccc-cHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 1122457899999974 89888863 3588999999999999999999999 9999999999999984 567
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhH
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHG 930 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~ 930 (1003)
+|++|||.++....... .........++..|+|||.+.. ..++.++||||+||++|||++|+.||......+.. ..
T Consensus 154 ~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~-~~ 230 (342)
T cd07854 154 LKIGDFGLARIVDPHYS--HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQM-QL 230 (342)
T ss_pred EEECCcccceecCCccc--cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HH
Confidence 89999999976532111 1111122357889999997654 56788999999999999999999999754321110 00
Q ss_pred HHHh-hC--chhHHHH---HHhhcc-cCCCCc---hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 931 FVKM-AL--PEKVMEI---VDFALL-LDPGNE---RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 931 ~~~~-~~--~~~~~~~---i~~~l~-~~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.... .. +.+.... ...... .....+ ..........+.+++.+|++.+|++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 00 0000000 000000 000001 11112344678899999999999999999999864
No 353
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.98 E-value=4.1e-32 Score=295.88 Aligned_cols=246 Identities=24% Similarity=0.298 Sum_probs=193.6
Q ss_pred eeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
||+|+||+||+|.+..+++.||+|.+.... ....+.+.+|+++++.++|||++++++++ ...+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 689999999999999899999999986432 22345678899999999999999999884 4567789999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++.... ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+......
T Consensus 76 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~- 148 (277)
T cd05577 76 NGGDLKYHIYNVG---EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG- 148 (277)
T ss_pred CCCcHHHHHHHcC---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-
Confidence 9999999998643 24689999999999999999999999 9999999999999999999999999999765321
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
.......++..|+|||+..+..++.++||||+|+++|+|++|+.||........ . +.+.. .
T Consensus 149 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~---------~~~~~----~ 209 (277)
T cd05577 149 -----KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-K---------EELKR----R 209 (277)
T ss_pred -----CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-H---------HHHHh----c
Confidence 111234578899999999888899999999999999999999999965432100 0 01111 1
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
....+. .........+.+++.+||+.+|++|| ++.+++.+
T Consensus 210 ~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 210 TLEMAV---EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred cccccc---cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 111110 11112355678999999999999999 77777654
No 354
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=6.5e-32 Score=301.08 Aligned_cols=269 Identities=23% Similarity=0.267 Sum_probs=200.9
Q ss_pred HHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCC
Q 001858 699 NKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 699 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (1003)
..++++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+++++.++|||++++.+++. ..
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~----~~ 81 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFI----SP 81 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEe----cC
Confidence 34678899999999999999999999999999999987532 2233567889999999999999999999853 23
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
....++|+||+. ++|.++++. ..+++..+..++.|+++|++|||+. +|+||||+|+||+++.++.++++|
T Consensus 82 ~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~d 151 (328)
T cd07856 82 LEDIYFVTELLG-TDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICD 151 (328)
T ss_pred CCcEEEEeehhc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCc
Confidence 456789999984 589888864 3578888899999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH--
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK-- 933 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~-- 933 (1003)
||.+...... .....++..|+|||.+.+ ..++.++||||+||++|+|++|+.||........ ......
T Consensus 152 fg~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~-~~~~~~~~ 222 (328)
T cd07856 152 FGLARIQDPQ--------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQ-FSIITDLL 222 (328)
T ss_pred cccccccCCC--------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHh
Confidence 9999753211 122457889999998765 5688999999999999999999999965432110 000000
Q ss_pred hhCchhHH---------HHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 934 MALPEKVM---------EIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 934 ~~~~~~~~---------~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...++++. +.+.......+.............+.+++.+|++.+|++||++++++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 223 GTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00111111 1111111111111111112234678899999999999999999999876
No 355
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.98 E-value=7.1e-32 Score=302.99 Aligned_cols=275 Identities=22% Similarity=0.256 Sum_probs=200.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc-CCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF-KGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 778 (1003)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+++++.++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368999999999999999999998889999999986432 2234568899999999999999999998654321 2234
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++|+||+.. ++.++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 94 ~~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred eEEEEeccccc-CHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 56899999965 7776642 3588999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh--h
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM--A 935 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~--~ 935 (1003)
+++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ........ .
T Consensus 163 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~ 233 (342)
T cd07879 163 LARHADA--------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGV 233 (342)
T ss_pred CCcCCCC--------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCC
Confidence 9875421 1123467889999998776 468899999999999999999999997532111 11110000 0
Q ss_pred CchhHHHHHH--------hhcccCCCCc-hhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHh
Q 001858 936 LPEKVMEIVD--------FALLLDPGNE-RAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN--LCAARE 996 (1003)
Q Consensus 936 ~~~~~~~~i~--------~~l~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~--L~~~~~ 996 (1003)
..+...+... ......+... ..........+.+++.+|++.+|++||+++|++++ ++..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 234 PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred CCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0011111000 0000000000 01111234567899999999999999999999976 555543
No 356
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5.4e-33 Score=278.25 Aligned_cols=202 Identities=27% Similarity=0.385 Sum_probs=178.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.++|+..++||+|.||.|.+++.+.+++.+|+|+++++- ..+...-..|-++++..+||.+..+--. |...+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCc
Confidence 467889999999999999999999999999999998543 3445667789999999999998876543 77888
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..+.||||+.||.|.-++++ ...+++...+-+..+|..|+.|||++ +||+||+|.+|.++|.+|++||+|||
T Consensus 242 rlCFVMeyanGGeLf~HLsr-----er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFG 313 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFG 313 (516)
T ss_pred eEEEEEEEccCceEeeehhh-----hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecc
Confidence 99999999999999999987 45788888888999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcc
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
+++.-. ........++||+.|.|||++....|+.++|.|.+||++|||++|+.||-..
T Consensus 314 LCKE~I-----~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 314 LCKEEI-----KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred cchhcc-----cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 997431 2233445689999999999999999999999999999999999999999654
No 357
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=1.1e-31 Score=296.63 Aligned_cols=278 Identities=21% Similarity=0.297 Sum_probs=202.2
Q ss_pred HHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecc----
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSID---- 773 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 773 (1003)
...++|++.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|++++++++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999999889999999987443 233457788999999999999999999875422
Q ss_pred -cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCe
Q 001858 774 -FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 852 (1003)
Q Consensus 774 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~ 852 (1003)
..+....++|+||+++ ++.+++... ...+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcE
Confidence 1234478999999986 777777653 34689999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHH
Q 001858 853 HVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 853 kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~ 931 (1003)
||+|||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ..+...
T Consensus 156 kl~dfg~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~ 230 (302)
T cd07864 156 KLADFGLARLYNSEES----RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELI 230 (302)
T ss_pred EeCcccccccccCCcc----cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHH
Confidence 9999999976543221 11122346788999998765 35688999999999999999999998643211 001000
Q ss_pred HH---hhCchhHHHHHHhhc----ccCCC---CchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 932 VK---MALPEKVMEIVDFAL----LLDPG---NERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 932 ~~---~~~~~~~~~~i~~~l----~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.. ...+.....+..... ..... ..+......+..+.+++.+||+.+|++||++.+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 000000000000000 00000 0011112245678999999999999999999999864
No 358
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=1.8e-32 Score=318.57 Aligned_cols=262 Identities=23% Similarity=0.309 Sum_probs=192.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc-cccchHHHHHHHHHHHhcCCCCceeEeeeeeecc-------
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK-QKGSIKSFVAECEALKNIRHRNLIKIITVCSSID------- 773 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 773 (1003)
..+|+..+.||+||||.||+++.+-+|+.||||++... +......+.+|++.+++++|||||+++....+..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 45788889999999999999999999999999999754 3344567889999999999999999984221000
Q ss_pred ------------------------------------------------------------------------------cC
Q 001858 774 ------------------------------------------------------------------------------FK 775 (1003)
Q Consensus 774 ------------------------------------------------------------------------------~~ 775 (1003)
..
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 00
Q ss_pred ---------------------CC--------CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 001858 776 ---------------------GD--------DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYL 826 (1003)
Q Consensus 776 ---------------------~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L 826 (1003)
.+ ...|+-||||+..++.++++.... .-.....|+++++|++|++|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~----~~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF----NSQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc----chhhHHHHHHHHHHHHHHHHH
Confidence 00 236788999999888888876421 114677899999999999999
Q ss_pred HhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc------c---C----CccccCcccccccccccccCccccCCC
Q 001858 827 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF------D---R----PIQETSSSSIGIKGTVGYVAPEYGMGG 893 (1003)
Q Consensus 827 H~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~------~---~----~~~~~~~~~~~~~gt~~y~aPE~~~~~ 893 (1003)
|+. |||||||||.||++++++.|||+|||+|+... + . .........+..+||.-|+|||++.+.
T Consensus 714 H~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 999 99999999999999999999999999998722 0 0 011122244567899999999998765
Q ss_pred ---CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHH
Q 001858 894 ---NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIG 970 (1003)
Q Consensus 894 ---~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~ 970 (1003)
.|+.|+|+||+|||++||+. ||.+....-. .+..+.+.. -|.+ .....+....-.+++
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~------------iL~~LR~g~---iP~~-~~f~~~~~~~e~slI 851 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERAS------------ILTNLRKGS---IPEP-ADFFDPEHPEEASLI 851 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHHHHH------------HHHhcccCC---CCCC-cccccccchHHHHHH
Confidence 49999999999999999996 5654221000 011111111 1111 111112233346889
Q ss_pred hhccccCCCCCCCHHHHHH
Q 001858 971 VLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 971 ~~cl~~~p~~RPs~~ev~~ 989 (1003)
+++++.||++|||+.|++.
T Consensus 852 ~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 852 RWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHhcCCCccCCCHHHHhh
Confidence 9999999999999999986
No 359
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=5.4e-32 Score=321.50 Aligned_cols=265 Identities=28% Similarity=0.468 Sum_probs=210.9
Q ss_pred hccCCccCeeeeccceEEEEEEECC-------CCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeec
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGE-------DLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSI 772 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 772 (1003)
.++..+.+.+|+|+||.|++|.... ....||||.++... ..+.+.+..|+++++.+ +||||+.++|+|..
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~- 373 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ- 373 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc-
Confidence 3445667799999999999998631 14579999987433 34568899999999999 69999999999854
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcC---------CCCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCC
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSN---------DQVDG--NLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKP 841 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~--~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp 841 (1003)
++..++|+||+..|+|.++++..+ ..... .+...+.+.++.|||.|++||++. ++||||+.+
T Consensus 374 ----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa 446 (609)
T KOG0200|consen 374 ----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA 446 (609)
T ss_pred ----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence 677899999999999999999877 11111 389999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCc
Q 001858 842 SNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHT 920 (1003)
Q Consensus 842 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~ 920 (1003)
+|||++.+..+||+|||+|+...+........... . =+..|||||.+....|+.++||||||+++|||++ |..||.+
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~-~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAG-T-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCC-c-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 99999999999999999998765443332111100 0 2456999999999999999999999999999999 9999865
Q ss_pred ccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 921 MFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
... .+++.+.+. .+.+...++.|..+++.+|+.||+.+|++||++.|+++.+....
T Consensus 525 ~~~-------------~~~l~~~l~------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 525 IPP-------------TEELLEFLK------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCc-------------HHHHHHHHh------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 321 122222222 22333445567889999999999999999999999999998853
No 360
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.98 E-value=8.3e-32 Score=290.65 Aligned_cols=243 Identities=23% Similarity=0.314 Sum_probs=187.7
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHH-HhcCCCCceeEeeeeeecccCCCCceEEee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEAL-KNIRHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.||+|+||.||+|.+..+++.||+|+++.... .....+..|..++ ...+|||++++++++ ..++..++|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF-----QSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE-----EcCCeEEEEE
Confidence 579999999999999988899999999864332 1223445555544 445899999999985 4466789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLF 864 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~ 864 (1003)
||+++++|.++++. .+.+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++++|||++....
T Consensus 77 e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 148 (260)
T cd05611 77 EYLNGGDCASLIKT-----LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL 148 (260)
T ss_pred eccCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecc
Confidence 99999999999976 34688999999999999999999999 99999999999999999999999999987532
Q ss_pred cCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 865 DRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
. .....|+..|+|||...+..++.++||||+|+++|||++|..||...... ...+.+
T Consensus 149 ~---------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------------~~~~~~ 205 (260)
T cd05611 149 E---------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--------------AVFDNI 205 (260)
T ss_pred c---------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--------------HHHHHH
Confidence 1 12345888999999988888899999999999999999999998643211 111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH---HHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM---ADAVKN 990 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~---~ev~~~ 990 (1003)
... ...........+...+.+++.+|++.+|++||++ +|++.+
T Consensus 206 ~~~---~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 206 LSR---RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred Hhc---ccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 111 1000111112345678999999999999999966 455544
No 361
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=1.1e-31 Score=293.62 Aligned_cols=267 Identities=23% Similarity=0.285 Sum_probs=203.0
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
|++.+.||+|++|.||+|.+..+++.+|+|.++.... .....+.+|++++++++|||++++++++ ..+...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF-----RHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh-----ccCCCEEE
Confidence 6678899999999999999988899999999874432 2456788999999999999999999984 45678899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
|+||+++ ++.+++... ...+++.+++.++.|++.|++|||+. +|+|+||+|+||+++.++.++++|||.+..
T Consensus 76 v~e~~~~-~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~ 147 (283)
T cd05118 76 VFEFMDT-DLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARS 147 (283)
T ss_pred EEeccCC-CHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEe
Confidence 9999976 898888764 24689999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh---hCch
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM---ALPE 938 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~---~~~~ 938 (1003)
..... .......++..|+|||...+. .++.++|+||+|+++|+|++|+.||......+. ....... ..+.
T Consensus 148 ~~~~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (283)
T cd05118 148 FGSPV-----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFRTLGTPDPE 221 (283)
T ss_pred cCCCc-----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCchH
Confidence 64322 111224578899999998776 788999999999999999999999865432111 0000000 0001
Q ss_pred hHHHHH---Hhhc----ccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIV---DFAL----LLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i---~~~l----~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...... .... ...........+.....+.+++.+||+++|.+||++.+++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 222 VWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 001100 1110 011111122234466789999999999999999999999864
No 362
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=1.3e-31 Score=299.86 Aligned_cols=274 Identities=20% Similarity=0.254 Sum_probs=199.4
Q ss_pred cCCccCeeeeccceEEEEEEECCC--CceEEEEEecccc--ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGED--LLPVAVKVINLKQ--KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+|++.+.||+|+||.||+|++..+ +..||+|.+.... ....+.+.+|+++++++ .||||+++++++... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 478889999999999999999877 8899999986432 22356788999999999 599999999875432 12345
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++++||++ ++|.+++.. ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRS-----GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred cEEEEEeccc-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 6788999986 589999875 35689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh--h
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM--A 935 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~--~ 935 (1003)
.++........ .........||..|+|||+..+ ..++.++|+||+||++|+|++|+.||....... ........ .
T Consensus 151 ~a~~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 228 (332)
T cd07857 151 LARGFSENPGE-NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQVLGT 228 (332)
T ss_pred Cceeccccccc-ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHHHhCC
Confidence 99865432211 1111223568999999998765 468899999999999999999999987533211 11110000 0
Q ss_pred Cchh-HH--------HHHHhhcccCCCCch-hhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 LPEK-VM--------EIVDFALLLDPGNER-AKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ~~~~-~~--------~~i~~~l~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+++ .. ..... ....+.... .........+.+++.+|++.+|++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 229 PDEETLSRIGSPKAQNYIRS-LPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred CCHHHHHhhhhhhHHHHHHh-ccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0011 11 11110 111111111 1111234578899999999999999999999865
No 363
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.98 E-value=1.1e-31 Score=298.38 Aligned_cols=265 Identities=21% Similarity=0.233 Sum_probs=191.5
Q ss_pred cceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecccCCCH
Q 001858 715 SFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSL 792 (1003)
Q Consensus 715 ~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL 792 (1003)
++|.||.++...+++.||+|+++.. .....+.+.+|+++++.++||||+++++++ .+.+..+++|||+++|+|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEEEEeccCCCCH
Confidence 4456666666668899999998754 334567899999999999999999999984 456778999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCcc--c
Q 001858 793 EDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQ--E 870 (1003)
Q Consensus 793 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~--~ 870 (1003)
.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+|++|||.+......... .
T Consensus 87 ~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 87 EDLLKTHF---PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 99998753 34588999999999999999999999 9999999999999999999999999998765432211 1
Q ss_pred cCcccccccccccccCccccCCC--CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHH----HHH
Q 001858 871 TSSSSIGIKGTVGYVAPEYGMGG--NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVM----EIV 944 (1003)
Q Consensus 871 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~----~~i 944 (1003)
.........++..|+|||++... .++.++||||+||++|||++|+.||........... ......+.... ...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLE-KVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhccCccccccCchhhh
Confidence 11112234578899999998663 578899999999999999999999976432211111 11100000000 000
Q ss_pred Hhhcc------cCC----CCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 945 DFALL------LDP----GNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 945 ~~~l~------~~~----~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
..... ..+ ............++.+++.+||+.+|++||++++++++-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 00000 000 000111223456788999999999999999999999853
No 364
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=8.2e-34 Score=277.41 Aligned_cols=253 Identities=25% Similarity=0.289 Sum_probs=197.1
Q ss_pred cCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEeee
Q 001858 708 SNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
...||.|+||+|++-.++.+|+..|||+++.... .+.+++..|.+...+- +.||||+++|.+ |. ++..+++||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~----F~-EGdcWiCME 143 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL----FS-EGDCWICME 143 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh----hc-CCceeeeHH
Confidence 4679999999999999999999999999985443 5567899998866555 799999999985 33 556689999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFD 865 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~ 865 (1003)
.|+- |+..+.+.--.-....+++.-.-+|..-...|+.||.+.. .|||||+||+|||++..|.+|+||||++..+.+
T Consensus 144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 9976 8777654432222457888888888889999999998875 899999999999999999999999999976643
Q ss_pred CCccccCcccccccccccccCccccCCC--CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHH
Q 001858 866 RPIQETSSSSIGIKGTVGYVAPEYGMGG--NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEI 943 (1003)
Q Consensus 866 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1003)
+ ......+|...|||||.+... .|+.+|||||+|+++||+.||+.||....+ +.+-
T Consensus 221 S------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----------------vfeq 278 (361)
T KOG1006|consen 221 S------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----------------VFEQ 278 (361)
T ss_pred H------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----------------HHHH
Confidence 2 222235688999999998653 488999999999999999999999875321 2222
Q ss_pred HHhhcccCCCCchhhH--HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 944 VDFALLLDPGNERAKI--EECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 944 i~~~l~~~~~~~~~~~--~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+..-...+|..-.... -+....+.+++.-|+..+-++||...++.++
T Consensus 279 l~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 279 LCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 3333334443222111 1356678999999999999999999998763
No 365
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.98 E-value=2.1e-32 Score=303.07 Aligned_cols=211 Identities=31% Similarity=0.418 Sum_probs=178.4
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhcCCCCceeEeeeeeecc-cCCCCce
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNIRHRNLIKIITVCSSID-FKGDDFK 780 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~ 780 (1003)
..|...+.||+|+||.||+|+++.+|+.||||.++... ....+...+|++++++++|||||+++++-.... ....+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 34667789999999999999999999999999997543 344678899999999999999999999732211 1113456
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC--CCC--CeEEcc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD--HDM--VAHVSD 856 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~--~~kl~D 856 (1003)
.+|||||.+|+|...+++... ...+++.+.+.+..+++.|+.|||++ +|+||||||.||++- ++| ..||+|
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN--~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPEN--AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred eEEEeecCCCcHHHHhcCccc--ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeec
Confidence 899999999999999988654 45799999999999999999999999 999999999999994 444 369999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCC
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFND 924 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~ 924 (1003)
||+|+.+.+.. ....++||..|.+||.... +.|+..+|.|||||++|+.+||..||......
T Consensus 168 fG~Arel~d~s------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 168 FGAARELDDNS------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred ccccccCCCCC------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 99999875533 4456889999999999884 78899999999999999999999999876544
No 366
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.8e-31 Score=299.76 Aligned_cols=271 Identities=21% Similarity=0.235 Sum_probs=200.4
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc-CCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF-KGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 777 (1003)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++..... ...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999999899999999986332 2234578899999999999999999998643211 112
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++||||+ +++|.+++.. ..+++.+++.++.|+++|++|||+. +|+||||||+||+++.++.++++||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 3468999999 6699988864 3588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh--
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM-- 934 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~-- 934 (1003)
|++...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||....... ........
T Consensus 163 g~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 233 (343)
T cd07880 163 GLARQTDSE--------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTG 233 (343)
T ss_pred ccccccccC--------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 999754221 123457889999998776 457889999999999999999999997543211 11111110
Q ss_pred hCchh---------HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 935 ALPEK---------VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 935 ~~~~~---------~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..+.. ............+.......+.+...+.+++.+|+..+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 01111 111111111111111111112345568899999999999999999999964
No 367
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.7e-31 Score=298.45 Aligned_cols=277 Identities=22% Similarity=0.251 Sum_probs=203.2
Q ss_pred HHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecc
Q 001858 696 AELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSID 773 (1003)
Q Consensus 696 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 773 (1003)
.++...+++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 344556789999999999999999999998899999999986432 223467888999999999999999999865322
Q ss_pred -cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCe
Q 001858 774 -FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 852 (1003)
Q Consensus 774 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~ 852 (1003)
+......+++++++ +++|.++++. ..+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 22334567888887 6799888764 3588999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHH
Q 001858 853 HVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGF 931 (1003)
Q Consensus 853 kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~ 931 (1003)
||+|||+++.... ......++..|+|||...+ ..++.++||||+||++|||++|+.||....... .....
T Consensus 160 kl~dfg~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~ 230 (345)
T cd07877 160 KILDFGLARHTDD--------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLI 230 (345)
T ss_pred EEecccccccccc--------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 9999999975422 1123467889999998766 467889999999999999999999986532211 11111
Q ss_pred HHh----------hCchhHHHHHHhhcccCCCCchh-hHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 932 VKM----------ALPEKVMEIVDFALLLDPGNERA-KIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 932 ~~~----------~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
... .++..........+...+..... ........+.+++.+|++.+|.+||++.+++++=
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 110 01111011111111111111100 0011245678999999999999999999999763
No 368
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.8e-31 Score=296.35 Aligned_cols=280 Identities=22% Similarity=0.303 Sum_probs=200.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc--cchHHHHHHHHHHHhcCCCCceeEeeeeeeccc---CC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--GSIKSFVAECEALKNIRHRNLIKIITVCSSIDF---KG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 776 (1003)
.++|++.++||+|+||.||+|++..+++.||+|++..... .....+.+|++++++++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 4789999999999999999999998999999999864332 223567889999999999999999987543221 22
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
....++|+||+++ ++.+.+... ...+++.+++.++.|+++|++|||+. +|+||||||+||+++.++.++++|
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP----SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 4467899999976 777777643 34689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCcccc------CcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhh
Q 001858 857 FGLAKFLFDRPIQET------SSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLH 929 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~ 929 (1003)
||+++.......... ........+++.|+|||...+. .++.++||||+||++|||++|+.||........ ..
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~-~~ 237 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ-LH 237 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH-HH
Confidence 999976543221111 1111234578899999987654 578999999999999999999999875332111 11
Q ss_pred HHHHh---hCchhHHHHHH-------hhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 930 GFVKM---ALPEKVMEIVD-------FALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 930 ~~~~~---~~~~~~~~~i~-------~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..... ..+..+..... ......+.............+.+++.+|++.+|++||++.|++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 10000 00000000000 000000100011112233568899999999999999999999864
No 369
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=289.69 Aligned_cols=196 Identities=27% Similarity=0.430 Sum_probs=170.7
Q ss_pred cCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeee
Q 001858 708 SNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
.++||.|.||+||-|+++.+|+.||||++.+.. ......+.+|+.|++.++||.||.+... ++..+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M-----~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM-----FETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe-----ecCCceEEEEeh
Confidence 478999999999999999999999999997432 2334788999999999999999999988 567888999999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC---CCeEEcccccccc
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLAKF 862 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~~kl~DfG~a~~ 862 (1003)
.+.| +..+.|-... .+.+++....-+..||+.|+.|||.+ +|+|+|+||+|||+... -++||||||+|++
T Consensus 644 Kl~G-DMLEMILSsE---kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 644 KLHG-DMLEMILSSE---KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred hhcc-hHHHHHHHhh---cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceee
Confidence 9966 6656554433 67899999999999999999999999 99999999999999653 3799999999998
Q ss_pred cccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcc
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
+... ...+.++||+.|.|||++..+.|...-|+||.|||+|--++|..||...
T Consensus 717 IgEk------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 717 IGEK------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred cchh------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 7543 3445689999999999999999999999999999999999999999753
No 370
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.7e-31 Score=291.61 Aligned_cols=254 Identities=25% Similarity=0.394 Sum_probs=203.5
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCC
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 778 (1003)
++|.+.+.||+|+||.||+|+...+++.||+|++.... ....+.+.+|++++++++ ||||++++++ +.+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~-----~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYT-----FQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHH-----hcCCc
Confidence 46889999999999999999999899999999987432 233467889999999998 9999999988 45677
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||+++++|.+++.+ .+.+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.++++|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRK-----YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCc
Confidence 88999999999999999987 34799999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCcccc---------------CcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccC
Q 001858 859 LAKFLFDRPIQET---------------SSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFN 923 (1003)
Q Consensus 859 ~a~~~~~~~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~ 923 (1003)
++........... ........++..|+|||...+..++.++||||+|++++++++|+.||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 9986643221100 1222345678999999998888899999999999999999999999875321
Q ss_pred CcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH----HHHHHH
Q 001858 924 DGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM----ADAVKN 990 (1003)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~----~ev~~~ 990 (1003)
. ........ ..... .......+.+++.+|++.+|++||++ +|++++
T Consensus 228 ~-------------~~~~~~~~-~~~~~-------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 228 Y-------------LTFQKILK-LEYSF-------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred H-------------HHHHHHHh-cCCCC-------CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 0 00111111 11111 11225568899999999999999999 887764
No 371
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=1.7e-31 Score=299.49 Aligned_cols=274 Identities=20% Similarity=0.274 Sum_probs=197.9
Q ss_pred ccCC-ccCeeeeccceEEEEEEECCCCceEEEEEeccccccc--------------hHHHHHHHHHHHhcCCCCceeEee
Q 001858 703 NEFS-LSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS--------------IKSFVAECEALKNIRHRNLIKIIT 767 (1003)
Q Consensus 703 ~~~~-~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~~ 767 (1003)
++|. +.+.||+|+||+||+|.+..+++.||+|+++...... ...+.+|+++++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4565 4577999999999999999899999999986432211 125788999999999999999999
Q ss_pred eeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC
Q 001858 768 VCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 847 (1003)
Q Consensus 768 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~ 847 (1003)
++ ..++..++||||++ |+|.+++.. ...+++..+..++.|++.|++|||+. +++||||+|+||+++
T Consensus 88 ~~-----~~~~~~~lv~e~~~-~~l~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~ 153 (335)
T PTZ00024 88 VY-----VEGDFINLVMDIMA-SDLKKVVDR-----KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFIN 153 (335)
T ss_pred EE-----ecCCcEEEEEeccc-cCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEEC
Confidence 85 45667899999997 599999875 34689999999999999999999999 999999999999999
Q ss_pred CCCCeEEcccccccccccCCcc---------ccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCC
Q 001858 848 HDMVAHVSDFGLAKFLFDRPIQ---------ETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRP 917 (1003)
Q Consensus 848 ~~~~~kl~DfG~a~~~~~~~~~---------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P 917 (1003)
.++.++++|||.+......... ..........++..|+|||.+.+. .++.++||||+||++|||++|+.|
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p 233 (335)
T PTZ00024 154 SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPL 233 (335)
T ss_pred CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999765421110 011111223468899999998764 468899999999999999999999
Q ss_pred CCcccCCcchhhHHHHhh---CchhHHHHHH-----hhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 001858 918 THTMFNDGLTLHGFVKMA---LPEKVMEIVD-----FALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~---~~~~~~~~i~-----~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~ 989 (1003)
|......+. +....... ....+..... ......+.............+.+++.+|++.+|++||+++|++.
T Consensus 234 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 234 FPGENEIDQ-LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCCCCHHHH-HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 975432211 11000000 0000000000 00000000001111223466889999999999999999999997
Q ss_pred HH
Q 001858 990 NL 991 (1003)
Q Consensus 990 ~L 991 (1003)
+-
T Consensus 313 ~~ 314 (335)
T PTZ00024 313 HE 314 (335)
T ss_pred Cc
Confidence 53
No 372
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=2.9e-31 Score=289.13 Aligned_cols=243 Identities=21% Similarity=0.262 Sum_probs=186.7
Q ss_pred eeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHH---HHhcCCCCceeEeeeeeecccCCCCceEEe
Q 001858 710 LIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEA---LKNIRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 710 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~---l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
.||+|+||.||+|.+..+++.||+|.+..... .....+..|..+ ++...||+++++.+++ .+.+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 48999999999999988899999999864321 112234444443 4445799999999884 456778999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
|||+.+++|.+++.. .+.+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 76 ~e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 76 LDLMNGGDLHYHLSQ-----HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred EecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 999999999999875 35699999999999999999999999 9999999999999999999999999999754
Q ss_pred ccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME 942 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1003)
.... .....|+..|+|||...++ .++.++||||+|+++|||++|+.||......... ....
T Consensus 148 ~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~-----------~~~~ 209 (278)
T cd05606 148 SKKK-------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----------EIDR 209 (278)
T ss_pred CccC-------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH-----------HHHH
Confidence 3211 1124689999999998754 6889999999999999999999999764321110 0111
Q ss_pred HHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 943 IVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 943 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
... ...+ .........+.+++.+|+..+|++|| ++.|++++
T Consensus 210 ~~~---~~~~----~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 210 MTL---TMAV----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred Hhh---ccCC----CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 110 1111 01112346788889999999999999 99999875
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.3e-31 Score=300.90 Aligned_cols=271 Identities=21% Similarity=0.259 Sum_probs=200.6
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc-CCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF-KGD 777 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 777 (1003)
..++|++.+.||+|++|.||+|++..+++.||+|++... .....+.+.+|+.++++++|||++++.+++..... ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 467899999999999999999999989999999998643 22234667889999999999999999887432211 222
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...++|+||+ +++|.+++.. ..+++.+++.++.|+++|++|||+. +|+||||||+||+++.++.++|+||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccc
Confidence 3479999999 5699999874 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH---
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK--- 933 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~--- 933 (1003)
|++...... .....++..|+|||...+ ..++.++||||+||++|||++|+.||......+ .+.....
T Consensus 163 g~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~~~ 233 (343)
T cd07851 163 GLARHTDDE--------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNLVG 233 (343)
T ss_pred ccccccccc--------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcC
Confidence 999754221 123457889999998765 367889999999999999999999997543211 0110000
Q ss_pred --------hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 934 --------MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 934 --------~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
....+.....+.....................+.+++.+|++.+|++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 234 TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000111111111111111101011111235678899999999999999999999875
No 374
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=2e-31 Score=288.45 Aligned_cols=247 Identities=26% Similarity=0.368 Sum_probs=193.4
Q ss_pred eeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++|||++++++. +..+...++|+||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~-----~~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYS-----FQGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHh-----eecCcEEEEEEecC
Confidence 6899999999999998899999999864433 345678999999999999999999887 35577789999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++.+. +.+++..++.++.|+++|++|||+. +++||||+|+||+++.++.++++|||++.......
T Consensus 76 ~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~ 147 (265)
T cd05579 76 PGGDLASLLENV-----GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRR 147 (265)
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCc
Confidence 999999999873 4689999999999999999999999 99999999999999999999999999987543221
Q ss_pred cc---ccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHH
Q 001858 868 IQ---ETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIV 944 (1003)
Q Consensus 868 ~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i 944 (1003)
.. ..........++..|+|||...+...+.++||||+|+++|++++|+.||...... .....+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------------~~~~~~ 213 (265)
T cd05579 148 QINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------------EIFQNI 213 (265)
T ss_pred ccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------------HHHHHH
Confidence 10 0011222355788999999998888999999999999999999999998653211 111111
Q ss_pred HhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 001858 945 DFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~ 989 (1003)
.. ... ..+........+.+++.+|++.+|++||++.++.+
T Consensus 214 ~~---~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~ 253 (265)
T cd05579 214 LN---GKI--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEE 253 (265)
T ss_pred hc---CCc--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence 11 100 00111112567889999999999999999944443
No 375
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=3.6e-31 Score=292.89 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=196.7
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
+.|+..+.||+|+||.||+|++..++..||+|.+... .....+++.+|+++++.++|+|++++.+++. ....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCe
Confidence 4577788999999999999999888999999998632 2233457889999999999999999999853 4567
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
.++|+||+. |++.+.+... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++++|||+
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~----~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~ 161 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGS 161 (308)
T ss_pred eEEEEEccC-CCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCccc
Confidence 799999997 5888877653 34588999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccC---CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhC
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGM---GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMAL 936 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~ 936 (1003)
+...... ....|+..|+|||.+. ...++.++||||+||++|+|++|+.||......+
T Consensus 162 ~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------- 221 (308)
T cd06634 162 ASIMAPA---------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----------- 221 (308)
T ss_pred ceeecCc---------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-----------
Confidence 8754221 1245788999999864 3567889999999999999999999986532110
Q ss_pred chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 001858 937 PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAA 994 (1003)
Q Consensus 937 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~ 994 (1003)
....... ...+... .......+.+++.+||+.+|++||++.+++++-...
T Consensus 222 --~~~~~~~---~~~~~~~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 222 --ALYHIAQ---NESPALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred --HHHHHhh---cCCCCcC---cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence 0011111 0111100 112345678999999999999999999999875533
No 376
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=5.9e-31 Score=291.75 Aligned_cols=245 Identities=26% Similarity=0.343 Sum_probs=193.0
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
|...+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|+++++.++|||++++++++ .+....+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCY-----LKEHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEE-----EeCCEEE
Confidence 6667889999999999999988999999999864332 2345788999999999999999999985 3456789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||+. |++.+++... ...+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++.
T Consensus 98 lv~e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~ 169 (313)
T cd06633 98 LVMEYCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSAS 169 (313)
T ss_pred EEEecCC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCc
Confidence 9999996 4888887653 34689999999999999999999999 99999999999999999999999999886
Q ss_pred ccccCCccccCcccccccccccccCccccC---CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGM---GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
.... .....|+..|+|||++. +..++.++||||+||++|||++|+.||.......
T Consensus 170 ~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~------------- 227 (313)
T cd06633 170 KSSP---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------------- 227 (313)
T ss_pred ccCC---------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-------------
Confidence 4211 11346889999999874 4568889999999999999999999986532110
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
....... ...+... .......+.+++.+|++.+|.+||++.+++++
T Consensus 228 ~~~~~~~---~~~~~~~---~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 228 ALYHIAQ---NDSPTLQ---SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHHh---cCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011111 1111111 11223457889999999999999999999975
No 377
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=1.8e-31 Score=288.03 Aligned_cols=252 Identities=21% Similarity=0.272 Sum_probs=196.8
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-----ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-----KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
+|.+.++||+|+||.||+|++...+..+++|+.+... ......+..|+.+++.++|||++++++++ .+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence 5888999999999999999998776667777765321 22334677899999999999999999884 4566
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++|+||+++++|.+++...... ...+++.+++.++.|++.|++|||+. +++|+|++|+||+++. +.++++|||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g 150 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT-GKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFG 150 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccC
Confidence 789999999999999999764322 45789999999999999999999999 9999999999999975 579999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
.+....... .......|+..|+|||...+..++.++|+||+|+++|+|++|..||.....
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--------------- 210 (260)
T cd08222 151 VSRLLMGSC-----DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--------------- 210 (260)
T ss_pred ceeecCCCc-----ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---------------
Confidence 997653321 112234578899999998888889999999999999999999999854210
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
............ ......+...+.+++.+||+.+|++||++.|++++
T Consensus 211 --~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 211 --LSVVLRIVEGPT---PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred --HHHHHHHHcCCC---CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 001111111111 11122345678899999999999999999999875
No 378
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=3.2e-31 Score=291.86 Aligned_cols=254 Identities=23% Similarity=0.319 Sum_probs=195.0
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.++|++.+.||+|+||+||+|.+..+++.||||+++... ....+.+..|+.++.+. .||||+++++++ .++..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF-----ITDSD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee-----ecCCe
Confidence 467889999999999999999999889999999997443 23345667788777777 499999999985 34667
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
.++||||+++ ++.+++... ...+++.++..++.|++.|++|||+ . +|+||||+|+||+++.++.+||+|||
T Consensus 89 ~~~v~e~~~~-~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 89 VFICMELMST-CLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred EEEEeeccCc-CHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccc
Confidence 8999999865 788777653 3478999999999999999999997 5 89999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCC----CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN----VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM 934 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~ 934 (1003)
++..+..... .....++..|+|||.+.+.. ++.++||||+|+++|+|++|+.||.......
T Consensus 161 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------- 225 (296)
T cd06618 161 ISGRLVDSKA------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF--------- 225 (296)
T ss_pred cchhccCCCc------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH---------
Confidence 9976533211 11234788999999987554 7889999999999999999999986432110
Q ss_pred hCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 935 ALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
+.......... + ..+....+..++.+++.+||+.+|++||++.+++++-
T Consensus 226 ---~~~~~~~~~~~---~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 226 ---EVLTKILQEEP---P--SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred ---HHHHHHhcCCC---C--CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 00111111110 0 0001112345688999999999999999999998764
No 379
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=8.6e-31 Score=286.61 Aligned_cols=267 Identities=22% Similarity=0.283 Sum_probs=197.4
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
|++.+.||+|++|+||+|+...+++.||||.+..... .......+|+..+++++ |||++++++++ .+++..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-----~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVF-----RENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHh-----hcCCcEEE
Confidence 6778999999999999999988889999999864432 22334567999999998 99999999984 44778899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||||+ +|+|.+++.... ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+..
T Consensus 76 v~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~ 148 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLARE 148 (283)
T ss_pred EEecC-CCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeeccccee
Confidence 99999 779999987743 34689999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccC-CCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH---hhCch
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGM-GGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK---MALPE 938 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~---~~~~~ 938 (1003)
..... ......++..|+|||+.. +..++.++|+||||+++|||++|+.||......+. ...... ....+
T Consensus 149 ~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (283)
T cd07830 149 IRSRP------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYKICSVLGTPTKQ 221 (283)
T ss_pred ccCCC------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-HHHHHHhcCCCChh
Confidence 53321 112345788999999874 45578999999999999999999999865432111 110000 00011
Q ss_pred hHHHHH------HhhcccCC-CCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIV------DFALLLDP-GNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i------~~~l~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
...+.. ........ .......+.....+.+++++||+.+|++||+++|++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 222 DWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 010000 00000000 00011111224678899999999999999999999865
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-32 Score=284.23 Aligned_cols=263 Identities=25% Similarity=0.341 Sum_probs=199.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--c-----cchHHHHHHHHHHHhcCCCCceeEeeeeeeccc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--K-----GSIKSFVAECEALKNIRHRNLIKIITVCSSIDF 774 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 774 (1003)
.++|-+.+.||+|+|++||+|.+-...+.||||+-.... . ...+...+|.+|.+.+.||.||++++++.
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs---- 537 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS---- 537 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee----
Confidence 356888899999999999999999888999999875321 1 12456788999999999999999999974
Q ss_pred CCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC---CCCC
Q 001858 775 KGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMV 851 (1003)
Q Consensus 775 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~---~~~~ 851 (1003)
.+.+..+-|+||++|.+|+-|++. ...+++.+++.|++||+.|+.||.+. .++|||-|+||.|||+- ..|.
T Consensus 538 lDtdsFCTVLEYceGNDLDFYLKQ-----hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGe 611 (775)
T KOG1151|consen 538 LDTDSFCTVLEYCEGNDLDFYLKQ-----HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGE 611 (775)
T ss_pred eccccceeeeeecCCCchhHHHHh-----hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccce
Confidence 356677899999999999999998 45789999999999999999999997 67899999999999995 3578
Q ss_pred eEEcccccccccccCCccccCc--ccccccccccccCccccCCC----CCCccccchhHHHHHHHHHhCCCCCCcccCCc
Q 001858 852 AHVSDFGLAKFLFDRPIQETSS--SSIGIKGTVGYVAPEYGMGG----NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDG 925 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~ell~g~~P~~~~~~~~ 925 (1003)
+||+|||+++++.+..+..... -.....||.+|++||.+--+ +++.|+||||+|||+|+.+.|+.||.......
T Consensus 612 IKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ 691 (775)
T KOG1151|consen 612 IKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ 691 (775)
T ss_pred eEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH
Confidence 9999999999987655432211 12346799999999976533 57889999999999999999999998643221
Q ss_pred chhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 001858 926 LTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~ 989 (1003)
..+. + ..+-++........ +....+...++++|+.+--++|....++..
T Consensus 692 dILq--------e---NTIlkAtEVqFP~K----PvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 692 DILQ--------E---NTILKATEVQFPPK----PVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred HHHh--------h---hchhcceeccCCCC----CccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1110 0 00111111111111 122344566777888888888877777654
No 381
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=4.6e-31 Score=288.63 Aligned_cols=267 Identities=25% Similarity=0.349 Sum_probs=200.6
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
|+..+.||+|++|.||+|+...+++.||+|++.... ....+.+.+|++++++++|||++++++++ .+.+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVI-----HTERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhh-----hcCCceEE
Confidence 567789999999999999999889999999997553 33456788999999999999999999984 44578899
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
|+||+++ +|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||.+..
T Consensus 76 v~e~~~~-~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~ 147 (282)
T cd07829 76 VFEYCDM-DLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARA 147 (282)
T ss_pred EecCcCc-CHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccc
Confidence 9999985 9999998742 4689999999999999999999999 999999999999999999999999999976
Q ss_pred cccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh---hCch
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM---ALPE 938 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~---~~~~ 938 (1003)
...... ......++..|+|||.+.+. .++.++||||+||++|||++|+.||......+. ....... ..+.
T Consensus 148 ~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (282)
T cd07829 148 FGIPLR-----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-LFKIFQILGTPTEE 221 (282)
T ss_pred cCCCcc-----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCcHH
Confidence 532211 11223467789999998776 789999999999999999999999865432111 0000000 0001
Q ss_pred hHHHHHHh-----hcccC-CCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDF-----ALLLD-PGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~-----~l~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+....+. ..... ..............+.+++.+|+..+|++||++.+++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 222 SWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred HHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 11111000 00000 000011122235678999999999999999999999864
No 382
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=298.54 Aligned_cols=266 Identities=21% Similarity=0.305 Sum_probs=223.1
Q ss_pred HHHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecc
Q 001858 695 YAELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSID 773 (1003)
Q Consensus 695 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 773 (1003)
++.+...++-|++.+.||+|.+|.||+++...+++.+|+|+.....+. .+++..|+++++.. .|||++.++|++...+
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 344445567899999999999999999999999999999998755443 36677899999998 7999999999998877
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeE
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 853 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~k 853 (1003)
-..++..++|||||.+||..|+++.-. +..+.|..+..|++.++.|+.|||.. .++|||||-.|||++.++.+|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEE
Confidence 788899999999999999999999866 67899999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCccccCcccccccccccccCccccCC-----CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchh
Q 001858 854 VSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-----GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTL 928 (1003)
Q Consensus 854 l~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~ 928 (1003)
++|||.+..+.. +.......+||+.|||||++.- ..|+.++|+||+|++..||.-|.+|+.++.+-
T Consensus 164 LvDFGvSaQlds-----T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm---- 234 (953)
T KOG0587|consen 164 LVDFGVSAQLDS-----TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM---- 234 (953)
T ss_pred Eeeeeeeeeeec-----ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh----
Confidence 999999976532 2333445789999999998754 35678899999999999999999998876431
Q ss_pred hHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 929 HGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..++. +..+|.+....++....+|.+++..|+..+.++||++.++++|
T Consensus 235 ------------raLF~--IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 235 ------------RALFL--IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ------------hhhcc--CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 11111 2234444445566778899999999999999999999999875
No 383
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5.2e-33 Score=269.33 Aligned_cols=282 Identities=21% Similarity=0.318 Sum_probs=208.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecc--ccccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc---CC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINL--KQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF---KG 776 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 776 (1003)
.+.|+...+||+|.||+||+|+.+.+++.||+|++-. +.++......+|++++..++|+|++.++++|....- .+
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 3567777899999999999999999999999987643 345556778899999999999999999999976432 23
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
....++||++++. +|.-.+... ...++..++.+++.++..|+.|+|+. .|+|||+||.|+|++.+|.+||+|
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~----~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNR----KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCc----cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 4457999999998 898888764 35688999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcc-hhhHHH--
Q 001858 857 FGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGL-TLHGFV-- 932 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~-~~~~~~-- 932 (1003)
||+++.+..+... ....+...+.|.+|.+||.+.|. .++++.|||+.|||+.||++|.+-+++...... .+....
T Consensus 168 FGlar~fs~~~n~-~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 168 FGLARAFSTSKNV-VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCG 246 (376)
T ss_pred cccccceeccccc-CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhc
Confidence 9999876543322 22234456679999999988774 689999999999999999999988876433211 110000
Q ss_pred ---HhhCchhHHHHHHhhcccC--CCCchhhHHHHHH------HHHHHHhhccccCCCCCCCHHHHHHHHH
Q 001858 933 ---KMALPEKVMEIVDFALLLD--PGNERAKIEECLT------AVVRIGVLCSMESPSERIHMADAVKNLC 992 (1003)
Q Consensus 933 ---~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~~~------~l~~l~~~cl~~~p~~RPs~~ev~~~L~ 992 (1003)
+...|.-..--.-..+... |.......++... ...+++.+.+..||.+|+.+.+++.|-.
T Consensus 247 s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 247 SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 0011111000011111111 1111122222222 5667888889999999999999987753
No 384
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=6e-31 Score=288.52 Aligned_cols=254 Identities=23% Similarity=0.290 Sum_probs=194.9
Q ss_pred cCCccCeeeeccceEEEEEEEC---CCCceEEEEEecccc----ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLG---EDLLPVAVKVINLKQ----KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 775 (1003)
+|++.+.||+|+||.||+|+.. .+++.||||+++... ....+.+.+|+++++++ +||+++++++. +.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYA-----FQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhhee-----ee
Confidence 4778899999999999999864 356789999986432 22346788999999999 69999999987 44
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEc
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 855 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~ 855 (1003)
.+...++||||+++++|.+++.. ...+++.++..++.|+++|++|||+. +++||||+|+||+++.++.++++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~ 147 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQ-----REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLT 147 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhh-----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEE
Confidence 56778999999999999999876 34688999999999999999999998 99999999999999999999999
Q ss_pred ccccccccccCCccccCcccccccccccccCccccCCCC--CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH
Q 001858 856 DFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN--VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 856 DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~ 933 (1003)
|||+++....... .......|+..|+|||...+.. .+.++||||+|+++|||++|+.||...... ...
T Consensus 148 dfg~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~----- 217 (288)
T cd05583 148 DFGLSKEFLAEEE----ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQ----- 217 (288)
T ss_pred ECccccccccccc----cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chH-----
Confidence 9999876533211 1112345889999999987665 688999999999999999999998642111 000
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
... ........+.. .......+.+++.+||+.+|++|||++++.+.+
T Consensus 218 ----~~~---~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l 264 (288)
T cd05583 218 ----SEI---SRRILKSKPPF----PKTMSAEARDFIQKLLEKDPKKRLGANGADEIK 264 (288)
T ss_pred ----HHH---HHHHHccCCCC----CcccCHHHHHHHHHHhcCCHhhccCcchHHHHh
Confidence 111 11111111111 112345678899999999999999987775544
No 385
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.2e-30 Score=286.38 Aligned_cols=253 Identities=25% Similarity=0.334 Sum_probs=195.0
Q ss_pred cCCccCeeeeccceEEEEEEEC---CCCceEEEEEecccc----ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLG---EDLLPVAVKVINLKQ----KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 775 (1003)
+|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|+++++++ +|++|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4788899999999999999874 367899999986432 22346788899999999 599999998874 4
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEc
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 855 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~ 855 (1003)
.+...++|+||+++++|.+++.. ...+++..+..++.|+++|++|||+. +++||||+|+||+++.++.+||+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 147 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQ-----RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLT 147 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEe
Confidence 56678999999999999999986 34678899999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCccccCcccccccccccccCccccCCC--CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHH
Q 001858 856 DFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG--NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVK 933 (1003)
Q Consensus 856 DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~ 933 (1003)
|||++......... ......|+..|+|||...+. .++.++||||+|+++|+|++|+.||...... .
T Consensus 148 dfg~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~------- 215 (290)
T cd05613 148 DFGLSKEFHEDEVE----RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-N------- 215 (290)
T ss_pred eCccceeccccccc----ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-c-------
Confidence 99999765332111 11234588999999997753 4678899999999999999999998632111 0
Q ss_pred hhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 001858 934 MALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERI-----HMADAVKN 990 (1003)
Q Consensus 934 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~ 990 (1003)
...+..+......+. ....+...+..++.+|++.+|++|| ++.++..+
T Consensus 216 -----~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 216 -----SQAEISRRILKSEPP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -----cHHHHHHHhhccCCC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 011111111111111 1112345678999999999999997 77777764
No 386
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=244.87 Aligned_cols=201 Identities=24% Similarity=0.410 Sum_probs=172.3
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
+|...++||+|.||+||+|+..++.+.||+|..+..+ ++......+|+-+++.++|.|||+++++ .+.+....
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv-----lhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-----LHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh-----hccCceeE
Confidence 4666789999999999999999999999999987543 4456788999999999999999999998 56678889
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+|+||++. +|..+.... .+.++...++.++.|+++|+.++|++ .+.|||+||+|.++..+|..|++|||+++
T Consensus 78 lvfe~cdq-dlkkyfdsl----ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglar 149 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDSL----NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLAR 149 (292)
T ss_pred EeHHHhhH-HHHHHHHhc----CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhh
Confidence 99999976 888888764 57899999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCccccCcccccccccccccCccccCCCC-CCccccchhHHHHHHHHHh-CCCCCCccc
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN-VSLTGDVYSFGILLLEMFT-GRRPTHTMF 922 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~ell~-g~~P~~~~~ 922 (1003)
-+.-. .......+.|.+|.+|+++.+.+ |+...|+||.||++.|+.. |++-|.+.+
T Consensus 150 afgip-----vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d 207 (292)
T KOG0662|consen 150 AFGIP-----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207 (292)
T ss_pred hcCCc-----eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc
Confidence 76322 11222345799999999998864 7888999999999999998 666566543
No 387
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.7e-32 Score=311.76 Aligned_cols=208 Identities=26% Similarity=0.360 Sum_probs=179.9
Q ss_pred HHHHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeec
Q 001858 696 AELNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSI 772 (1003)
Q Consensus 696 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 772 (1003)
.++.-..++|++.++||+|+||+|..++++.+++.||+|++.+. .......|..|-.+|.--+.+=|+++.-.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA---- 143 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA---- 143 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH----
Confidence 33444567899999999999999999999999999999999753 34556788889999988888888887654
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCe
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 852 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~ 852 (1003)
|.++.+.|+|||||+||+|-.++.+. +++++..++-++..|+-||.-+|+. |+|||||||+|||+|..|++
T Consensus 144 -FQD~~~LYlVMdY~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHi 214 (1317)
T KOG0612|consen 144 -FQDERYLYLVMDYMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHI 214 (1317)
T ss_pred -hcCccceEEEEecccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcE
Confidence 78999999999999999999999984 3799999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCccccCcccccccccccccCccccCC-----CCCCccccchhHHHHHHHHHhCCCCCCc
Q 001858 853 HVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-----GNVSLTGDVYSFGILLLEMFTGRRPTHT 920 (1003)
Q Consensus 853 kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~ell~g~~P~~~ 920 (1003)
|++|||.+-.+...+ .......+|||-|.+||++.. +.|++.+|.||+||++|||+.|..||-.
T Consensus 215 kLADFGsClkm~~dG----~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 215 KLADFGSCLKMDADG----TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred eeccchhHHhcCCCC----cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 999999997765322 122234689999999998653 5789999999999999999999999853
No 388
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=8.7e-31 Score=316.42 Aligned_cols=148 Identities=30% Similarity=0.472 Sum_probs=131.6
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.++|.+.++||+|+||+||+|.+..+++.||||+++... ....+.+.+|+.+++.++||||+++++++ ....
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECC
Confidence 357999999999999999999999899999999987432 22346788999999999999999999874 4466
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..++||||+.+++|.+++.. .+.+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~-----~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHI-----YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 78999999999999999976 34688899999999999999999999 99999999999999999999999999
Q ss_pred cccc
Q 001858 859 LAKF 862 (1003)
Q Consensus 859 ~a~~ 862 (1003)
+++.
T Consensus 150 ls~~ 153 (669)
T cd05610 150 LSKV 153 (669)
T ss_pred CCcc
Confidence 9863
No 389
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.3e-30 Score=279.45 Aligned_cols=240 Identities=28% Similarity=0.348 Sum_probs=192.7
Q ss_pred eeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecc
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYM 787 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 787 (1003)
||+|+||.||++.+..+++.||+|+++.... .....+..|++++++++|||++++++. +..+...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-----~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYA-----FQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHH-----eecCCeeEEEEecC
Confidence 6899999999999988899999999874432 245688999999999999999999987 45677889999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCC
Q 001858 788 QSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRP 867 (1003)
Q Consensus 788 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~ 867 (1003)
++++|.+++... ..+++.++..++.|+++|+.|+|+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~ 147 (250)
T cd05123 76 PGGELFSHLSKE-----GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG 147 (250)
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC
Confidence 999999999873 4689999999999999999999998 99999999999999999999999999997653321
Q ss_pred ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 868 IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 868 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
.......++..|+|||...+...+.++|+||+|+++|++++|+.||...... +.......
T Consensus 148 -----~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-------------~~~~~~~~-- 207 (250)
T cd05123 148 -----SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK-------------EIYEKILK-- 207 (250)
T ss_pred -----CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-------------HHHHHHhc--
Confidence 1122356888999999998888899999999999999999999998653210 00111111
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCH---HHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHM---ADAVK 989 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~---~ev~~ 989 (1003)
... .........+.+++.+|+..+|++||++ +++.+
T Consensus 208 --~~~----~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 208 --DPL----RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred --CCC----CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 100 1111124567889999999999999999 55543
No 390
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-31 Score=290.04 Aligned_cols=243 Identities=23% Similarity=0.246 Sum_probs=197.5
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.+.+|.+...+|+|+|+.|-.+.+..+++..++|++.... .+-.+|+.++... .|||++++.++ +.+..+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v-----~~~~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDV-----YEDGKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecce-----ecCCce
Confidence 3567888888999999999999999999999999997552 2234577776666 79999999999 567888
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEe-CCCCCeEEcccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLL-DHDMVAHVSDFG 858 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill-~~~~~~kl~DfG 858 (1003)
.++|||.+.++-+.+.+...+ ... .++.+|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|+|||
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~-----~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKP-----EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred eeeeehhccccHHHHHHHhcc-----hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEec
Confidence 899999999999988887632 233 67788999999999999999 99999999999999 689999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
.++...+. ....+-|..|.|||++....+++++|+||+|++||+|++|+.||..-+.+
T Consensus 462 ~a~~~~~~--------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------------- 519 (612)
T KOG0603|consen 462 FWSELERS--------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------------- 519 (612)
T ss_pred hhhhCchh--------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--------------
Confidence 99865432 22345688999999999999999999999999999999999999875543
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
..+..++...+ ..+..+....+++.+|++.+|.+||++.++..+=
T Consensus 520 ---~ei~~~i~~~~-----~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 520 ---IEIHTRIQMPK-----FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred ---HHHHHhhcCCc-----cccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 11111221111 1144567788899999999999999999998653
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-31 Score=249.28 Aligned_cols=208 Identities=23% Similarity=0.330 Sum_probs=172.4
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 778 (1003)
..+.......||+|+||.|-+-++..+|+..|+|.+...- .+..++..+|+.+..+- .+|.+|.++|. +....
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa-----~~reg 118 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGA-----LFREG 118 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehh-----hhccc
Confidence 3344555678999999999999999999999999997443 34457788888876555 79999999997 45577
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..+++||.|+. ||..+.++--.. ++.+++...-+||..+.+|+.|||++. .++|||+||+|||++.+|++|+||||
T Consensus 119 dvwIcME~M~t-Sldkfy~~v~~~-g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 119 DVWICMELMDT-SLDKFYRKVLKK-GGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred cEEEeHHHhhh-hHHHHHHHHHhc-CCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccc
Confidence 78999999977 888876654332 678999999999999999999999986 89999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCC----CCCCccccchhHHHHHHHHHhCCCCCCcccC
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG----GNVSLTGDVYSFGILLLEMFTGRRPTHTMFN 923 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~il~ell~g~~P~~~~~~ 923 (1003)
.+.++.++- ......|...|||||.+.. ..|+.++||||+|++++||.++++||+....
T Consensus 195 IsG~L~dSi------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 195 ISGYLVDSI------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred cceeehhhh------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 998775432 1122458889999998654 3688999999999999999999999986544
No 392
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=3.8e-30 Score=273.22 Aligned_cols=220 Identities=20% Similarity=0.140 Sum_probs=175.2
Q ss_pred ccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecccCCCHH
Q 001858 714 GSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLE 793 (1003)
Q Consensus 714 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 793 (1003)
|.+|.||+|++..+++.||+|+++... .+.+|...+....|||++++++++ .+....++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHH
Confidence 899999999999999999999997542 233455555566799999999984 4567889999999999999
Q ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccCc
Q 001858 794 DWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSS 873 (1003)
Q Consensus 794 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 873 (1003)
+++.+. ..+++.++..++.|+++|++|+|+. +|+||||||+||+++.++.++++|||.+......
T Consensus 74 ~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------- 138 (237)
T cd05576 74 SHISKF-----LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------- 138 (237)
T ss_pred HHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-------
Confidence 999763 3589999999999999999999999 9999999999999999999999999988654321
Q ss_pred ccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCC
Q 001858 874 SSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPG 953 (1003)
Q Consensus 874 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 953 (1003)
.....++..|+|||...+..++.++||||+|+++|||++|+.|+....... ......
T Consensus 139 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------------~~~~~~--- 195 (237)
T cd05576 139 -CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------------NTHTTL--- 195 (237)
T ss_pred -cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------------cccccc---
Confidence 112345778999999888889999999999999999999998865321100 000000
Q ss_pred CchhhHHHHHHHHHHHHhhccccCCCCCCCH
Q 001858 954 NERAKIEECLTAVVRIGVLCSMESPSERIHM 984 (1003)
Q Consensus 954 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 984 (1003)
.........+.+++.+|++.+|++||++
T Consensus 196 ---~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 196 ---NIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred ---CCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 0011234567889999999999999997
No 393
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=267.19 Aligned_cols=205 Identities=26% Similarity=0.367 Sum_probs=176.5
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 777 (1003)
..+|....+||+|+||.|-+|..+++.+.+|||++++. .+++.+.-+.|-+++..- +-|.++++..+ +..-
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQTm 422 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQTM 422 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hhhh
Confidence 45788899999999999999999999999999999743 234445556677777766 56788888776 6677
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
+..|.||||+.||+|--.|++ -+.+.+..+.-+|.+||-|+-+||++ ||++||+|.+||++|.+|++||+||
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ-----~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DF 494 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQ-----VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADF 494 (683)
T ss_pred hheeeEEEEecCchhhhHHHH-----hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeec
Confidence 888999999999999999988 56788889999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCC
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFND 924 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~ 924 (1003)
|+++.-. ........++||+.|+|||.+...+|+.++|.||+||++|||+.|+.||++.+.+
T Consensus 495 GmcKEni-----~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~ 556 (683)
T KOG0696|consen 495 GMCKENI-----FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED 556 (683)
T ss_pred ccccccc-----cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 9997421 1223344689999999999999999999999999999999999999999886543
No 394
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=2.2e-29 Score=296.23 Aligned_cols=276 Identities=19% Similarity=0.172 Sum_probs=172.6
Q ss_pred HhccCCccCeeeeccceEEEEEEECCC----CceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeee-cccC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGED----LLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSS-IDFK 775 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~ 775 (1003)
..++|++.++||+|+||.||+|++..+ +..||+|++..... .+.+..| .++...+.++..++..+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 457899999999999999999999888 88999998763322 1222211 1222222233222221111 1114
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCC
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQV---------------DGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLK 840 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dik 840 (1003)
.+...++|+||+++++|.+++....... ........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 5667899999999999999997542100 01122345668999999999999999 99999999
Q ss_pred CCceEeCC-CCCeEEcccccccccccCCccccCcccccccccccccCccccCCC----------------------CCCc
Q 001858 841 PSNVLLDH-DMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG----------------------NVSL 897 (1003)
Q Consensus 841 p~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~ 897 (1003)
|+|||++. ++.+||+|||+|+.+.... ........+|+.|+|||.+... .++.
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 99999986 5799999999997653221 1112235789999999964322 1334
Q ss_pred cccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh-Cc-hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccc
Q 001858 898 TGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA-LP-EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSM 975 (1003)
Q Consensus 898 ~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~ 975 (1003)
++||||+||++|||+++..|++... ..+....... .+ ..+...+......+-...............+++.+|++
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSNL---IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchHH---HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 5699999999999999777644210 0010000000 00 01111111100000000000001112234589999999
Q ss_pred cCCCCCCCHHHHHHH
Q 001858 976 ESPSERIHMADAVKN 990 (1003)
Q Consensus 976 ~~p~~RPs~~ev~~~ 990 (1003)
.||++|||++|+++|
T Consensus 436 ~dP~kR~ta~e~L~H 450 (566)
T PLN03225 436 FKGRQRISAKAALAH 450 (566)
T ss_pred CCcccCCCHHHHhCC
Confidence 999999999999986
No 395
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=267.46 Aligned_cols=268 Identities=24% Similarity=0.300 Sum_probs=201.9
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcC-CC-----CceeEeeeeeecccC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIR-HR-----NLIKIITVCSSIDFK 775 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~~ 775 (1003)
+++|.+...+|+|.||.|-++.+..++..||+|+++.... ..+...-|+++++++. +. -++++.+| |.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 7899999999999999999999999999999999974332 2355667999999993 32 24555555 45
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-------
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH------- 848 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~------- 848 (1003)
-.++.++|+|.+ |-|++|++..+. ..+++..+++.++.|++++++|||+. +++|-|+||+||++.+
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~ 234 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTY 234 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEe
Confidence 577889999998 449999998865 45799999999999999999999999 9999999999999942
Q ss_pred -------------CCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCC
Q 001858 849 -------------DMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGR 915 (1003)
Q Consensus 849 -------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~ 915 (1003)
+..+|++|||.|++.... ....+.|..|.|||++.+-.++.++||||+||||+|+.+|.
T Consensus 235 ~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~ 306 (415)
T KOG0671|consen 235 NPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGE 306 (415)
T ss_pred ccCCccceeccCCCcceEEEecCCcceeccC--------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccc
Confidence 235899999999764221 13467899999999999999999999999999999999999
Q ss_pred CCCCcccCCcc-hhhHHHHhhCchhHHHHH------Hhh-cc--------------cCCCCch---hhHHHHHHHHHHHH
Q 001858 916 RPTHTMFNDGL-TLHGFVKMALPEKVMEIV------DFA-LL--------------LDPGNER---AKIEECLTAVVRIG 970 (1003)
Q Consensus 916 ~P~~~~~~~~~-~~~~~~~~~~~~~~~~~i------~~~-l~--------------~~~~~~~---~~~~~~~~~l~~l~ 970 (1003)
.-|.+-++.+. ...+.+-..+|..+..-. ..+ +. ..+.+.. .........+.+++
T Consensus 307 ~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl 386 (415)
T KOG0671|consen 307 TLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLL 386 (415)
T ss_pred eecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHH
Confidence 99887654331 122222223333322111 111 00 0010000 01123456799999
Q ss_pred hhccccCCCCCCCHHHHHHH
Q 001858 971 VLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 971 ~~cl~~~p~~RPs~~ev~~~ 990 (1003)
++++..||++|+|+.|++.|
T Consensus 387 ~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 387 RRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHccCccccccHHHHhcC
Confidence 99999999999999999876
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.9e-29 Score=241.44 Aligned_cols=266 Identities=19% Similarity=0.294 Sum_probs=198.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCce
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.++|++.+++|+|.|++||.|....++++++||+++.... +.+.+|+.+++.++ ||||++++++... ......
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~D---p~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKD---PESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcC---ccccCc
Confidence 4689999999999999999999988889999999985544 67789999999996 9999999998643 345567
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC-CCeEEccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGL 859 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~DfG~ 859 (1003)
.+|+||+++.+...... .++..++..++.+++.|+.|+|+. ||+|||+||.|+++|.. ..++++|+|+
T Consensus 111 aLiFE~v~n~Dfk~ly~--------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGL 179 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYP--------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGL 179 (338)
T ss_pred hhHhhhhccccHHHHhh--------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecch
Confidence 89999999988777654 477788999999999999999999 99999999999999965 5799999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCC-CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG-GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
|.++.++... .-.+.+..|.-||.+-. ..|+..-|+|||||++..|+..+.||-.......++....+..-.+
T Consensus 180 AEFYHp~~eY------nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~ 253 (338)
T KOG0668|consen 180 AEFYHPGKEY------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTD 253 (338)
T ss_pred HhhcCCCcee------eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChH
Confidence 9987554211 12345677889998765 4678899999999999999999999754333323333332222222
Q ss_pred hHHHHHHhh-cccCCC---------Cchhh-------HHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFA-LLLDPG---------NERAK-------IEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~-l~~~~~---------~~~~~-------~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
++...+.+. +..+|. ..++. ..-..++..+++.+.+.+|..+|||++|...|
T Consensus 254 el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 254 ELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 222222211 111111 00000 00122556777788888999999999999875
No 397
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.1e-28 Score=263.01 Aligned_cols=240 Identities=28% Similarity=0.384 Sum_probs=193.0
Q ss_pred cceEEEEEEECCCCceEEEEEeccccccc-hHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecccCCCHH
Q 001858 715 SFGFVYRGNLGEDLLPVAVKVINLKQKGS-IKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLE 793 (1003)
Q Consensus 715 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 793 (1003)
+||.||+|++.++++.+|+|++....... .+.+.+|++.+++++|+|++++++++. .....++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE-----DEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee-----eCCEEEEEEeCCCCCCHH
Confidence 58999999999889999999997655444 689999999999999999999999853 346789999999999999
Q ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccCc
Q 001858 794 DWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSS 873 (1003)
Q Consensus 794 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 873 (1003)
+++.... .+++.+++.++.+++++++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------ 141 (244)
T smart00220 76 DLLKKRG-----RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG------ 141 (244)
T ss_pred HHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc------
Confidence 9998632 388999999999999999999999 99999999999999999999999999998654321
Q ss_pred ccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCC
Q 001858 874 SSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPG 953 (1003)
Q Consensus 874 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 953 (1003)
......++..|+|||...+..++.++||||+|+++|+|++|..||...... ....+.... ...
T Consensus 142 ~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-------------~~~~~~~~~---~~~- 204 (244)
T smart00220 142 LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-------------LELFKKIGK---PKP- 204 (244)
T ss_pred ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-------------HHHHHHHhc---cCC-
Confidence 222356788999999998888999999999999999999999998653111 111111111 111
Q ss_pred CchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 954 NERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 954 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
........+...+.+++.+|+..+|++||++.+++++
T Consensus 205 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 205 PFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred CCccccccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence 1111111145678899999999999999999999873
No 398
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-30 Score=271.42 Aligned_cols=252 Identities=22% Similarity=0.306 Sum_probs=200.3
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.+++++..||.|+||.|=++..+.....+|+|++++. +....+....|-.+|...+.|.||++|.. |.+..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccchh
Confidence 3455667899999999999998876666888888643 34455678889999999999999999987 678899
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
+|+.||-|-||.++..+++ ++.++...+.-++.-+++|++|||++ +||+||+||+|.+++.+|-+|+.|||+
T Consensus 495 vYmLmEaClGGElWTiLrd-----Rg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRD-----RGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred hhhhHHhhcCchhhhhhhh-----cCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhh
Confidence 9999999999999999998 56788889999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchh
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEK 939 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1003)
|+.+.. ......++||+.|.|||.+.++..+.++|.||+|+++||+++|.+||++..+-..+ ..
T Consensus 567 AKki~~------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktY----------n~ 630 (732)
T KOG0614|consen 567 AKKIGS------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTY----------NL 630 (732)
T ss_pred HHHhcc------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHH----------HH
Confidence 987743 33445689999999999999999999999999999999999999999875321000 00
Q ss_pred HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHHHH
Q 001858 940 VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIH-----MADAVKNLC 992 (1003)
Q Consensus 940 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~L~ 992 (1003)
+..-++..- .+.........++++....+|.+|.- +.||.+|.+
T Consensus 631 ILkGid~i~---------~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 631 ILKGIDKIE---------FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred HHhhhhhhh---------cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 111111111 11122334456666666778888874 667766643
No 399
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.8e-28 Score=280.40 Aligned_cols=275 Identities=18% Similarity=0.192 Sum_probs=183.3
Q ss_pred HhccCCccCeeeeccceEEEEEEEC----------------CCCceEEEEEeccccccchHH--------------HHHH
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLG----------------EDLLPVAVKVINLKQKGSIKS--------------FVAE 750 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 750 (1003)
..++|++.++||+|+||+||+|... ..++.||||.+........++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3678999999999999999999752 234679999987543332233 3446
Q ss_pred HHHHHhcCCCCc-----eeEeeeeeecc---cCCCCceEEeeecccCCCHHHHHhhcCCC-------------------C
Q 001858 751 CEALKNIRHRNL-----IKIITVCSSID---FKGDDFKALVYDYMQSGSLEDWLQQSNDQ-------------------V 803 (1003)
Q Consensus 751 ~~~l~~l~h~ni-----v~~~~~~~~~~---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~ 803 (1003)
+.++.+++|.++ ++++++|.... ...++..++||||+++++|.++++..... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 67777764321 12245679999999999999999753211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccCccccccccccc
Q 001858 804 DGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVG 883 (1003)
Q Consensus 804 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~ 883 (1003)
...+++..++.++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||++..+..... .......+|+.
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~----~~~~~g~~tp~ 375 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN----FNPLYGMLDPR 375 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----cCccccCCCcc
Confidence 12356788899999999999999999 999999999999999999999999999976532211 11111235789
Q ss_pred ccCccccCCCCC--------------------C--ccccchhHHHHHHHHHhCCC-CCCcccCCcchhhHHHHhhCchhH
Q 001858 884 YVAPEYGMGGNV--------------------S--LTGDVYSFGILLLEMFTGRR-PTHTMFNDGLTLHGFVKMALPEKV 940 (1003)
Q Consensus 884 y~aPE~~~~~~~--------------------~--~~sDvwslG~il~ell~g~~-P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1003)
|+|||.+..... + .+.||||+||++|||++|.. ||............ .....
T Consensus 376 Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-----~~~~~ 450 (507)
T PLN03224 376 YSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-----YDNDL 450 (507)
T ss_pred eeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh-----ccchH
Confidence 999998754321 1 24699999999999999876 66532111110000 00111
Q ss_pred HHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCC---CCCCCHHHHHHH
Q 001858 941 MEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESP---SERIHMADAVKN 990 (1003)
Q Consensus 941 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p---~~RPs~~ev~~~ 990 (1003)
..+.. ..... ..............+++.+++..+| .+|+|++|+++|
T Consensus 451 ~~~r~-~~~~~--~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 451 NRWRM-YKGQK--YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred HHHHh-hcccC--CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 11100 00000 0111122334566777778887655 789999999986
No 400
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-29 Score=250.72 Aligned_cols=202 Identities=26% Similarity=0.400 Sum_probs=177.3
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc---cccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK---QKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 777 (1003)
-++|++.++||+|+|+.|..++++.+.+.||+|+++++ +++.+...+.|-.+...- +||.+|.+..+ |..+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hccc
Confidence 46899999999999999999999999999999999844 344556667777777766 79999999887 6778
Q ss_pred CceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccc
Q 001858 778 DFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 857 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 857 (1003)
...+.|.||++||+|--++++ ..+++++.++-+..+|.-|+.|||++ ||++||+|.+|+|+|.+|++|++||
T Consensus 324 srlffvieyv~ggdlmfhmqr-----qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdy 395 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDY 395 (593)
T ss_pred ceEEEEEEEecCcceeeehhh-----hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeeccc
Confidence 889999999999999888877 45799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcc
Q 001858 858 GLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTM 921 (1003)
Q Consensus 858 G~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~ 921 (1003)
|+++.-- ........++||+.|.|||.+.+..|++.+|.|++|++++||+.|+.||+-.
T Consensus 396 gmcke~l-----~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 396 GMCKEGL-----GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred chhhcCC-----CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 9997421 1223334589999999999999999999999999999999999999999753
No 401
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=7.3e-29 Score=268.28 Aligned_cols=212 Identities=24% Similarity=0.333 Sum_probs=179.2
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
.-|..++.||-|+||+|.+++..++...||+|.+++.+ .........|-.|+..-..+=||+++-- |.+++.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCc
Confidence 34677889999999999999999899999999997553 3345667889999999999999999865 788999
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
+|+||||++||++-.++-+ .+-+.+.-++-++.++..|+++.|.. |+|||||||+|||||.+|++||+|||+
T Consensus 704 LYFVMdYIPGGDmMSLLIr-----mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIR-----MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred eEEEEeccCCccHHHHHHH-----hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccc
Confidence 9999999999999998877 46788888899999999999999999 999999999999999999999999999
Q ss_pred ccccc---cCCccccCc----------------------------------ccccccccccccCccccCCCCCCccccch
Q 001858 860 AKFLF---DRPIQETSS----------------------------------SSIGIKGTVGYVAPEYGMGGNVSLTGDVY 902 (1003)
Q Consensus 860 a~~~~---~~~~~~~~~----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvw 902 (1003)
++-+. +..+..... .....+||+.|+|||++....++..+|.|
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdww 855 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWW 855 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhh
Confidence 96442 111111000 00225699999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcccCCcch
Q 001858 903 SFGILLLEMFTGRRPTHTMFNDGLT 927 (1003)
Q Consensus 903 slG~il~ell~g~~P~~~~~~~~~~ 927 (1003)
|.|||||||+.|+.||......+.+
T Consensus 856 s~gvil~em~~g~~pf~~~tp~~tq 880 (1034)
T KOG0608|consen 856 SVGVILYEMLVGQPPFLADTPGETQ 880 (1034)
T ss_pred HhhHHHHHHhhCCCCccCCCCCcce
Confidence 9999999999999999887665443
No 402
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-29 Score=282.69 Aligned_cols=247 Identities=26% Similarity=0.330 Sum_probs=185.7
Q ss_pred ccCeeeeccce-EEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCceEEee
Q 001858 707 LSNLIGQGSFG-FVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 707 ~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
-.+++|.|+.| .||+|... ++.||||.+-.. ......+|+..++.- .|||||++++. ..++.+.|++.
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YIal 582 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYIAL 582 (903)
T ss_pred cHHHcccCCCCcEEEEEeeC--CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEEEe
Confidence 34568999987 68999985 669999987522 234667899999988 69999999987 67788999999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC---C--CCeEEccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---D--MVAHVSDFGL 859 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~---~--~~~kl~DfG~ 859 (1003)
|.|.- +|.|+++..... .......+.+.+..|++.|++|||+. +|||||+||+||||+. + ..++|+|||+
T Consensus 583 ELC~~-sL~dlie~~~~d-~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLD-VEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred hHhhh-hHHHHHhccccc-hhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccc
Confidence 99965 999999985111 11112145678899999999999998 9999999999999976 3 4689999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh-CCCCCCcccCCcchhhHHHHhhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT-GRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
++.+......- .......||.+|+|||.+....-+.++|+||+||++|+.++ |.+||++....+..+
T Consensus 658 sKkl~~~~sS~--~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI---------- 725 (903)
T KOG1027|consen 658 SKKLAGGKSSF--SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI---------- 725 (903)
T ss_pred ccccCCCcchh--hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh----------
Confidence 99886543221 22345679999999999999988899999999999999999 599998643221111
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
..-........+. +++ ...+++.+++.++|..||++.+|+.|
T Consensus 726 --l~~~~~L~~L~~~------~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 726 --LTGNYTLVHLEPL------PDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred --hcCccceeeeccC------chH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 0000001111111 111 56678889999999999999999864
No 403
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=6.7e-29 Score=266.99 Aligned_cols=198 Identities=26% Similarity=0.391 Sum_probs=171.6
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc--------ccchHHHHHHHHHHHhcC---CCCceeEeeeee
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--------KGSIKSFVAECEALKNIR---HRNLIKIITVCS 770 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~ 770 (1003)
..+|...+++|+|+||.|+.|.++.+...|+||.+.++. +...-....|++||..++ |+||+|++++
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf-- 637 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF-- 637 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe--
Confidence 456899999999999999999999999999999986432 111123556999999997 9999999999
Q ss_pred ecccCCCCceEEeeeccc-CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC
Q 001858 771 SIDFKGDDFKALVYDYMQ-SGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 849 (1003)
Q Consensus 771 ~~~~~~~~~~~lv~e~~~-~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~ 849 (1003)
|++++++|++||... +.+|.++|.. ++.+++.++..|+.||+.|+++||+. +|||||||-+|+.++.+
T Consensus 638 ---FEddd~yyl~te~hg~gIDLFd~IE~-----kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 638 ---FEDDDYYYLETEVHGEGIDLFDFIEF-----KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSN 706 (772)
T ss_pred ---eecCCeeEEEecCCCCCcchhhhhhc-----cCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecC
Confidence 788999999999875 4489999987 56799999999999999999999999 99999999999999999
Q ss_pred CCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCC-ccccchhHHHHHHHHHhCCCCCC
Q 001858 850 MVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVS-LTGDVYSFGILLLEMFTGRRPTH 919 (1003)
Q Consensus 850 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~ell~g~~P~~ 919 (1003)
|-+|++|||.|.+...++ ...++||..|+|||++.|.+|- ..-|||++|+++|.++...-||-
T Consensus 707 g~~klidfgsaa~~ksgp-------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKSGP-------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CeEEEeeccchhhhcCCC-------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999999997654333 3347899999999999998874 56899999999999999888863
No 404
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-29 Score=247.14 Aligned_cols=276 Identities=21% Similarity=0.236 Sum_probs=195.5
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
.+-.+.||.|+||.||.+++..+++.||.|++... .-...+++-+|++++..++|.|+...+++..-....--.+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34468999999999999999999999999988632 2334578889999999999999999887643211111134578
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
++|.|.. +|...|-. ...++...+.-+.+||++|++|||+. +|.||||||.|.+++.+-.+||||||+++.
T Consensus 135 ~TELmQS-DLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLART 205 (449)
T ss_pred HHHHHHh-hhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccc
Confidence 9999976 88888866 45788888889999999999999999 999999999999999999999999999987
Q ss_pred cccCCccccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCc-chhhHHHHhhC-chh
Q 001858 863 LFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDG-LTLHGFVKMAL-PEK 939 (1003)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~-~~~~~~~~~~~-~~~ 939 (1003)
..... .......+.|..|.|||.+.|. .|+.+.||||.||++.|++..+.-|....+-+ .++....-... .+.
T Consensus 206 ee~d~----~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~Ea 281 (449)
T KOG0664|consen 206 WDQRD----RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEA 281 (449)
T ss_pred cchhh----hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHH
Confidence 64321 2223334578899999998885 68999999999999999999888886532211 11111111111 111
Q ss_pred HHHHHH----hhcc---cCCCCch----hhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 001858 940 VMEIVD----FALL---LDPGNER----AKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCA 993 (1003)
Q Consensus 940 ~~~~i~----~~l~---~~~~~~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~ 993 (1003)
++..-+ .++. ..|+... .....--.+-..+.+.++..+|++|.+.++.+.++..
T Consensus 282 Mr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 282 MKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred HHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 221111 1111 1111100 0001112234566677889999999999998877543
No 405
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.9e-27 Score=249.40 Aligned_cols=138 Identities=24% Similarity=0.385 Sum_probs=118.9
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcC--------CCCceeEeeeeeecc
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIR--------HRNLIKIITVCSSID 773 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 773 (1003)
.++|.+.++||-|.|++||+|.+.+..+.||+|+.+. .....+..+.|++++++++ ...||++++.+...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs- 154 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS- 154 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec-
Confidence 4789999999999999999999999999999999873 2333466788999999983 24799999987543
Q ss_pred cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC
Q 001858 774 FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 847 (1003)
Q Consensus 774 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~ 847 (1003)
-..+.++++|+|++ |.+|..+|..+. .+.++...+++|++||+.||.|||+.| ||||-||||+|||+.
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~---YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSN---YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhC---CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 35578899999999 559999999876 457899999999999999999999998 999999999999993
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=9.6e-29 Score=270.33 Aligned_cols=255 Identities=21% Similarity=0.331 Sum_probs=209.5
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|+....+|.|.||.||+|+++.+++..|+|+++.+.....+-.++|+-+++..+||||+.++|- +...+..+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gs-----ylr~dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGS-----YLRRDKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhh-----hhhhcCcE
Confidence 4689999999999999999999999999999999998888888889999999999999999999987 45577789
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
++|||+.+|+|.|..+. .+.+.+.++..++++..+|++|||+. +-+|||||-.||++++.|.+|++|||.+.
T Consensus 89 icMEycgggslQdiy~~-----TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsa 160 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSA 160 (829)
T ss_pred EEEEecCCCcccceeee-----cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchh
Confidence 99999999999998766 57899999999999999999999999 89999999999999999999999999996
Q ss_pred ccccCCccccCcccccccccccccCcccc---CCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 862 FLFDRPIQETSSSSIGIKGTVGYVAPEYG---MGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
.+ ..+-.....+.||+.|||||+. ..+.|...+|||+.|+...|+-.-+.|.-+. .|.
T Consensus 161 qi-----tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl--------------hpm 221 (829)
T KOG0576|consen 161 QI-----TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL--------------HPM 221 (829)
T ss_pred hh-----hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc--------------chH
Confidence 54 4455556678999999999974 4567889999999999999999887773221 112
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+...+..+.....|. ..........|.++++.|+..+|.+||+++.+++|
T Consensus 222 r~l~LmTkS~~qpp~--lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 222 RALFLMTKSGFQPPT--LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHhhccCCCCCc--ccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 222222222222221 11112234567888899999999999999987763
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.3e-27 Score=231.87 Aligned_cols=209 Identities=22% Similarity=0.336 Sum_probs=168.2
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCCCCce
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.+.|.+.+.+|+|.||.+-+++++++++.+++|.+.... ...++|.+|...--.+ .|.||+.-+++. |+..+++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceE
Confidence 467899999999999999999999999999999987443 3457888887654445 589999888764 6777888
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeC--CCCCeEEcccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD--HDMVAHVSDFG 858 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~~~kl~DfG 858 (1003)
..++||++.|+|.+-+.. ..+.+....+++.|+++|+.|+|++ .+||||||.+|||+- +..++|+||||
T Consensus 98 vF~qE~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG 168 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFG 168 (378)
T ss_pred EEeeccCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecc
Confidence 999999999999988764 3578888999999999999999999 999999999999994 34489999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCC-----CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHH
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGG-----NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFV 932 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~ 932 (1003)
..+..+.. -...--+..|.|||..... ...+.+|+|.||+++|.+++|+.||+.....+..+..|.
T Consensus 169 ~t~k~g~t--------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~ 239 (378)
T KOG1345|consen 169 LTRKVGTT--------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE 239 (378)
T ss_pred cccccCce--------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHH
Confidence 98754221 1112245679999975432 356789999999999999999999986655555554443
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=8.2e-26 Score=235.02 Aligned_cols=212 Identities=32% Similarity=0.531 Sum_probs=182.8
Q ss_pred eeeccceEEEEEEECCCCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecccC
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQS 789 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 789 (1003)
||+|++|.||++....+++.+++|++...... ..+.+.+|++.++.++|++++++++++ ......++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF-----EDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeee-----ecCCeEEEEEecCCC
Confidence 68999999999999888899999999755432 357899999999999999999999985 334678999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-CCCeEEcccccccccccCCc
Q 001858 790 GSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGLAKFLFDRPI 868 (1003)
Q Consensus 790 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~DfG~a~~~~~~~~ 868 (1003)
++|.+++.... ..+++.+++.++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+........
T Consensus 76 ~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~ 148 (215)
T cd00180 76 GSLKDLLKENE----GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS 148 (215)
T ss_pred CcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc
Confidence 99999998642 4688999999999999999999999 9999999999999999 89999999999976533221
Q ss_pred cccCcccccccccccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhh
Q 001858 869 QETSSSSIGIKGTVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFA 947 (1003)
Q Consensus 869 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 947 (1003)
......+...|++||..... ..+.++|+|++|+++++|
T Consensus 149 -----~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------ 187 (215)
T cd00180 149 -----LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------ 187 (215)
T ss_pred -----hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------
Confidence 12234578899999998877 788999999999999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 948 LLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 948 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 ----------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 4677889999999999999999998753
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=8.2e-27 Score=244.67 Aligned_cols=273 Identities=25% Similarity=0.326 Sum_probs=202.3
Q ss_pred HHhccCCccCeeeeccceEEEEEEECC---CCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccC
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGE---DLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 775 (1003)
...+.|..+++||+|.|++||+|++.. .++.||+|.+...+.. .+..+|++++.++ .+.||+++.++ +.
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~-----~r 105 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGC-----FR 105 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhh-----hc
Confidence 345678999999999999999999876 6788999999755443 6788999999999 58999999998 67
Q ss_pred CCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-CCCeEE
Q 001858 776 GDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHV 854 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl 854 (1003)
.++.+.+|+||++.....++... ++..++..+++.+..||+|+|.. |||||||||+|++.+. .+.-.|
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceE
Confidence 78899999999999999998764 66888999999999999999999 9999999999999984 567899
Q ss_pred cccccccccccCC------------c-c--------------------------ccCcccccccccccccCccccCCC-C
Q 001858 855 SDFGLAKFLFDRP------------I-Q--------------------------ETSSSSIGIKGTVGYVAPEYGMGG-N 894 (1003)
Q Consensus 855 ~DfG~a~~~~~~~------------~-~--------------------------~~~~~~~~~~gt~~y~aPE~~~~~-~ 894 (1003)
.|||+|....... . . ..........||++|.|||++... .
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~ 254 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR 254 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccC
Confidence 9999997321100 0 0 000111235699999999998764 6
Q ss_pred CCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHH---------------------HHH-------h
Q 001858 895 VSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVME---------------------IVD-------F 946 (1003)
Q Consensus 895 ~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~i~-------~ 946 (1003)
.++++||||.|+|++-++++++||-....+-..+.+.+...-+..+.. ... .
T Consensus 255 QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~ 334 (418)
T KOG1167|consen 255 QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIE 334 (418)
T ss_pred cCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChh
Confidence 789999999999999999999998654443222222111111111100 000 1
Q ss_pred hcccCCC---CchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 947 ALLLDPG---NERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 947 ~l~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
.+..... .+....+..+...+++..+|+..+|.+|.+++|.++|
T Consensus 335 ~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 335 SIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred hcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 1111111 1122223334478899999999999999999999975
No 410
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=6.6e-27 Score=248.42 Aligned_cols=273 Identities=21% Similarity=0.302 Sum_probs=207.2
Q ss_pred HHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcC------CCCceeEeeeeeec
Q 001858 699 NKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIR------HRNLIKIITVCSSI 772 (1003)
Q Consensus 699 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~ 772 (1003)
..-..+|.+....|+|-|++|.+|.+...+..||||++... +...+.=+.|++++++++ --|+++++..
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~---- 502 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRH---- 502 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH----
Confidence 34567899999999999999999999988899999999843 334466678999999994 3466777665
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-C
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-V 851 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~ 851 (1003)
|....++|+|||.+.- +|.+++++.+. .-.+...++..++.|+.-||..|-.. +|+|+||||.||||.+.. .
T Consensus 503 -F~hknHLClVFE~Lsl-NLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 503 -FKHKNHLCLVFEPLSL-NLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNI 575 (752)
T ss_pred -hhhcceeEEEehhhhc-hHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcce
Confidence 6778899999999855 99999999765 34588899999999999999999998 999999999999998764 6
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcc-hhhH
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGL-TLHG 930 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~-~~~~ 930 (1003)
+||||||.|....+.... .+..+..|.|||.+.|-.|+...|+||.||+|||+.||+.-|.+..+..+ .+.-
T Consensus 576 LKLCDfGSA~~~~eneit-------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m 648 (752)
T KOG0670|consen 576 LKLCDFGSASFASENEIT-------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM 648 (752)
T ss_pred eeeccCcccccccccccc-------HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH
Confidence 799999999876543322 24456789999999999999999999999999999999999987554321 1111
Q ss_pred HHHhhCchhHHH---H------------------------HHhhcccCCCC-----------chhhHHHHHHHHHHHHhh
Q 001858 931 FVKMALPEKVME---I------------------------VDFALLLDPGN-----------ERAKIEECLTAVVRIGVL 972 (1003)
Q Consensus 931 ~~~~~~~~~~~~---~------------------------i~~~l~~~~~~-----------~~~~~~~~~~~l~~l~~~ 972 (1003)
-++..+|..+.. + +..+....|.. ...........+..+..+
T Consensus 649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdk 728 (752)
T KOG0670|consen 649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDK 728 (752)
T ss_pred HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 112222222111 0 00111111100 111223456778899999
Q ss_pred ccccCCCCCCCHHHHHHH
Q 001858 973 CSMESPSERIHMADAVKN 990 (1003)
Q Consensus 973 cl~~~p~~RPs~~ev~~~ 990 (1003)
|+..||++|.+..++++|
T Consensus 729 ml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 729 MLILDPEKRITVNQALKH 746 (752)
T ss_pred HhccChhhcCCHHHHhcC
Confidence 999999999999999876
No 411
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=5.2e-28 Score=249.64 Aligned_cols=407 Identities=20% Similarity=0.230 Sum_probs=231.2
Q ss_pred CCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCC-ccCCCCCCC-c
Q 001858 163 EIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAE-NNFSGMLPP-I 240 (1003)
Q Consensus 163 ~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~~~-~ 240 (1003)
+||..+. ..-..++|..|+|+..-|..|+.+++|+.|||++|.|+.+-|++|..+.+|..|-+.+ |+|+.++.. +
T Consensus 60 eVP~~LP---~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F 136 (498)
T KOG4237|consen 60 EVPANLP---PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAF 136 (498)
T ss_pred cCcccCC---CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHh
Confidence 6666554 3567889999999966667889999999999999999999999999999988877666 888877665 3
Q ss_pred ccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCccc
Q 001858 241 FNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNIT 320 (1003)
Q Consensus 241 ~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 320 (1003)
.++.+|+.|.+.-|++. .++...++.+++|..|.+.+|.+..+--.+|..+.+++.+.+..|.+.. ..+++.+.
T Consensus 137 ~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dCnL~wla 210 (498)
T KOG4237|consen 137 GGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DCNLPWLA 210 (498)
T ss_pred hhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----ccccchhh
Confidence 45777777777777777 6777777777777777777777773333377777777777777776320 01111111
Q ss_pred EEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCccccccc-ccccccccccccccCc-ccccccCCCCcc
Q 001858 321 RLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANL-STITIIAMGLNQISGT-IPLEIRNLANIY 398 (1003)
Q Consensus 321 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~n~l~~~-~p~~~~~l~~L~ 398 (1003)
.- +.-| +..++......-..+.++++...-+..|... ..+..=..+.+..-++ ....|..+++|+
T Consensus 211 ~~-~a~~------------~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~ 277 (498)
T KOG4237|consen 211 DD-LAMN------------PIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLR 277 (498)
T ss_pred hH-Hhhc------------hhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccce
Confidence 00 0000 1112222233333333444433222222211 1111111111111112 223455666666
Q ss_pred EEEcccccccccCCCccccccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCCeeeccCcc
Q 001858 399 ALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNK 478 (1003)
Q Consensus 399 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 478 (1003)
.|+|++|+|+++-+.+|.++..++.|.|..|+|..+....|.++..|+.|+|.+|+|+..-|.+|..+.+|.+|+|-.|.
T Consensus 278 ~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np 357 (498)
T KOG4237|consen 278 KLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNP 357 (498)
T ss_pred EeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCc
Confidence 66666666665555666666666666666666655555555666666666666666665555666666666666665555
Q ss_pred ccCCC-chhhhhh--------------ccccccccCCCCcccc---cccccc---------ccccccccc-ccccccccc
Q 001858 479 LTGTL-PPQILEI--------------TTLSSLLDLSSNLISG---SIPLVV---------GNLKNLIQL-DISRNRFSG 530 (1003)
Q Consensus 479 l~~~~-p~~~~~~--------------~~l~~~l~L~~N~l~~---~~p~~~---------~~l~~L~~L-~Ls~N~l~~ 530 (1003)
+...- -.++.++ +....-+.++++.+.. ..|++. ..++-+... .-|++.++
T Consensus 358 ~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk- 436 (498)
T KOG4237|consen 358 FNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK- 436 (498)
T ss_pred ccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-
Confidence 53110 0111111 0011112222222110 011111 112223222 23333333
Q ss_pred ccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCCcccccCCCccceEecCCC
Q 001858 531 EIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYLNLSYN 598 (1003)
Q Consensus 531 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 598 (1003)
.+|..+. ..-.+|++.+|.++ .+|.+ .+.+| .+|+|+|+|+..-...|.+++.|.+|-+++|
T Consensus 437 ~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 437 LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 5555443 24467888888888 67766 66777 8888888888666677888888888888776
No 412
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=1.5e-26 Score=233.27 Aligned_cols=267 Identities=22% Similarity=0.226 Sum_probs=197.1
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEecc--ccccchHHHHHHHHHHHhcCCCCceeEeeeeeeccc-CCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINL--KQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDF-KGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 778 (1003)
..+|.-.+.+|.|+- .|-.|.+.-.+++||+|.... ......++..+|...+..+.|+|+++++.++.-... ....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 457777888999998 888899988899999998752 234456788899999999999999999998643221 2234
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..|+|||+|.. +|.+.+.. .++-..+..+..|++.|++|+|+. +|+|||+||+||++..+..+||.|||
T Consensus 95 e~y~v~e~m~~-nl~~vi~~-------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVILM-------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred hHHHHHHhhhh-HHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccch
Confidence 56899999976 99999874 356677889999999999999999 99999999999999999999999999
Q ss_pred cccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh---
Q 001858 859 LAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA--- 935 (1003)
Q Consensus 859 ~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~--- 935 (1003)
+|+..... -.....+.|..|.|||++.+..+...+||||.||++.||++|+.-|.+. ..+.+|.+..
T Consensus 164 ~ar~e~~~------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~----d~idQ~~ki~~~l 233 (369)
T KOG0665|consen 164 LARTEDTD------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK----DHIDQWNKIIEQL 233 (369)
T ss_pred hhcccCcc------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc----hHHHHHHHHHHHh
Confidence 99754221 2334567899999999999988999999999999999999999887642 2222222211
Q ss_pred ----------CchhHHHHHHhh----------cccCCC--CchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 ----------LPEKVMEIVDFA----------LLLDPG--NERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ----------~~~~~~~~i~~~----------l~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
+.+-....+... ...+.. ...+...-.......++.+++..+|++|.+++++++|
T Consensus 234 gtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 234 GTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred cCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 111111111100 000000 0000000112345677889999999999999999986
No 413
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=3e-25 Score=233.58 Aligned_cols=200 Identities=33% Similarity=0.503 Sum_probs=172.3
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccccc-chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEe
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG-SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
|++.+.||+|++|.||+|....+++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++ ......+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVF-----EDPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeee-----ecCCceEEE
Confidence 56778999999999999999988899999999865544 568899999999999999999999985 345678999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
+||+++++|.+++..... .+++.+++.++.+++.+++|+|+. +++|+|++|+||+++.++.++++|||.+...
T Consensus 76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~ 148 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGG----KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFI 148 (225)
T ss_pred EeccCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEe
Confidence 999999999999987431 178999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCccccCcccccccccccccCcccc-CCCCCCccccchhHHHHHHHHHhCCCCCCc
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYG-MGGNVSLTGDVYSFGILLLEMFTGRRPTHT 920 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~ell~g~~P~~~ 920 (1003)
.... ........++..|++||.. ....++.++|||++|++++||++|+.||..
T Consensus 149 ~~~~----~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 149 HRDL----AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cCcc----cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 4332 0112234578889999998 666788899999999999999999999965
No 414
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2.3e-23 Score=210.76 Aligned_cols=265 Identities=20% Similarity=0.250 Sum_probs=200.5
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCceE
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
-.|+++++||+|.||++|.|+.--++++||||.-...++ ..++..|++..+.+. .+.|..++-|. .++.+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeec-----cccchhh
Confidence 479999999999999999999988999999998764443 378889999999994 68998888763 4456668
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-----CeEEcc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-----VAHVSD 856 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-----~~kl~D 856 (1003)
+|+|.+ |-||.|+..-+ ++.++...+..+|.|++.-++|+|++ ..|+|||||+|+||+..+ .+.++|
T Consensus 101 LVidLL-GPSLEDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiD 172 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLC----GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIID 172 (449)
T ss_pred hhhhhh-CcCHHHHHHHh----cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEe
Confidence 999998 66999998876 56899999999999999999999999 999999999999997543 589999
Q ss_pred cccccccccCCcccc--CcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh
Q 001858 857 FGLAKFLFDRPIQET--SSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM 934 (1003)
Q Consensus 857 fG~a~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~ 934 (1003)
||+|+.+.+...... ........||.+||+-....+.+.+.+.|+-|+|.++.+.+.|..||++...+....
T Consensus 173 FGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~------ 246 (449)
T KOG1165|consen 173 FGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKE------ 246 (449)
T ss_pred ccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHH------
Confidence 999998876543321 223345679999999999999999999999999999999999999999876542211
Q ss_pred hCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 935 ALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
..+.+-+. ....+...-.+..+.+|..-++-.-..+-.+-|..+-+..-+..+.
T Consensus 247 ----kYeKIGe~---Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 247 ----KYEKIGET---KRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred ----HHHHhccc---cccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 01111110 1111112222334445555555555566677777665555444443
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.4e-23 Score=268.23 Aligned_cols=364 Identities=19% Similarity=0.226 Sum_probs=239.3
Q ss_pred CCcEEEEEeecCCCCc-cc-CccccCCCCCcEEEcCCCC------CCCCCchhhcccc-cCcEEEecccccccccCccCc
Q 001858 75 HPRVIQLYLRNQSVGG-FL-SPYVGNLSFLRFINLASNN------LHGEIPNELGRLS-RLKVLVLDFNSFSGTIPSNLS 145 (1003)
Q Consensus 75 ~~~v~~l~l~~~~~~g-~~-~~~l~~l~~L~~L~L~~n~------~~g~ip~~l~~l~-~L~~L~Ls~n~l~g~ip~~l~ 145 (1003)
+.+|..+.|.-..+.. .+ +.++.++++|++|.+..+. +...+|..+..++ +|+.|++.++.+. .+|..+
T Consensus 531 ~~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f- 608 (1153)
T PLN03210 531 TKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF- 608 (1153)
T ss_pred cceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-
Confidence 3456666554333321 12 2357889999999997653 3446788887764 6999999999987 889888
Q ss_pred CCCCCceeecccccccCCCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCe
Q 001858 146 HCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNF 225 (1003)
Q Consensus 146 ~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 225 (1003)
...+|+.|++++|++. .+|..+.. +++|+.|+|+++...+.+|. ++.+++|++|+|++|.....+|..+.++++|+.
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~~-l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~ 685 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVHS-LTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLED 685 (1153)
T ss_pred CccCCcEEECcCcccc-cccccccc-CCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCE
Confidence 5789999999999987 67776654 47899999998765557774 888999999999988766788989999999999
Q ss_pred EecCCccCCCCCCCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccCccc
Q 001858 226 LSVAENNFSGMLPPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHF 305 (1003)
Q Consensus 226 L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 305 (1003)
|++++|..-+.+|...++++|+.|++++|...+.+|.. .++|++|++++|.++ .+|..+ .+++|+.|++.++..
T Consensus 686 L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~ 759 (1153)
T PLN03210 686 LDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKS 759 (1153)
T ss_pred EeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-cccccccccccccch
Confidence 99988754434444335556666666655444344421 234555555555554 334333 344444444443322
Q ss_pred cCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccC
Q 001858 306 SGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISG 385 (1003)
Q Consensus 306 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 385 (1003)
.... . .+.... ......+++|+.|+|++|...+.+|..++++++|+.|++++|..-+
T Consensus 760 ~~l~-~----------------~~~~l~------~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~ 816 (1153)
T PLN03210 760 EKLW-E----------------RVQPLT------PLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLE 816 (1153)
T ss_pred hhcc-c----------------cccccc------hhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcC
Confidence 1100 0 000000 0011234677888888877766777778888888888887775444
Q ss_pred cccccccCCCCccEEEcccccccccCCCccccccccceeccccccccccccccccCCCccceeecccc-cccccCCcccc
Q 001858 386 TIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFN-NLQGNIPSSLG 464 (1003)
Q Consensus 386 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~~~ 464 (1003)
.+|..+ ++++|+.|++++|.....+|.. .++|+.|+|++|.++ .+|.++..+++|+.|+|++| ++. .+|..+.
T Consensus 817 ~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~ 890 (1153)
T PLN03210 817 TLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNIS 890 (1153)
T ss_pred eeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccc
Confidence 566555 6777888888876544444443 346777788888777 56777777788888888773 444 5666777
Q ss_pred CCCCCCeeeccCcc
Q 001858 465 NCKNLMLLNVSKNK 478 (1003)
Q Consensus 465 ~l~~L~~L~ls~N~ 478 (1003)
.+++|+.+++++|.
T Consensus 891 ~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 891 KLKHLETVDFSDCG 904 (1153)
T ss_pred cccCCCeeecCCCc
Confidence 77777777777764
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=2.1e-23 Score=266.49 Aligned_cols=312 Identities=21% Similarity=0.211 Sum_probs=177.5
Q ss_pred CcCCCCCceeeccccc------ccCCCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccc
Q 001858 144 LSHCSNLINFSVRRNN------LTGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESL 217 (1003)
Q Consensus 144 l~~l~~L~~L~l~~N~------l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l 217 (1003)
+..+.+|+.|.+..+. +...+|..+..+..+|+.|++.++.++ .+|..+ .+.+|++|++++|++. .+|+.+
T Consensus 554 F~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~ 630 (1153)
T PLN03210 554 FKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGV 630 (1153)
T ss_pred HhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccccc
Confidence 4455666666554442 223445544444445666666666665 566655 3566667777776666 456666
Q ss_pred cCCCCCCeEecCCccCCCCCCCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCcCccccccccchh
Q 001858 218 GQLRDLNFLSVAENNFSGMLPPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVI 297 (1003)
Q Consensus 218 ~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 297 (1003)
..+++|+.|+|++|..-..+|.+..+++|+.|++++|.....+|..+. ++++|+.|++++|...+.+|..+ ++++|+.
T Consensus 631 ~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~-~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~ 708 (1153)
T PLN03210 631 HSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQ-YLNKLEDLDMSRCENLEILPTGI-NLKSLYR 708 (1153)
T ss_pred ccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhh-ccCCCCEEeCCCCCCcCccCCcC-CCCCCCE
Confidence 666677777776655444455555566666666666555456666654 67777777777765444566554 5677777
Q ss_pred hhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCC-------CCCccccccc
Q 001858 298 LNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFG-------GSLPRSIANL 370 (1003)
Q Consensus 298 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~-------~~~p~~~~~l 370 (1003)
|++++|...+..|. ..++|++|++++|.+..++.. ..+++|++|++.++... ...+..+...
T Consensus 709 L~Lsgc~~L~~~p~---~~~nL~~L~L~~n~i~~lP~~--------~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~ 777 (1153)
T PLN03210 709 LNLSGCSRLKSFPD---ISTNISWLDLDETAIEEFPSN--------LRLENLDELILCEMKSEKLWERVQPLTPLMTMLS 777 (1153)
T ss_pred EeCCCCCCcccccc---ccCCcCeeecCCCcccccccc--------ccccccccccccccchhhccccccccchhhhhcc
Confidence 77777654433332 235677777777776654421 13556666666653321 1111222233
Q ss_pred ccccccccccccccCcccccccCCCCccEEEcccccccccCCCccccccccceeccccccccccccccccCCCccceeec
Q 001858 371 STITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWL 450 (1003)
Q Consensus 371 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 450 (1003)
++|+.|++++|.....+|..++++++|+.|++++|..-+.+|..+ .+++|+.|++++|.....+|.. .++|+.|+|
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~L 853 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNL 853 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeEC
Confidence 456666666665555566666666666666666554333455444 4556666666665433333332 245566666
Q ss_pred ccccccccCCccccCCCCCCeeeccC
Q 001858 451 GFNNLQGNIPSSLGNCKNLMLLNVSK 476 (1003)
Q Consensus 451 ~~N~l~~~~p~~~~~l~~L~~L~ls~ 476 (1003)
++|.++ .+|..+..+++|+.|++++
T Consensus 854 s~n~i~-~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 854 SRTGIE-EVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred CCCCCc-cChHHHhcCCCCCEEECCC
Confidence 666665 4555566666666666655
No 417
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=2.3e-23 Score=210.12 Aligned_cols=170 Identities=21% Similarity=0.238 Sum_probs=131.8
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCcc
Q 001858 790 GSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQ 869 (1003)
Q Consensus 790 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 869 (1003)
|+|.++++.. +..+++.+++.++.|++.|++|||++ + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc--
Confidence 6899999864 34699999999999999999999998 5 999999999999999 99997653211
Q ss_pred ccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcc
Q 001858 870 ETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALL 949 (1003)
Q Consensus 870 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 949 (1003)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......+.....
T Consensus 64 --------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~------------~~~~~~~~~~~~~ 123 (176)
T smart00750 64 --------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL------------SAILEILLNGMPA 123 (176)
T ss_pred --------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh------------cHHHHHHHHHhcc
Confidence 25889999999999999999999999999999999999998653221 1122223332222
Q ss_pred cCCCCchhhHHHHHH--HHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 950 LDPGNERAKIEECLT--AVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 950 ~~~~~~~~~~~~~~~--~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
..+.. +........ .+.+++.+||+.+|++||++.|+++++.....+
T Consensus 124 ~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 124 DDPRD-RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred CCccc-cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 22211 112223333 689999999999999999999999999877654
No 418
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.90 E-value=2.3e-23 Score=248.05 Aligned_cols=312 Identities=23% Similarity=0.347 Sum_probs=191.5
Q ss_pred CCHhHHHHHHHHHHhcCCCCCCCCC----CCCCCCCCceee----------------EEeCCCCCcEEEEEeecCCCCcc
Q 001858 32 SNETDRVALLAIKSQLQDPMGITSS----WNNSINVCQWTG----------------VTCGQRHPRVIQLYLRNQSVGGF 91 (1003)
Q Consensus 32 ~~~~~~~al~~~k~~~~d~~~~~~s----W~~~~~~c~w~g----------------v~c~~~~~~v~~l~l~~~~~~g~ 91 (1003)
..++|.+++++..+.+.-|. .+++ |++.+++|.=.. |.|.. +.|+.+..-+......
T Consensus 60 ~~~~~~~~~~~~~~~l~~p~-~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g~~~~~~ 136 (754)
T PRK15370 60 ASPEEIKSKFECLRMLAFPA-YADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTESEQASS 136 (754)
T ss_pred CCHHHHHHHHHHHHHhcCCc-hhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--Cccccccccccccccc
Confidence 55789999999999997663 4566 999999995444 77743 4666665443211110
Q ss_pred c--------------------Cc--------c-----ccCCCCCcEEEcCCCCCCCCCchhhcccccCcEEEeccccccc
Q 001858 92 L--------------------SP--------Y-----VGNLSFLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSG 138 (1003)
Q Consensus 92 ~--------------------~~--------~-----l~~l~~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g 138 (1003)
- ++ . -+-..+...|+|++++++ .+|..+. ..|+.|+|++|+|+
T Consensus 137 ~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt- 212 (754)
T PRK15370 137 ASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK- 212 (754)
T ss_pred CCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-
Confidence 0 00 0 012245677888888777 6777664 46788888888887
Q ss_pred ccCccCcCCCCCceeecccccccCCCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCccccc
Q 001858 139 TIPSNLSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLG 218 (1003)
Q Consensus 139 ~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~ 218 (1003)
.+|..+. ++|++|++++|+++ .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|++++|+|+ .+|+.+.
T Consensus 213 sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~ 282 (754)
T PRK15370 213 SLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP 282 (754)
T ss_pred cCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC
Confidence 5776654 47888888888877 6676543 46778888888877 6676654 46778888888777 4666554
Q ss_pred CCCCCCeEecCCccCCCCCCCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCcCccccccccchhh
Q 001858 219 QLRDLNFLSVAENNFSGMLPPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVIL 298 (1003)
Q Consensus 219 ~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 298 (1003)
.+|+.|++++|++++.++.+. ++|+.|++++|+++ .+|..+. ++|++|++++|.+++ +|..+.
T Consensus 283 --~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~Lt~-LP~~l~-------- 345 (754)
T PRK15370 283 --EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLT-ALPETLP---PGLKTLEAGENALTS-LPASLP-------- 345 (754)
T ss_pred --CCCcEEECCCCccccCcccch--hhHHHHHhcCCccc-cCCcccc---ccceeccccCCcccc-CChhhc--------
Confidence 467778888877776543322 35666666666665 3443332 345555555555542 333221
Q ss_pred hccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCccccccccccccccc
Q 001858 299 NLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAM 378 (1003)
Q Consensus 299 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 378 (1003)
++|+.|++++|+|+.++.. + .++|++|+|++|+++ .+|..+. ..|+.|++
T Consensus 346 ------------------~sL~~L~Ls~N~L~~LP~~-------l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdL 395 (754)
T PRK15370 346 ------------------PELQVLDVSKNQITVLPET-------L--PPTITTLDVSRNALT-NLPENLP--AALQIMQA 395 (754)
T ss_pred ------------------CcccEEECCCCCCCcCChh-------h--cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhh
Confidence 3555555555555543211 1 146677777777766 3444433 25666777
Q ss_pred ccccccCcccc----cccCCCCccEEEccccccc
Q 001858 379 GLNQISGTIPL----EIRNLANIYALGLEYNQLT 408 (1003)
Q Consensus 379 ~~n~l~~~~p~----~~~~l~~L~~L~L~~N~l~ 408 (1003)
++|+++ .+|. .++.++++..|++.+|.+.
T Consensus 396 s~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 396 SRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred ccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 777666 3333 3344566677777777665
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.5e-23 Score=247.54 Aligned_cols=267 Identities=25% Similarity=0.305 Sum_probs=157.5
Q ss_pred CCCcEEEcCCCCCCCCCchhhcccccCcEEEecccccccccCccCcCCCCCceeecccccccCCCCccccccccccceEE
Q 001858 100 SFLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLN 179 (1003)
Q Consensus 100 ~~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~ 179 (1003)
..-..|||++|+++ .+|+.+.. +|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|... .+|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~~--~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~lp----~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVLP----PGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchhc--CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCcc----cccceee
Confidence 34566777777777 67777653 6777777777777 46653 467777777777777 556432 4677777
Q ss_pred ccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCCcccCCchhHHhhcccccCCC
Q 001858 180 VAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFNISSLEQISLLTNRFEGR 259 (1003)
Q Consensus 180 L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~ 259 (1003)
|++|.++ .+|... ++|+.|++++|+++ .+|.. +++|++|+|++|++++.++. ..+|+.|++++|+++ .
T Consensus 269 Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~Lp~l---p~~L~~L~Ls~N~L~-~ 336 (788)
T PRK15387 269 IFSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASLPAL---PSELCKLWAYNNQLT-S 336 (788)
T ss_pred ccCCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCccccCCCC---cccccccccccCccc-c
Confidence 7777776 455432 45667777777776 34542 35677777777777654321 123445555555554 2
Q ss_pred CCcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhh
Q 001858 260 LPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDF 339 (1003)
Q Consensus 260 lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 339 (1003)
+|.. ..+|++|+|++|+|++ +|.. .++|+.|++++|+|+.++.
T Consensus 337 LP~l----p~~Lq~LdLS~N~Ls~-LP~l---------------------------p~~L~~L~Ls~N~L~~LP~----- 379 (788)
T PRK15387 337 LPTL----PSGLQELSVSDNQLAS-LPTL---------------------------PSELYKLWAYNNRLTSLPA----- 379 (788)
T ss_pred cccc----ccccceEecCCCccCC-CCCC---------------------------CcccceehhhccccccCcc-----
Confidence 3321 1244455555555442 2321 1234444555555443221
Q ss_pred HhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCcccccc
Q 001858 340 ITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELI 419 (1003)
Q Consensus 340 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 419 (1003)
...+|+.|++++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+.+++
T Consensus 380 -----l~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~ 445 (788)
T PRK15387 380 -----LPSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLS 445 (788)
T ss_pred -----cccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhcc
Confidence 01345555666665553 3322 2355666666666663 3432 235677788888887 6777788888
Q ss_pred ccceeccccccccccccccccC
Q 001858 420 NLQALDFSANNLHGIIPDSIGN 441 (1003)
Q Consensus 420 ~L~~L~Ls~N~l~~~~~~~~~~ 441 (1003)
+|+.|+|++|+|++..+..+..
T Consensus 446 ~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 446 SETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred CCCeEECCCCCCCchHHHHHHH
Confidence 8888888888888776665533
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=2.8e-23 Score=245.28 Aligned_cols=269 Identities=28% Similarity=0.308 Sum_probs=159.3
Q ss_pred ccCcEEEecccccccccCccCcCCCCCceeecccccccCCCCccccccccccceEEccCcccccccCCCCCCCCCcceee
Q 001858 124 SRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLG 203 (1003)
Q Consensus 124 ~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~ 203 (1003)
..-..|+|+.|.|+ .+|+.+. ++|+.|++++|+++ .+|.. .++|++|+|++|+++ .+|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l----p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL----PPELRTLEVSGNQLT-SLPVL---PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC----CCCCcEEEecCCccC-cccCc---ccccceee
Confidence 34556777777777 6777665 36777777777776 45542 245666666666666 34532 24555566
Q ss_pred eeccccCCCCcccccCCCCCCeEecCCccCCCCCCCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCccccc
Q 001858 204 VGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTG 283 (1003)
Q Consensus 204 L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~ 283 (1003)
+++|.++ .+|..+ .+|+.|++++|+++. +|. ..++|++|+|++|+|++
T Consensus 269 Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~------------------------LP~----~p~~L~~LdLS~N~L~~ 316 (788)
T PRK15387 269 IFSNPLT-HLPALP---SGLCKLWIFGNQLTS------------------------LPV----LPPGLQELSVSDNQLAS 316 (788)
T ss_pred ccCCchh-hhhhch---hhcCEEECcCCcccc------------------------ccc----cccccceeECCCCcccc
Confidence 6666555 333322 334455555555442 221 12456666666666653
Q ss_pred CcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCC
Q 001858 284 SIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSL 363 (1003)
Q Consensus 284 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 363 (1003)
+|... .+|+.|++++|+|++++. ...+|++|+|++|+|+.+
T Consensus 317 -Lp~lp---~~L~~L~Ls~N~L~~LP~----lp~~Lq~LdLS~N~Ls~L------------------------------- 357 (788)
T PRK15387 317 -LPALP---SELCKLWAYNNQLTSLPT----LPSGLQELSVSDNQLASL------------------------------- 357 (788)
T ss_pred -CCCCc---ccccccccccCccccccc----cccccceEecCCCccCCC-------------------------------
Confidence 33321 245555666666553221 112455555555554433
Q ss_pred cccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCccccccccceeccccccccccccccccCCC
Q 001858 364 PRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLS 443 (1003)
Q Consensus 364 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 443 (1003)
|.. ..+|+.|++++|+|+. +|.. ..+|+.|++++|+|++ +|... ++|+.|++++|+|++ +|.. ..
T Consensus 358 P~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l~---s~L~~LdLS~N~Lss-IP~l---~~ 422 (788)
T PRK15387 358 PTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVLP---SELKELMVSGNRLTS-LPML---PS 422 (788)
T ss_pred CCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCcc---cCCCEEEccCCcCCC-CCcc---hh
Confidence 221 1234445555555553 3332 2467788888888873 55432 568888889888884 5543 34
Q ss_pred ccceeecccccccccCCccccCCCCCCeeeccCccccCCCchhhhhhc
Q 001858 444 TLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEIT 491 (1003)
Q Consensus 444 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~ 491 (1003)
+|+.|++++|+|+ .+|..+.++++|+.|+|++|+|++..|..+..+.
T Consensus 423 ~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l~ 469 (788)
T PRK15387 423 GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 469 (788)
T ss_pred hhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHHh
Confidence 6788999999998 7888899999999999999999987777664443
No 421
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3.5e-22 Score=221.04 Aligned_cols=267 Identities=21% Similarity=0.237 Sum_probs=198.0
Q ss_pred cCCccCeeeeccceEEEEEEECCCC-ceEEEEEeccccccchHHHHHHHHHHHhcCC----CCceeEeeeeeecccCCCC
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDL-LPVAVKVINLKQKGSIKSFVAECEALKNIRH----RNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~ 778 (1003)
+|.+.++||+|+||.||.|.+..++ ..+|+|............+..|..++..+.. +++.++++... ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 8999999999999999999997664 6789998875544333378889999998863 68888887732 3567
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC-----CCeE
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-----MVAH 853 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~-----~~~k 853 (1003)
+.++||+.+ |.+|.++..... .+.++...+.+++.|++.+|+++|+. |++||||||.|+.++.. ..+.
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ 167 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLY 167 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEE
Confidence 789999988 669999887654 46899999999999999999999999 99999999999999865 4699
Q ss_pred Eccccccc--ccccCCc---cccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchh
Q 001858 854 VSDFGLAK--FLFDRPI---QETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTL 928 (1003)
Q Consensus 854 l~DfG~a~--~~~~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~ 928 (1003)
+.|||+|+ .+..... .........+.||.+|++++++.+...+++.|+||++.++.|+..|..||.........
T Consensus 168 llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~- 246 (322)
T KOG1164|consen 168 LLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK- 246 (322)
T ss_pred EEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH-
Confidence 99999998 3322221 11111134567999999999999999999999999999999999999999665432110
Q ss_pred hHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHhh
Q 001858 929 HGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAREK 997 (1003)
Q Consensus 929 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~~~ 997 (1003)
.............. ........+.++...+-..+..++|....+.+.++.....
T Consensus 247 ---------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 247 ---------SKFEKDPRKLLTDR------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred ---------HHHHHHhhhhcccc------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 01111111111110 0011123455555555567899999999999887766554
No 422
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=1.1e-23 Score=261.47 Aligned_cols=205 Identities=17% Similarity=0.231 Sum_probs=139.6
Q ss_pred hcCC-CCceeEeeeeeecc--cCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 001858 756 NIRH-RNLIKIITVCSSID--FKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQP 832 (1003)
Q Consensus 756 ~l~h-~niv~~~~~~~~~~--~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 832 (1003)
.++| +||+++++++.... ..+.+..+.++||++ ++|.+++... ...+++.+++.++.||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~--- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHSQ--- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHhC---
Confidence 4455 57777777653221 122345677889884 5999999753 34689999999999999999999999
Q ss_pred CcEeccCCCCceEeCC-------------------CCCeEEcccccccccccCCc---c--------ccCcccccccccc
Q 001858 833 PIVHGDLKPSNVLLDH-------------------DMVAHVSDFGLAKFLFDRPI---Q--------ETSSSSIGIKGTV 882 (1003)
Q Consensus 833 ~ivH~Dikp~Nill~~-------------------~~~~kl~DfG~a~~~~~~~~---~--------~~~~~~~~~~gt~ 882 (1003)
+|+||||||+|||++. ++.+|++|||+++....... . ..........||+
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 9999999999999954 44566666666654211000 0 0000111245899
Q ss_pred cccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHH
Q 001858 883 GYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEEC 962 (1003)
Q Consensus 883 ~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 962 (1003)
.|||||++.+..++.++|||||||++|||++|..|+..... .......... +.. ....
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---------------~~~~~~~~~~---~~~----~~~~ 237 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---------------TMSSLRHRVL---PPQ----ILLN 237 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---------------HHHHHHHhhc---Chh----hhhc
Confidence 99999999999999999999999999999998887542110 0001111000 100 0011
Q ss_pred HHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 963 LTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 963 ~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
......++.+|++++|.+||++.|++++
T Consensus 238 ~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 238 WPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred CHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 2334577789999999999999999875
No 423
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.1e-22 Score=196.83 Aligned_cols=209 Identities=25% Similarity=0.333 Sum_probs=173.7
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCC-CCceeEeeeeeecccCCCCc
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRH-RNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 779 (1003)
..+.|+++++||.|+||.+|.|..-.+|..||||+-+.. ....++..|.++.+.++| ..|..+..| ..+..+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y-----~~e~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHY-----GTEKDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhh-----cccccc
Confidence 357899999999999999999999999999999997533 333678889999999975 555555555 345667
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC---CCeEEcc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSD 856 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~~kl~D 856 (1003)
-.+|||.. |.+|.+...-+ ...++..+++..|-|++.-++|+|.+ +++||||||+|+|..-+ ..+.++|
T Consensus 86 nvlVMdLL-GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred ceeeeecc-CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence 79999998 66999999876 45789999999999999999999999 99999999999999744 4689999
Q ss_pred cccccccccCCccc--cCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCC
Q 001858 857 FGLAKFLFDRPIQE--TSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFND 924 (1003)
Q Consensus 857 fG~a~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~ 924 (1003)
||+|+.+.+..... .........||.+|++-.+..+...+.+.|+-|+|.++.+.-.|..||++....
T Consensus 158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 99998876543221 222334567999999999999999999999999999999999999999987543
No 424
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.88 E-value=1e-24 Score=225.41 Aligned_cols=326 Identities=19% Similarity=0.189 Sum_probs=229.7
Q ss_pred eccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeec
Q 001858 275 IVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGL 354 (1003)
Q Consensus 275 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L 354 (1003)
+.++-.++ .+|..+- ..-+.++|..|+|+.+++.+|+.+++|++|+|++|+|+.+..+ +|..+++|.+|-+
T Consensus 52 dCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~------AF~GL~~l~~Lvl 122 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPD------AFKGLASLLSLVL 122 (498)
T ss_pred EccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChH------hhhhhHhhhHHHh
Confidence 33444444 4555442 4567788899999988888899999999999999888876544 4556667666555
Q ss_pred cC-cCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCccccccccceeccccccccc
Q 001858 355 NS-NRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHG 433 (1003)
Q Consensus 355 ~~-N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 433 (1003)
-+ |+|+......|+++..|+.|.+.-|++.-...+.|..+++|..|.+.+|.+..+--.+|..+.+++.+.+..|.+-.
T Consensus 123 yg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic 202 (498)
T KOG4237|consen 123 YGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC 202 (498)
T ss_pred hcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc
Confidence 55 88887667778888888888888888887777888888888888888888874333477778888888887777431
Q ss_pred cccccccCCCccceeecccccccccCCccccCCCCCCeeeccCccccCCCchhhhhhc--cccccccCCCCccccccccc
Q 001858 434 IIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEIT--TLSSLLDLSSNLISGSIPLV 511 (1003)
Q Consensus 434 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~--~l~~~l~L~~N~l~~~~p~~ 511 (1003)
.++++.+... +. ..|..++...-..-..+.++++. .+++.-+... ++.+.+....+....-....
T Consensus 203 -----dCnL~wla~~-~a------~~~ietsgarc~~p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~c 269 (498)
T KOG4237|consen 203 -----DCNLPWLADD-LA------MNPIETSGARCVSPYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKC 269 (498)
T ss_pred -----ccccchhhhH-Hh------hchhhcccceecchHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHH
Confidence 1223322221 11 22333444444555556666665 3333322221 22222222333333333456
Q ss_pred cccccccccccccccccccccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCCcccccCCCccc
Q 001858 512 VGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLE 591 (1003)
Q Consensus 512 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 591 (1003)
|..+++|+.|+|++|++++.-+.+|.++..+++|+|..|+|...-...|.++..|+.|+|++|+|+...|.+|..+.+|.
T Consensus 270 f~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~ 349 (498)
T KOG4237|consen 270 FKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLS 349 (498)
T ss_pred HhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceee
Confidence 89999999999999999988889999999999999999999876677889999999999999999999999999999999
Q ss_pred eEecCCCcccccCCCCCccCCCcceeeccCC
Q 001858 592 YLNLSYNDFEGQVPTKGVFSNKTRISLIENG 622 (1003)
Q Consensus 592 ~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 622 (1003)
+|+|-.|+|.|.+-....-..++.-+..|||
T Consensus 350 ~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~ 380 (498)
T KOG4237|consen 350 TLNLLSNPFNCNCRLAWLGEWLRKKSVVGNP 380 (498)
T ss_pred eeehccCcccCccchHHHHHHHhhCCCCCCC
Confidence 9999999999877653322333333345554
No 425
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=3.3e-22 Score=219.34 Aligned_cols=170 Identities=22% Similarity=0.183 Sum_probs=131.0
Q ss_pred HHhccCCccCeeeeccceEEEEEEECC-CCceEEEEEeccc-----cccchHHHHHHHHHHHhcCCCCcee-Eeeeeeec
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGE-DLLPVAVKVINLK-----QKGSIKSFVAECEALKNIRHRNLIK-IITVCSSI 772 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~ 772 (1003)
...++|++.+.||+|+||+||+|.+.. +++.||||++... .....+.|.+|++++++++|+|+++ ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 345789999999999999999999876 6777899987532 1223567999999999999999985 4332
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccC-CCCceEeCCCCC
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDL-KPSNVLLDHDMV 851 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di-kp~Nill~~~~~ 851 (1003)
+..++||||++|++|... .. .+ ...++.++++|++|||+. ||+|||| ||+||+++.++.
T Consensus 91 -----~~~~LVmE~~~G~~L~~~-~~-----~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 -----GKDGLVRGWTEGVPLHLA-RP-----HG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred -----CCcEEEEEccCCCCHHHh-Cc-----cc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCC
Confidence 235999999999999632 11 11 146788999999999999 9999999 999999999999
Q ss_pred eEEcccccccccccCCcccc---CcccccccccccccCccccCCC
Q 001858 852 AHVSDFGLAKFLFDRPIQET---SSSSIGIKGTVGYVAPEYGMGG 893 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~ 893 (1003)
+||+|||+|+.+........ ...-....+++.|+|||++...
T Consensus 151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999999987754321111 0111356688999999987654
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=6.7e-22 Score=235.63 Aligned_cols=262 Identities=19% Similarity=0.338 Sum_probs=200.6
Q ss_pred CCceeeEEeCCCCCcEEEEEeecCCCCcccCccccCCCCCcEEEcCCCCCCCCCchhhcccccCcEEEecccccccccCc
Q 001858 63 VCQWTGVTCGQRHPRVIQLYLRNQSVGGFLSPYVGNLSFLRFINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPS 142 (1003)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~~~~~g~~~~~l~~l~~L~~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~ 142 (1003)
-+.|+-..|-. ..++.|++.+.+++. +|..+. ++|+.|+|++|+++ .+|..+. .+|++|+|++|+|+ .+|.
T Consensus 167 ~a~~r~~~Cl~--~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~ 237 (754)
T PRK15370 167 EAVQRMRDCLK--NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPA 237 (754)
T ss_pred HHHHHHHhhcc--cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCCh
Confidence 34566566754 367889999998884 676664 58999999999999 7898775 59999999999999 7888
Q ss_pred cCcCCCCCceeecccccccCCCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCC
Q 001858 143 NLSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRD 222 (1003)
Q Consensus 143 ~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 222 (1003)
.+. .+|+.|+|++|+++ .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|+|+ .+|..+. .+
T Consensus 238 ~l~--~~L~~L~Ls~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~s 305 (754)
T PRK15370 238 TLP--DTIQEMELSINRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SG 305 (754)
T ss_pred hhh--ccccEEECcCCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hh
Confidence 765 48999999999998 8898764 58999999999999 6888775 58999999999999 4676554 47
Q ss_pred CCeEecCCccCCCCCCCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccC
Q 001858 223 LNFLSVAENNFSGMLPPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSG 302 (1003)
Q Consensus 223 L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 302 (1003)
|+.|++++|+++..++.+. ++|+.|++++|.++ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++
T Consensus 306 L~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~ 376 (754)
T PRK15370 306 ITHLNVQSNSLTALPETLP--PGLKTLEAGENALT-SLPASLP---PELQVLDVSKNQIT-VLPETLP--PTITTLDVSR 376 (754)
T ss_pred HHHHHhcCCccccCCcccc--ccceeccccCCccc-cCChhhc---CcccEEECCCCCCC-cCChhhc--CCcCEEECCC
Confidence 9999999999997655443 68999999999998 5887664 79999999999998 5676553 5788888888
Q ss_pred ccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCC
Q 001858 303 NHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFG 360 (1003)
Q Consensus 303 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 360 (1003)
|+|+..++. +. ..|+.|++++|+|..++.. ++..+..++++..|++.+|.+.
T Consensus 377 N~Lt~LP~~-l~--~sL~~LdLs~N~L~~LP~s---l~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 377 NALTNLPEN-LP--AALQIMQASRNNLVRLPES---LPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CcCCCCCHh-HH--HHHHHHhhccCCcccCchh---HHHHhhcCCCccEEEeeCCCcc
Confidence 888754332 21 2566777777776654321 1222333455555666555554
No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.85 E-value=2.1e-22 Score=197.83 Aligned_cols=249 Identities=22% Similarity=0.312 Sum_probs=189.0
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccc--ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEE
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
..+..+|.+...|+.|+|+++++ .+++|++...+ ....++|..|.-.++.+.||||..+++.|.. +....+
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-----ppnlv~ 264 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-----PPNLVI 264 (448)
T ss_pred hhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-----CCCceE
Confidence 34556789999999999999865 57778876443 2234689999999999999999999999854 355689
Q ss_pred eeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEc--ccccc
Q 001858 783 VYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS--DFGLA 860 (1003)
Q Consensus 783 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~--DfG~a 860 (1003)
+..||+.|+|+..++... .-.++..|+.+++.++++|++|||+.. |-|.---+.++.+++|++.+++|+ |--++
T Consensus 265 isq~mp~gslynvlhe~t---~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfs 340 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHEQT---SVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFS 340 (448)
T ss_pred eeeeccchHHHHHHhcCc---cEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceee
Confidence 999999999999998865 446788899999999999999999983 334445688999999999988774 43322
Q ss_pred cccccCCccccCcccccccccccccCccccCCCCCC---ccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCc
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVS---LTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALP 937 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1003)
. ...+..-.+.||+||.++.++.+ .++|+|||++++||+.|...||.+..+-+...
T Consensus 341 f------------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm--------- 399 (448)
T KOG0195|consen 341 F------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM--------- 399 (448)
T ss_pred e------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh---------
Confidence 1 11123346889999998877654 46899999999999999999998764422211
Q ss_pred hhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 938 EKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 938 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
+-.+.. -|...++.....+.+++.-|+..||.+||.+..|+--|++..
T Consensus 400 -------kialeg---lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 400 -------KIALEG---LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -------hhhhcc---ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 111111 112222345667889999999999999999999998887653
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=2.5e-21 Score=226.78 Aligned_cols=257 Identities=20% Similarity=0.225 Sum_probs=190.1
Q ss_pred CccCeeeeccceEEEEEEECCCCceEEEEEeccc--ccc----chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 706 SLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QKG----SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 706 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
...+++|.|++|.|+.+.........+.|..... ... ....+..|+.+-..++|||++..+..+.. ...
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~-----~~~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQE-----IDG 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhh-----ccc
Confidence 3457899999998888887666555566544311 111 12236667778888999999887766432 222
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
..-+|||+++ +|..++.. .+.+...++..++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~-----~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~ 466 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMS-----NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGA 466 (601)
T ss_pred chhhhhcccH-HHHHHHhc-----ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCc
Confidence 3344999999 99999986 34688889999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCccccCcccccccccccccCccccCCCCCCcc-ccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCch
Q 001858 860 AKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLT-GDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPE 938 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1003)
+..+.-. ...........+|+..|+|||+..+..|++. .||||.|+++..|.+|+.||......+..+...
T Consensus 467 ~~vf~~~-~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~------- 538 (601)
T KOG0590|consen 467 ASVFRYP-WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN------- 538 (601)
T ss_pred ceeeccC-cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh-------
Confidence 9765332 2222244556789999999999999999875 899999999999999999997655443332000
Q ss_pred hHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 001858 939 KVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 939 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~ 989 (1003)
..................++.....++.++++++|.+|.++++|++
T Consensus 539 -----~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 539 -----NYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -----ccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0000001111123334455677788899999999999999999986
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=2.8e-19 Score=200.63 Aligned_cols=263 Identities=30% Similarity=0.444 Sum_probs=195.4
Q ss_pred CCccCeeeeccceEEEEEEECCCCceEEEEEecccccc---chHHHHHHHHHHHhcCCC-CceeEeeeeeecccCCCCce
Q 001858 705 FSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG---SIKSFVAECEALKNIRHR-NLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 705 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 780 (1003)
|.+.+.+|.|+||.||++.+. ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+++ ......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCCEE
Confidence 677889999999999999997 67999998754433 367899999999999988 799999985 334447
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC-CeEEccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGL 859 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~DfG~ 859 (1003)
+++++++.++++.+++...... ..+.......+..|++.+++|+|+. +++|||+||+||+++..+ .++++|||.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 9999999999999877763211 3688999999999999999999999 999999999999999988 799999999
Q ss_pred ccccccCCccccC-cccccccccccccCccccCC---CCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhh
Q 001858 860 AKFLFDRPIQETS-SSSIGIKGTVGYVAPEYGMG---GNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMA 935 (1003)
Q Consensus 860 a~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~ 935 (1003)
++........... .......|+..|+|||...+ ..+....|+||+|++++++++|..||...... .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----------~ 218 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----------S 218 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----------c
Confidence 9855432211111 12345679999999999887 57888999999999999999999996654321 0
Q ss_pred CchhHHHHHHhhccc--CCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 001858 936 LPEKVMEIVDFALLL--DPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKN 990 (1003)
Q Consensus 936 ~~~~~~~~i~~~l~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 990 (1003)
......+.+...... .+.............+.+++..|+..+|..|.++.+....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 219 ATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 001111111111111 0000000001223456778888888899999998887765
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=1.3e-19 Score=184.21 Aligned_cols=176 Identities=15% Similarity=0.184 Sum_probs=134.0
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchH---H------HHHHHHHHHhcCCCCceeEeeeeee
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIK---S------FVAECEALKNIRHRNLIKIITVCSS 771 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~h~niv~~~~~~~~ 771 (1003)
..++|+..+++|.|+||.||++.. ++..+|+|+++.......+ . +.+|++.+.++.||+|..+.+++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 468999999999999999999766 3568999999754433322 2 6899999999999999999887543
Q ss_pred ccc---CCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC
Q 001858 772 IDF---KGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH 848 (1003)
Q Consensus 772 ~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~ 848 (1003)
... .-....++||||++|.+|.++.. +++ ....+++.+++.+|+. |++|||++|+||+++.
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSK 170 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeC
Confidence 221 12346799999999999988732 222 2456999999999999 9999999999999999
Q ss_pred CCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHH
Q 001858 849 DMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMF 912 (1003)
Q Consensus 849 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell 912 (1003)
+| ++++|||......... . ...+.....+..++|+|++|+++....
T Consensus 171 ~g-i~liDfg~~~~~~e~~-----a------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRK-----A------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchh-----h------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 88 9999999886442110 0 011334455667899999999987654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=2.5e-19 Score=181.04 Aligned_cols=139 Identities=17% Similarity=0.137 Sum_probs=108.4
Q ss_pred cCeeeeccceEEEEEEECCCCceEEEEEecccccc--c-------hHH-----------------HHHHHHHHHhcCCCC
Q 001858 708 SNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG--S-------IKS-----------------FVAECEALKNIRHRN 761 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~n 761 (1003)
...||+|+||.||+|.+. +|+.||||+++..... . ... ..+|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 8999999999743211 0 112 234999999998877
Q ss_pred ceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCcEeccCC
Q 001858 762 LIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYL-HHHCQPPIVHGDLK 840 (1003)
Q Consensus 762 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dik 840 (1003)
+.....+. . ...++||||++++++...... .+.+++.++..++.|++.+++|+ |+. +|+|||||
T Consensus 81 v~~p~~~~----~---~~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlk 145 (190)
T cd05147 81 IPCPEPIL----L---KSHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLS 145 (190)
T ss_pred CCCCcEEE----e---cCCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 64433321 1 122799999999877655332 34688899999999999999999 688 99999999
Q ss_pred CCceEeCCCCCeEEccccccccc
Q 001858 841 PSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 841 p~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
|+||+++ ++.++++|||+|...
T Consensus 146 P~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 146 EYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHEEEE-CCcEEEEEccccccC
Confidence 9999998 578999999999753
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=1.1e-19 Score=190.37 Aligned_cols=241 Identities=21% Similarity=0.259 Sum_probs=149.6
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccc---ccchHHHHHHHHHHHhcC----------CCCceeEeeee
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ---KGSIKSFVAECEALKNIR----------HRNLIKIITVC 769 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~----------h~niv~~~~~~ 769 (1003)
..+...+.||.|+++.||.+++.++++++|+|++.... ....+.+.+|.-....+. |-.++..++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 45566789999999999999999999999999986443 233566777765544432 22333333332
Q ss_pred eecc-------cCCCC-----ceEEeeecccCCCHHHHHhh---cCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 001858 770 SSID-------FKGDD-----FKALVYDYMQSGSLEDWLQQ---SNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPI 834 (1003)
Q Consensus 770 ~~~~-------~~~~~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 834 (1003)
.... -.+.. ..+++|+-+.+ +|.+++.. .... ........+..+..|+++.+++||+. |+
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~~---Gl 166 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHSY---GL 166 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred EEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhhc---ce
Confidence 2110 00011 23567887754 88887653 2211 22344555566779999999999999 99
Q ss_pred EeccCCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCC--------CCCCccccchhHHH
Q 001858 835 VHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMG--------GNVSLTGDVYSFGI 906 (1003)
Q Consensus 835 vH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~ 906 (1003)
+|+||+|+|++++.+|.++++||+......... .....+..|.|||.... -.++.+.|.|++|+
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~--------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY--------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTEEE--------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCcee--------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 999999999999999999999998886543211 11234578999997533 24688899999999
Q ss_pred HHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCC
Q 001858 907 LLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSER 981 (1003)
Q Consensus 907 il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R 981 (1003)
++|.|+||+.||............ + ... .+.++.+..++...++++|++|
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~~~-----------------f-~~C-------~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPEWD-----------------F-SRC-------RDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSGGG-----------------G-TTS-------S---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHccCCCCCCCcccccccc-----------------c-hhc-------CCcCHHHHHHHHHHccCCcccC
Confidence 999999999999865332111100 0 000 0335567777788888888877
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=2.9e-18 Score=174.33 Aligned_cols=139 Identities=21% Similarity=0.171 Sum_probs=109.9
Q ss_pred cCeeeeccceEEEEEEECCCCceEEEEEeccccccc--------------------------hHHHHHHHHHHHhcCCCC
Q 001858 708 SNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS--------------------------IKSFVAECEALKNIRHRN 761 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 761 (1003)
...||+|++|.||+|.+. +|+.||||+++...... ...+..|++.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999987 89999999987542110 123467899999999998
Q ss_pred ceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccCC
Q 001858 762 LIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDLK 840 (1003)
Q Consensus 762 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dik 840 (1003)
+.....+.. . ..++||||++++++...... ...++..+...++.|++.++.++|+ . ||+|||||
T Consensus 81 i~~p~~~~~-----~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlk 145 (190)
T cd05145 81 VPVPEPILL-----K--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLS 145 (190)
T ss_pred CCCceEEEe-----c--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCC
Confidence 754444321 1 23899999998865443222 2356788899999999999999999 8 99999999
Q ss_pred CCceEeCCCCCeEEccccccccc
Q 001858 841 PSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 841 p~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
|+||+++ ++.++++|||++...
T Consensus 146 P~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 146 EYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred hhhEEEE-CCCEEEEEcccceec
Confidence 9999998 899999999999765
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=9.6e-21 Score=173.93 Aligned_cols=166 Identities=31% Similarity=0.500 Sum_probs=119.1
Q ss_pred ccCCCCccEEEcccccccccCCCccccccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCC
Q 001858 391 IRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLM 470 (1003)
Q Consensus 391 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 470 (1003)
+.++.+.+.|.|++|+++ .+|..+..+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345566666777777776 56666677777777777777776 56666777777777777777776 6677777777777
Q ss_pred eeeccCccccCCCchhhhhhccccccccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCC
Q 001858 471 LLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDN 550 (1003)
Q Consensus 471 ~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 550 (1003)
.|||++|++.. ..+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+..|
T Consensus 106 vldltynnl~e------------------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 106 VLDLTYNNLNE------------------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred hhhcccccccc------------------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccC
Confidence 77777766651 134555667777888888888886 77888888888888888888
Q ss_pred CccccCCcccccccCcCeeeccCceeccCCcccccC
Q 001858 551 SFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLED 586 (1003)
Q Consensus 551 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 586 (1003)
.+- .+|.+++.++.|++|.+.+|+++ .+|+.+++
T Consensus 161 dll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 161 DLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred chh-hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 887 67888888888888888888887 45544444
No 435
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=1.9e-20 Score=208.58 Aligned_cols=286 Identities=22% Similarity=0.280 Sum_probs=152.8
Q ss_pred eeeccCcccc-cCcCccccccccchhhhccCccccCc----cCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCC
Q 001858 273 ILIVGQNNLT-GSIPQSFSNASNLVILNLSGNHFSGK----VGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCS 347 (1003)
Q Consensus 273 ~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 347 (1003)
.|+|..+.++ ......+..+.+|++|+++++.++.. ++..+...++|++|+++++.+...+.+.......+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4566666666 33344455566677777777766432 222344455566666666555421111111223344455
Q ss_pred CCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccc----cCCCccccc-cccc
Q 001858 348 KLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTG----TIPYTIGEL-INLQ 422 (1003)
Q Consensus 348 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l-~~L~ 422 (1003)
+|+.|++++|.+.+..+..+..+.+ . ++|++|++++|++++ .+...+..+ ++|+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~--------------------~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~ 140 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLR--------------------S-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALE 140 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhc--------------------c-CcccEEEeeCCccchHHHHHHHHHHHhCCCCce
Confidence 5555555555554333333333222 1 225555555555542 122223334 5556
Q ss_pred eecccccccccc----ccccccCCCccceeecccccccc----cCCccccCCCCCCeeeccCccccCCCchhhhhhcccc
Q 001858 423 ALDFSANNLHGI----IPDSIGNLSTLNSLWLGFNNLQG----NIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLS 494 (1003)
Q Consensus 423 ~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~ 494 (1003)
.|++++|.+++. ++..+..+++|++|++++|.+++ .++..+..+++|+.|++++|.+++.-..
T Consensus 141 ~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~--------- 211 (319)
T cd00116 141 KLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS--------- 211 (319)
T ss_pred EEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH---------
Confidence 666666665522 22334455566666666666653 2233344556677777777766521111
Q ss_pred ccccCCCCccccccccccccccccccccccccccccccCcccc-----CcccccEEEecCCCccc----cCCcccccccC
Q 001858 495 SLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLS-----SCTSLEYLKMQDNSFRG----SIPSSLISLKS 565 (1003)
Q Consensus 495 ~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~----~~p~~~~~l~~ 565 (1003)
.++..+..+++|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..+++
T Consensus 212 ------------~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~ 279 (319)
T cd00116 212 ------------ALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKES 279 (319)
T ss_pred ------------HHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCC
Confidence 1122245566777788877777653222222 23678888888888762 23445556677
Q ss_pred cCeeeccCceeccC----CcccccCC-CccceEecCCCcc
Q 001858 566 IEVLDLSCNNLSGQ----IPEYLEDL-SFLEYLNLSYNDF 600 (1003)
Q Consensus 566 L~~L~Ls~N~l~~~----~p~~l~~l-~~L~~L~l~~N~l 600 (1003)
|+.+|+++|.++.. ....+... +.|+.+++.+|+|
T Consensus 280 L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 280 LLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred ccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 88888888888744 44455555 6788888888764
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=2.6e-20 Score=171.08 Aligned_cols=180 Identities=28% Similarity=0.445 Sum_probs=157.6
Q ss_pred cccccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCCeeeccCccccCCCchhhhhhcccc
Q 001858 415 IGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLS 494 (1003)
Q Consensus 415 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~ 494 (1003)
+.++.+++.|.||+|+++ .+|..++.+.+|+.|++++|+|. .+|..++.+++|+.|+++-|++. .
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~------------ 93 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-I------------ 93 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-c------------
Confidence 446778899999999998 77888999999999999999999 88999999999999999999987 3
Q ss_pred ccccCCCCcccccccccccccccccccccccccccc-ccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccC
Q 001858 495 SLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSG-EIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSC 573 (1003)
Q Consensus 495 ~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 573 (1003)
.|..|+.++.|+.|||.+|++.. .+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+.+
T Consensus 94 -------------lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrd 159 (264)
T KOG0617|consen 94 -------------LPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRD 159 (264)
T ss_pred -------------CccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeecc
Confidence 45558888999999999999964 48999999999999999999998 8899999999999999999
Q ss_pred ceeccCCcccccCCCccceEecCCCcccccCCCCCccC---CCcceeeccCCCc
Q 001858 574 NNLSGQIPEYLEDLSFLEYLNLSYNDFEGQVPTKGVFS---NKTRISLIENGKL 624 (1003)
Q Consensus 574 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~---~~~~~~~~~n~~~ 624 (1003)
|.+- ..|..++.++.|+.|.+.+|+++-.+|..+.+. +........|||.
T Consensus 160 ndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 160 NDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred Cchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 9998 689999999999999999999998888766554 3344567889985
No 437
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=7.2e-20 Score=203.91 Aligned_cols=286 Identities=23% Similarity=0.306 Sum_probs=179.0
Q ss_pred HHhhcccccCCCCCcccccCccccceeeccCcccccC----cCccccccccchhhhccCccccC------ccCcccCCCC
Q 001858 248 QISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGS----IPQSFSNASNLVILNLSGNHFSG------KVGIDFSSLP 317 (1003)
Q Consensus 248 ~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~------~~~~~~~~l~ 317 (1003)
+|+|..+.+++.--..++..++.|++|++++|.+++. ++..+...++|++|++++|.+.+ ..+..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4778888887443344445778899999999999643 56667788889999999998873 2334567789
Q ss_pred cccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCC-CC
Q 001858 318 NITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNL-AN 396 (1003)
Q Consensus 318 ~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~ 396 (1003)
+|++|++++|.+...... .+...... ++|++|++++|++++..... +...+..+ ++
T Consensus 82 ~L~~L~l~~~~~~~~~~~--~~~~l~~~-~~L~~L~ls~~~~~~~~~~~--------------------l~~~l~~~~~~ 138 (319)
T cd00116 82 GLQELDLSDNALGPDGCG--VLESLLRS-SSLQELKLNNNGLGDRGLRL--------------------LAKGLKDLPPA 138 (319)
T ss_pred ceeEEEccCCCCChhHHH--HHHHHhcc-CcccEEEeeCCccchHHHHH--------------------HHHHHHhCCCC
Confidence 999999999998752211 11122222 55999999999887421111 11122233 45
Q ss_pred ccEEEcccccccc----cCCCccccccccceecccccccccc----ccccccCCCccceeeccccccccc----CCcccc
Q 001858 397 IYALGLEYNQLTG----TIPYTIGELINLQALDFSANNLHGI----IPDSIGNLSTLNSLWLGFNNLQGN----IPSSLG 464 (1003)
Q Consensus 397 L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~ 464 (1003)
|++|++++|.+++ .++..+..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+.
T Consensus 139 L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~ 218 (319)
T cd00116 139 LEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLA 218 (319)
T ss_pred ceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhc
Confidence 5555555555542 1223344455666666666666532 223344456777777777776532 334566
Q ss_pred CCCCCCeeeccCccccCCCchhhhhhccccccccCCCCcccccccccccccccccccccccccccc----ccCccccCcc
Q 001858 465 NCKNLMLLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSG----EIPTTLSSCT 540 (1003)
Q Consensus 465 ~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~ 540 (1003)
.+++|++|++++|++++.....+... . ....+.|+.|++++|.++. .++..+..++
T Consensus 219 ~~~~L~~L~ls~n~l~~~~~~~l~~~-----------------~---~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~ 278 (319)
T cd00116 219 SLKSLEVLNLGDNNLTDAGAAALASA-----------------L---LSPNISLLTLSLSCNDITDDGAKDLAEVLAEKE 278 (319)
T ss_pred ccCCCCEEecCCCcCchHHHHHHHHH-----------------H---hccCCCceEEEccCCCCCcHHHHHHHHHHhcCC
Confidence 77888888888888773211111110 0 1124578888888888762 2344566667
Q ss_pred cccEEEecCCCcccc----CCcccccc-cCcCeeeccCcee
Q 001858 541 SLEYLKMQDNSFRGS----IPSSLISL-KSIEVLDLSCNNL 576 (1003)
Q Consensus 541 ~L~~L~L~~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l 576 (1003)
+|+++++++|.++.. +...+... +.|+.|++.+|++
T Consensus 279 ~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 279 SLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 888888888888744 34444444 6788888888764
No 438
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.75 E-value=4.5e-19 Score=205.13 Aligned_cols=249 Identities=22% Similarity=0.272 Sum_probs=174.9
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-ccchHHHH---HHHHHHHhcCCCCceeEeeeeeecccCCCCc
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-KGSIKSFV---AECEALKNIRHRNLIKIITVCSSIDFKGDDF 779 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 779 (1003)
+|...+.+|.+.|=.|.+|++.+ | .|+||++-+.+ ....+.|. .|++ ...++|||++++.-+ ...+..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~-----~~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKV-----LVTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHH-----HHhhHH
Confidence 67778899999999999999973 4 48999986544 22333444 4444 555689999998766 445666
Q ss_pred eEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccc
Q 001858 780 KALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 780 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~ 859 (1003)
-|+|-+|+.+ +|+|.+.. ++.+...+.+.|+.|++.|+..+|+. ||+|||||.+|||++.=.-+.|+||..
T Consensus 96 AylvRqyvkh-nLyDRlST-----RPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 96 AYLVRQYVKH-NLYDRLST-----RPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHHHhh-hhhhhhcc-----chHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccc
Confidence 7899999977 99999987 56788888999999999999999999 999999999999999999999999965
Q ss_pred ccccccCCccccCcccccc----cccccccCccccCCC----------C-CCccccchhHHHHHHHHHh-CCCCCCcccC
Q 001858 860 AKFLFDRPIQETSSSSIGI----KGTVGYVAPEYGMGG----------N-VSLTGDVYSFGILLLEMFT-GRRPTHTMFN 923 (1003)
Q Consensus 860 a~~~~~~~~~~~~~~~~~~----~gt~~y~aPE~~~~~----------~-~~~~sDvwslG~il~ell~-g~~P~~~~~~ 923 (1003)
-+...-.. +.......+ ..-..|.|||.+... . .+++-||||+||+++|+++ |++||.-.
T Consensus 167 FKPtYLPe--DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-- 242 (1431)
T KOG1240|consen 167 FKPTYLPE--DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-- 242 (1431)
T ss_pred cCCccCCC--CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH--
Confidence 43221000 000111111 122469999976441 1 4677899999999999999 78888531
Q ss_pred CcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 924 DGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
++..|.... ........+. ++ ...+..++..|++.||++|.++++.++.-
T Consensus 243 ---QL~aYr~~~-~~~~e~~Le~------------Ie--d~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 243 ---QLLAYRSGN-ADDPEQLLEK------------IE--DVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred ---HHHhHhccC-ccCHHHHHHh------------Cc--CccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 111111100 0111111111 11 12467788889999999999999998863
No 439
>PLN03150 hypothetical protein; Provisional
Probab=99.75 E-value=3.2e-18 Score=204.19 Aligned_cols=152 Identities=32% Similarity=0.544 Sum_probs=131.0
Q ss_pred CCHhHHHHHHHHHHhcCCCCCCCCCCCCCCCCC----ceeeEEeCC--CC--CcEEEEEeecCCCCcccCccccCCCCCc
Q 001858 32 SNETDRVALLAIKSQLQDPMGITSSWNNSINVC----QWTGVTCGQ--RH--PRVIQLYLRNQSVGGFLSPYVGNLSFLR 103 (1003)
Q Consensus 32 ~~~~~~~al~~~k~~~~d~~~~~~sW~~~~~~c----~w~gv~c~~--~~--~~v~~l~l~~~~~~g~~~~~l~~l~~L~ 103 (1003)
+.+.|.+||++||+++.+|.. .+|+++ .|| .|.||.|+. .. .+|+.|+|+++++.|.+|+.+++|++|+
T Consensus 369 t~~~~~~aL~~~k~~~~~~~~--~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~ 445 (623)
T PLN03150 369 TLLEEVSALQTLKSSLGLPLR--FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQ 445 (623)
T ss_pred cCchHHHHHHHHHHhcCCccc--CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCC
Confidence 457899999999999987653 589763 332 799999953 22 3699999999999999999999999999
Q ss_pred EEEcCCCCCCCCCchhhcccccCcEEEecccccccccCccCcCCCCCceeecccccccCCCCccccccccccceEEccCc
Q 001858 104 FINLASNNLHGEIPNELGRLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLNVAEN 183 (1003)
Q Consensus 104 ~L~L~~n~~~g~ip~~l~~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~L~~n 183 (1003)
.|+|++|+++|.+|..++.+++|++|+|++|+++|.+|+.++++++|++|+|++|+++|.+|..++....++..+++++|
T Consensus 446 ~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 446 SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525 (623)
T ss_pred EEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888765456667777766
Q ss_pred ccc
Q 001858 184 QLT 186 (1003)
Q Consensus 184 ~l~ 186 (1003)
...
T Consensus 526 ~~l 528 (623)
T PLN03150 526 AGL 528 (623)
T ss_pred ccc
Confidence 543
No 440
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=7.7e-18 Score=167.07 Aligned_cols=189 Identities=15% Similarity=0.066 Sum_probs=136.0
Q ss_pred CccCeeeeccceEEEEEEECCCCceEEEEEecccccc----chHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCce
Q 001858 706 SLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG----SIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 706 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.+...|+.|+||+||.+.. .+.+++.+.+.....- ....+.+|+++++++. |+++.+++++. ..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CE
Confidence 3567899999999997766 4567777766532221 1235889999999995 58899998761 24
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccC-CCCceEeCCCCCeEEccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDL-KPSNVLLDHDMVAHVSDFGL 859 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di-kp~Nill~~~~~~kl~DfG~ 859 (1003)
+++|||++|.+|.+.... + ...++.|++++++++|++ ||+|||| ||+||+++.++.++|+|||+
T Consensus 74 ~lvmeyI~G~~L~~~~~~------~------~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~ 138 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR------G------DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQL 138 (218)
T ss_pred EEEEeeecCccHHhhhhh------h------hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCC
Confidence 899999999998754321 1 134678999999999999 9999999 79999999999999999999
Q ss_pred ccccccCCcc----cc---Cc-ccccccccccccCccccCCC-CCC-ccccchhHHHHHHHHHhCCCCCCc
Q 001858 860 AKFLFDRPIQ----ET---SS-SSIGIKGTVGYVAPEYGMGG-NVS-LTGDVYSFGILLLEMFTGRRPTHT 920 (1003)
Q Consensus 860 a~~~~~~~~~----~~---~~-~~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwslG~il~ell~g~~P~~~ 920 (1003)
|........- .. .. .......++.|++|+...-- ..+ .+.+.++-|+-+|.++|++.|+..
T Consensus 139 A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 139 AVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred ceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 9854332210 00 00 00012256777777753221 233 567899999999999999988654
No 441
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=7.2e-18 Score=200.47 Aligned_cols=200 Identities=23% Similarity=0.287 Sum_probs=155.2
Q ss_pred HHhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCcee-EeeeeeecccCCCC
Q 001858 700 KATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIK-IITVCSSIDFKGDD 778 (1003)
Q Consensus 700 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~~~ 778 (1003)
.....|.|.+.+|+|+||.||+|...+ ++.||+|+-+.... -+|.--.+++.+++ +-+.. +..++..+-+ .+
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk-~~~~~~~~~~~~a~~~--~~ 767 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP---WEFYICLQVMERLK-PQMLPSIMHISSAHVF--QN 767 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc---eeeeehHHHHHhhc-hhhhcchHHHHHHHcc--CC
Confidence 345678899999999999999999986 99999999764332 22222334455555 22211 2222222222 34
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC-------CCC
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-------DMV 851 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~-------~~~ 851 (1003)
.-++|+||.+.|+|.+++.. .+..+|.-++.++.|++..+++||.. +||||||||+|+++.. ...
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~-----~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINT-----NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred cceeeeeccccccHHHhhcc-----CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccc
Confidence 44899999999999999984 56788999999999999999999999 9999999999999952 346
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCC
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRP 917 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P 917 (1003)
++|+|||.+..+.-- .........++|-.+-.+|...|..++..+|-|.++-+++.|+.|++-
T Consensus 840 l~lIDfG~siDm~lf---p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLF---PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eEEEecccceeeeEc---CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 899999999876432 222344567889999999999999999999999999999999999874
No 442
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=4.9e-17 Score=165.55 Aligned_cols=139 Identities=19% Similarity=0.252 Sum_probs=107.0
Q ss_pred CccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-----CCCCceeEeeeeeecccCCCCce
Q 001858 706 SLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-----RHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 706 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
.-.+.||+|+||.||. +..++.. +||++........+.+.+|+++++.+ .||||++++|++... .+.+..
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~--~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD--CGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--CCCeEE
Confidence 3457899999999995 6556554 69988765555567899999999999 579999999996441 122343
Q ss_pred E-Eeeec--ccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCcEeccCCCCceEeCC----CCCe
Q 001858 781 A-LVYDY--MQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAI-EYLHHHCQPPIVHGDLKPSNVLLDH----DMVA 852 (1003)
Q Consensus 781 ~-lv~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dikp~Nill~~----~~~~ 852 (1003)
+ +|+|| +.+++|.+++++. .+++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcE
Confidence 4 78999 5579999999752 24444 35577777777 999999 9999999999999974 3479
Q ss_pred EEcccccc
Q 001858 853 HVSDFGLA 860 (1003)
Q Consensus 853 kl~DfG~a 860 (1003)
+|+||+.+
T Consensus 149 ~LiDg~G~ 156 (210)
T PRK10345 149 VVCDNIGE 156 (210)
T ss_pred EEEECCCC
Confidence 99995544
No 443
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=2.5e-17 Score=170.87 Aligned_cols=203 Identities=22% Similarity=0.234 Sum_probs=138.2
Q ss_pred CCCCceeEeeeeeec----------------------ccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHH
Q 001858 758 RHRNLIKIITVCSSI----------------------DFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNI 815 (1003)
Q Consensus 758 ~h~niv~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 815 (1003)
+|||||++.+++... ...+....|+||..++. +|.+++... ..+.....-+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~------~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR------HRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC------CCchHHHHHH
Confidence 599999998876431 02235668999999976 999999863 4556677788
Q ss_pred HHHHHHHHHHHHhcCCCCcEeccCCCCceEeC--CCC--CeEEcccccccccccCCcc-ccCcccccccccccccCcccc
Q 001858 816 SIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD--HDM--VAHVSDFGLAKFLFDRPIQ-ETSSSSIGIKGTVGYVAPEYG 890 (1003)
Q Consensus 816 ~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~--~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~ 890 (1003)
+.|+++|+.|||.+ ||.|||+|++|||+. +|+ .+.++|||++---...... +..+.....-|...-||||+.
T Consensus 347 laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence 99999999999999 999999999999994 343 5788999998432221111 112222234477889999986
Q ss_pred CCCC-----C-CccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCchhhHHHHHH
Q 001858 891 MGGN-----V-SLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNERAKIEECLT 964 (1003)
Q Consensus 891 ~~~~-----~-~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 964 (1003)
...+ . -.|+|.|+.|.+.||+++..-||-....-..+...|-+. +-++..+.++.
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~-------------------qLPalp~~vpp 484 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES-------------------QLPALPSRVPP 484 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh-------------------hCCCCcccCCh
Confidence 5432 1 247999999999999999999986521111111111111 11222334455
Q ss_pred HHHHHHhhccccCCCCCCCHHHHHH
Q 001858 965 AVVRIGVLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 965 ~l~~l~~~cl~~~p~~RPs~~ev~~ 989 (1003)
.+.+++...++.+|++|+++.=...
T Consensus 485 ~~rqlV~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 485 VARQLVFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred HHHHHHHHHhcCCccccCCccHHHh
Confidence 6777788888888888887654433
No 444
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.72 E-value=2.8e-17 Score=183.18 Aligned_cols=217 Identities=26% Similarity=0.384 Sum_probs=162.5
Q ss_pred HHhcCCCCceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001858 754 LKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPP 833 (1003)
Q Consensus 754 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ 833 (1003)
++.+.|.|+.+++|.+.. +...+.|.+|+..|+|.|.+... .-.+++.....+.++++.|++|+|.. +
T Consensus 1 l~~l~h~n~~~f~g~~~~-----~~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh~s---~ 68 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD-----GPEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLHNS---P 68 (484)
T ss_pred CcccchhhhhhheeeEec-----CCceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHhcC---c
Confidence 356789999999999743 37779999999999999999874 45789999999999999999999998 5
Q ss_pred c-EeccCCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCC-------CCccccchhHH
Q 001858 834 I-VHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGN-------VSLTGDVYSFG 905 (1003)
Q Consensus 834 i-vH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDvwslG 905 (1003)
| .|+.+++.|+++|....+|++|||+.....+. ..........-..-|.|||.+.+.. .+.++||||+|
T Consensus 69 i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~---~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ 145 (484)
T KOG1023|consen 69 IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEET---AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFG 145 (484)
T ss_pred ceeeeeeccccceeeeeEEEEechhhhccccccc---ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHH
Confidence 5 89999999999999999999999999766431 1111111122456799999877641 46679999999
Q ss_pred HHHHHHHhCCCCCCcccCCcchhhHHHHhhCchhHHHHHHhhcccCCCCch--hhHHHHHHHHHHHHhhccccCCCCCCC
Q 001858 906 ILLLEMFTGRRPTHTMFNDGLTLHGFVKMALPEKVMEIVDFALLLDPGNER--AKIEECLTAVVRIGVLCSMESPSERIH 983 (1003)
Q Consensus 906 ~il~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~p~~RPs 983 (1003)
++++|+++.+.||+........ +++...+... ..+..++ ....+....+..++.+||..+|++||+
T Consensus 146 ii~~ei~~r~~~~~~~~~~~~~----------~eii~~~~~~--~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs 213 (484)
T KOG1023|consen 146 IIMYEILFRSGPFDLRNLVEDP----------DEIILRVKKG--GSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPS 213 (484)
T ss_pred HHHHHHHhccCccccccccCCh----------HHHHHHHHhc--CCCCcCcchhhhhhcchHHHHHHHHhcccChhhCcc
Confidence 9999999999999764322111 1111112221 1111121 112245567899999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 001858 984 MADAVKNLCAAREK 997 (1003)
Q Consensus 984 ~~ev~~~L~~~~~~ 997 (1003)
+++|-..++.+...
T Consensus 214 ~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 214 IEQIRSKLLTINKG 227 (484)
T ss_pred HHHHHhhhhhhccc
Confidence 99999988877664
No 445
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=3.2e-18 Score=189.69 Aligned_cols=187 Identities=28% Similarity=0.328 Sum_probs=154.9
Q ss_pred eeeeccceEEEEEEE---CCCCceEEEEEecccccc--chHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCCCceEEe
Q 001858 710 LIGQGSFGFVYRGNL---GEDLLPVAVKVINLKQKG--SIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGDDFKALV 783 (1003)
Q Consensus 710 ~lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 783 (1003)
.+|+|+||.|++++- ...+..+|+|+.+..... .......|..++..++ ||.++++... +..+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 368999999997543 345677999988643321 1225566888888886 9999998766 5667888999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 784 YDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 784 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
+++..+|.+...+.. ...+.+.....+...++-|++++|+. +|+|||+|++||+++.+|++++.|||.++..
T Consensus 76 ld~~rgg~lft~l~~-----~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSK-----EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEA 147 (612)
T ss_pred hhhcccchhhhcccc-----CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHh
Confidence 999999999988877 45677888888889999999999999 9999999999999999999999999999876
Q ss_pred ccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCc
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHT 920 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~ 920 (1003)
-+... .+||..|||||+.. ....++|.||+|++.+||++|..||..
T Consensus 148 v~~~~---------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 148 VKEKI---------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred Hhhhh---------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 43221 17999999999987 567789999999999999999999976
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.1e-16 Score=167.57 Aligned_cols=144 Identities=19% Similarity=0.143 Sum_probs=112.8
Q ss_pred hccCCccCeeeeccceEEEEEE-ECCCCceEEEEEecccccc------------------------chHHHHHHHHHHHh
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGN-LGEDLLPVAVKVINLKQKG------------------------SIKSFVAECEALKN 756 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~ 756 (1003)
..-|++.+.||+|+||.||+|. +..+++.||+|+++..... ....+..|++.+++
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3458899999999999999999 6668999999998743210 01235789999999
Q ss_pred cCCC--CceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-
Q 001858 757 IRHR--NLIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPP- 833 (1003)
Q Consensus 757 l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~- 833 (1003)
+.+. .+.+++++ ...++||||++++++...... .......++..++.|++.+++++|+. +
T Consensus 107 L~~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~---g~ 169 (237)
T smart00090 107 LYEAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLK-----DVEPEEEEEFELYDDILEEMRKLYKE---GE 169 (237)
T ss_pred HHhcCCCCCeeeEe---------cCceEEEEEecCCcccccccc-----cCCcchHHHHHHHHHHHHHHHHHHhc---CC
Confidence 9753 34444443 123799999999888765432 23455667789999999999999999 8
Q ss_pred cEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 834 IVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 834 ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
|+||||||+||+++ ++.++++|||.+...
T Consensus 170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 170 LVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 99999999999999 889999999998743
No 447
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=1.4e-16 Score=173.48 Aligned_cols=129 Identities=29% Similarity=0.488 Sum_probs=109.4
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 856 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D 856 (1003)
..+.++.|++++..+|.+++...+. ....++.....++.|++.|++| + +.+|+|+||.||+...+..+||.|
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhh
Confidence 3467899999999999999986443 3456778889999999999999 5 899999999999999999999999
Q ss_pred cccccccccCC-ccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHh
Q 001858 857 FGLAKFLFDRP-IQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFT 913 (1003)
Q Consensus 857 fG~a~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~ 913 (1003)
||+........ ............||..||+||.+.+..|+.++||||+|++++|++.
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 99998765432 1112334445679999999999999999999999999999999998
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.62 E-value=2.8e-15 Score=155.88 Aligned_cols=134 Identities=23% Similarity=0.349 Sum_probs=109.6
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccccc--------chHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCce
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG--------SIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFK 780 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 780 (1003)
+.||+|++|.||+|.+ .+..|++|+....... ....+.+|++++..++|+++.....++. +....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-----DPENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-----eCCCC
Confidence 5799999999999988 4567999986532211 1246788999999999998876665532 24456
Q ss_pred EEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 781 ALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 781 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
++||||++|++|.+++.... . ++..++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.+
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~--------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a 141 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG--------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLA 141 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc--------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcc
Confidence 89999999999999986521 1 7789999999999999999 999999999999999 889999999988
Q ss_pred cc
Q 001858 861 KF 862 (1003)
Q Consensus 861 ~~ 862 (1003)
..
T Consensus 142 ~~ 143 (211)
T PRK14879 142 EF 143 (211)
T ss_pred cC
Confidence 63
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.62 E-value=2.8e-15 Score=153.87 Aligned_cols=142 Identities=27% Similarity=0.220 Sum_probs=110.2
Q ss_pred HHHHhccCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc----------------------chHHHHHHHHHHH
Q 001858 698 LNKATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG----------------------SIKSFVAECEALK 755 (1003)
Q Consensus 698 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 755 (1003)
+......|.+.+.||+|+||.||+|... +++.||||+++..... ....+..|+.++.
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 3333445888999999999999999885 7899999987633210 0123677888999
Q ss_pred hcCCCC--ceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001858 756 NIRHRN--LIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPP 833 (1003)
Q Consensus 756 ~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ 833 (1003)
.+.|++ +.+.++. ...++||||+++++|.+.... .....++.+++.++.++|+. +
T Consensus 89 ~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~---g 145 (198)
T cd05144 89 ALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKH---G 145 (198)
T ss_pred HHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHC---C
Confidence 998774 4444432 234899999999998765421 23467889999999999998 9
Q ss_pred cEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 834 IVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 834 ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
|+||||||+||++++++.++++|||.+...
T Consensus 146 i~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 146 IIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 999999999999999999999999999654
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.60 E-value=3.1e-15 Score=177.15 Aligned_cols=138 Identities=25% Similarity=0.316 Sum_probs=109.2
Q ss_pred HhccCCccCeeeeccceEEEEEEECCCCceEEEEEeccc--cc------cchHHHHHHHHHHHhcCCCCceeEeeeeeec
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLK--QK------GSIKSFVAECEALKNIRHRNLIKIITVCSSI 772 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 772 (1003)
....|...+.||+|+||+||+|.+... .+++|+.... .. ...+++.+|+++++.++|++++....++.
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-- 406 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV-- 406 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE--
Confidence 344566789999999999999988644 3444432211 11 12356889999999999999988766642
Q ss_pred ccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCe
Q 001858 773 DFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 852 (1003)
Q Consensus 773 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~ 852 (1003)
.....++||||+++++|.+++. ....++.+++++++|||+. +++|||+||+||++ .++.+
T Consensus 407 ---~~~~~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~ 466 (535)
T PRK09605 407 ---DPEEKTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRL 466 (535)
T ss_pred ---eCCCCEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcE
Confidence 2345689999999999999885 2467899999999999999 99999999999999 67899
Q ss_pred EEcccccccc
Q 001858 853 HVSDFGLAKF 862 (1003)
Q Consensus 853 kl~DfG~a~~ 862 (1003)
+++|||+++.
T Consensus 467 ~liDFGla~~ 476 (535)
T PRK09605 467 YLIDFGLGKY 476 (535)
T ss_pred EEEeCccccc
Confidence 9999999964
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.58 E-value=2e-15 Score=175.58 Aligned_cols=172 Identities=29% Similarity=0.411 Sum_probs=126.4
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
..+|..++.|..|+||.||.++++.+.+++|+|+-+ +.- +++ ||..+.+. .+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~l-----------ilR-----nilt~a~n-----------pf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL-----------ILR-----NILTFAGN-----------PF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cch-----------hhh-----ccccccCC-----------cc
Confidence 467888999999999999999999999999995432 110 111 12222211 12
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
.| |+-.+.++.. ++++. +++.+++|+|+. +|+|||+||+|.+|+.-|++|++|||+++
T Consensus 134 vv------gDc~tllk~~-----g~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 134 VV------GDCATLLKNI-----GPLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred ee------chhhhhcccC-----CCCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhh
Confidence 33 4555555442 23332 237899999999 99999999999999999999999999997
Q ss_pred ccccCCc----------cccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccC
Q 001858 862 FLFDRPI----------QETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFN 923 (1003)
Q Consensus 862 ~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~ 923 (1003)
....... .........++||+.|.|||++.-..|+..+|.|++|+|+||.+.|+.||.+...
T Consensus 192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp 263 (1205)
T KOG0606|consen 192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 263 (1205)
T ss_pred hhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence 5421100 0111122346899999999999999999999999999999999999999987643
No 452
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.57 E-value=1e-14 Score=150.15 Aligned_cols=130 Identities=26% Similarity=0.391 Sum_probs=102.6
Q ss_pred eeeeccceEEEEEEECCCCceEEEEEeccccc--------cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceE
Q 001858 710 LIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK--------GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKA 781 (1003)
Q Consensus 710 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 781 (1003)
.||+|+||.||+|.+ ++..|++|+...... ....++.+|+++++.++|+++.....++. .....+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCE
Confidence 379999999999996 456899998653211 11356788999999998876554443321 234458
Q ss_pred EeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 782 LVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 782 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
+||||++|++|.+++.... . .++.+++.+++++|+. +++|||++|+||+++ ++.++++|||++.
T Consensus 74 lv~e~~~g~~l~~~~~~~~-----~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN-----D-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred EEEEEECCccHHHHHhhcH-----H-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 9999999999999876521 1 7889999999999999 999999999999999 8899999999886
Q ss_pred c
Q 001858 862 F 862 (1003)
Q Consensus 862 ~ 862 (1003)
.
T Consensus 138 ~ 138 (199)
T TIGR03724 138 Y 138 (199)
T ss_pred C
Confidence 4
No 453
>PLN03150 hypothetical protein; Provisional
Probab=99.53 E-value=1.8e-14 Score=172.26 Aligned_cols=152 Identities=33% Similarity=0.505 Sum_probs=116.5
Q ss_pred ccccccccccccccccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCCcccccCCCccceEecC
Q 001858 517 NLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYLNLS 596 (1003)
Q Consensus 517 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~ 596 (1003)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|||++|+++|.+|+.+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCC--CccCCCcceeeccCCCccCCCCCCCCCCCCCCCCCccccceeEeehhHHHHHHHHhhheeeEEEeec
Q 001858 597 YNDFEGQVPTK--GVFSNKTRISLIENGKLCGGLDELHLPACHNTRPRKAKITILKVLIPVIVLLTILSVGLIVVCTRRR 674 (1003)
Q Consensus 597 ~N~l~~~~p~~--~~~~~~~~~~~~~n~~~c~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~rrr 674 (1003)
+|+++|.+|.. ..+.....+.+.+|+++|+.+. .+.|.... ....++.++++++++++++++..+++++||+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~---l~~C~~~~---~~~~~i~~~~~~~~~~l~~~~~~~~~~~~r~ 572 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG---LRACGPHL---SVGAKIGIAFGVSVAFLFLVICAMCWWKRRQ 572 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC---CCCCcccC---CCceEEEEEhHHHHHHHHHHHHHhhheeehh
Confidence 99999999863 2233455778999999998653 35675322 2223444444444433333333333444443
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=1.2e-15 Score=165.77 Aligned_cols=190 Identities=30% Similarity=0.442 Sum_probs=108.6
Q ss_pred cEEEcccccccccCCCccccccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCCeeeccCc
Q 001858 398 YALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKN 477 (1003)
Q Consensus 398 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 477 (1003)
...||+.|++. ++|..+..+..|+.+.|+.|.+. .+|..++++..|.+|||+.|+++ ..|..++.|+ |+.|-+++|
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 34455555555 55555555555555556555555 45555555555666666666655 5555555554 555666666
Q ss_pred cccCCCchhhhhhccccccccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCCCccccCC
Q 001858 478 KLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIP 557 (1003)
Q Consensus 478 ~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 557 (1003)
+++ .+|+.+. +...+..+|.+.|++. .+|..++++.+|+.|.+..|++. .+|.++.. -.|..||++.|+++ .||
T Consensus 154 kl~-~lp~~ig-~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis-~iP 227 (722)
T KOG0532|consen 154 KLT-SLPEEIG-LLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS-YLP 227 (722)
T ss_pred ccc-cCCcccc-cchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-ecc
Confidence 665 4454443 2222222333444433 34444666677777777777776 56666663 34777777777776 677
Q ss_pred cccccccCcCeeeccCceeccCCcccccCCCc---cceEecCCC
Q 001858 558 SSLISLKSIEVLDLSCNNLSGQIPEYLEDLSF---LEYLNLSYN 598 (1003)
Q Consensus 558 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~---L~~L~l~~N 598 (1003)
-.|.+|+.|++|-|.+|.|. ..|..++..-+ .++|+..-.
T Consensus 228 v~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 228 VDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred hhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 77777777777777777776 45554443322 345554444
No 455
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.50 E-value=8.4e-14 Score=141.75 Aligned_cols=135 Identities=26% Similarity=0.285 Sum_probs=97.2
Q ss_pred cCeeeeccceEEEEEEECCCCceEEEEEeccccccc--hHH----------------------HHHHHHHHHhcCCC--C
Q 001858 708 SNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS--IKS----------------------FVAECEALKNIRHR--N 761 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~--n 761 (1003)
.+.||+|+||+||+|.+. +++.||||+++...... ... ...|.+.+.++.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999987 78899999986432111 111 13456666666443 2
Q ss_pred ceeEeeeeeecccCCCCceEEeeecccCCCHHH-HHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEeccC
Q 001858 762 LIKIITVCSSIDFKGDDFKALVYDYMQSGSLED-WLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHH-HCQPPIVHGDL 839 (1003)
Q Consensus 762 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Di 839 (1003)
+.+.+++ ...++||||++++.+.. .+.... . ..++..++.+++.++.++|. . +|+|||+
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~------~-~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl 141 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR------L-LEDPEELYDQILELMRKLYREA---GLVHGDL 141 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhhh------h-cccHHHHHHHHHHHHHHHhhcc---CcCcCCC
Confidence 4444443 12489999999954321 111110 0 15678899999999999999 7 9999999
Q ss_pred CCCceEeCCCCCeEEccccccccc
Q 001858 840 KPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 840 kp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
||+||+++ ++.++++|||.+...
T Consensus 142 ~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 142 SEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred ChhhEEEE-CCcEEEEECcccccc
Confidence 99999999 999999999999654
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.49 E-value=2.5e-15 Score=163.22 Aligned_cols=215 Identities=31% Similarity=0.435 Sum_probs=150.7
Q ss_pred EEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEE
Q 001858 321 RLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYAL 400 (1003)
Q Consensus 321 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 400 (1003)
.|.|++-+++.++.+... ..+.--...||+.|++. .+|..+..+..|+.+.|..|.+. .+|..+.++..|+.|
T Consensus 54 ~l~Ls~rrlk~fpr~a~~-----~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l 126 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAAS-----YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFL 126 (722)
T ss_pred ccccccchhhcCCCcccc-----ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHh
Confidence 466777777776666432 34455566777777777 56777777777777777777776 566666677777777
Q ss_pred EcccccccccCCCccccccccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCCeeeccCcccc
Q 001858 401 GLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLT 480 (1003)
Q Consensus 401 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 480 (1003)
+|+.|+++ ..|..++.++ |+.|-+++|+++ .+|+.++.+..|..|+.+.|.+. .+|..++++.+|+.|++..|++.
T Consensus 127 ~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~ 202 (722)
T KOG0532|consen 127 DLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE 202 (722)
T ss_pred hhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh
Confidence 77777766 5565555553 666666667666 56666666666666666666666 56666666666666666666666
Q ss_pred CCCchhhhhhccccccccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCCCccccCCccc
Q 001858 481 GTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSL 560 (1003)
Q Consensus 481 ~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 560 (1003)
.+|++ +..| .|..||+|.|+++ .+|-.|.+++.|++|-|.+|.++ ..|..+
T Consensus 203 -~lp~E-------------------------l~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 203 -DLPEE-------------------------LCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred -hCCHH-------------------------HhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHH
Confidence 45544 4433 3889999999998 89999999999999999999998 667665
Q ss_pred ccc---cCcCeeeccCce
Q 001858 561 ISL---KSIEVLDLSCNN 575 (1003)
Q Consensus 561 ~~l---~~L~~L~Ls~N~ 575 (1003)
... .-.++|+..-++
T Consensus 254 C~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 254 CEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred Hhccceeeeeeecchhcc
Confidence 433 335677777775
No 457
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.49 E-value=2e-13 Score=133.69 Aligned_cols=135 Identities=19% Similarity=0.290 Sum_probs=111.1
Q ss_pred ccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCC--CCceeEeeeeeecccCCCCceEEee
Q 001858 707 LSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRH--RNLIKIITVCSSIDFKGDDFKALVY 784 (1003)
Q Consensus 707 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~ 784 (1003)
+.+.+|+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| ..+.+++++. ...+..++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEE
Confidence 45789999999999999864 6799999864433 4678999999999976 5888888773 3346789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccc
Q 001858 785 DYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 785 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~ 862 (1003)
||++++.+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.+++.|||.++.
T Consensus 73 e~~~g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99998766543 4456677899999999999997445799999999999999989999999999864
No 458
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=4.1e-15 Score=174.63 Aligned_cols=258 Identities=24% Similarity=0.272 Sum_probs=188.7
Q ss_pred hccCCccCeeeeccceEEEEEEECCC-CceEEEEEecccc--ccchHHHHHHHHHHHhcC-CCCceeEeeeeeecccCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGED-LLPVAVKVINLKQ--KGSIKSFVAECEALKNIR-HRNLIKIITVCSSIDFKGD 777 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 777 (1003)
...|.+.+.||+|+|+.|-.+....+ ...+|+|.+.... .........|..+-+.+. |+|++++++. ....
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCCC
Confidence 45688888999999999998887543 3456777665433 223445556788888886 9999999998 5567
Q ss_pred CceEEeeecccCCCHHHHHh-hcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcEeccCCCCceEeCCCC-CeEE
Q 001858 778 DFKALVYDYMQSGSLEDWLQ-QSNDQVDGNLNLIQRLNISIDVASAIEYLH-HHCQPPIVHGDLKPSNVLLDHDM-VAHV 854 (1003)
Q Consensus 778 ~~~~lv~e~~~~gsL~~~l~-~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~Dikp~Nill~~~~-~~kl 854 (1003)
+..+++.+|.+++++.+.+. .. ....+...+-.++.|+..++.|+| +. ++.|||+||+|.+++..+ ..++
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~----~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~ 166 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPD----STGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKI 166 (601)
T ss_pred cccccccCcccccccccccccCC----ccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccC
Confidence 77899999999999999883 32 114555566778999999999999 77 999999999999999999 9999
Q ss_pred cccccccccccCCccccCcccccccc-cccccCccccCCC-CCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHH
Q 001858 855 SDFGLAKFLFDRPIQETSSSSIGIKG-TVGYVAPEYGMGG-NVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFV 932 (1003)
Q Consensus 855 ~DfG~a~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~ 932 (1003)
+|||+|..+... ...........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+.........+..|.
T Consensus 167 ~df~~At~~~~~--~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~ 244 (601)
T KOG0590|consen 167 ADFGLATAYRNK--NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK 244 (601)
T ss_pred CCchhhcccccc--CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec
Confidence 999999876541 112223334567 9999999998874 556789999999999999999999877554443332222
Q ss_pred HhhCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 001858 933 KMALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVK 989 (1003)
Q Consensus 933 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~ 989 (1003)
.... ... ............++..+++..+|+.|.+.+++..
T Consensus 245 ~~~~----------~~~------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 245 SNKG----------RFT------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccc----------ccc------cCccccCChhhhhcccccccCCchhccccccccc
Confidence 2110 000 1112223344566777788888999998888754
No 459
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.46 E-value=5.8e-13 Score=139.79 Aligned_cols=139 Identities=17% Similarity=0.124 Sum_probs=105.0
Q ss_pred cCeee-eccceEEEEEEECCCCceEEEEEecccc-------------ccchHHHHHHHHHHHhcCCCCc--eeEeeeeee
Q 001858 708 SNLIG-QGSFGFVYRGNLGEDLLPVAVKVINLKQ-------------KGSIKSFVAECEALKNIRHRNL--IKIITVCSS 771 (1003)
Q Consensus 708 ~~~lg-~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~ 771 (1003)
...|| .|+.|+||.+... +..+++|.+.... ......+.+|++++..++|+++ ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 35788 8999999999885 5679999885311 1223568889999999988775 667766322
Q ss_pred cccCCCCceEEeeecccC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC
Q 001858 772 IDFKGDDFKALVYDYMQS-GSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 850 (1003)
Q Consensus 772 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~ 850 (1003)
. .......++|||++++ .+|.+++... .+++. .+.+++.+++++|+. ||+||||||+|||++.++
T Consensus 114 ~-~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 114 R-HGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred e-cCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 1 1111123599999997 6999988642 34443 356899999999999 999999999999999999
Q ss_pred CeEEcccccccc
Q 001858 851 VAHVSDFGLAKF 862 (1003)
Q Consensus 851 ~~kl~DfG~a~~ 862 (1003)
.++++|||.++.
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998864
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=4.9e-13 Score=136.30 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=147.8
Q ss_pred HhcCCCCceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 001858 755 KNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPI 834 (1003)
Q Consensus 755 ~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 834 (1003)
-.+.|.|++++..|.....+.+.....++.|||..|++.+++++.+.. ...+....-.+|+-||..||.|||+. .|.|
T Consensus 122 lqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 122 LQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 344699999999998777777778889999999999999999987654 45677888889999999999999996 7899
Q ss_pred EeccCCCCceEeCCCCCeEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhC
Q 001858 835 VHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTG 914 (1003)
Q Consensus 835 vH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g 914 (1003)
+|+++.-+-|++..+|-+|+.--.-.... ...............+-++|.|||.-.....+-++|||+||+...||..+
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h-~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTH-PSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccc-hhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 99999999999999998888521111100 00000011111123467899999997777788899999999999999987
Q ss_pred CCCCCcccCCcchhhHHHHhhCchh-HHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 001858 915 RRPTHTMFNDGLTLHGFVKMALPEK-VMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNL 991 (1003)
Q Consensus 915 ~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L 991 (1003)
..--...... ...++ ....+- . ..++ .=...+.+|+..+|..||+|.+++.|.
T Consensus 279 Eiq~tnseS~----------~~~ee~ia~~i~-~-len~------------lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 279 EIQSTNSESK----------VEVEENIANVII-G-LENG------------LQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred eeccCCCcce----------eehhhhhhhhee-e-ccCc------------cccCcCcccccCCCCCCcchhhhhcCc
Confidence 6542211110 00111 111111 0 0111 012456799999999999999998764
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.37 E-value=6.9e-13 Score=152.08 Aligned_cols=198 Identities=31% Similarity=0.472 Sum_probs=101.6
Q ss_pred EEEecccccccccCccCcCCCCCceeecccccccCCCCcccccccc-ccceEEccCcccccccCCCCCCCCCcceeeeec
Q 001858 128 VLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNLTGEIPAYIGYYWL-KLENLNVAENQLTGQLPPSIGNISTLQQLGVGE 206 (1003)
Q Consensus 128 ~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~-~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~ 206 (1003)
.|+++.|.+. .-+..+..++.++.|++.+|.++ .||...+.. . +|+.|++++|++. .+|..++++++|+.|++++
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~-~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLL-KSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccc-hhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 5666666664 23334445556666666666665 555444331 1 4555555555555 4444455555555555555
Q ss_pred cccCCCCcccccCCCCCCeEecCCccCCCCCCCcccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCcC
Q 001858 207 NKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIP 286 (1003)
Q Consensus 207 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p 286 (1003)
|++. .+|...+.+++|+.|++++|+++. +|..+. ....|++|.+++|.+. ..+
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~~------------------------l~~~~~-~~~~L~~l~~~~N~~~-~~~ 225 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKISD------------------------LPPEIE-LLSALEELDLSNNSII-ELL 225 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCcccc------------------------Cchhhh-hhhhhhhhhhcCCcce-ecc
Confidence 5555 344333344455555555555543 333321 2233555555555332 344
Q ss_pred ccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcc
Q 001858 287 QSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPR 365 (1003)
Q Consensus 287 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 365 (1003)
..+.+++++..|.+++|++... +..+..+++++.|++++|.+++++. +..+.+|+.|++++|.+....|.
T Consensus 226 ~~~~~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~i~~i~~--------~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 226 SSLSNLKNLSGLELSNNKLEDL-PESIGNLSNLETLDLSNNQISSISS--------LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhhhhcccccccccCCceeeec-cchhccccccceecccccccccccc--------ccccCccCEEeccCccccccchh
Confidence 5556666666666666665532 3344555555666666665554331 33455566666666665544333
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.34 E-value=8.5e-13 Score=151.33 Aligned_cols=182 Identities=38% Similarity=0.571 Sum_probs=113.9
Q ss_pred cCCCCccEEEcccccccccCCCcccccc-ccceeccccccccccccccccCCCccceeecccccccccCCccccCCCCCC
Q 001858 392 RNLANIYALGLEYNQLTGTIPYTIGELI-NLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCKNLM 470 (1003)
Q Consensus 392 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 470 (1003)
..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+..++|+
T Consensus 113 ~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~ 189 (394)
T COG4886 113 LELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN 189 (394)
T ss_pred hcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhh
Confidence 34456666666666666 5555555553 7777777777776 44556677777777777777777 5666555677777
Q ss_pred eeeccCccccCCCchhhhhhccccccccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCC
Q 001858 471 LLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDN 550 (1003)
Q Consensus 471 ~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 550 (1003)
.|++++|+++ .+|... .....|++|++++|.+. .++..+..+.++..|.+.+|
T Consensus 190 ~L~ls~N~i~-~l~~~~-------------------------~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n 242 (394)
T COG4886 190 NLDLSGNKIS-DLPPEI-------------------------ELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNN 242 (394)
T ss_pred heeccCCccc-cCchhh-------------------------hhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCc
Confidence 7777777777 455432 23334666666666443 45555666666666666666
Q ss_pred CccccCCcccccccCcCeeeccCceeccCCcccccCCCccceEecCCCcccccCCC
Q 001858 551 SFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYLNLSYNDFEGQVPT 606 (1003)
Q Consensus 551 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 606 (1003)
++. .++..++.+++++.|++++|+++...+ +..+.+++.|++++|.+....|.
T Consensus 243 ~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 243 KLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred eee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 665 335556666666666666666663322 66666666666666666655443
No 463
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.31 E-value=6e-11 Score=135.58 Aligned_cols=141 Identities=20% Similarity=0.239 Sum_probs=99.9
Q ss_pred cCeeeeccceEEEEEEECCCCceEEEEEeccccccc----------------------------------------hHHH
Q 001858 708 SNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGS----------------------------------------IKSF 747 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~ 747 (1003)
.+.||.|++|.||+|+.. +|+.||||+.+...... .-+|
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 468999999999999986 68899999986331100 0135
Q ss_pred HHHHHHHHhc----CCCCceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHH-H
Q 001858 748 VAECEALKNI----RHRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVAS-A 822 (1003)
Q Consensus 748 ~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~-~ 822 (1003)
.+|++.+.++ +|.+-+.+-.++.. .....++||||++|++|.++...... .. .+.+++.+++. .
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~vLvmE~i~G~~L~~~~~~~~~----~~---~~~~ia~~~~~~~ 269 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWD----RTSERVLTMEWIDGIPLSDIAALDEA----GL---DRKALAENLARSF 269 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehh----hcCCceEEEEeECCcccccHHHHHhc----CC---CHHHHHHHHHHHH
Confidence 5566666665 23333333333321 12345899999999999988754211 11 23456666666 4
Q ss_pred HHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 823 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 823 l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
+..+|.. |++|+|++|.||+++.++.++++|||++..+
T Consensus 270 l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 270 LNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred HHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 6788988 9999999999999999999999999999765
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=4.8e-12 Score=141.40 Aligned_cols=203 Identities=26% Similarity=0.335 Sum_probs=160.7
Q ss_pred cCCccCeeee--ccceEEEEEEE--CCCCceEEEEEec--cccccchHHHHHHHHHHHhc-CCCCceeEeeeeeecccCC
Q 001858 704 EFSLSNLIGQ--GSFGFVYRGNL--GEDLLPVAVKVIN--LKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 704 ~~~~~~~lg~--G~~g~Vy~~~~--~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (1003)
.+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+ ........+=.+|+...+++ .|++.++.... +.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 3456678999 99999999998 7788899999844 23223334445677777777 59999985555 677
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCcEeccCCCCceEeCCC-CC
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVAS----AIEYLHHHCQPPIVHGDLKPSNVLLDHD-MV 851 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~ 851 (1003)
.+..++-+|++. .++.++.... ...++....+.+..+..+ |+.++|+. .++|-|+||.||+...+ ..
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~~~----~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCHTP----CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred CCcceeeecccc-chhHHhhhcc----cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccce
Confidence 888899999986 4777776553 345788888899999999 99999999 99999999999999999 88
Q ss_pred eEEcccccccccccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCCCCc
Q 001858 852 AHVSDFGLAKFLFDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHT 920 (1003)
Q Consensus 852 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~ 920 (1003)
.+++|||+...+.+..............|...|++||. ..+.++.++|+|++|.++.+..++..+...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~-~~~l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKEL-LNGLATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhh-hccccchHhhhcchhhhhHhhHhhcccccC
Confidence 99999999998877654333333333368889999997 556788999999999999999998776543
No 465
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.23 E-value=9.6e-11 Score=131.91 Aligned_cols=172 Identities=19% Similarity=0.228 Sum_probs=131.6
Q ss_pred EEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcC
Q 001858 721 RGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSN 800 (1003)
Q Consensus 721 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 800 (1003)
.|..+.++.+|.|+..+...........+-++.++.++||+|+++++. ++.++..|+|+|.+. .|..++++-
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk~l- 101 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLKEL- 101 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHHHh-
Confidence 466777888999999886655445667788899999999999999987 566778999999983 688888762
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccccccccCCccccCcccccccc
Q 001858 801 DQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFLFDRPIQETSSSSIGIKG 880 (1003)
Q Consensus 801 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~g 880 (1003)
.......-+.||+.||.|||..+ +++|++|.-..|+|++.|..||++|.++........ ......-
T Consensus 102 -------~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-----~~~~~~~ 167 (690)
T KOG1243|consen 102 -------GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-----PAKSLYL 167 (690)
T ss_pred -------HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-----ccccchh
Confidence 25566778899999999999765 899999999999999999999999998865422111 1111122
Q ss_pred cccccCccccCCCCCCccccchhHHHHHHHHHhCCC
Q 001858 881 TVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRR 916 (1003)
Q Consensus 881 t~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~ 916 (1003)
-..|..|+.+.... -..|.|.|||+++|++.|..
T Consensus 168 ~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 168 IESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred hhcccChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 23466666543332 34699999999999999943
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.21 E-value=3e-10 Score=130.94 Aligned_cols=145 Identities=17% Similarity=0.162 Sum_probs=94.3
Q ss_pred ccCCccCeeeeccceEEEEEEECCCCceEEEEEecccccc----------------------------------ch----
Q 001858 703 NEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG----------------------------------SI---- 744 (1003)
Q Consensus 703 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------------------~~---- 744 (1003)
.+|+. +.+|.|++|.||+|+.+.+|+.||||+.++.-.. ..
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 7999999999999999877999999999743110 00
Q ss_pred --HHHHHHHHHHHhcC----CCCceeEeeeeeecccCCCCceEEeeecccCCCHHHHH--hhcCCCCCCCCCHHHHHHHH
Q 001858 745 --KSFVAECEALKNIR----HRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWL--QQSNDQVDGNLNLIQRLNIS 816 (1003)
Q Consensus 745 --~~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~l~~~~~~~i~ 816 (1003)
-+|.+|+..+.+++ +...+.+-.++.+ -....++||||++|+.+.++- ..... ....+....+..++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d----~st~~VLvmE~i~G~~l~d~~~l~~~g~-d~~~la~~~v~~~~ 273 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWD----YCSETVMVMERMYGIPVSDVAALRAAGT-DMKLLAERGVEVFF 273 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecc----cCCCceEEEeeecCccHHhHHHHHhcCC-CHHHHHHHHHHHHH
Confidence 12445555555542 4444443333211 123458999999999998753 22110 00112222223333
Q ss_pred HHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC----CeEEccccccccc
Q 001858 817 IDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM----VAHVSDFGLAKFL 863 (1003)
Q Consensus 817 ~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~----~~kl~DfG~a~~~ 863 (1003)
.| +... |++|+|++|.||+++.++ .+++.|||++..+
T Consensus 274 ~Q-------if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 274 TQ-------VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HH-------HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 33 3445 999999999999999888 9999999999765
No 467
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.20 E-value=3.7e-10 Score=119.51 Aligned_cols=279 Identities=15% Similarity=0.128 Sum_probs=175.3
Q ss_pred CccCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhc-CCCCceeEeeeeeeccc--CCCCceEE
Q 001858 706 SLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNI-RHRNLIKIITVCSSIDF--KGDDFKAL 782 (1003)
Q Consensus 706 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~--~~~~~~~l 782 (1003)
...+.||+|+.+.+|-.-.-.+ .+.|++.........+ .+..+... .||-+-.-+.+-...-+ .......+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d---~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD---QVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchhhc---hhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 4567899999999996543322 4567776444332222 22233333 56644321221111001 11222456
Q ss_pred eeecccCC-CHHHHHhhc-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccccc
Q 001858 783 VYDYMQSG-SLEDWLQQS-NDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 783 v~e~~~~g-sL~~~l~~~-~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a 860 (1003)
.|..+.+. ...+++... +.+.-....|...+++++.++.+.+.||+. |.+-+|+.++|+||++++.+.+.|-..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 77777664 233333321 223345789999999999999999999999 9999999999999999999999875433
Q ss_pred cccccCCccccCcccccccccccccCccccC-----CCCCCccccchhHHHHHHHHHhC-CCCCCcccCCcchhhHHHHh
Q 001858 861 KFLFDRPIQETSSSSIGIKGTVGYVAPEYGM-----GGNVSLTGDVYSFGILLLEMFTG-RRPTHTMFNDGLTLHGFVKM 934 (1003)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~ell~g-~~P~~~~~~~~~~~~~~~~~ 934 (1003)
.. ..........+|...|.+||... +...+...|-|.+|+++++++.| ++||++..........+ +.
T Consensus 165 qi------~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~-E~ 237 (637)
T COG4248 165 QI------NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPL-ET 237 (637)
T ss_pred ee------ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcc-hh
Confidence 22 12233344567899999999754 33456779999999999999985 99998864321110000 00
Q ss_pred hC-chhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccC--CCCCCCHHHHHHHHHHHHhhhhc
Q 001858 935 AL-PEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMES--PSERIHMADAVKNLCAAREKYKG 1000 (1003)
Q Consensus 935 ~~-~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~--p~~RPs~~ev~~~L~~~~~~~~~ 1000 (1003)
.+ .......-+...-..|.++.+..+....++.-+..+|.... +.-||+++.++..|.++.+++..
T Consensus 238 ~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 238 DIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred hhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 00 00000111122223344455566667777888888888764 56799999999999999988754
No 468
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.19 E-value=6.6e-13 Score=137.12 Aligned_cols=95 Identities=21% Similarity=0.385 Sum_probs=51.1
Q ss_pred ccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCC----CcccccccccccccccccccccCcc
Q 001858 312 DFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGS----LPRSIANLSTITIIAMGLNQISGTI 387 (1003)
Q Consensus 312 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~ 387 (1003)
.|...+.|+.+.++.|.|..-.. ......+..|++|+.|||++|-++.. +...+..+++|++|++++|.++...
T Consensus 180 ~~~~~~~leevr~~qN~I~~eG~--~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~G 257 (382)
T KOG1909|consen 180 AFQSHPTLEEVRLSQNGIRPEGV--TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEG 257 (382)
T ss_pred HHHhccccceEEEecccccCchh--HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccccccc
Confidence 35555667777777776654332 23345666777777777777777632 2333444455555555555555433
Q ss_pred cccc-----cCCCCccEEEccccccc
Q 001858 388 PLEI-----RNLANIYALGLEYNQLT 408 (1003)
Q Consensus 388 p~~~-----~~l~~L~~L~L~~N~l~ 408 (1003)
..+| ...++|++|.|.+|.|+
T Consensus 258 a~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 258 AIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred HHHHHHHHhccCCCCceeccCcchhH
Confidence 3322 12344444444444444
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.19 E-value=4.3e-12 Score=127.56 Aligned_cols=132 Identities=29% Similarity=0.292 Sum_probs=99.3
Q ss_pred CccceeecccccccccCCccccCCCCCCeeeccCccccCCCchhhhhhccccccccCCCCcccccccccccccccccccc
Q 001858 443 STLNSLWLGFNNLQGNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLD 522 (1003)
Q Consensus 443 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~ 522 (1003)
..|+++||++|.|+ .+.++..-++.++.|++|+|.|+ . +. .+..+++|+.||
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~-------------------------v~-nLa~L~~L~~LD 335 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-T-------------------------VQ-NLAELPQLQLLD 335 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEecccccee-e-------------------------eh-hhhhcccceEee
Confidence 45667777777776 56666666677777777777765 1 11 156678899999
Q ss_pred ccccccccccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCC-cccccCCCccceEecCCCccc
Q 001858 523 ISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQI-PEYLEDLSFLEYLNLSYNDFE 601 (1003)
Q Consensus 523 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~l~~N~l~ 601 (1003)
||+|.++ .+-.+=.++.+.+.|.|+.|.|.. -..+.++-+|..||+++|+|.... ...++++|-|+.+.|.+|++.
T Consensus 336 LS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 336 LSGNLLA-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred cccchhH-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 9999997 666676778889999999999873 245778888999999999997533 256889999999999999998
Q ss_pred ccCC
Q 001858 602 GQVP 605 (1003)
Q Consensus 602 ~~~p 605 (1003)
+.+.
T Consensus 413 ~~vd 416 (490)
T KOG1259|consen 413 GSVD 416 (490)
T ss_pred ccch
Confidence 7543
No 470
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.15 E-value=4e-10 Score=112.58 Aligned_cols=137 Identities=21% Similarity=0.206 Sum_probs=99.2
Q ss_pred cCeeeeccceEEEEEEECC------CCceEEEEEecccc------------c----------cchHHHH----HHHHHHH
Q 001858 708 SNLIGQGSFGFVYRGNLGE------DLLPVAVKVINLKQ------------K----------GSIKSFV----AECEALK 755 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~------~~~~vavK~~~~~~------------~----------~~~~~~~----~E~~~l~ 755 (1003)
...||.|..+.||.|.... .+..+|||+.+... + ...+.+. +|++.++
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998653 35789999985210 0 0122333 7999999
Q ss_pred hcC--CCCceeEeeeeeecccCCCCceEEeeecccCCCHHH-HHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCC
Q 001858 756 NIR--HRNLIKIITVCSSIDFKGDDFKALVYDYMQSGSLED-WLQQSNDQVDGNLNLIQRLNISIDVASAIEYL-HHHCQ 831 (1003)
Q Consensus 756 ~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~ 831 (1003)
++. .-++.+++++ ...++||||+.++.+.. .++. ..++..+...+..+++.++..+ |+.
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H~~-- 144 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYKEC-- 144 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 984 3566677764 12389999998754322 2221 2344556677889999999999 788
Q ss_pred CCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 832 PPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 832 ~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
++||||+++.||+++ ++.+.++|||.|...
T Consensus 145 -glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 -NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred -CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999996 578999999988643
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=6.2e-12 Score=133.38 Aligned_cols=194 Identities=21% Similarity=0.227 Sum_probs=105.0
Q ss_pred ccCCCCCCeEecCCccCCCCCCC---cccCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccC-cCcccccc
Q 001858 217 LGQLRDLNFLSVAENNFSGMLPP---IFNISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGS-IPQSFSNA 292 (1003)
Q Consensus 217 l~~l~~L~~L~L~~N~l~~~~~~---~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l 292 (1003)
...|++++.|||+.|-+....+. ...+++|+.|.|+.|++.-......-..++.|+.|.|+.|.++.. +...+..+
T Consensus 142 ~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~f 221 (505)
T KOG3207|consen 142 SKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTF 221 (505)
T ss_pred hhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhC
Confidence 33444444444444444332211 123444444444444443222222222567888888888888722 22344567
Q ss_pred ccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCccccccccc
Q 001858 293 SNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSIANLST 372 (1003)
Q Consensus 293 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 372 (1003)
++|+.|+|+.|....+......-+..|+.|+|++|++-+.+.+ .....++.|+.|+++.+.+...--...
T Consensus 222 Psl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~-----~~~~~l~~L~~Lnls~tgi~si~~~d~----- 291 (505)
T KOG3207|consen 222 PSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQG-----YKVGTLPGLNQLNLSSTGIASIAEPDV----- 291 (505)
T ss_pred CcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccc-----cccccccchhhhhccccCcchhcCCCc-----
Confidence 7888888888864444444455666777777777777654432 234556666666666666653211000
Q ss_pred ccccccccccccCcccccccCCCCccEEEcccccccc-cCCCccccccccceeccccccccc
Q 001858 373 ITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTG-TIPYTIGELINLQALDFSANNLHG 433 (1003)
Q Consensus 373 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~ 433 (1003)
..-+-...+++|++|+++.|++.. ..-..+..+.+|+.|....|.|+.
T Consensus 292 -------------~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 292 -------------ESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred -------------cchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 000112456677777777777752 111244556677777877887763
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=1.1e-11 Score=131.59 Aligned_cols=167 Identities=22% Similarity=0.289 Sum_probs=100.4
Q ss_pred CCCCCcceeeeeccccCCCCc--ccccCCCCCCeEecCCccCCCCCCC--cccCCchhHHhhcccccCCCCCcccccCcc
Q 001858 194 GNISTLQQLGVGENKLYGIIP--ESLGQLRDLNFLSVAENNFSGMLPP--IFNISSLEQISLLTNRFEGRLPLNIGFNLP 269 (1003)
Q Consensus 194 ~~l~~L~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~ 269 (1003)
..|++++.|||++|-+..-.| .-...|++|+.|+|+.|++...... ...++.|+.|.|+.|.++-.=-..+...+|
T Consensus 143 k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fP 222 (505)
T KOG3207|consen 143 KILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFP 222 (505)
T ss_pred hhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCC
Confidence 344445555555544442211 2234445555555555554433222 123445555555555554221122333678
Q ss_pred ccceeeccCcccccCcCccccccccchhhhccCccccCcc-CcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCC
Q 001858 270 KLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKV-GIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSK 348 (1003)
Q Consensus 270 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~ 348 (1003)
+|+.|+|..|.....-.....-+..|+.|||++|++-... ....+.++.|+.|+++.+.|.++...+.+........++
T Consensus 223 sl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~k 302 (505)
T KOG3207|consen 223 SLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPK 302 (505)
T ss_pred cHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhccccc
Confidence 8888888888533344445566788899999999876443 234578889999999999988877665554555667788
Q ss_pred CcEeeccCcCCC
Q 001858 349 LETLGLNSNRFG 360 (1003)
Q Consensus 349 L~~L~L~~N~l~ 360 (1003)
|++|++..|++.
T Consensus 303 L~~L~i~~N~I~ 314 (505)
T KOG3207|consen 303 LEYLNISENNIR 314 (505)
T ss_pred ceeeecccCccc
Confidence 888888888885
No 473
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.11 E-value=1.7e-10 Score=115.38 Aligned_cols=130 Identities=18% Similarity=0.156 Sum_probs=95.6
Q ss_pred cCeeeeccceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCce-eEeeeeeecccCCCCceEEeeec
Q 001858 708 SNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLI-KIITVCSSIDFKGDDFKALVYDY 786 (1003)
Q Consensus 708 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~~lv~e~ 786 (1003)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+++++.+.+.+++ +++.+. ....++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-------~~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-------PETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-------CCCCeEEEEe
Confidence 357899999999999875 66899999764332 234567899999998654443 455432 1234799999
Q ss_pred ccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcEeccCCCCceEeCCCCCeEEccccccc
Q 001858 787 MQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHC--QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAK 861 (1003)
Q Consensus 787 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~ 861 (1003)
++|.++.+. . .....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 73 i~G~~l~~~-~------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 73 IEGSELLTE-D------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cCCCccccc-c------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999877543 0 011345678999999999982 12359999999999998 6789999999885
No 474
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.10 E-value=5.5e-12 Score=130.41 Aligned_cols=140 Identities=24% Similarity=0.333 Sum_probs=104.0
Q ss_pred CCCccceeeccccccccc----CCccccCCCCCCeeeccCccccCCCchhhhhhccccccccCCCCcccccccccccccc
Q 001858 441 NLSTLNSLWLGFNNLQGN----IPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLK 516 (1003)
Q Consensus 441 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~ 516 (1003)
.-+.|+.+..++|++... +...|...+.|+.+.+++|.|. |+..- .+-..|..++
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~---~eG~~------------------al~eal~~~~ 213 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIR---PEGVT------------------ALAEALEHCP 213 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEeccccc---CchhH------------------HHHHHHHhCC
Confidence 346788888888888732 3345677788999999999876 33320 1233477889
Q ss_pred ccccccccccccccc----cCccccCcccccEEEecCCCccccCCcccc-----cccCcCeeeccCceecc----CCccc
Q 001858 517 NLIQLDISRNRFSGE----IPTTLSSCTSLEYLKMQDNSFRGSIPSSLI-----SLKSIEVLDLSCNNLSG----QIPEY 583 (1003)
Q Consensus 517 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~----~~p~~ 583 (1003)
+|+.|||.+|-|+.. +...+..++.|+.|++++|.++..-..+|. ..++|++|+|.+|.|+. .+...
T Consensus 214 ~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~ 293 (382)
T KOG1909|consen 214 HLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAAC 293 (382)
T ss_pred cceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHH
Confidence 999999999999743 445778889999999999999854433332 26899999999999974 23345
Q ss_pred ccCCCccceEecCCCccc
Q 001858 584 LEDLSFLEYLNLSYNDFE 601 (1003)
Q Consensus 584 l~~l~~L~~L~l~~N~l~ 601 (1003)
+...+.|..|+|++|.+.
T Consensus 294 ~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 294 MAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HhcchhhHHhcCCccccc
Confidence 567899999999999994
No 475
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=99.08 E-value=9.9e-11 Score=85.92 Aligned_cols=39 Identities=56% Similarity=1.058 Sum_probs=31.2
Q ss_pred HhHHHHHHHHHHhcC-CCCCCCCCCCCC--CCCCceeeEEeC
Q 001858 34 ETDRVALLAIKSQLQ-DPMGITSSWNNS--INVCQWTGVTCG 72 (1003)
Q Consensus 34 ~~~~~al~~~k~~~~-d~~~~~~sW~~~--~~~c~w~gv~c~ 72 (1003)
++|++||++||+++. ||.+.+++|+.+ .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 579999999999997 677899999876 799999999996
No 476
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.07 E-value=2.9e-11 Score=121.71 Aligned_cols=134 Identities=28% Similarity=0.348 Sum_probs=73.2
Q ss_pred cccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccc
Q 001858 288 SFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSI 367 (1003)
Q Consensus 288 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 367 (1003)
.......|++||||+|.|+. +.....-+|.++.|++++|.|..+. . +
T Consensus 279 ~~dTWq~LtelDLS~N~I~~-iDESvKL~Pkir~L~lS~N~i~~v~--------n------------------------L 325 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLITQ-IDESVKLAPKLRRLILSQNRIRTVQ--------N------------------------L 325 (490)
T ss_pred ecchHhhhhhccccccchhh-hhhhhhhccceeEEeccccceeeeh--------h------------------------h
Confidence 33344556666666666652 2233444455555555555544321 2 4
Q ss_pred cccccccccccccccccCcccccccCCCCccEEEcccccccccCCCccccccccceeccccccccccc-cccccCCCccc
Q 001858 368 ANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGII-PDSIGNLSTLN 446 (1003)
Q Consensus 368 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~ 446 (1003)
+.+++|+.|||++|.++ .+..+-.++.+.+.|.|++|.|. .-..+.++-+|..||+++|+|.... -..+++++.|+
T Consensus 326 a~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE 402 (490)
T KOG1259|consen 326 AELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLE 402 (490)
T ss_pred hhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHHH
Confidence 44444444444444444 22333345556666666666664 2234556667777777777776331 23567777777
Q ss_pred eeecccccccc
Q 001858 447 SLWLGFNNLQG 457 (1003)
Q Consensus 447 ~L~L~~N~l~~ 457 (1003)
.+.|.+|.+.+
T Consensus 403 ~l~L~~NPl~~ 413 (490)
T KOG1259|consen 403 TLRLTGNPLAG 413 (490)
T ss_pred HHhhcCCCccc
Confidence 77777777774
No 477
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.07 E-value=2.3e-11 Score=139.48 Aligned_cols=82 Identities=28% Similarity=0.288 Sum_probs=46.4
Q ss_pred cccccccccccccccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCceecc---CCccc-ccCCCccceE
Q 001858 518 LIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSG---QIPEY-LEDLSFLEYL 593 (1003)
Q Consensus 518 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~-l~~l~~L~~L 593 (1003)
|+.+++++|.+. .++..+..+..+..|++.+|++... ..+.....+..+.++.|++.. ..... ....+.+..+
T Consensus 234 L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (414)
T KOG0531|consen 234 LRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTL 310 (414)
T ss_pred HHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhcccccccccccccc
Confidence 667777777775 4445566666666667776666532 224445555666666666542 11111 3445556666
Q ss_pred ecCCCcccc
Q 001858 594 NLSYNDFEG 602 (1003)
Q Consensus 594 ~l~~N~l~~ 602 (1003)
.+.+|+...
T Consensus 311 ~~~~~~~~~ 319 (414)
T KOG0531|consen 311 TLELNPIRK 319 (414)
T ss_pred ccccCcccc
Confidence 666666554
No 478
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=3.3e-11 Score=138.24 Aligned_cols=246 Identities=27% Similarity=0.292 Sum_probs=115.5
Q ss_pred ccccceeeccCcccccCcCccccccccchhhhccCccccCccCcccCCCCcccEEecCCCCCCCCCCCChhhHhhhcCCC
Q 001858 268 LPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNITRLNLGQNNLGSGSIGDLDFITLLTNCS 347 (1003)
Q Consensus 268 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 347 (1003)
+..++.+.++.|.|.. +-..+..+++|+.|++.+|+|..+... +..+++|++|++++|.|+.+. .+..++
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~ls~N~I~~i~--------~l~~l~ 140 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDLSFNKITKLE--------GLSTLT 140 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccc-hhhhhcchheecccccccccc--------chhhcc
Confidence 3444555555555552 223355556666666666666544321 445566666666666665432 233444
Q ss_pred CCcEeeccCcCCCCCCcccccccccccccccccccccCcccccccCCCCccEEEcccccccccCCCccccccccceeccc
Q 001858 348 KLETLGLNSNRFGGSLPRSIANLSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFS 427 (1003)
Q Consensus 348 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 427 (1003)
.|+.|++++|.|.. ...+..+..|+.+++++|++...-+. . ...+.+++.+++.
T Consensus 141 ~L~~L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~-----------------------~-~~~~~~l~~l~l~ 194 (414)
T KOG0531|consen 141 LLKELNLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIEND-----------------------E-LSELISLEELDLG 194 (414)
T ss_pred chhhheeccCcchh--ccCCccchhhhcccCCcchhhhhhhh-----------------------h-hhhccchHHHhcc
Confidence 55666666665552 12222244444444444444422220 1 2344445555555
Q ss_pred cccccccccccccCCCccceeecccccccccCCccccCCC--CCCeeeccCccccCCCchhhhhhccccccccCCCCccc
Q 001858 428 ANNLHGIIPDSIGNLSTLNSLWLGFNNLQGNIPSSLGNCK--NLMLLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLIS 505 (1003)
Q Consensus 428 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~ 505 (1003)
+|.+... ..+..+..+..+++..|.++..-+ +..+. .|+.+++++|++. .++
T Consensus 195 ~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~--------------------- 248 (414)
T KOG0531|consen 195 GNSIREI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSP--------------------- 248 (414)
T ss_pred CCchhcc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-ccc---------------------
Confidence 5554421 223333334444555555442111 11111 2555555555554 111
Q ss_pred cccccccccccccccccccccccccccCccccCcccccEEEecCCCcccc---CCcc-cccccCcCeeeccCceeccCCc
Q 001858 506 GSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGS---IPSS-LISLKSIEVLDLSCNNLSGQIP 581 (1003)
Q Consensus 506 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~-~~~l~~L~~L~Ls~N~l~~~~p 581 (1003)
..+..+.++..|++++|++... ..+.....+..+.+..|++... .... ....+.++.+.+..|.+....+
T Consensus 249 ----~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 249 ----EGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ----ccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 1133445555666666655422 2234445555555666655421 1111 4455667777777777765444
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=1.3e-10 Score=113.64 Aligned_cols=79 Identities=29% Similarity=0.333 Sum_probs=22.1
Q ss_pred ccccccccccccccccccCccc-cCcccccEEEecCCCccccC-CcccccccCcCeeeccCceeccCCc---ccccCCCc
Q 001858 515 LKNLIQLDISRNRFSGEIPTTL-SSCTSLEYLKMQDNSFRGSI-PSSLISLKSIEVLDLSCNNLSGQIP---EYLEDLSF 589 (1003)
Q Consensus 515 l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~ 589 (1003)
++.|+.|++++|+|+ .+++.+ ..+++|++|+|++|+|...- -..+..+++|+.|+|.+|+++...- ..+..+|+
T Consensus 63 L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~ 141 (175)
T PF14580_consen 63 LPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPS 141 (175)
T ss_dssp -TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT
T ss_pred hhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcCh
Confidence 344444444444444 222222 23444444444444443211 1233444555555555555542210 12344555
Q ss_pred cceEe
Q 001858 590 LEYLN 594 (1003)
Q Consensus 590 L~~L~ 594 (1003)
|+.||
T Consensus 142 Lk~LD 146 (175)
T PF14580_consen 142 LKVLD 146 (175)
T ss_dssp -SEET
T ss_pred hheeC
Confidence 55544
No 480
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.97 E-value=5.1e-10 Score=109.55 Aligned_cols=106 Identities=26% Similarity=0.349 Sum_probs=23.2
Q ss_pred cccchhhhccCccccCccCcccC-CCCcccEEecCCCCCCCCCCCChhhHhhhcCCCCCcEeeccCcCCCCCCcccc-cc
Q 001858 292 ASNLVILNLSGNHFSGKVGIDFS-SLPNITRLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLNSNRFGGSLPRSI-AN 369 (1003)
Q Consensus 292 l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~ 369 (1003)
..++++|+|++|.|+.+. .++ .+.+|+.|+|++|.|+.++ .+..+++|++|++++|+|+.. .+.+ ..
T Consensus 18 ~~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l~--------~l~~L~~L~~L~L~~N~I~~i-~~~l~~~ 86 (175)
T PF14580_consen 18 PVKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKLE--------GLPGLPRLKTLDLSNNRISSI-SEGLDKN 86 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S--T--------T----TT--EEE--SS---S--CHHHHHH
T ss_pred cccccccccccccccccc--chhhhhcCCCEEECCCCCCcccc--------CccChhhhhhcccCCCCCCcc-ccchHHh
Confidence 334455555555554332 122 3444555555555554432 233445555555555555532 2222 23
Q ss_pred cccccccccccccccCc-ccccccCCCCccEEEccccccc
Q 001858 370 LSTITIIAMGLNQISGT-IPLEIRNLANIYALGLEYNQLT 408 (1003)
Q Consensus 370 l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~ 408 (1003)
+++|+.|++++|+|... .-..++.+++|+.|+|.+|.++
T Consensus 87 lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 87 LPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 44444444444444321 1123444555555555555554
No 481
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=3.3e-10 Score=138.18 Aligned_cols=86 Identities=22% Similarity=0.379 Sum_probs=40.1
Q ss_pred CcCCCCCceeecccccccCCCCccccccccccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCC
Q 001858 144 LSHCSNLINFSVRRNNLTGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDL 223 (1003)
Q Consensus 144 l~~l~~L~~L~l~~N~l~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 223 (1003)
|..++.|++|||++|.--+++|..|+.+ -+|++|+|++..++ .+|..+++|..|.+|++..+.-...+|..+..+.+|
T Consensus 567 f~~m~~LrVLDLs~~~~l~~LP~~I~~L-i~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~L 644 (889)
T KOG4658|consen 567 FRSLPLLRVLDLSGNSSLSKLPSSIGEL-VHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSL 644 (889)
T ss_pred HhhCcceEEEECCCCCccCcCChHHhhh-hhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccc
Confidence 3344444444444444434444444433 34444444444444 445555555555555555444333334444445555
Q ss_pred CeEecCCc
Q 001858 224 NFLSVAEN 231 (1003)
Q Consensus 224 ~~L~L~~N 231 (1003)
++|.+..-
T Consensus 645 r~L~l~~s 652 (889)
T KOG4658|consen 645 RVLRLPRS 652 (889)
T ss_pred cEEEeecc
Confidence 55554433
No 482
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.90 E-value=1.2e-08 Score=97.68 Aligned_cols=128 Identities=30% Similarity=0.395 Sum_probs=95.0
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccc--------ccchHHHHHHHHHHHhcCCCC--ceeEeeeeeecccCCCC
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--------KGSIKSFVAECEALKNIRHRN--LIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~ 778 (1003)
..+++|+-+.+|.+.+. +.++++|.-..+. .-...+-.+|++++.+++--. +..++++ +..
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPD 72 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCC
Confidence 46789999999999774 3346666532211 112346778999999885333 3344443 345
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
...++|||++|..|.+.+... ...++..+=.-+.-||.. ||+|+|+.++||+++.++ +.++|||
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfG 136 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFG 136 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECC
Confidence 558999999999999999763 245667777888899999 999999999999997665 9999999
Q ss_pred ccc
Q 001858 859 LAK 861 (1003)
Q Consensus 859 ~a~ 861 (1003)
++.
T Consensus 137 Lg~ 139 (204)
T COG3642 137 LGE 139 (204)
T ss_pred ccc
Confidence 996
No 483
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.89 E-value=1.6e-09 Score=121.36 Aligned_cols=251 Identities=17% Similarity=0.117 Sum_probs=166.9
Q ss_pred HhccCCccCeeeeccceEEEEEEEC-CCCceEEEEEeccccccchH--HHHHHHHHHHhc-CCCCceeEeeeeeecccCC
Q 001858 701 ATNEFSLSNLIGQGSFGFVYRGNLG-EDLLPVAVKVINLKQKGSIK--SFVAECEALKNI-RHRNLIKIITVCSSIDFKG 776 (1003)
Q Consensus 701 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (1003)
...+|..+..||.|.|+.||..... .++..|++|........... .-..|+.+...+ .|.+++++... +..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W~~ 337 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS-----WSQ 337 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-----ccc
Confidence 3457888899999999999998765 57788999987643322222 223455555555 47777765544 344
Q ss_pred CCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCC-CCeEEc
Q 001858 777 DDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVS 855 (1003)
Q Consensus 777 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~ 855 (1003)
.+..++=-||+++++....+.. ...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..++.
T Consensus 338 ~r~~~ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~ 409 (524)
T KOG0601|consen 338 LRQGYIPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLG 409 (524)
T ss_pred cccccCchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcc
Confidence 5556788999999988776633 34567777889999999999999998 99999999999999886 788999
Q ss_pred ccccccccccCCccccCcccccccccccc-cCccccCCCCCCccccchhHHHHHHHHHhCCCCCCcccCCcchhhHHHHh
Q 001858 856 DFGLAKFLFDRPIQETSSSSIGIKGTVGY-VAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRPTHTMFNDGLTLHGFVKM 934 (1003)
Q Consensus 856 DfG~a~~~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P~~~~~~~~~~~~~~~~~ 934 (1003)
|||++..+.-. .....-++..| .+|+......+..++|+||||.-+.|.+++..--... .. +
T Consensus 410 ~~~~~t~~~~~-------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~~---~------ 472 (524)
T KOG0601|consen 410 DFGCWTRLAFS-------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-VQ---S------ 472 (524)
T ss_pred cccccccccee-------cccccccccccccchhhccccccccccccccccccccccccCcccCccc-cc---c------
Confidence 99999642110 00111123334 3566666677889999999999999999876532110 00 0
Q ss_pred hCchhHHHHHHhhcccCCCCchhhHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 001858 935 ALPEKVMEIVDFALLLDPGNERAKIEECLTAVVRIGVLCSMESPSERIHMADAVKNLCAAR 995 (1003)
Q Consensus 935 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~L~~~~ 995 (1003)
.. +...... ........+..+...+..+++..||.+.+...+.+..+
T Consensus 473 ------~~-i~~~~~p-------~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 473 ------LT-IRSGDTP-------NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred ------ee-eeccccc-------CCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 00 0000000 00111134455555667788888998888876655443
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.88 E-value=7.5e-10 Score=129.92 Aligned_cols=208 Identities=23% Similarity=0.283 Sum_probs=148.8
Q ss_pred hccCCccCeeeeccceEEEEEEECCCCceEEEEEeccccc---cchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 702 TNEFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK---GSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 702 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
.+.+.+.+.+-.|+++.++.+.-..++...++|+...... ...+....+-.+.-..++|-++...-- +....
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~rs 877 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPCRS 877 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCCCC
Confidence 3566777889999999999988877776666665542211 112222222222222345655544322 34566
Q ss_pred ceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEcccc
Q 001858 779 FKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 858 (1003)
Q Consensus 779 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG 858 (1003)
..+++++|..+++|...++.. +..+....+.....+.++.+|||.. .+.|+|++|.|.+...+++.+++|||
T Consensus 878 P~~L~~~~~~~~~~~Skl~~~-----~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~ 949 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHNS-----GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFG 949 (1205)
T ss_pred CcchhhHHhccCCchhhhhcC-----CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccc
Confidence 778999999999999998874 3455555566777889999999998 79999999999999999999999998
Q ss_pred cccccccC----------------C-----c-----cccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHH
Q 001858 859 LAKFLFDR----------------P-----I-----QETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMF 912 (1003)
Q Consensus 859 ~a~~~~~~----------------~-----~-----~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell 912 (1003)
.......- . . ...........||+.|.+||...+......+|.|+.|++++|.+
T Consensus 950 t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen 950 TLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred cccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhh
Confidence 44322100 0 0 00001123466999999999999999999999999999999999
Q ss_pred hCCCCCCccc
Q 001858 913 TGRRPTHTMF 922 (1003)
Q Consensus 913 ~g~~P~~~~~ 922 (1003)
+|..||....
T Consensus 1030 ~g~pp~na~t 1039 (1205)
T KOG0606|consen 1030 TGIPPFNAET 1039 (1205)
T ss_pred cCCCCCCCcc
Confidence 9999997654
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.87 E-value=1.2e-09 Score=133.31 Aligned_cols=320 Identities=19% Similarity=0.225 Sum_probs=177.6
Q ss_pred ccccCcEEEecccccccccCccCcCCCCCceeecccccc-cCCCCccccccccccceEEccCcccccccCCCCCCCCCcc
Q 001858 122 RLSRLKVLVLDFNSFSGTIPSNLSHCSNLINFSVRRNNL-TGEIPAYIGYYWLKLENLNVAENQLTGQLPPSIGNISTLQ 200 (1003)
Q Consensus 122 ~l~~L~~L~Ls~n~l~g~ip~~l~~l~~L~~L~l~~N~l-~~~ip~~~~~~~~~L~~L~L~~n~l~~~ip~~i~~l~~L~ 200 (1003)
+....+...+-+|.+. .++.+..+ ++|.+|-+..|.. ...++..+...++.|++|||++|.=-+.+|++|++|-+|+
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred chhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 3467777888888877 56666543 3788888888862 3377777666679999999999877779999999999999
Q ss_pred eeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCCccc-CCchhHHhhcccccCCCCCcccccCccccceeeccCc
Q 001858 201 QLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFN-ISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQN 279 (1003)
Q Consensus 201 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N 279 (1003)
+|++++..+. .+|..+++|++|.+|++..+.-...++.+.. +++|+.|.+..-...
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~---------------------- 655 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALS---------------------- 655 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccc----------------------
Confidence 9999999999 8999999999999999998876555555443 666666665543311
Q ss_pred ccccCcCccccccccchhhhccCccccCccCcccCCCCccc----EEecCCCCCCCCCCCChhhHhhhcCCCCCcEeecc
Q 001858 280 NLTGSIPQSFSNASNLVILNLSGNHFSGKVGIDFSSLPNIT----RLNLGQNNLGSGSIGDLDFITLLTNCSKLETLGLN 355 (1003)
Q Consensus 280 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~ 355 (1003)
.+...-..+.++.+|+.+....... .....+..+++|. .+.+..+.... ....+..+.+|+.|.+.
T Consensus 656 -~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~~-------~~~~~~~l~~L~~L~i~ 725 (889)
T KOG4658|consen 656 -NDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKRT-------LISSLGSLGNLEELSIL 725 (889)
T ss_pred -cchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccce-------eecccccccCcceEEEE
Confidence 1111111222333333333322111 0001112222222 11111111110 11223345555555555
Q ss_pred CcCCCCCCcccccc------cccccccccccccccCcccccccCCCCccEEEcccccccccCCCccccccccceeccccc
Q 001858 356 SNRFGGSLPRSIAN------LSTITIIAMGLNQISGTIPLEIRNLANIYALGLEYNQLTGTIPYTIGELINLQALDFSAN 429 (1003)
Q Consensus 356 ~N~l~~~~p~~~~~------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 429 (1003)
++.+.......... ++++..+...++..- ..+.+..-.++|+.|++..+...+.+......+..++.+-+..+
T Consensus 726 ~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~ 804 (889)
T KOG4658|consen 726 DCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFN 804 (889)
T ss_pred cCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccc
Confidence 55554222222111 111111111111111 12222334577888888877776666666666666666666667
Q ss_pred ccccc-ccccccCCCccceeecccccccccCC---ccccCCCCCCeeeccCc
Q 001858 430 NLHGI-IPDSIGNLSTLNSLWLGFNNLQGNIP---SSLGNCKNLMLLNVSKN 477 (1003)
Q Consensus 430 ~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ls~N 477 (1003)
.+.+. .-...+.++++..+.+.+=.+....- ...+.+|.+..+.+.++
T Consensus 805 ~~~~l~~~~~l~~l~~i~~~~l~~~~l~~~~ve~~p~l~~~P~~~~~~i~~~ 856 (889)
T KOG4658|consen 805 KLEGLRMLCSLGGLPQLYWLPLSFLKLEELIVEECPKLGKLPLLSTLTIVGC 856 (889)
T ss_pred ccccceeeecCCCCceeEecccCccchhheehhcCcccccCccccccceecc
Confidence 66655 34445555555555555433331111 12345666666666664
No 486
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.86 E-value=1.6e-08 Score=106.08 Aligned_cols=145 Identities=21% Similarity=0.258 Sum_probs=107.5
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEeccccc-cchHHHHHHHHHHHhcCC--CCceeEeeeeeecccCCCCceEEeee
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQK-GSIKSFVAECEALKNIRH--RNLIKIITVCSSIDFKGDDFKALVYD 785 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e 785 (1003)
+.++.|..+.||++...+ ++.+++|+...... .....+.+|+++++.+++ ..+.+++.+..... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 578999999999998853 57899999764332 234678899999999965 34566777643211 1235689999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 001858 786 YMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHC----------------------------------- 830 (1003)
Q Consensus 786 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 830 (1003)
|++|.++.+.+.. ..++..+...++.++++++++||+..
T Consensus 81 ~i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (223)
T cd05154 81 RVDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP 154 (223)
T ss_pred EeCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence 9999887765421 24666777788888888888888521
Q ss_pred ------------------CCCcEeccCCCCceEeCC--CCCeEEcccccccc
Q 001858 831 ------------------QPPIVHGDLKPSNVLLDH--DMVAHVSDFGLAKF 862 (1003)
Q Consensus 831 ------------------~~~ivH~Dikp~Nill~~--~~~~kl~DfG~a~~ 862 (1003)
...++|+|+.|.||+++. ++.+.++||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998853
No 487
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.85 E-value=2.6e-08 Score=94.73 Aligned_cols=142 Identities=23% Similarity=0.278 Sum_probs=100.7
Q ss_pred ccCeeeeccceEEEEEEECCCCceEEEEEecccc--------ccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCC
Q 001858 707 LSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ--------KGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDD 778 (1003)
Q Consensus 707 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 778 (1003)
....+-+|+.+.|+++.+. |+.+.||.-..+. .-..++..+|++.+.+++--.|.-..-+ +.+..
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~-----~~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLI-----FIDTY 83 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE-----EEecC
Confidence 4578999999999999986 5566777532111 1124677889999998853233222111 12233
Q ss_pred ceEEeeecccC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCC---CeEE
Q 001858 779 FKALVYDYMQS-GSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHV 854 (1003)
Q Consensus 779 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~---~~kl 854 (1003)
.-.++|||++| .++.+++...... ..........+..|-+.+.-||.. +|+|+|+..+||++..++ .+.+
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~---~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~l 157 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMED---ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPIL 157 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccC---cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEE
Confidence 44799999987 4789998875432 222233367888999999999999 999999999999997655 4589
Q ss_pred ccccccc
Q 001858 855 SDFGLAK 861 (1003)
Q Consensus 855 ~DfG~a~ 861 (1003)
+|||++.
T Consensus 158 Idfgls~ 164 (229)
T KOG3087|consen 158 IDFGLSS 164 (229)
T ss_pred Eeecchh
Confidence 9999985
No 488
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.81 E-value=1.4e-07 Score=103.29 Aligned_cols=177 Identities=21% Similarity=0.224 Sum_probs=133.1
Q ss_pred cceEEEEEEECCCCceEEEEEeccccccchHHHHHHHHHHHhcCCCCceeEeeeeeecccCCCCceEEeeecccC-CCHH
Q 001858 715 SFGFVYRGNLGEDLLPVAVKVINLKQKGSIKSFVAECEALKNIRHRNLIKIITVCSSIDFKGDDFKALVYDYMQS-GSLE 793 (1003)
Q Consensus 715 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 793 (1003)
.-.+.|++....+|..|+.|+++.........-..-+++++++.|+|+|++.+++....| ++...++|++|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHH
Confidence 346899999999999999999954433332223356788999999999999998764444 36677899999987 4788
Q ss_pred HHHhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCCeEEccccccccc
Q 001858 794 DWLQQSNDQ----------VDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAKFL 863 (1003)
Q Consensus 794 ~~l~~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~DfG~a~~~ 863 (1003)
+........ .+...++...|.++.|+..||.++|+. |..-+-+.|++|+++.+.+++|+.-|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 766543322 244678999999999999999999999 9999999999999999888998877666443
Q ss_pred ccCCccccCcccccccccccccCccccCCCCCCccccchhHHHHHHHHHhCCCC
Q 001858 864 FDRPIQETSSSSIGIKGTVGYVAPEYGMGGNVSLTGDVYSFGILLLEMFTGRRP 917 (1003)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ell~g~~P 917 (1003)
...+ . |.+.+ -.+-|.=.+|.+++.+.||..-
T Consensus 444 ~~d~-----------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDP-----------------T--EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCC-----------------C--cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 2211 0 11111 1245888899999999999654
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.77 E-value=5.6e-09 Score=83.93 Aligned_cols=60 Identities=38% Similarity=0.589 Sum_probs=34.9
Q ss_pred cccEEEecCCCccccCCcccccccCcCeeeccCceeccCCcccccCCCccceEecCCCcc
Q 001858 541 SLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYLNLSYNDF 600 (1003)
Q Consensus 541 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l 600 (1003)
+|++|++++|+|+...+..|..+++|++|++++|+|+...|+.|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455566666666544444555566666666666666555555666666666666666653
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.70 E-value=6.7e-08 Score=98.29 Aligned_cols=134 Identities=26% Similarity=0.210 Sum_probs=100.2
Q ss_pred cCCccCeeeeccceEEEEEEECCCCceEEEEEecccc-----------------c-----cchHHHHHHHHHHHhcCCC-
Q 001858 704 EFSLSNLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQ-----------------K-----GSIKSFVAECEALKNIRHR- 760 (1003)
Q Consensus 704 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----------------~-----~~~~~~~~E~~~l~~l~h~- 760 (1003)
=+.++.+||.|.-+.||.|... .+.++|||.-+... . -......+|.++|.++...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 3456789999999999999987 67789999753110 0 0134567899999999654
Q ss_pred -CceeEeeeeeecccCCCCceEEeeecccCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccC
Q 001858 761 -NLIKIITVCSSIDFKGDDFKALVYDYMQSGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDL 839 (1003)
Q Consensus 761 -niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Di 839 (1003)
.+.+.+++ +...+|||+++|-.|...- ++......++..|++-+.-+-+. ||||||+
T Consensus 171 ~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~~---GiVHGDl 228 (304)
T COG0478 171 VKVPKPIAW---------NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYRR---GIVHGDL 228 (304)
T ss_pred CCCCCcccc---------ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHHc---CccccCC
Confidence 77777765 3448999999996665421 12334455666777777666677 9999999
Q ss_pred CCCceEeCCCCCeEEcccccc
Q 001858 840 KPSNVLLDHDMVAHVSDFGLA 860 (1003)
Q Consensus 840 kp~Nill~~~~~~kl~DfG~a 860 (1003)
++-||+++++|.+.++||--+
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~ 249 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQA 249 (304)
T ss_pred chheEEEecCCCEEEEeCccc
Confidence 999999999999999999544
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.70 E-value=1.5e-08 Score=81.48 Aligned_cols=59 Identities=44% Similarity=0.561 Sum_probs=30.4
Q ss_pred CccEEEcccccccccCCCccccccccceeccccccccccccccccCCCccceeeccccc
Q 001858 396 NIYALGLEYNQLTGTIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNSLWLGFNN 454 (1003)
Q Consensus 396 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 454 (1003)
+|++|++++|+++...+..|..+++|++|++++|+++.+.|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555554444455555555555555555554444455555555555555554
No 492
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.67 E-value=1.9e-09 Score=96.56 Aligned_cols=91 Identities=20% Similarity=0.311 Sum_probs=66.9
Q ss_pred cccccccccccccccccccCccccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCCcccccCCCccceE
Q 001858 514 NLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDLSFLEYL 593 (1003)
Q Consensus 514 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 593 (1003)
..+.++.|+|++|+|+ .+|.++..++.|+.|+++.|.+. ..|..+..|.+|..||..+|.+. .+|-.+-.-+.....
T Consensus 75 kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~ 151 (177)
T KOG4579|consen 75 KFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALI 151 (177)
T ss_pred ccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHH
Confidence 3446778888888887 77888888888888888888887 67777888888888888888887 444334333444555
Q ss_pred ecCCCcccccCCCC
Q 001858 594 NLSYNDFEGQVPTK 607 (1003)
Q Consensus 594 ~l~~N~l~~~~p~~ 607 (1003)
++.+++|.+..+.+
T Consensus 152 ~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 152 KLGNEPLGDETKKK 165 (177)
T ss_pred HhcCCcccccCccc
Confidence 66777787766654
No 493
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.67 E-value=4.4e-07 Score=96.36 Aligned_cols=145 Identities=15% Similarity=0.066 Sum_probs=99.9
Q ss_pred CeeeeccceEEEEEEECCCCceEEEEEecccccc-----------chHHHHHHHHHHHhcC--CCCceeEeeeeeecccC
Q 001858 709 NLIGQGSFGFVYRGNLGEDLLPVAVKVINLKQKG-----------SIKSFVAECEALKNIR--HRNLIKIITVCSSIDFK 775 (1003)
Q Consensus 709 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~ 775 (1003)
+.+-+.....|+++... |+.|.||........ ....+.+|.+.+.++. .-.+.+++++.......
T Consensus 28 e~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 45555555567777664 568999976422210 1124788999888883 22333444443221111
Q ss_pred CCCceEEeeecccCC-CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCC------
Q 001858 776 GDDFKALVYDYMQSG-SLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH------ 848 (1003)
Q Consensus 776 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~------ 848 (1003)
....-++|+|++++. +|.+++.... ....+......++.+++..++-||.. ||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCC
Confidence 123457999999986 8999986422 12345667788999999999999999 9999999999999975
Q ss_pred -CCCeEEccccccc
Q 001858 849 -DMVAHVSDFGLAK 861 (1003)
Q Consensus 849 -~~~~kl~DfG~a~ 861 (1003)
++.+.++||+.++
T Consensus 180 ~~~~~~LIDl~r~~ 193 (268)
T PRK15123 180 EDLKLSVIDLHRAQ 193 (268)
T ss_pred CCceEEEEECCccc
Confidence 4689999999885
No 494
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.66 E-value=1.4e-07 Score=94.10 Aligned_cols=124 Identities=25% Similarity=0.230 Sum_probs=81.2
Q ss_pred EEEEEEECCCCceEEEEEeccccc----------------------c----chHHHHHHHHHHHhcCCC--CceeEeeee
Q 001858 718 FVYRGNLGEDLLPVAVKVINLKQK----------------------G----SIKSFVAECEALKNIRHR--NLIKIITVC 769 (1003)
Q Consensus 718 ~Vy~~~~~~~~~~vavK~~~~~~~----------------------~----~~~~~~~E~~~l~~l~h~--niv~~~~~~ 769 (1003)
.||.|... ++..+|+|+.+.... . ......+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 38999885 567999999752100 0 023567899999999654 566777652
Q ss_pred eecccCCCCceEEeeeccc--CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCcEeccCCCCceEe
Q 001858 770 SSIDFKGDDFKALVYDYMQ--SGSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEY-LHHHCQPPIVHGDLKPSNVLL 846 (1003)
Q Consensus 770 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dikp~Nill 846 (1003)
...+||||++ |..+..+.... +...+...++.+++..+.. +|+. ||+|||+.+.||++
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv 140 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILV 140 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEE
T ss_pred ---------CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEe
Confidence 2279999999 65555443321 1123456677888886666 4677 99999999999999
Q ss_pred CCCCCeEEcccccccc
Q 001858 847 DHDMVAHVSDFGLAKF 862 (1003)
Q Consensus 847 ~~~~~~kl~DfG~a~~ 862 (1003)
+++ .+.++|||.+..
T Consensus 141 ~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 141 DDG-KVYIIDFGQAVD 155 (188)
T ss_dssp ETT-CEEE--GTTEEE
T ss_pred ecc-eEEEEecCccee
Confidence 877 999999998864
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.62 E-value=9.4e-10 Score=123.38 Aligned_cols=89 Identities=33% Similarity=0.376 Sum_probs=65.2
Q ss_pred ccccccccccccccccccccccCc-cccCcccccEEEecCCCccccCCcccccccCcCeeeccCceeccCCc-ccccCCC
Q 001858 511 VVGNLKNLIQLDISRNRFSGEIPT-TLSSCTSLEYLKMQDNSFRGSIPSSLISLKSIEVLDLSCNNLSGQIP-EYLEDLS 588 (1003)
Q Consensus 511 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~ 588 (1003)
.+..++.|++|||++|.+. .+|. ...++. |+.|++++|.++.. ..+.+|++|+.||+++|-|.+.-- ..+..|.
T Consensus 204 ~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs 279 (1096)
T KOG1859|consen 204 NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLS 279 (1096)
T ss_pred HHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHH
Confidence 3667788888888888887 5554 344444 88888888888732 357788888888888888875322 3456677
Q ss_pred ccceEecCCCccccc
Q 001858 589 FLEYLNLSYNDFEGQ 603 (1003)
Q Consensus 589 ~L~~L~l~~N~l~~~ 603 (1003)
.|..|+|.||++.+.
T Consensus 280 ~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 280 SLIVLWLEGNPLCCA 294 (1096)
T ss_pred HHHHHhhcCCccccC
Confidence 888888899888763
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.51 E-value=2.7e-09 Score=119.78 Aligned_cols=128 Identities=26% Similarity=0.301 Sum_probs=85.5
Q ss_pred cccceEEccCcccccccCCCCCCCCCcceeeeeccccCCCCcccccCCCCCCeEecCCccCCCCCCCcccCCchhHHhhc
Q 001858 173 LKLENLNVAENQLTGQLPPSIGNISTLQQLGVGENKLYGIIPESLGQLRDLNFLSVAENNFSGMLPPIFNISSLEQISLL 252 (1003)
Q Consensus 173 ~~L~~L~L~~n~l~~~ip~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~ 252 (1003)
.+|...+.++|.++ .+-.++.-++.|+.|+|++|+++.. +.+..|++|++|||+.|.+..++- +.
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~-l~----------- 228 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQ-LS----------- 228 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccc-cc-----------
Confidence 57888999999988 6777888889999999999999854 478889999999999998874321 10
Q ss_pred ccccCCCCCcccccCccccceeeccCcccccCcCccccccccchhhhccCccccCccCcc-cCCCCcccEEecCCCCCC
Q 001858 253 TNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSIPQSFSNASNLVILNLSGNHFSGKVGID-FSSLPNITRLNLGQNNLG 330 (1003)
Q Consensus 253 ~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~ 330 (1003)
-..+ +|..|.+++|.++.. ..+.++++|+.||+++|-|.+--.-. +..|..|+.|+|.+|.+-
T Consensus 229 ------------~~gc-~L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 229 ------------MVGC-KLQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ------------hhhh-hheeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 0011 256666666666532 24566666677777777665432111 244455666666666553
No 497
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.49 E-value=9e-09 Score=92.35 Aligned_cols=113 Identities=19% Similarity=0.291 Sum_probs=75.7
Q ss_pred eeeccCccccCCCchhhhhhccccccccCCCCccccccccccccccccccccccccccccccCccccCcccccEEEecCC
Q 001858 471 LLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPLVVGNLKNLIQLDISRNRFSGEIPTTLSSCTSLEYLKMQDN 550 (1003)
Q Consensus 471 ~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 550 (1003)
..+|++|.+. .+|+.+....+..+.++|++|+|+ .+|.++..++.|+.|+++.|.+. ..|..+..+.+|..|+..+|
T Consensus 57 ~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~n 133 (177)
T KOG4579|consen 57 KISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPEN 133 (177)
T ss_pred EEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCC
Confidence 3344444444 444444444444444455555554 45556888889999999999998 77888888999999999999
Q ss_pred CccccCCcccccccCcCeeeccCceeccCCcccccCC
Q 001858 551 SFRGSIPSSLISLKSIEVLDLSCNNLSGQIPEYLEDL 587 (1003)
Q Consensus 551 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 587 (1003)
.+. .+|-.+..-...-..++.++.+.+.-+..++.+
T Consensus 134 a~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa~ 169 (177)
T KOG4579|consen 134 ARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQAL 169 (177)
T ss_pred ccc-cCcHHHhccccHHHHHhcCCcccccCccccccc
Confidence 997 677664443444555678888887666554443
No 498
>PRK09902 hypothetical protein; Provisional
Probab=98.40 E-value=5.4e-06 Score=83.03 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=103.6
Q ss_pred eeeccceEEEEEEECCCCceEEEEEecccc------ccchHHHHHHHHHHHhcC--CCCceeEeeeeeecccCCCCceEE
Q 001858 711 IGQGSFGFVYRGNLGEDLLPVAVKVINLKQ------KGSIKSFVAECEALKNIR--HRNLIKIITVCSSIDFKGDDFKAL 782 (1003)
Q Consensus 711 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~l 782 (1003)
-|+||.+.|+.....+. .+=+|.-...- +--...|.+|...++.+. .-.+.++. ++........-.-++
T Consensus 26 ~~rgG~SgV~r~~~~g~--~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK--KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEeCCc--EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 36689999999877544 57777754111 223578999999999984 33355555 333222223344579
Q ss_pred eeecccC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccCCCCceEeCCCCC--eEEccccc
Q 001858 783 VYDYMQS-GSLEDWLQQSNDQVDGNLNLIQRLNISIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV--AHVSDFGL 859 (1003)
Q Consensus 783 v~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~--~kl~DfG~ 859 (1003)
|+|.+++ .+|.+++.... ..+.+..+...+..+++.+++-||.. |+.|+|+.+.||+++.++. ++++||.-
T Consensus 103 VTe~L~g~~~L~~~l~~~~---~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHA---VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEEeCCCCccHHHHHhcCC---cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 9997764 48999986532 23457777889999999999999999 9999999999999987676 99999976
Q ss_pred ccc
Q 001858 860 AKF 862 (1003)
Q Consensus 860 a~~ 862 (1003)
++.
T Consensus 177 ~r~ 179 (216)
T PRK09902 177 SRR 179 (216)
T ss_pred cch
Confidence 653
No 499
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=1.2e-07 Score=96.22 Aligned_cols=57 Identities=23% Similarity=0.328 Sum_probs=27.6
Q ss_pred cCCchhHHhhcccccCCCCCcccccCccccceeeccCcccccCc-CccccccccchhhhccCcccc
Q 001858 242 NISSLEQISLLTNRFEGRLPLNIGFNLPKLKILIVGQNNLTGSI-PQSFSNASNLVILNLSGNHFS 306 (1003)
Q Consensus 242 ~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~ 306 (1003)
..+.++.+.+..|++.. .+|++..+.+..|.+...- .+.+..++.+-.|+|+.|+|.
T Consensus 180 ~~~c~~~~w~~~~~l~r--------~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~id 237 (418)
T KOG2982|consen 180 QLPCLEQLWLNKNKLSR--------IFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNID 237 (418)
T ss_pred cCCcHHHHHHHHHhHHh--------hcccchheeeecCcccchhhcccCCCCCcchhhhhcccccc
Confidence 34455666666666542 3355555666666554221 123333444444444444443
No 500
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=8.4e-08 Score=97.28 Aligned_cols=209 Identities=21% Similarity=0.235 Sum_probs=129.5
Q ss_pred cccccccccccccCccc-ccc-cCCCCccEEEcccccccc--cCCCccccccccceeccccccccccccccccCCCccce
Q 001858 372 TITIIAMGLNQISGTIP-LEI-RNLANIYALGLEYNQLTG--TIPYTIGELINLQALDFSANNLHGIIPDSIGNLSTLNS 447 (1003)
Q Consensus 372 ~L~~L~L~~n~l~~~~p-~~~-~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 447 (1003)
.++.|.+.++.|..+.- ..| ...+.++++||.+|+|+. .+...+.++|.|++|+|+.|++...+...=..+.+|+.
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 34444444554432211 112 234567777777777762 33344556777777777777776433222145667788
Q ss_pred eeccccccc-ccCCccccCCCCCCeeeccCccccCCCchhhhhhccccccccCCCCcccccccc--cccccccccccccc
Q 001858 448 LWLGFNNLQ-GNIPSSLGNCKNLMLLNVSKNKLTGTLPPQILEITTLSSLLDLSSNLISGSIPL--VVGNLKNLIQLDIS 524 (1003)
Q Consensus 448 L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~L~~N~l~~~~p~--~~~~l~~L~~L~Ls 524 (1003)
|-|.+..+. ......+..++.+++|.+|.|.+. .+++..|-+....|. .+..++.+..++++
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r---------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~ 190 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR---------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWLN 190 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhh---------------hhccccccccccchhhhhhhcCCcHHHHHHH
Confidence 877777765 233445667777888888888654 123444443322211 13345566777777
Q ss_pred ccccccccCccccCcccccEEEecCCCccccC-CcccccccCcCeeeccCceeccCC-cccccCCCccceEecCCCcccc
Q 001858 525 RNRFSGEIPTTLSSCTSLEYLKMQDNSFRGSI-PSSLISLKSIEVLDLSCNNLSGQI-PEYLEDLSFLEYLNLSYNDFEG 602 (1003)
Q Consensus 525 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~l~~N~l~~ 602 (1003)
-|++... ++++..+-+..|.+...- -..+..++.+..|+|+.|+|..-. -+.+..++.|..|.+++|++..
T Consensus 191 ~~~l~r~-------Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 191 KNKLSRI-------FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred HHhHHhh-------cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 7887643 346777788888776432 245566788889999999987532 2678889999999999998864
Done!