Your job contains 1 sequence.
>001859
MAATMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQ
HQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSK
AAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHG
TLSYCINVSHSFVNRREYRREVLRLLVKVYQKLPSPDYLSICQCLMFLDEPEGVVSILEK
LLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQND
SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS
DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA
GLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDS
LRSTNVEVIQHGACLGLGLAALGTADEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA
SEKAGEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYA
LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYN
PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSR
VGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSV
FSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSA
VKLPAAVLSTSAKAKARAKKEAEQKEKEKATAEKTDLSSAGKGKSSNEKDGDSMQVDAPP
EKKAEPEPSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEPEVLS
LTDAPSSTQSPAGGGSTTGQQGSASAMAVDEEPQPPAPFEYTS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001859
(1003 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2046402 - symbol:AT2G32730 species:3702 "Arabi... 3896 0. 1
TAIR|locus:2010672 - symbol:AT1G04810 species:3702 "Arabi... 3847 0. 1
ZFIN|ZDB-GENE-040426-810 - symbol:psmd1 "proteasome (pros... 2146 6.9e-228 2
UNIPROTKB|G3V8B6 - symbol:Psmd1 "26S proteasome non-ATPas... 2074 5.1e-223 2
UNIPROTKB|E1C5P3 - symbol:PSMD1 "26S proteasome non-ATPas... 2075 6.5e-223 2
MGI|MGI:1917497 - symbol:Psmd1 "proteasome (prosome, macr... 2069 1.3e-222 2
UNIPROTKB|A7MBA2 - symbol:PSMD1 "Uncharacterized protein"... 2064 1.7e-222 2
UNIPROTKB|F1NUT6 - symbol:PSMD1 "26S proteasome non-ATPas... 2069 2.8e-222 2
RGD|621669 - symbol:Psmd1 "proteasome (prosome, macropain... 2067 2.8e-222 2
UNIPROTKB|Q99460 - symbol:PSMD1 "26S proteasome non-ATPas... 2067 5.8e-222 2
UNIPROTKB|Q5R5S4 - symbol:PSMD1 "26S proteasome non-ATPas... 2066 7.4e-222 2
UNIPROTKB|F1LRN6 - symbol:Psmd1 "26S proteasome non-ATPas... 2062 9.5e-222 2
UNIPROTKB|Q5F418 - symbol:PSMD1 "26S proteasome non-ATPas... 2063 1.2e-221 2
UNIPROTKB|F1PX57 - symbol:PSMD1 "Uncharacterized protein"... 2043 2.0e-219 2
FB|FBgn0028692 - symbol:Rpn2 "Regulatory particle non-ATP... 2025 2.7e-218 3
DICTYBASE|DDB_G0287953 - symbol:psmD1 "26S proteasome reg... 1468 4.7e-207 2
ASPGD|ASPL0000047917 - symbol:AN1700 species:162425 "Emer... 1643 1.9e-190 2
CGD|CAL0003585 - symbol:RPN2 species:5476 "Candida albica... 1352 4.5e-178 2
UNIPROTKB|J9P4R4 - symbol:PSMD1 "Uncharacterized protein"... 1578 4.5e-162 1
SGD|S000001337 - symbol:RPN2 "Subunit of the 26S proteaso... 1186 8.5e-162 2
GENEDB_PFALCIPARUM|PF14_0632 - symbol:PF14_0632 "26S prot... 933 6.0e-153 4
UNIPROTKB|Q8IKH3 - symbol:PF14_0632 "26S proteasome subun... 933 6.0e-153 4
POMBASE|SPBC17D11.07c - symbol:rpn2 "19S proteasome regul... 1477 2.3e-151 1
WB|WBGene00004459 - symbol:rpn-2 species:6239 "Caenorhabd... 964 6.0e-116 2
UNIPROTKB|Q18115 - symbol:rpn-2 "26S proteasome non-ATPas... 964 6.0e-116 2
POMBASE|SPBP19A11.03c - symbol:mts4 "19S proteasome regul... 197 7.0e-12 2
ASPGD|ASPL0000062698 - symbol:AN10020 species:162425 "Eme... 178 3.3e-11 3
TAIR|locus:2121358 - symbol:RPN1B "26S proteasome regulat... 168 3.4e-10 4
TAIR|locus:2046016 - symbol:RPN1A "26S proteasome regulat... 167 6.7e-10 4
DICTYBASE|DDB_G0293752 - symbol:psmD2 "26S proteasome non... 160 2.6e-07 2
FB|FBgn0028695 - symbol:Rpn1 "Regulatory particle non-ATP... 90 2.5e-06 5
WB|WBGene00004458 - symbol:rpn-1 species:6239 "Caenorhabd... 131 3.0e-06 3
CGD|CAL0006334 - symbol:RPN1 species:5476 "Candida albica... 130 7.8e-05 3
>TAIR|locus:2046402 [details] [associations]
symbol:AT2G32730 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010498 "proteasomal
protein catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC003974 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 EMBL:AY099861
IPI:IPI00538191 PIR:T00795 RefSeq:NP_180832.1 UniGene:At.19478
ProteinModelPortal:O48844 SMR:O48844 IntAct:O48844 STRING:O48844
PaxDb:O48844 PRIDE:O48844 ProMEX:O48844 EnsemblPlants:AT2G32730.1
GeneID:817833 KEGG:ath:AT2G32730 TAIR:At2g32730 InParanoid:O48844
OMA:LLCNFWG PhylomeDB:O48844 ProtClustDB:CLSN2681948
ArrayExpress:O48844 Genevestigator:O48844 Uniprot:O48844
Length = 1004
Score = 3896 (1376.5 bits), Expect = 0., P = 0.
Identities = 788/1009 (78%), Positives = 836/1009 (82%)
Query: 1 MAATMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQ 60
MA MVSSAGGLLAMLNE HP LKLHALSNLN+ VDQFWPEISTSVPIIESLYEDEEFD
Sbjct: 1 MATPMVSSAGGLLAMLNEPHPVLKLHALSNLNNLVDQFWPEISTSVPIIESLYEDEEFDL 60
Query: 61 HQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSK 120
HQRQLAALLVSKVFYYLGELNDSLSYALGAG LFDVSEDSDYVHTLLAKAIDEYAS++SK
Sbjct: 61 HQRQLAALLVSKVFYYLGELNDSLSYALGAGPLFDVSEDSDYVHTLLAKAIDEYASLRSK 120
Query: 121 AAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHG 180
A ESN E ++DPRLEAIVERML KCI+DGKYQQAMGIAIECRRLDKLEEAI +SDNV G
Sbjct: 121 AVESN-EMVDIDPRLEAIVERMLGKCISDGKYQQAMGIAIECRRLDKLEEAIIKSDNVQG 179
Query: 181 TLSYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEK 240
TLSYCINVSHSFVN QKLPSPDYLSICQCLMFLDEP+GV SILEK
Sbjct: 180 TLSYCINVSHSFVNRREYRHEVLSLLVKVYQKLPSPDYLSICQCLMFLDEPQGVASILEK 239
Query: 241 LLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQND 300
LLRSENKDDALLA QIAFDLVENEHQAFLL+VRD LP PKT+ ++ Q + + A N+
Sbjct: 240 LLRSENKDDALLALQIAFDLVENEHQAFLLSVRDRLPAPKTRAVEATQ--AVETTIAPNE 297
Query: 301 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
+ + DVQM + TPA + V + DP + YAERL KIKGILSGETSIQLTLQFLYSHNKS
Sbjct: 298 NPSG-DVQMADETPAQTI-VHETDPVDATYAERLTKIKGILSGETSIQLTLQFLYSHNKS 355
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA
Sbjct: 356 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 415
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
GLGVIHRGHLQQGRSLMAP YALGLIHANHGEGIKQFLRDS
Sbjct: 416 GLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDS 475
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
LRSTNVEVIQH DE+IYDD+K+VLYTDSAVAGEAAGISMGLL+VGTA
Sbjct: 476 LRSTNVEVIQHGACLGLGLSALGTADEEIYDDVKSVLYTDSAVAGEAAGISMGLLLVGTA 535
Query: 541 SEKAGEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYA 600
+EKA EML YAHETQHEKIIRGLALGIALTVYGREE ADTLIEQMTRDQDPI+RYGGMYA
Sbjct: 536 TEKASEMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYA 595
Query: 601 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYN 660
LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYS+PEQTPRIVSLLSESYN
Sbjct: 596 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYN 655
Query: 661 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSR 720
PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQI+EA+DSR
Sbjct: 656 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSR 715
Query: 721 VGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSV 780
VG FRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDK+TAV+GL+V
Sbjct: 716 VGVFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLAV 775
Query: 781 FSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSA 840
FSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFEYPKPTTVPT +A
Sbjct: 776 FSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVPTANTA 835
Query: 841 VKLPAAVLSTSXXXXXXXXXXXXXXXXXXXXXXX---TDLSSAGKGKSSNEKDGDSMQVD 897
VKLP AVLSTS + S +GKGK+S EK+GDSMQVD
Sbjct: 836 VKLPTAVLSTSVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKGKASTEKEGDSMQVD 895
Query: 898 XXXXXXXXXXX---SFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPN 954
+FEIL+NPARVVPAQEK+IK L+DSRYVPVK APSGFVLL+DLR +
Sbjct: 896 SPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKLAPSGFVLLKDLREH 955
Query: 955 EPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPPAPFEYTS 1003
EPEVLSLTD MAVD+EPQPP FEY S
Sbjct: 956 EPEVLSLTDAPTSTASPATGTAAAAQGTPASAMAVDDEPQPPQAFEYAS 1004
>TAIR|locus:2010672 [details] [associations]
symbol:AT1G04810 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010332 "response to
gamma radiation" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
EMBL:CP002684 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
EMBL:AC004809 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 ProtClustDB:CLSN2681948 EMBL:BT004007 IPI:IPI00520284
PIR:C86181 RefSeq:NP_171973.1 UniGene:At.19689
ProteinModelPortal:Q9MAT0 SMR:Q9MAT0 IntAct:Q9MAT0 STRING:Q9MAT0
PRIDE:Q9MAT0 ProMEX:Q9MAT0 EnsemblPlants:AT1G04810.1 GeneID:839409
KEGG:ath:AT1G04810 TAIR:At1g04810 InParanoid:Q9MAT0
PhylomeDB:Q9MAT0 ArrayExpress:Q9MAT0 Genevestigator:Q9MAT0
Uniprot:Q9MAT0
Length = 1001
Score = 3847 (1359.3 bits), Expect = 0., P = 0.
Identities = 777/1010 (76%), Positives = 835/1010 (82%)
Query: 1 MAATMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQ 60
MAA MVSSAGGLLAMLNE HPSLKLHALS L VDQFWPEISTSVPIIESLYEDEEFDQ
Sbjct: 1 MAAAMVSSAGGLLAMLNEPHPSLKLHALSYLIRLVDQFWPEISTSVPIIESLYEDEEFDQ 60
Query: 61 HQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSK 120
HQRQLAALL SKVFYYLGELNDSLSYALGAGSLFDVSEDSDY+HTLL+KAIDEYA ++SK
Sbjct: 61 HQRQLAALLASKVFYYLGELNDSLSYALGAGSLFDVSEDSDYIHTLLSKAIDEYAILRSK 120
Query: 121 AAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHG 180
A ES+ E +DPRL AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAI +S+NV G
Sbjct: 121 AVESS-EVVEIDPRLVAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAIIKSENVQG 179
Query: 181 TLSYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEK 240
TLSYCINVSHSFVN QKL SPDYLSICQCLMFLDEP+GV SILEK
Sbjct: 180 TLSYCINVSHSFVNQREYRHEVLRLLVNVYQKLASPDYLSICQCLMFLDEPQGVASILEK 239
Query: 241 LLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQND 300
LLRSENKDDALLAFQI+FDLV+NEHQAFL++VRD LP PKT+P++ +Q + + +AQN+
Sbjct: 240 LLRSENKDDALLAFQISFDLVQNEHQAFLMSVRDRLPAPKTRPVEAIQ--AVETSTAQNE 297
Query: 301 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
+ TA DVQM + TP+ + V + DP + +YAERL K KGILSGETSIQLTLQFLYSHNKS
Sbjct: 298 N-TAGDVQMADETPSQTI-VHETDPVDAVYAERLTKAKGILSGETSIQLTLQFLYSHNKS 355
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA
Sbjct: 356 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 415
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
GLGVIHRGHLQQGRSLMAP YALGLIHANHGEGIKQFLRDS
Sbjct: 416 GLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDS 475
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
LRST+VEVIQH DEDIYDDIK+VLYTDSAVAGEAAGISMGLL+VGTA
Sbjct: 476 LRSTSVEVIQHGACLGLGLAALGTADEDIYDDIKSVLYTDSAVAGEAAGISMGLLLVGTA 535
Query: 541 SEKAGEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYA 600
++KA EML YAHETQHEKIIRGLALGIALTVYGREE ADTLIEQMTRDQDPI+RYGGMYA
Sbjct: 536 TDKASEMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYA 595
Query: 601 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYN 660
LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYS+PEQTPRIVSLLSESYN
Sbjct: 596 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYN 655
Query: 661 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSR 720
PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQI+EA+DSR
Sbjct: 656 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSR 715
Query: 721 VGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSV 780
VG FRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDK+TAV+GL+V
Sbjct: 716 VGAFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLTV 775
Query: 781 FSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSA 840
FSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFEYPKPTTV T +A
Sbjct: 776 FSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVATANTA 835
Query: 841 VKLPAAVLSTSXXXXXXXXXXXXXXXXXXXXXXXTDLSSAGKGKS-SNEKDGDSMQVDXX 899
KLP AVLSTS + AGK + S+EK+ +SMQVD
Sbjct: 836 AKLPTAVLSTSAKAKAKAKKEAEQKAKAENSG-----NEAGKANAASDEKEAESMQVDST 890
Query: 900 XXXXXXXX---XSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEP 956
+FEIL+NPARVVP+QEK+IK +EDSRYVP+K APSGFVLLRDLRP+EP
Sbjct: 891 ATTVEKKVEPEATFEILVNPARVVPSQEKYIKLMEDSRYVPMKLAPSGFVLLRDLRPHEP 950
Query: 957 EVLSLTDXXXXXXX---XXXXXXXXXXXXXXXXMAVDEEPQPPAPFEYTS 1003
EVLSLTD MA+D+EPQPP FEY S
Sbjct: 951 EVLSLTDAPTSTASPAVGAEAAGQAQQAATTSAMAIDDEPQPPQAFEYAS 1000
>ZFIN|ZDB-GENE-040426-810 [details] [associations]
symbol:psmd1 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 1" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
ZFIN:ZDB-GENE-040426-810 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074915 Pfam:PF01851
EMBL:BX571973 EMBL:CABZ01044354 IPI:IPI00506005
Ensembl:ENSDART00000144100 ArrayExpress:F1QY43 Uniprot:F1QY43
Length = 959
Score = 2146 (760.5 bits), Expect = 6.9e-228, Sum P(2) = 6.9e-228
Identities = 450/956 (47%), Positives = 613/956 (64%)
Query: 11 GLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLV 70
G++++L+E P LK AL LNS V+ FW EIS SV IE LYEDE F R+ AAL+
Sbjct: 2 GIISLLDEDEPQLKEFALHKLNSVVNDFWAEISESVGKIEVLYEDETF--RSREFAALVA 59
Query: 71 SKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE--SNDEA 128
SKVFY+LG ++SLSYALGAG LF+V++DS+YV T++AK ID Y + + AE +E
Sbjct: 60 SKVFYHLGAFDESLSYALGAGDLFNVNDDSEYVETIIAKCIDHYTKQRVENAELPEEEEK 119
Query: 129 ANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYCINV 188
++DPRLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S+++ G L+Y + +
Sbjct: 120 KDIDPRLEGIVNKMFQRCLGDHKYKQAIGIALETRRLDIFEKTILESNDIGGLLAYSLKI 179
Query: 189 SHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSENKD 248
S + L PD++++CQCL+FLD+P+ V ILEKL++ +N
Sbjct: 180 CMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDN-- 237
Query: 249 DALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQNDSSTAE 305
L+A+QI FDL E+ Q FL +V +L T P+ V PGS + P+ DS + E
Sbjct: 238 -LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIPAV-PGSTNTGTVPTPDKDSDSME 294
Query: 306 DVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLIL 365
+PA ++PK+ + IK ILSGE +I+L LQFL +N +DL+IL
Sbjct: 295 TEDKAGSSPAGKTADAKDEPKD----QNSKMIK-ILSGEMAIELHLQFLIRNNNTDLMIL 349
Query: 366 KTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVI 425
K K +V RNSVCH+AT+ AN+ MH GTT D FLRENL+WL+RATNWAKF+ATA LGVI
Sbjct: 350 KNTKDAV--RNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVI 407
Query: 426 HRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTN 485
H+GH ++ LMA YALGLIHANHG I +L L++ +
Sbjct: 408 HKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNAS 465
Query: 486 VEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAG 545
++++H +D+YD +K+ LY D AV GEAAG+++GL+M+G+ S +A
Sbjct: 466 NDIVRHGGALGLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAI 525
Query: 546 E-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALA 604
E M+ YA ETQHEKI+RGLA+GIA+ +YGR EEAD LIE + RD+DPILR GMY +A+A
Sbjct: 526 EDMVGYAQETQHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMA 585
Query: 605 YSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVR 664
Y G+ NNKAIR+LLH AVSDV+DDVRR AV ++GF+++ PEQ P +VSLLSESYNPHVR
Sbjct: 586 YCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESIGFIMFRTPEQCPSVVSLLSESYNPHVR 645
Query: 665 YGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTF 724
YGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E +V F
Sbjct: 646 YGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEVTCPKVNQF 705
Query: 725 RRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQF 784
R+ K+I DKH+D M+K GAILA G+LDAGGRNVTI L S+T H + +VVGL VF+QF
Sbjct: 706 RQLYSKVINDKHDDVMAKFGAILAQGVLDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQF 765
Query: 785 WYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLP 844
W+W+PL +F+SL+F+PTA+IGLN DLK+P+ ++ S+ KPS F YP P VP K+
Sbjct: 766 WFWFPLSHFLSLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPPLEVPKEKEKEKVS 825
Query: 845 AAVLSTSXXXXXXXXXXXXXXXXXXXXXXXTDLSSAGKGKSSNEKDGDSMQVDXXXXXXX 904
AVLS + + A K K EK+ + +
Sbjct: 826 TAVLSITAKAKKKEKEKKEKEEEKMEVETQAE---AEKEKKDEEKEKEKEK-------KK 875
Query: 905 XXXXSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSG-FVLLRDLRPNEPEVL 959
+F+++ NPAR +PAQ K + + RY P K +G ++L+D E E++
Sbjct: 876 EPEPNFQMMENPARALPAQLKVLTMPDSCRYQPFKPLHTGGIIILKDTSEEEEELV 931
Score = 76 (31.8 bits), Expect = 6.9e-228, Sum P(2) = 6.9e-228
Identities = 24/93 (25%), Positives = 40/93 (43%)
Query: 909 SFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXX 968
+F+++ NPAR +PAQ K + + RY P K +G +++ L+ E L +
Sbjct: 880 NFQMMENPARALPAQLKVLTMPDSCRYQPFKPLHTGGIII--LKDTSEEEEELVEPVSAH 937
Query: 969 XXXXXXXXXXXXXXXXXXMAVDEEPQPPAPFEY 1001
++EP+ P PFEY
Sbjct: 938 GPKIEEE--------------EQEPEAPEPFEY 956
>UNIPROTKB|G3V8B6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 GeneTree:ENSGT00550000074915
OMA:CVENAEL Pfam:PF01851 UniGene:Rn.2891 EMBL:CH474004
Ensembl:ENSRNOT00000024306 Uniprot:G3V8B6
Length = 953
Score = 2074 (735.1 bits), Expect = 5.1e-223, Sum P(2) = 5.1e-223
Identities = 425/850 (50%), Positives = 572/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 300
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P + D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGPEKD 293
Query: 301 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
S + E + G A +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTAGAVAGKTPDASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 719
NPHVRYGAA+A+G+ CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 720 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 779
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 780 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 839
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 840 AVKLPAAVLS 849
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 102 (41.0 bits), Expect = 5.1e-223, Sum P(2) = 5.1e-223
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRYQ 901
Query: 937 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 996
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 997 APFEY 1001
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|E1C5P3 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AADN02020638 IPI:IPI00579067 Ensembl:ENSGALT00000012418
ArrayExpress:E1C5P3 Uniprot:E1C5P3
Length = 958
Score = 2075 (735.5 bits), Expect = 6.5e-223, Sum P(2) = 6.5e-223
Identities = 427/853 (50%), Positives = 578/853 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + AE
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAEL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E VD RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 300
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P ++ D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 301 SSTAEDVQMNEGT---PASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSH 357
S E + T ++ + V++ +PK+ +++K+ ILSGE +I+L LQFL +
Sbjct: 294 SDAMEAEEKPGSTCVGKSAEIYVKNPEPKD-----QISKMIKILSGEMAIELHLQFLIRN 348
Query: 358 NKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFS 417
N +DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+
Sbjct: 349 NNTDLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFT 406
Query: 418 ATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFL 477
ATA LGVIH+GH ++ LMA YALGLIHANHG I +L
Sbjct: 407 ATASLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYL 464
Query: 478 RDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMV 537
+ L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+
Sbjct: 465 LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVML 524
Query: 538 GTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYG 596
G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR
Sbjct: 525 GSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRS 584
Query: 597 GMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLS 656
GMY +A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLS
Sbjct: 585 GMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLS 644
Query: 657 ESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEA 716
ESYNPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 ESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEI 704
Query: 717 NDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVV 776
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VV
Sbjct: 705 TCPKVSQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVV 764
Query: 777 GLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPT 836
G+ VF+QFW+W+PL +F+SL+F+PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 GVLVFTQFWFWFPLSHFLSLAFTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPPPLEVPK 824
Query: 837 TTSAVKLPAAVLS 849
K+ AVLS
Sbjct: 825 EKEKEKVSTAVLS 837
Score = 100 (40.3 bits), Expect = 6.5e-223, Sum P(2) = 6.5e-223
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 847 KEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTESCRYQ 906
Query: 937 PVKSAP-SGFVLLRDLRPNEPEVL 959
P K G ++L+D + E++
Sbjct: 907 PFKPLSIGGIIILKDTSEDMEELV 930
>MGI|MGI:1917497 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
MGI:MGI:1917497 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 GeneTree:ENSGT00550000074915
HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AK153386 EMBL:AK159123
EMBL:BC138526 EMBL:BC138527 IPI:IPI00267295 RefSeq:NP_081633.1
UniGene:Mm.280013 ProteinModelPortal:Q3TXS7 SMR:Q3TXS7
IntAct:Q3TXS7 STRING:Q3TXS7 PhosphoSite:Q3TXS7 PaxDb:Q3TXS7
PRIDE:Q3TXS7 Ensembl:ENSMUST00000027432 GeneID:70247 KEGG:mmu:70247
UCSC:uc007buy.1 InParanoid:B2RRP8 NextBio:331246 Bgee:Q3TXS7
Genevestigator:Q3TXS7 Uniprot:Q3TXS7
Length = 953
Score = 2069 (733.4 bits), Expect = 1.3e-222, Sum P(2) = 1.3e-222
Identities = 425/850 (50%), Positives = 571/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 300
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P ++ D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 301 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
S E + A +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDPMETEEKTASAVAGKTPDASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 719
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 720 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 779
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 780 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 839
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 840 AVKLPAAVLS 849
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 103 (41.3 bits), Expect = 1.3e-222, Sum P(2) = 1.3e-222
Identities = 34/125 (27%), Positives = 52/125 (41%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRYQ 901
Query: 937 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 996
P K G +++ L+ +V L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDVEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 997 APFEY 1001
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|A7MBA2 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543
OrthoDB:EOG4X97GG EMBL:DAAA02006191 EMBL:BC151445 IPI:IPI00714855
RefSeq:NP_001094547.1 UniGene:Bt.27989 STRING:A7MBA2
Ensembl:ENSBTAT00000006754 GeneID:511803 KEGG:bta:511803
InParanoid:A7MBA2 NextBio:20870109 Uniprot:A7MBA2
Length = 953
Score = 2064 (731.6 bits), Expect = 1.7e-222, Sum P(2) = 1.7e-222
Identities = 425/850 (50%), Positives = 573/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSST 303
+N L+A+QI FDL E+ Q FL +V +L T PL +V PGS + +
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PLASV-PGSTNTGTVPGSERE 293
Query: 304 AEDVQMNEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
++ ++ E T + V E +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTGSVLVGKTPEVSPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 719
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 720 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 779
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 780 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 839
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 840 AVKLPAAVLS 849
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 107 (42.7 bits), Expect = 1.7e-222, Sum P(2) = 1.7e-222
Identities = 34/125 (27%), Positives = 53/125 (42%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + LE RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMLETCRYQ 901
Query: 937 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 996
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 997 APFEY 1001
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|F1NUT6 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 IPI:IPI00598268
EMBL:AADN02020638 Ensembl:ENSGALT00000012419 ArrayExpress:F1NUT6
Uniprot:F1NUT6
Length = 955
Score = 2069 (733.4 bits), Expect = 2.8e-222, Sum P(2) = 2.8e-222
Identities = 426/850 (50%), Positives = 573/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + AE
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAEL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E VD RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 300
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P ++ D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 301 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
S E + T + +PK+ +++K+ ILSGE +I+L LQFL +N +
Sbjct: 294 SDAMEAEEKPGSTCVGKSAEINPEPKD-----QISKMIKILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 719
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 720 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 779
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVSQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 780 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 839
VF+QFW+W+PL +F+SL+F+PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAFTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPPPLEVPKEKE 824
Query: 840 AVKLPAAVLS 849
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 100 (40.3 bits), Expect = 2.8e-222, Sum P(2) = 2.8e-222
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 844 KEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTESCRYQ 903
Query: 937 PVKSAP-SGFVLLRDLRPNEPEVL 959
P K G ++L+D + E++
Sbjct: 904 PFKPLSIGGIIILKDTSEDMEELV 927
>RGD|621669 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AJ006340 IPI:IPI00212512
RefSeq:NP_114184.1 UniGene:Rn.2891 ProteinModelPortal:O88761
IntAct:O88761 STRING:O88761 PhosphoSite:O88761 PRIDE:O88761
GeneID:83806 KEGG:rno:83806 UCSC:RGD:621669 InParanoid:O88761
NextBio:616403 ArrayExpress:O88761 Genevestigator:O88761
GermOnline:ENSRNOG00000017730 Uniprot:O88761
Length = 953
Score = 2067 (732.7 bits), Expect = 2.8e-222, Sum P(2) = 2.8e-222
Identities = 424/850 (49%), Positives = 571/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+ + V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDTQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 300
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P + D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGPEKD 293
Query: 301 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
S + E + G A +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTAGAVAGKTPDASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 719
NPHVRYGAA+A+G+ CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 720 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 779
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 780 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 839
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCIIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 840 AVKLPAAVLS 849
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 102 (41.0 bits), Expect = 2.8e-222, Sum P(2) = 2.8e-222
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRYQ 901
Query: 937 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 996
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 997 APFEY 1001
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|Q99460 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:AC009407 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 eggNOG:COG5116 KO:K03032 OMA:CVENAEL Pfam:PF01851
CTD:5707 HOVERGEN:HBG007543 EMBL:D44466 EMBL:BC001053 EMBL:BC014013
EMBL:BC039845 EMBL:BC047897 EMBL:BC064398 EMBL:BC073833
EMBL:BC094720 EMBL:BC112344 EMBL:BC114434 IPI:IPI00299608
IPI:IPI00456695 RefSeq:NP_001177966.1 RefSeq:NP_002798.2
UniGene:Hs.3887 ProteinModelPortal:Q99460 SMR:Q99460 DIP:DIP-27548N
IntAct:Q99460 MINT:MINT-1160606 STRING:Q99460 PhosphoSite:Q99460
DMDM:51704332 PaxDb:Q99460 PRIDE:Q99460 Ensembl:ENST00000308696
Ensembl:ENST00000373635 Ensembl:ENST00000409643 GeneID:5707
KEGG:hsa:5707 UCSC:uc002vrm.2 UCSC:uc002vrn.2 GeneCards:GC02P231921
HGNC:HGNC:9554 HPA:CAB021092 neXtProt:NX_Q99460 PharmGKB:PA33899
InParanoid:Q99460 OrthoDB:EOG4X97GG PhylomeDB:Q99460
ChEMBL:CHEMBL1934 ChiTaRS:PSMD1 GenomeRNAi:5707 NextBio:22174
ArrayExpress:Q99460 Bgee:Q99460 CleanEx:HS_PSMD1
Genevestigator:Q99460 GermOnline:ENSG00000173692 Uniprot:Q99460
Length = 953
Score = 2067 (732.7 bits), Expect = 5.8e-222, Sum P(2) = 5.8e-222
Identities = 424/850 (49%), Positives = 574/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSST 303
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + +
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 304 AEDVQMNEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
++ ++ E T ++ V E +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTSSAFVGKTPEASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 719
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 720 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 779
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 780 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 839
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 840 AVKLPAAVLS 849
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 99 (39.9 bits), Expect = 5.8e-222, Sum P(2) = 5.8e-222
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQ 901
Query: 937 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 996
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 997 APFEY 1001
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|Q5R5S4 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 GeneTree:ENSGT00550000074915 KO:K03032 OMA:CVENAEL
Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543 OrthoDB:EOG4X97GG
EMBL:CR860782 RefSeq:NP_001126695.1 UniGene:Pab.18654
ProteinModelPortal:Q5R5S4 PRIDE:Q5R5S4 Ensembl:ENSPPYT00000015422
GeneID:100173695 KEGG:pon:100173695 InParanoid:Q5R5S4
Uniprot:Q5R5S4
Length = 953
Score = 2066 (732.3 bits), Expect = 7.4e-222, Sum P(2) = 7.4e-222
Identities = 424/850 (49%), Positives = 574/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSST 303
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + +
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 304 AEDVQMNEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
++ ++ E T ++ V E +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTGSAFVGKTPEASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 719
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 720 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 779
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 780 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 839
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 840 AVKLPAAVLS 849
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 99 (39.9 bits), Expect = 7.4e-222, Sum P(2) = 7.4e-222
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQ 901
Query: 937 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 996
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 997 APFEY 1001
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|F1LRN6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 IPI:IPI00949424
PRIDE:F1LRN6 Ensembl:ENSRNOT00000066613 ArrayExpress:F1LRN6
Uniprot:F1LRN6
Length = 952
Score = 2062 (730.9 bits), Expect = 9.5e-222, Sum P(2) = 9.5e-222
Identities = 423/849 (49%), Positives = 570/849 (67%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQL 65
++S G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 LTSQAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQF 58
Query: 66 AALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESN 125
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 AALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLP 118
Query: 126 D-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSY 184
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+Y
Sbjct: 119 EGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAY 178
Query: 185 CINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRS 244
+ + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 SLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE 238
Query: 245 ENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQNDS 301
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P + DS
Sbjct: 239 DN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGPEKDS 293
Query: 302 STAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSD 361
+ E + G A +PK+ + L IK ILSGE +I+L LQFL +N +D
Sbjct: 294 DSMETEEKTAGAVAGKTPDASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNTD 348
Query: 362 LLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAG 421
L+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 LMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATAS 406
Query: 422 LGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSL 481
LGVIH+GH ++ LMA YALGLIHANHG I +L + L
Sbjct: 407 LGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQL 464
Query: 482 RSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTAS 541
++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ +
Sbjct: 465 KNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKN 524
Query: 542 EKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYA 600
+A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 AQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYT 584
Query: 601 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYN 660
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESYN
Sbjct: 585 VAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYN 644
Query: 661 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSR 720
PHVRYGAA+A+G+ CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E +
Sbjct: 645 PHVRYGAAMALGVCCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPK 704
Query: 721 VGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSV 780
V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+ V
Sbjct: 705 VNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLV 764
Query: 781 FSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSA 840
F+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 FTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEK 824
Query: 841 VKLPAAVLS 849
K+ AVLS
Sbjct: 825 EKVSTAVLS 833
Score = 102 (41.0 bits), Expect = 9.5e-222, Sum P(2) = 9.5e-222
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 841 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRYQ 900
Query: 937 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 996
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 901 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 944
Query: 997 APFEY 1001
PFEY
Sbjct: 945 EPFEY 949
>UNIPROTKB|Q5F418 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
Pfam:PF01851 EMBL:AJ851482 IPI:IPI00598268 RefSeq:NP_001012618.1
UniGene:Gga.12538 ProteinModelPortal:Q5F418 STRING:Q5F418
PRIDE:Q5F418 GeneID:424926 KEGG:gga:424926 CTD:5707
HOVERGEN:HBG007543 NextBio:20827189 Uniprot:Q5F418
Length = 955
Score = 2063 (731.3 bits), Expect = 1.2e-221, Sum P(2) = 1.2e-221
Identities = 425/850 (50%), Positives = 572/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + AE
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAEL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E VD RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 300
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P ++ D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 301 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
S E + T + +PK+ +++K+ ILSGE +I+L LQFL +N +
Sbjct: 294 SDAMEAEEKPGSTCVGKSAEINPEPKD-----QISKMIKILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 719
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 720 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 779
+V FR+ K+I DKH+D M+K GAILA GILDAGG NV I L S+T H + +VVG+
Sbjct: 705 KVSQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVIISLQSRTGHTHMPSVVGVL 764
Query: 780 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 839
VF+QFW+W+PL +F+SL+F+PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAFTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPPPLEVPKEKE 824
Query: 840 AVKLPAAVLS 849
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 100 (40.3 bits), Expect = 1.2e-221, Sum P(2) = 1.2e-221
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 844 KEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTESCRYQ 903
Query: 937 PVKSAP-SGFVLLRDLRPNEPEVL 959
P K G ++L+D + E++
Sbjct: 904 PFKPLSIGGIIILKDTSEDMEELV 927
>UNIPROTKB|F1PX57 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AAEX03014431 Ensembl:ENSCAFT00000017372 Uniprot:F1PX57
Length = 953
Score = 2043 (724.2 bits), Expect = 2.0e-219, Sum P(2) = 2.0e-219
Identities = 421/844 (49%), Positives = 567/844 (67%)
Query: 11 GLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLV 70
G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ AAL+
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVA 64
Query: 71 SKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESND-EAA 129
SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+ + E
Sbjct: 65 SKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKK 124
Query: 130 NVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYCINVS 189
+D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+Y + +
Sbjct: 125 PIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLC 184
Query: 190 HSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSENKDD 249
S + L PD++++CQCL+FLD+P+ V ILEKL++ +N
Sbjct: 185 MSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDN--- 241
Query: 250 ALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSSTAEDVQM 309
L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + + +E ++
Sbjct: 242 LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKDSESMET 299
Query: 310 NEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLILK 366
E T + V E +PK+ + L IK ILSGE +I+L LQFL +N +DL+ILK
Sbjct: 300 EEKTGSVLVGKTPEVSPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNTDLMILK 354
Query: 367 TIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIH 426
K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA LGVIH
Sbjct: 355 NTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIH 412
Query: 427 RGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNV 486
+GH ++ LMA YALGLIHANHG I +L + L++ +
Sbjct: 413 KGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASN 470
Query: 487 EVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE 546
++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ + +A E
Sbjct: 471 DIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIE 530
Query: 547 -MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAY 605
M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY +A+AY
Sbjct: 531 DMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAY 590
Query: 606 SGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRY 665
G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESYNPHVRY
Sbjct: 591 CGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRY 650
Query: 666 GAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFR 725
GA +A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E +V FR
Sbjct: 651 GADMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFR 710
Query: 726 RQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFW 785
+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+ VF+QFW
Sbjct: 711 QLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFW 770
Query: 786 YWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPA 845
+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP K+
Sbjct: 771 FWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVST 830
Query: 846 AVLS 849
AVLS
Sbjct: 831 AVLS 834
Score = 99 (39.9 bits), Expect = 2.0e-219, Sum P(2) = 2.0e-219
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 882 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 936
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQ 901
Query: 937 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 996
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 997 APFEY 1001
PFEY
Sbjct: 946 EPFEY 950
>FB|FBgn0028692 [details] [associations]
symbol:Rpn2 "Regulatory particle non-ATPase 2" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 EMBL:AE014297 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006508 GO:GO:0050790
GO:GO:0006974 GO:GO:0004175 GO:GO:0042176 GO:GO:0008540
BRENDA:3.4.25.1 eggNOG:COG5116 GeneTree:ENSGT00550000074915
KO:K03032 OMA:CVENAEL Pfam:PF01851 EMBL:AF145303 EMBL:AF186594
EMBL:AF312231 EMBL:AY069503 EMBL:BT001598 EMBL:BT044102
RefSeq:NP_651677.2 UniGene:Dm.6875 ProteinModelPortal:Q9V3P6
SMR:Q9V3P6 IntAct:Q9V3P6 MINT:MINT-745147 STRING:Q9V3P6
PaxDb:Q9V3P6 PRIDE:Q9V3P6 EnsemblMetazoa:FBtr0085385 GeneID:43449
KEGG:dme:Dmel_CG11888 UCSC:CG11888-RA CTD:6185 FlyBase:FBgn0028692
InParanoid:Q9V3P6 OrthoDB:EOG4BVQ8J PhylomeDB:Q9V3P6
GenomeRNAi:43449 NextBio:834007 Bgee:Q9V3P6 GermOnline:CG11888
Uniprot:Q9V3P6
Length = 1020
Score = 2025 (717.9 bits), Expect = 2.7e-218, Sum P(3) = 2.7e-218
Identities = 413/857 (48%), Positives = 577/857 (67%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQL 65
++SA G++++L+E P LK+ AL L++ VD+FWPEIS S+ IE L+ED F +++ L
Sbjct: 3 LTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENK--L 60
Query: 66 AALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESN 125
A ++ SKVFY+LG D+L+YALGAG LFDV+ ++Y T++AK ID Y + + + E+
Sbjct: 61 AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120
Query: 126 DEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYC 185
EA+ VD RLE IV RM+ +C+ D +++QA+GIA+E RR+D ++AI +SD+V G L+Y
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180
Query: 186 INVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSE 245
NV+ S + + L PDY+++CQCL+FL++P V +L+ L RS
Sbjct: 181 YNVTMSLIQNRGFRNEVLRCLVSLYRDLGVPDYVNMCQCLIFLEDPFAVAEMLDNLTRSS 240
Query: 246 NKDDALLAFQIAFDLVENEHQAFLLNVRDHL----PVPKTQPLQTVQP-G--SNDPPSAQ 298
+ + L+A+QIAFDL E+ Q FL NV HL P+P P T +P G S D ++
Sbjct: 241 VETNNLMAYQIAFDLYESATQEFLGNVLQHLKNTAPIPTALP-STFKPQGTTSEDGAKSE 299
Query: 299 NDSSTAEDVQMNEGTPASNV---NVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLY 355
D S +++ + E TPA + + + E ++ + + K+ ILSGE SI L LQFL
Sbjct: 300 GDKSKSDE-DITEETPADDKVERTIDSLNEVEKLHQKNIEKLISILSGEVSIDLQLQFLI 358
Query: 356 SHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAK 415
N +DL +L+ K++V R S+CH+AT+ ANA MH+GTT D FLR+NLDWL+RATNWAK
Sbjct: 359 RSNHADLQVLRGTKEAV--RVSICHTATVIANAFMHSGTTSDQFLRDNLDWLARATNWAK 416
Query: 416 FSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQ 475
+ATA LGVIHRGH + +LM YALGLIHANHG I
Sbjct: 417 LTATASLGVIHRGHEKDSLALMQ--SYLPKEAGPSSGYSEGGALYALGLIHANHGANIID 474
Query: 476 FLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLL 535
+L L+ E ++H +D+Y+ +K LY D AV GEAAGI+MG++
Sbjct: 475 YLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMV 534
Query: 536 MVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 594
M+G+ + +A E M++YA ETQHEKI+RGLA+GI+LT++ R EEAD L+ ++ D+DP+LR
Sbjct: 535 MLGSKNAQAIEDMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLR 594
Query: 595 YGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSL 654
GMY +A+AY+GT +NKAIR+LLH AVSDV+DDVRR AV A+GF+L+ PEQ P +VSL
Sbjct: 595 RSGMYTIAMAYNGTGSNKAIRKLLHVAVSDVNDDVRRAAVTAIGFILFRSPEQCPSVVSL 654
Query: 655 LSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTS-DVVDFVRQGALIAMAMVMVQI 713
L+ESYNPHVRYGAA+A+GI+CAGTGL EAI+LLEP+ D V+FVRQGALIA AM+++Q
Sbjct: 655 LAESYNPHVRYGAAMALGIACAGTGLREAIALLEPMVKFDPVNFVRQGALIASAMILIQH 714
Query: 714 NEANDSRVGTFRRQL-EKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKI 772
+ + + TF RQL ++I +KHED M+K GAILA GI+DAGGRN T+ L S+T H +
Sbjct: 715 TDQSCPK-STFFRQLYAEVISNKHEDVMAKYGAILAQGIIDAGGRNATLSLQSRTGHTNL 773
Query: 773 TAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPT 832
AVVG+ F+Q+WYW+PL + +SL+F+PT +IGLN DLK+P+ E+ S AKPSL+ YP P
Sbjct: 774 QAVVGMLAFTQYWYWFPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPL 833
Query: 833 TVPTTTSAVKLPAAVLS 849
+ K+ AVLS
Sbjct: 834 EEKKSEEREKVATAVLS 850
Score = 68 (29.0 bits), Expect = 2.7e-218, Sum P(3) = 2.7e-218
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 885 SSNEKDGDSMQVDXXXXXXXXXXXSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSG 944
+S+EKD D + + EIL NPARV+ Q K + ++ Y P+K G
Sbjct: 920 TSSEKDKDK---EKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSYEPLKDVTIG 976
Query: 945 FVLL 948
+++
Sbjct: 977 GIIV 980
Score = 55 (24.4 bits), Expect = 2.7e-218, Sum P(3) = 2.7e-218
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 990 DEEPQPPAPFEY 1001
++EP+PP PFEY
Sbjct: 1006 EKEPEPPEPFEY 1017
>DICTYBASE|DDB_G0287953 [details] [associations]
symbol:psmD1 "26S proteasome regulatory subunit S1"
species:44689 "Dictyostelium discoideum" [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 dictyBase:DDB_G0287953
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GenomeReviews:CM000154_GR GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AAFI02000105 GO:GO:0005838 eggNOG:COG5116 KO:K03032
OMA:CVENAEL Pfam:PF01851 RefSeq:XP_636972.1
ProteinModelPortal:Q54JM5 IntAct:Q54JM5 STRING:Q54JM5 PRIDE:Q54JM5
EnsemblProtists:DDB0232977 GeneID:8626381 KEGG:ddi:DDB_G0287953
ProtClustDB:CLSZ2728851 Uniprot:Q54JM5
Length = 975
Score = 1468 (521.8 bits), Expect = 4.7e-207, Sum P(2) = 4.7e-207
Identities = 318/800 (39%), Positives = 475/800 (59%)
Query: 219 LSICQCLMFLDEPEGVVSILEKLLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPV 278
L I L E +S+++ L+ +N + I L++ + ++ LL + +
Sbjct: 196 LGILVNLHLAQEKPDYLSVVQCLIFLDNHIEVAT---ILLSLIKKDEESLLLAYQIGFDL 252
Query: 279 PKTQPLQTVQPGSNDPPSAQNDSSTAEDVQMNEGTPASN---VNVQDEDPKE---VIYAE 332
+ Q + N P + S+T TPAS+ +++ + K + +
Sbjct: 253 FQNSTQQFLLNVRNRLPPVEKKSTTTTTT-----TPASDSMEIDIDSGNEKSGGSSSFEQ 307
Query: 333 RLNKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEM-RNSVCHSATIYANAIMH 391
RL ++ IL G+ SI + L+FLY + +D+ IL+++K + E+ + ++ +S T++ANA+MH
Sbjct: 308 RLERLHSILIGDVSIGMNLEFLYRNCSTDMHILQSMKTTSELHKGAIFYSGTLFANALMH 367
Query: 392 AGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXX 451
AGTT DTFLR N++WL ++T+W KFSA + LGVI++GH+++ +SL+
Sbjct: 368 AGTTRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLK--TYLPGASVNQT 425
Query: 452 XXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYD 511
YALGLIHA+HGE I +L + L N ++ H +D+Y+
Sbjct: 426 PYSESGSLYALGLIHASHGEEIIDYLVEKLHINNA-ILHHGASLGLGLAAMATGRDDLYE 484
Query: 512 DIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALT 570
D+K+VLY D AV+GEAAG++MGL+M+G+ ++KA EML YAHETQHEK IR L++G+A
Sbjct: 485 DLKSVLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFL 544
Query: 571 VYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVR 630
+YG+EE ADTLIEQM D+DP++RYGGMYA+A AY GT +N A+R+LLH AVSD +D VR
Sbjct: 545 MYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDALRKLLHVAVSDGTDSVR 604
Query: 631 RTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPL 690
R AV +GFVL +PE+ P+ ++LL+ESYNPHVRYGAA A+GI+CAGTG +A+ +L+ L
Sbjct: 605 RAAVTCIGFVLSRQPEKCPKAIALLAESYNPHVRYGAAFALGIACAGTGQRDALEILKSL 664
Query: 691 TSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASG 750
T+D V +V+Q A I+MAMV++Q ++ T R+ I DK ED+MSK GA+LA G
Sbjct: 665 TTDSVGYVKQAAWISMAMVLIQTSKELVPEAETARKLFATCISDKREDSMSKFGAVLAFG 724
Query: 751 ILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDL 810
++DAGGRN TI+L S + H + A+VG++ F QFWYW+P+ +F+ L+ +PT++IGLN +L
Sbjct: 725 VIDAGGRNSTIQLHSPSGHKNMNAIVGIAGFLQFWYWFPMTHFMGLALTPTSIIGLNKNL 784
Query: 811 KVPRFEFLSHAKPSLFEYPKPTTVPTTTSAV-KLPAAVLSTSXXXXXXXXXXXXXXXXXX 869
++P F F S+ +PSLF YP P T P+TTS+ K+ A+LS S
Sbjct: 785 EMPVFTFKSNCRPSLFAYP-PETKPSTTSSTNKIETAILSYSRKNKLQSSRSAMNIDQDV 843
Query: 870 XXXXXTDLSSAGKGKSSNEKDGDSMQVDXXXXXXXXXXXSFEILINPARVVPAQEKFIKF 929
+ + K K + EK+ + FE NPAR+VP Q ++++F
Sbjct: 844 EKKEKEEKEA--KEKEAKEKE------EKEAAKAEEKEPLFERKSNPARIVPRQLQYVQF 895
Query: 930 LEDSRYVPVKSAPS-GFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMA 988
+D+RY P+K +P+ G V+LRDL PNEPE L + + A
Sbjct: 896 -DDARYQPIKKSPAIGIVMLRDLTPNEPEQLVVKEKPETKQETVGNQSGTATATASLPNA 954
Query: 989 VDE------EPQPPAPFEYT 1002
EP P PFE+T
Sbjct: 955 TTTTSPTLPEPSTPEPFEFT 974
Score = 557 (201.1 bits), Expect = 4.7e-207, Sum P(2) = 4.7e-207
Identities = 126/298 (42%), Positives = 183/298 (61%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEI-STSVPIIESLYEDEEFDQHQRQ 64
++S L++L+E LK ++L L+S VD+FW EI S+S+ I+SL +++F +H+
Sbjct: 4 INSVSNYLSLLDEDQLELKSYSLEKLDSCVDEFWSEIASSSIDKIKSLSVNKQFPKHE-- 61
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
LA+L++SKV+Y L + +S+ YAL AGSLF+V S+Y+ TLL K IDEY IK + + +
Sbjct: 62 LASLVLSKVYYNLSDFPNSMEYALSAGSLFNVLSKSEYIETLLYKFIDEY--IKLRTSTN 119
Query: 125 NDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSY 184
D N P LE+IV M D+C +G Y+QA+GIAIE RRLD +E+AI++S NV+ LSY
Sbjct: 120 KDTVIN--PHLESIVMGMFDRCFKEGSYKQALGIAIEARRLDIIEKAISQSGNVNSMLSY 177
Query: 185 CINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRS 244
C+++ + VN PDYLS+ QCL+FLD V +IL L++
Sbjct: 178 CLHICNVSVNNRHFRHSVLGILVNLHLAQEKPDYLSVVQCLIFLDNHIEVATILLSLIKK 237
Query: 245 ENKDDALLAFQIAFDLVENEHQAFLLNVRDHLP-VPKTQPLQTVQPGSNDPPSAQNDS 301
+ ++ LLA+QI FDL +N Q FLLNVR+ LP V K T ++D DS
Sbjct: 238 D-EESLLLAYQIGFDLFQNSTQQFLLNVRNRLPPVEKKSTTTTTTTPASDSMEIDIDS 294
>ASPGD|ASPL0000047917 [details] [associations]
symbol:AN1700 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACD01000026 InterPro:IPR004155 SMART:SM00567
eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 OrthoDB:EOG4KD9V5 RefSeq:XP_659304.1
ProteinModelPortal:Q5BCN0 STRING:Q5BCN0
EnsemblFungi:CADANIAT00008343 GeneID:2874940 KEGG:ani:AN1700.2
Uniprot:Q5BCN0
Length = 1144
Score = 1643 (583.4 bits), Expect = 1.9e-190, Sum P(2) = 1.9e-190
Identities = 356/860 (41%), Positives = 507/860 (58%)
Query: 131 VDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITR-SDNV---HGT----- 181
V +L+A++ER+ ++C +Y+Q +GIAIE + L+ L AI R S++ +G
Sbjct: 212 VQGQLKAVIERLFEQCFLQKRYRQVIGIAIEAKDLEVLRTAIMRASEDAKQQNGESRQSE 271
Query: 182 --LSYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILE 239
+ Y +++ V ++PSPDY +I +C+++L+E IL
Sbjct: 272 ELMEYVLDICMGVVQERGFRNEILKLILELLNEIPSPDYFAIAKCVVYLNEHSMASVILR 331
Query: 240 KLLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQN 299
+L+ + +A+QI+FDL +N Q FL V H Q + + P + +
Sbjct: 332 QLVEKGDARSLAVAYQISFDLYDNSTQEFLQKV--H------QEISELVPEKTEDSETKE 383
Query: 300 DSSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNK 359
+ D ++ + + N + E A I IL G +IQL ++FL+ +++
Sbjct: 384 EEPKESDALLDNQSSSIGANADSKVSAEARTA--FKNILDILDGIKTIQLNMEFLHRNSR 441
Query: 360 SDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSAT 419
D+ IL ++ ++E RNS+ HSA +N M+AGT D F R+NL+WL +A NW+KF+AT
Sbjct: 442 VDIAILNKLRDTLEPRNSIFHSAITISNGFMYAGTAQDKFFRDNLEWLGKAVNWSKFTAT 501
Query: 420 AGLGVIHRGHLQQGRSLMAPXX----XXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQ 475
A LGVIHRG+L QG+ L+ P YALGLI+ANHG
Sbjct: 502 AALGVIHRGNLSQGQRLLQPYLPKENSIDGVGNSGSLYSQGGSLYALGLIYANHGGMAVD 561
Query: 476 FLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLL 535
++RD + EVIQH DE IYDD++NVLYTDSA+ GEA G++MGL+
Sbjct: 562 YIRDQFKKATEEVIQHGGALGLGVAGMATGDEGIYDDLRNVLYTDSALNGEAVGLAMGLV 621
Query: 536 MVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 594
M+GT + K E M+ YAH+TQHEKI+RGLA+G+AL +YGR+E AD LI + D DP LR
Sbjct: 622 MLGTGNMKVLEDMIQYAHDTQHEKIVRGLAMGMALIMYGRQEAADELINGLLGDPDPTLR 681
Query: 595 YGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSL 654
YGG+ +ALAY GT++NKA+R+LLH AVSDV+DDVRR AVL+LGF+L+ + + PR+V L
Sbjct: 682 YGGIMTIALAYCGTSSNKAVRKLLHVAVSDVNDDVRRVAVLSLGFILFRKHQSVPRMVEL 741
Query: 655 LSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQIN 714
LSESYNPHVRYGAA+A+GISCAGTGL EAI LLEP+ D DFVRQGALIA+AMV+VQ N
Sbjct: 742 LSESYNPHVRYGAAMALGISCAGTGLDEAIDLLEPMLKDSTDFVRQGALIALAMVLVQQN 801
Query: 715 EANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITA 774
EA + RV + R+ + K++ D+HED M+K G +A GI+DAGGRN TI L ++T + +
Sbjct: 802 EAMNPRVSSLRKTMMKMVSDRHEDAMAKFGCAIALGIIDAGGRNCTISLQTQTGNLNMPG 861
Query: 775 VVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTV 834
+VG +VF Q+WYW+PL +F+SLSF+PT++IG++ L+VP F+F S+ +PSLF+YP V
Sbjct: 862 IVGAAVFLQYWYWFPLTHFLSLSFAPTSVIGVDQKLEVPFFKFHSNTRPSLFDYPPEQQV 921
Query: 835 PTTTSAVKLPAAVLSTSXXXXXXXXXXXXXXXXXXXXXXXTDLS-----------SAGKG 883
+ K+ AVLST+ T + +
Sbjct: 922 KAEEAPEKVKTAVLSTTALAKRRALRREKQHRRESMDVDQTPTTPKVADQMPEKMETDED 981
Query: 884 KSSNE-KDGDSMQVDXXXXXXXXXXXSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAP 942
K E K+GD V+ +E L N +RV+PAQ K++ F D RY PVK
Sbjct: 982 KGDEELKEGDKEAVEGQKKKAEREKVGYE-LENMSRVLPAQLKYLTF-PDPRYEPVKRPT 1039
Query: 943 SGFVLLRDLRPNEP-EVLSL 961
G V++ D P EP +V+ L
Sbjct: 1040 GGVVVVLDKTPEEPRDVIEL 1059
Score = 225 (84.3 bits), Expect = 1.9e-190, Sum P(2) = 1.9e-190
Identities = 52/152 (34%), Positives = 88/152 (57%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII---------------- 49
++SA GL+ L+E LK+ AL L+S +D W E+ ++P I
Sbjct: 4 LASAAGLVGFLSEPDSELKVFALQTLDSQIDLLWTEVVDAIPQIRRLCGNGYQTNIQFLR 63
Query: 50 ESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAK 109
E+LYEDE+F + R+LAAL+ +KV+Y+L E ++S+ +ALGAG LF++ ++ T++AK
Sbjct: 64 EALYEDEDFPE--RELAALVAAKVYYHLQEYHESMVFALGAGKLFNLDNGGEFEETIIAK 121
Query: 110 AIDEYASIK-SKAAESNDEAANVDPRLEAIVE 140
+D + S+ S+ + D+ N++ VE
Sbjct: 122 CVDTFISLSTSERPSAGDQPTNLNTAFPTSVE 153
Score = 37 (18.1 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 737 EDTMSKMGAILASGILDA 754
E+ +S GA A+G+L A
Sbjct: 1101 ENPLSGSGAAAAAGVLTA 1118
>CGD|CAL0003585 [details] [associations]
symbol:RPN2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
CGD:CAL0003585 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACQ01000070 EMBL:AACQ01000071 eggNOG:COG5116
KO:K03032 Pfam:PF01851 RefSeq:XP_716329.1 RefSeq:XP_716391.1
ProteinModelPortal:Q5A3L0 STRING:Q5A3L0 GeneID:3641945
GeneID:3642027 KEGG:cal:CaO19.12725 KEGG:cal:CaO19.5260
Uniprot:Q5A3L0
Length = 952
Score = 1352 (481.0 bits), Expect = 4.5e-178, Sum P(2) = 4.5e-178
Identities = 292/642 (45%), Positives = 392/642 (61%)
Query: 334 LNKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAG 393
L KI ILSG + L FL+ +N +D+ IL K ++ R+S+ HSA +ANA MHAG
Sbjct: 283 LKKILNILSGVPTCDLDNTFLFKNNNADITILNKTKNLLDGRSSIFHSAVTFANAFMHAG 342
Query: 394 TTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXX 453
TT D+F R+NL+WL RATNW+KFSATA LGVIH+G+L QGR+++ P
Sbjct: 343 TTDDSFFRKNLEWLGRATNWSKFSATAALGVIHKGNLSQGRTILKPYLPGSSGSANNKGG 402
Query: 454 XXXXXXYALGLIHANHGEGI----KQFLRDS---LRSTNVEVIQHXXXXXXXXXXXXXXD 506
+ALGLI A HG + K F+ D+ S ++++ H
Sbjct: 403 SL----FALGLIFAGHGREVIGTLKSFIDDNGNAAGSNDIDIQLHGAALGAGVAGMGSKS 458
Query: 507 EDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLAL 565
E +Y+ +K VLY+DSA++ +AA + MGL+M+G+ +E+A +MLTYA ETQHE IIRGLA+
Sbjct: 459 ESLYESLKVVLYSDSAISSQAAALGMGLVMLGSGNEEAIKDMLTYALETQHENIIRGLAI 518
Query: 566 GIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDV 625
GIAL YGREE+AD +I+Q+ + ILRYGG + +ALAY+GT NN AI++LLHFAVSD
Sbjct: 519 GIALLSYGREEKADEIIDQLMNQESSILRYGGAFTIALAYAGTGNNNAIKKLLHFAVSDP 578
Query: 626 SDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAIS 685
SDDVRR +VL+LGF+L + P+IV LLS+S+NPHVRYG ALA+GISCAG AI
Sbjct: 579 SDDVRRASVLSLGFLLIRDYTAAPQIVKLLSQSHNPHVRYGTALALGISCAGRAYPAAIE 638
Query: 686 LLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGA 745
+LEPLT D VDFVRQGAL+A +M+++Q NE +V F +Q I +KHED ++K GA
Sbjct: 639 VLEPLTKDAVDFVRQGALMASSMILIQQNEFIYPKVKEFTKQYADTIKNKHEDALAKFGA 698
Query: 746 ILASGILDAGGRNVTIRLL-SKTKHDKITAVVGLSVFSQFWYWYPLIYFISLSFSPTALI 804
LA GI+DAGGRN TI L S+T A+VGL++F Q WYW+PL +F+SLSF+PT++I
Sbjct: 699 TLAQGIIDAGGRNSTINLENSQTNTLNTKAIVGLTLFVQSWYWFPLAHFLSLSFAPTSII 758
Query: 805 GLN-YDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXXXXXXXX 863
G+ DLK P+FE HA P F+YP KL AVLST+
Sbjct: 759 GVRGQDLKAPKFELNCHANPEYFQYPPKVEEAKEKQPDKLATAVLSTTAKAKTRAKKKQS 818
Query: 864 XXXXXXXXXXXT-DLSSAGK----GKSSNE---KDGDSMQVDXXXXXXXXXXXSFEILIN 915
D+ K K SN+ K+ V ++I N
Sbjct: 819 QKEGGDIKAEDKMDVDEETKPKVDAKESNDDEKKETKKQPVSDEPVTVRYARTPYKIS-N 877
Query: 916 PARVVPAQEKFIKFLEDSRYVPVKS--APSGFVLLRDLRPNE 955
+RV+P Q FI F++D R+VPV+ SG V+L+D +P E
Sbjct: 878 LSRVLPVQSNFISFIKDDRFVPVRKYRGSSGIVVLQDNKPEE 919
Score = 399 (145.5 bits), Expect = 4.5e-178, Sum P(2) = 4.5e-178
Identities = 93/275 (33%), Positives = 160/275 (58%)
Query: 8 SAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAA 67
SA LA+L E +LK +ALS+LN VDQ W EI+ ++ +E LYED+ FD+ ++LAA
Sbjct: 5 SAAPYLALLGEPDSTLKSYALSSLNQVVDQLWAEIANNITELEELYEDDSFDR--KELAA 62
Query: 68 LLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDE 127
L++SKV+Y LG+ + ++ YAL AG+ F++ E S Y+ T++++ I+ Y S+ + + ND
Sbjct: 63 LVISKVYYNLGDFDAAVKYALYAGNEFNLEEKSQYMETIVSQCINLYNSLSQQ--KFNDS 120
Query: 128 AANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAI-----TRSDNVHGTL 182
+DPRL AI E+ML+KC+ + + ++G+A+E RLD +E + + +
Sbjct: 121 TTKIDPRLTAIFEKMLNKCLKANEVKLSLGVALESYRLDLVESILQDQIKNNEEQALNLI 180
Query: 183 SYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPS-PDYLSICQCLMFLDEPEGVVSILEKL 241
+Y + S++ V+ L D+ +I + ++ L++ E V + ++L
Sbjct: 181 NYVLVCSNNTVSNTNFRVQVLNSLISLLLSLKKHQDFFTIIKIIVQLNDSELAVKLFQEL 240
Query: 242 LRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHL 276
+ ++N+D L+A+Q AFDLV Q L V + L
Sbjct: 241 I-NQNED--LIAYQAAFDLVNAASQELLDLVMEKL 272
Score = 40 (19.1 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 696 DFVRQGALIAMAMVMVQINEANDSRVGTFRRQL 728
D V + + +VM +++ A +S GT ++ L
Sbjct: 255 DLVNAASQELLDLVMEKLSNAKESENGTLKKIL 287
>UNIPROTKB|J9P4R4 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 EMBL:AAEX03014431
Ensembl:ENSCAFT00000044920 Uniprot:J9P4R4
Length = 701
Score = 1578 (560.5 bits), Expect = 4.5e-162, P = 4.5e-162
Identities = 332/680 (48%), Positives = 448/680 (65%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 124
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 125 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 244 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSST 303
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + +
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 304 AEDVQMNEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 360
+E ++ E T + V E +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SESMETEEKTGSVLVGKTPEVSPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 361 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 420
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 421 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 480
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 481 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 540
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 541 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 599
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 600 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 659
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 660 NPHVRYGAALAVGISCAGTG 679
NPHVRYGA +A+GI CAGTG
Sbjct: 645 NPHVRYGADMALGICCAGTG 664
Score = 157 (60.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 56/237 (23%), Positives = 104/237 (43%)
Query: 526 EAAGI-SMGLLMVGTASEKAGEMLTYAHETQHEKIIRGLALGIALTVYG--REEEADTLI 582
E G+ ++GL+ + +L ++ + G +LG+ L G R++ D L
Sbjct: 439 EGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLK 498
Query: 583 EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLY 642
+ +D D + AL L G+ N +AI ++ +A + + R + + V+Y
Sbjct: 499 TNLYQD-DAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMY 557
Query: 643 SEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAIS-LLEPLTSDVVDFVRQG 701
E+ ++ L +P +R V ++ G+G ++AI LL SDV D VR+
Sbjct: 558 GRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRA 617
Query: 702 ALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRN 758
A+ ++ ++ + E S V +L + + + GA +A GI AG N
Sbjct: 618 AVESLGFILFRTPEQCPSVVS---------LLSESYNPHVRYGADMALGICCAGTGN 665
>SGD|S000001337 [details] [associations]
symbol:RPN2 "Subunit of the 26S proteasome" species:4932
"Saccharomyces cerevisiae" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IMP;IPI] [GO:0034515 "proteasome
storage granule" evidence=IDA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043248 "proteasome
assembly" evidence=IGI] [GO:0050790 "regulation of catalytic
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 SGD:S000001337 INTERPRO:IPR002015 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:BK006942 GO:GO:0050790 GO:GO:0043248 GO:GO:0006511 EMBL:Z37997
GO:GO:0042176 GO:GO:0034515 GO:GO:0008540 PDB:4B4T PDBsum:4B4T
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
KO:K03032 OMA:CVENAEL Pfam:PF01851 OrthoDB:EOG4KD9V5 EMBL:L06321
PIR:S48369 RefSeq:NP_012190.1 PDB:4ADY PDBsum:4ADY
ProteinModelPortal:P32565 SMR:P32565 DIP:DIP-4638N IntAct:P32565
MINT:MINT-539880 STRING:P32565 PaxDb:P32565 PeptideAtlas:P32565
EnsemblFungi:YIL075C GeneID:854735 KEGG:sce:YIL075C NextBio:977437
Genevestigator:P32565 GermOnline:YIL075C Uniprot:P32565
Length = 945
Score = 1186 (422.6 bits), Expect = 8.5e-162, Sum P(2) = 8.5e-162
Identities = 255/633 (40%), Positives = 372/633 (58%)
Query: 340 ILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTF 399
ILSG + FL ++ D+ +L K S++ + S+ H+A AN MHAGTT ++F
Sbjct: 289 ILSGLPTCDYYNTFLLNNKNIDIGLLNKSKSSLDGKFSLFHTAVSVANGFMHAGTTDNSF 348
Query: 400 LRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXX 459
++ NL WL +A NWAKF+ATA LGVIH+G+L +G+ +MAP
Sbjct: 349 IKANLPWLGKAQNWAKFTATASLGVIHKGNLLEGKKVMAPYLPGSRASSRFIKGGSL--- 405
Query: 460 YALGLIHANHGEGIKQFLRDSLRSTN-------VEVIQHXXXXXXXXXXXXXXDEDIYDD 512
Y LGLI+A G +L++ + + V+V+ H + ++Y+
Sbjct: 406 YGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEA 465
Query: 513 IKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTV 571
+K VLY DSA +GEAA + MGL M+GT +A +M TY+ ETQH I RGLA+G+AL
Sbjct: 466 LKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALIN 525
Query: 572 YGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRR 631
YGR+E AD LI +M + +LRYGG + +ALAY+GT NN A+++LLH AVSD +DDVRR
Sbjct: 526 YGRQELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDSNDDVRR 585
Query: 632 TAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLT 691
AV+ALGFVL + PRIV LLS+S+N HVR G A A+GI+CAG GL AI +L+PLT
Sbjct: 586 AAVIALGFVLLRDYTTVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGLQSAIDVLDPLT 645
Query: 692 SDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGI 751
D VDFVRQ A+IA++M+++Q E + +V + +I +KH++ ++K GA +A GI
Sbjct: 646 KDPVDFVRQAAMIALSMILIQQTEKLNPQVADINKNFLSVITNKHQEGLAKFGACVAQGI 705
Query: 752 LDAGGRNVTIRLLSKTKHDKIT-AVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLN-YD 809
++AGGRNVTI+L + T +VVGL +FSQFWYW+PL +F+SLSF+PT +IG+ D
Sbjct: 706 MNAGGRNVTIQLENADTGTLDTKSVVGLVMFSQFWYWFPLAHFLSLSFTPTTVIGIRGSD 765
Query: 810 LKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXXXXXXXXXXXXXX 869
+P+F+ +AK F YP+ + K+ AVLST+
Sbjct: 766 QAIPKFQMNCYAKEDAFSYPRMYEEASGKEVEKVATAVLSTTARAKARAKKTKKEKGPNE 825
Query: 870 XXXXXTDLSSAGKGKSSNEKD-GDSMQVDXXXXXXXXXXXSFEILINPARVVPAQEKFIK 928
+ K + +N+K ++ + D +++ N R++P Q ++I
Sbjct: 826 EEKKK-EHEEKEKERETNKKGIKETKENDEEFYKNKYSSKPYKV-DNMTRILPQQSRYIS 883
Query: 929 FLEDSRYVPVKS--APSGFVLLRDLRPNEPEVL 959
F++D R+VPV+ +G V+LRD P EP L
Sbjct: 884 FIKDDRFVPVRKFKGNNGVVVLRDREPKEPVAL 916
Score = 411 (149.7 bits), Expect = 8.5e-162, Sum P(2) = 8.5e-162
Identities = 98/274 (35%), Positives = 161/274 (58%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQL 65
+++A LLA+L E+ S+K +AL ++N+ VDQ W EIS +P IE+LY+D+ F R++
Sbjct: 3 LTTAAPLLALLRENQDSVKTYALESINNVVDQLWSEISNELPDIEALYDDDTFSD--REM 60
Query: 66 AALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESN 125
AAL+ SKV+Y LGE ++ YAL A FD+ E S +V T+++K+I+ Y SK +
Sbjct: 61 AALIASKVYYNLGEYESAVKYALAAKDRFDIDEKSQFVETIVSKSIEMYVQEASKQYTKD 120
Query: 126 DEAAN---VDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAI-------TRS 175
++ +DP+L +I ERM++KC+ + + A+GIA+E RLD +E A+ + S
Sbjct: 121 EQFYTKDIIDPKLTSIFERMIEKCLKASELKLALGIALEGYRLDIIESALKSKLDQDSTS 180
Query: 176 DNVHGTLSYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVV 235
+NV ++Y + ++ + V +P+ DYL++ + ++ L++ G+
Sbjct: 181 ENVK-IINYLLTLAITTVTNSKFRSSILRKSFDFLMNMPNCDYLTLNKVVVNLNDA-GLA 238
Query: 236 SILEKLLRSENKDDALLAFQIAFDLVENEHQAFL 269
L K L+ EN D+ L A QIAFDLV + Q L
Sbjct: 239 LQLFKKLKEEN-DEGLSA-QIAFDLVSSASQQLL 270
>GENEDB_PFALCIPARUM|PF14_0632 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 933 (333.5 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 191/402 (47%), Positives = 268/402 (66%)
Query: 460 YALGLIHANHGEG---IKQFLRDSLRST-NVEVIQHXXXXXXXXX-XXXXXDEDIYDDIK 514
YALGLIHAN+ +K +L L+S N EV+QH DE+ YD++K
Sbjct: 591 YALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSNDENTYDELK 650
Query: 515 NVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYG 573
+LY+DSAVAGE+A ++GLL +G+ +K E+L YAH+TQHEKI R ++ + ++
Sbjct: 651 AILYSDSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQ 710
Query: 574 REEEADTLIEQMTRDQDPILRYGGMYALALAYSGTAN-NK-AIRQLLHFAVSDVSDDVRR 631
+E EAD+LIE++ D+D I+RYGGM+A+A+AY G +N NK I++LLHF+VSDVSDDVRR
Sbjct: 711 KEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRR 770
Query: 632 TAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLT 691
AV+ALGFVL + P Q P+ ++LL ESYNPHVRYGAALA+GI+C+ T EAI++L PL
Sbjct: 771 AAVIALGFVLCNSPNQVPKFLNLLIESYNPHVRYGAALALGIACSATANEEAINMLMPLL 830
Query: 692 SDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGI 751
+D DFVRQ A I++ ++ Q NE + ++ ++ KI+ DKHED ++K GAI+++G+
Sbjct: 831 TDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKYKEEIMKILSDKHEDIIAKFGAIVSAGL 890
Query: 752 LDAGGRNVTIRLLSKTKHD-KITAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDL 810
LD GRN ++ + + A G +FSQ WYW+PLI+ ISL+F PT LIGL DL
Sbjct: 891 LDICGRNAISTFFTRRGNIIRPQAAAGFCLFSQLWYWFPLIHMISLTFMPTCLIGLTEDL 950
Query: 811 KVPR-FEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTS 851
KVP+ F LS + F+YP + T + AVLST+
Sbjct: 951 KVPKNFSILSTSNNQNFDYPSFLSKEKTQEKKETVTAVLSTT 992
Score = 407 (148.3 bits), Expect = 1.0e-82, Sum P(4) = 1.0e-82
Identities = 97/279 (34%), Positives = 151/279 (54%)
Query: 291 SNDPPSAQN-DSSTAEDVQMNEGTPASNVNVQD----ED-----PKEVIYAERLNKIKGI 340
+ND P+ N D D N+ +N+N + ED K+ I+ ++ K+ I
Sbjct: 401 TNDEPTYNNNDDKAINDGNDNDNNNNNNINNNNNNIVEDVLKYISKKHIFYNKMKKLLYI 460
Query: 341 LSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFL 400
L+G+ + L ++FL+ +N +DL++L T K V+ R+S+ H + A+A+M GTT D FL
Sbjct: 461 LTGKVTGNLYIEFLHRNNHADLILLDTYKNIVDSRSSITHHGIVIAHALMQTGTTCDVFL 520
Query: 401 RENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMA---PXXXXXXXXXX-------- 449
R N++WLS+A NW KFSATA LGV+++GH+ + +++ P
Sbjct: 521 RSNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAP 580
Query: 450 XXXXXXXXXXYALGLIHANHGEG---IKQFLRDSLRST-NVEVIQHXXXXXXXXX-XXXX 504
YALGLIHAN+ +K +L L+S N EV+QH
Sbjct: 581 SGVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDS 640
Query: 505 XDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEK 543
DE+ YD++K +LY+DSAVAGE+A ++GLL +G+ +K
Sbjct: 641 NDENTYDELKAILYSDSAVAGESAAYAIGLLKLGSGDDK 679
Score = 275 (101.9 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 55/114 (48%), Positives = 81/114 (71%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
+V+SA G++A+LNE SLKL L LN+ VD +WPE++ S+ IE L EDE+F R+
Sbjct: 12 IVTSASGVIALLNEEETSLKLFGLEKLNAIVDVYWPELADSIFKIEELCEDEDFVG--RE 69
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIK 118
LA LL SK++++L + +++L YAL AG LF++ E S YV T+LAK I++Y I+
Sbjct: 70 LANLLASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAKCIEKYVEIR 123
Score = 214 (80.4 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 60/210 (28%), Positives = 115/210 (54%)
Query: 131 VDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYCIN--- 187
++ ++E +V+ M+D CI ++A+G+A++ RRLDK+E I ++N L++ IN
Sbjct: 181 INQKMELLVDEMIDVCIKSNDIKEALGVALDARRLDKVEYIIANAENKIEILAHSINNEK 240
Query: 188 ---VSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRS 244
++ SF N ++L + +Y+++C+CL ++D+ + V IL KLL +
Sbjct: 241 HINMNKSFRNEYFKLLVNLYLSLSE-EELKT-EYINLCECLYYIDDYKKVAEILLKLLHN 298
Query: 245 ENKDDALLAFQIAFDLVENEHQAFLLNV----RDHLPVPKTQP------LQTVQPGSNDP 294
+ L+A+QI+FDLV+ E++ FL N+ +++L K + T Q +ND
Sbjct: 299 YH----LMAYQISFDLVDFENKIFLRNILGQIKENLIQNKAYYFGEEYFVTTPQEENNDA 354
Query: 295 PSAQNDSSTAEDVQMNEGTPASNVNVQDED 324
+ +N+S+ + Q +E +N +D+D
Sbjct: 355 DNKENESNAITNEQQDE----NNNEKEDKD 380
Score = 118 (46.6 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 915 NPARVVPAQEKFIKFLEDSRYVPV-KSAPSGFVLLRDLRPNEP 956
NP RV+ QEK+I+++ +SRY+PV + SGF++L D+ P EP
Sbjct: 1102 NPCRVIKMQEKYIEYIPNSRYIPVLPTRKSGFIMLNDITPLEP 1144
Score = 53 (23.7 bits), Expect = 4.7e-111, Sum P(4) = 4.7e-111
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 34 FVDQFWP-EISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGS 92
F +QF +I TS + +L +EE L L V Y EL DS+
Sbjct: 3 FENQFSKHDIVTSASGVIALLNEEETSLKLFGLEKLNAI-VDVYWPELADSIF------K 55
Query: 93 LFDVSEDSDYVH----TLLAKAI----DEYASIKSKAAESNDEAANVDPRLEAIVERMLD 144
+ ++ ED D+V LLA I ++Y+ K A + N+ + + VE ML
Sbjct: 56 IEELCEDEDFVGRELANLLASKIYFHLEKYSEAL-KYALCAGKLFNIKEKSQ-YVETMLA 113
Query: 145 KCITDGKYQQAMGIAIECRRLDKLEEAITRSDNV 178
KCI + M I+ + + IT ++++
Sbjct: 114 KCIEKYVEIREMQYDIDYNNQHNINDGITNNNDI 147
Score = 46 (21.3 bits), Expect = 5.2e-44, Sum P(4) = 5.2e-44
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 594 RYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALG-FVLYSEPEQTPRIV 652
++ +L + Y G N + H +DVS ++ + L +YSE +
Sbjct: 535 KFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAPSGVYSEGGSLYAL- 593
Query: 653 SLLSESYN 660
L+ +YN
Sbjct: 594 GLIHANYN 601
Score = 37 (18.1 bits), Expect = 2.4e-134, Sum P(4) = 2.4e-134
Identities = 7/38 (18%), Positives = 18/38 (47%)
Query: 288 QPGSNDPPSAQNDSSTAEDVQMNEGTPASNVNVQDEDP 325
Q N+ D++ ++ + N+ N N+ +++P
Sbjct: 368 QQDENNNEKEDKDNNDGKNPEHNDDNNKPNDNLTNDEP 405
>UNIPROTKB|Q8IKH3 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 933 (333.5 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 191/402 (47%), Positives = 268/402 (66%)
Query: 460 YALGLIHANHGEG---IKQFLRDSLRST-NVEVIQHXXXXXXXXX-XXXXXDEDIYDDIK 514
YALGLIHAN+ +K +L L+S N EV+QH DE+ YD++K
Sbjct: 591 YALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSNDENTYDELK 650
Query: 515 NVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYG 573
+LY+DSAVAGE+A ++GLL +G+ +K E+L YAH+TQHEKI R ++ + ++
Sbjct: 651 AILYSDSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQ 710
Query: 574 REEEADTLIEQMTRDQDPILRYGGMYALALAYSGTAN-NK-AIRQLLHFAVSDVSDDVRR 631
+E EAD+LIE++ D+D I+RYGGM+A+A+AY G +N NK I++LLHF+VSDVSDDVRR
Sbjct: 711 KEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRR 770
Query: 632 TAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLT 691
AV+ALGFVL + P Q P+ ++LL ESYNPHVRYGAALA+GI+C+ T EAI++L PL
Sbjct: 771 AAVIALGFVLCNSPNQVPKFLNLLIESYNPHVRYGAALALGIACSATANEEAINMLMPLL 830
Query: 692 SDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGI 751
+D DFVRQ A I++ ++ Q NE + ++ ++ KI+ DKHED ++K GAI+++G+
Sbjct: 831 TDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKYKEEIMKILSDKHEDIIAKFGAIVSAGL 890
Query: 752 LDAGGRNVTIRLLSKTKHD-KITAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDL 810
LD GRN ++ + + A G +FSQ WYW+PLI+ ISL+F PT LIGL DL
Sbjct: 891 LDICGRNAISTFFTRRGNIIRPQAAAGFCLFSQLWYWFPLIHMISLTFMPTCLIGLTEDL 950
Query: 811 KVPR-FEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTS 851
KVP+ F LS + F+YP + T + AVLST+
Sbjct: 951 KVPKNFSILSTSNNQNFDYPSFLSKEKTQEKKETVTAVLSTT 992
Score = 407 (148.3 bits), Expect = 1.0e-82, Sum P(4) = 1.0e-82
Identities = 97/279 (34%), Positives = 151/279 (54%)
Query: 291 SNDPPSAQN-DSSTAEDVQMNEGTPASNVNVQD----ED-----PKEVIYAERLNKIKGI 340
+ND P+ N D D N+ +N+N + ED K+ I+ ++ K+ I
Sbjct: 401 TNDEPTYNNNDDKAINDGNDNDNNNNNNINNNNNNIVEDVLKYISKKHIFYNKMKKLLYI 460
Query: 341 LSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFL 400
L+G+ + L ++FL+ +N +DL++L T K V+ R+S+ H + A+A+M GTT D FL
Sbjct: 461 LTGKVTGNLYIEFLHRNNHADLILLDTYKNIVDSRSSITHHGIVIAHALMQTGTTCDVFL 520
Query: 401 RENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMA---PXXXXXXXXXX-------- 449
R N++WLS+A NW KFSATA LGV+++GH+ + +++ P
Sbjct: 521 RSNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAP 580
Query: 450 XXXXXXXXXXYALGLIHANHGEG---IKQFLRDSLRST-NVEVIQHXXXXXXXXX-XXXX 504
YALGLIHAN+ +K +L L+S N EV+QH
Sbjct: 581 SGVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDS 640
Query: 505 XDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEK 543
DE+ YD++K +LY+DSAVAGE+A ++GLL +G+ +K
Sbjct: 641 NDENTYDELKAILYSDSAVAGESAAYAIGLLKLGSGDDK 679
Score = 275 (101.9 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 55/114 (48%), Positives = 81/114 (71%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQ 64
+V+SA G++A+LNE SLKL L LN+ VD +WPE++ S+ IE L EDE+F R+
Sbjct: 12 IVTSASGVIALLNEEETSLKLFGLEKLNAIVDVYWPELADSIFKIEELCEDEDFVG--RE 69
Query: 65 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIK 118
LA LL SK++++L + +++L YAL AG LF++ E S YV T+LAK I++Y I+
Sbjct: 70 LANLLASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAKCIEKYVEIR 123
Score = 214 (80.4 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 60/210 (28%), Positives = 115/210 (54%)
Query: 131 VDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYCIN--- 187
++ ++E +V+ M+D CI ++A+G+A++ RRLDK+E I ++N L++ IN
Sbjct: 181 INQKMELLVDEMIDVCIKSNDIKEALGVALDARRLDKVEYIIANAENKIEILAHSINNEK 240
Query: 188 ---VSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRS 244
++ SF N ++L + +Y+++C+CL ++D+ + V IL KLL +
Sbjct: 241 HINMNKSFRNEYFKLLVNLYLSLSE-EELKT-EYINLCECLYYIDDYKKVAEILLKLLHN 298
Query: 245 ENKDDALLAFQIAFDLVENEHQAFLLNV----RDHLPVPKTQP------LQTVQPGSNDP 294
+ L+A+QI+FDLV+ E++ FL N+ +++L K + T Q +ND
Sbjct: 299 YH----LMAYQISFDLVDFENKIFLRNILGQIKENLIQNKAYYFGEEYFVTTPQEENNDA 354
Query: 295 PSAQNDSSTAEDVQMNEGTPASNVNVQDED 324
+ +N+S+ + Q +E +N +D+D
Sbjct: 355 DNKENESNAITNEQQDE----NNNEKEDKD 380
Score = 118 (46.6 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 915 NPARVVPAQEKFIKFLEDSRYVPV-KSAPSGFVLLRDLRPNEP 956
NP RV+ QEK+I+++ +SRY+PV + SGF++L D+ P EP
Sbjct: 1102 NPCRVIKMQEKYIEYIPNSRYIPVLPTRKSGFIMLNDITPLEP 1144
Score = 53 (23.7 bits), Expect = 4.7e-111, Sum P(4) = 4.7e-111
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 34 FVDQFWP-EISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGS 92
F +QF +I TS + +L +EE L L V Y EL DS+
Sbjct: 3 FENQFSKHDIVTSASGVIALLNEEETSLKLFGLEKLNAI-VDVYWPELADSIF------K 55
Query: 93 LFDVSEDSDYVH----TLLAKAI----DEYASIKSKAAESNDEAANVDPRLEAIVERMLD 144
+ ++ ED D+V LLA I ++Y+ K A + N+ + + VE ML
Sbjct: 56 IEELCEDEDFVGRELANLLASKIYFHLEKYSEAL-KYALCAGKLFNIKEKSQ-YVETMLA 113
Query: 145 KCITDGKYQQAMGIAIECRRLDKLEEAITRSDNV 178
KCI + M I+ + + IT ++++
Sbjct: 114 KCIEKYVEIREMQYDIDYNNQHNINDGITNNNDI 147
Score = 46 (21.3 bits), Expect = 5.2e-44, Sum P(4) = 5.2e-44
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 594 RYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALG-FVLYSEPEQTPRIV 652
++ +L + Y G N + H +DVS ++ + L +YSE +
Sbjct: 535 KFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAPSGVYSEGGSLYAL- 593
Query: 653 SLLSESYN 660
L+ +YN
Sbjct: 594 GLIHANYN 601
Score = 37 (18.1 bits), Expect = 2.4e-134, Sum P(4) = 2.4e-134
Identities = 7/38 (18%), Positives = 18/38 (47%)
Query: 288 QPGSNDPPSAQNDSSTAEDVQMNEGTPASNVNVQDEDP 325
Q N+ D++ ++ + N+ N N+ +++P
Sbjct: 368 QQDENNNEKEDKDNNDGKNPEHNDDNNKPNDNLTNDEP 405
>POMBASE|SPBC17D11.07c [details] [associations]
symbol:rpn2 "19S proteasome regulatory subunit Rpn2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 PomBase:SPBC17D11.07c INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 GO:GO:0030234
SUPFAM:SSF48371 GO:GO:0043161 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR GO:GO:0042176
GO:GO:0008540 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 PIR:T39718 RefSeq:NP_596381.1
ProteinModelPortal:O74762 IntAct:O74762 STRING:O74762
EnsemblFungi:SPBC17D11.07c.1 GeneID:2540191 KEGG:spo:SPBC17D11.07c
OrthoDB:EOG4KD9V5 NextBio:20801323 Uniprot:O74762
Length = 965
Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
Identities = 293/631 (46%), Positives = 406/631 (64%)
Query: 340 ILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTF 399
ILSGE +++ +FLY+HN +D+LIL K S+E RNSV H+A +ANA M+ GT+ D+F
Sbjct: 308 ILSGEQTVKYDREFLYAHNNTDMLILNRTKDSLEARNSVFHNAVTFANAFMNFGTSSDSF 367
Query: 400 LRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXX 459
R+NL WLS+A NW+KF+ATA LGVIHRG+ Q +++ P
Sbjct: 368 FRDNLSWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSEGGAF- 426
Query: 460 YALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYT 519
YA+GLIHANHG G+ ++LR+ L+ T E++Q+ DE +Y+ +K +L+
Sbjct: 427 YAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFN 486
Query: 520 DSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEA 578
D+AVAG AAGISMGL+M+GTAS A EML YAHETQHEKIIRGL +GIAL VYGR++EA
Sbjct: 487 DNAVAGSAAGISMGLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEA 546
Query: 579 DTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALG 638
D +I+++ D DP LRY GM+A ALAY GT+N+K +R +LH +VSDV+DDVRR AV ALG
Sbjct: 547 DGIIKELNNDLDPTLRYAGMFATALAYCGTSNSKIVRDVLHISVSDVNDDVRRAAVCALG 606
Query: 639 FVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFV 698
F+ + +P V LL +SYNPHVRYG+A+A+GI+CA +G + A+ LL L D DFV
Sbjct: 607 FICFKDPNALISTVELLVDSYNPHVRYGSAIALGIACANSGSNAALDLLSRLVEDATDFV 666
Query: 699 RQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRN 758
RQGA+IA AM++ Q N+ +S+V R+ E++I +KHED ++K+GA LA GI+DAGGRN
Sbjct: 667 RQGAMIAQAMILTQHNDQLNSKVSGIRKHFEQVINEKHEDALAKLGATLAQGIIDAGGRN 726
Query: 759 VTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFL 818
VTI L + T K++A+VGL+VF Q+WYW+PL +F+SLSFSPTALIGL+ +L P+F F+
Sbjct: 727 VTIALQTATGSLKLSAIVGLTVFLQYWYWFPLTHFMSLSFSPTALIGLDKNLNAPKFSFI 786
Query: 819 SHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXXXXXXXXXXXXXXXXXXXTDLS 878
S+ +P LF YP + PT + K+ AVLST+ +
Sbjct: 787 SNVRPKLFAYPPKSVQPTAKTVQKVETAVLSTTVKAQARAKRAEREKASKGSNDDEMKID 846
Query: 879 SAGKGKSSNEKDGDSMQVDXXXXXXXXXXXSF-------EILINPARVVPAQEKFIKFLE 931
K++ EK+ M++D + E L N RVVPAQ +I F
Sbjct: 847 K----KTTEEKEATPMEMDEEKSQDISINGNSKKEEPKSETLENFTRVVPAQLPYISFNL 902
Query: 932 DSRYVPVKSAPSGFVLLRDLRPNE-PEVLSL 961
+ RY PV+ G ++L D ++ P+++ L
Sbjct: 903 NGRYYPVRKFTGGVLMLIDRESDKAPDLIEL 933
Score = 464 (168.4 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 138/443 (31%), Positives = 217/443 (48%)
Query: 4 TMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQR 63
++++SAGGL+A+L+E L++HAL + F+DQ WPEIS V IE +YED F + R
Sbjct: 10 SIITSAGGLMALLDEQERELQVHALLKIYEFIDQLWPEISDDVTKIEVMYEDHSFPE--R 67
Query: 64 QLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE 123
+LAAL+VSKV+YYLGE +++L +AL +G F ++SDY TL+ K ID + KS
Sbjct: 68 ELAALVVSKVYYYLGEYDEALLFALSSGPKFLHDKNSDYKETLIFKCIDMFIH-KSAELY 126
Query: 124 SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 183
N +A +D RL +VE + KC +++ +GIAIE RLD +E I +D
Sbjct: 127 KNPKADPLDERLSGVVEGIFQKCYAKNEWRHVLGIAIEAHRLDIIEY-ILNADKETDLKP 185
Query: 184 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243
Y + ++ + V PDY S+ +C++ L++ +L KL
Sbjct: 186 YVLELAMTVVLDIEFRNRLLRLLLSSFLTETEPDYFSVGKCVVHLNDASVAAKLLMKL-S 244
Query: 244 SENKDDALL-AFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSS 302
S+N D +LL A+Q+AFDL ++ Q FL +V D LP P + + +N ++ S
Sbjct: 245 SQNDDKSLLTAYQLAFDLEDSAPQEFLNSVMDLLPSPS---VANSEEDANADSKKEDSSP 301
Query: 303 TAEDVQMNEGTPASNVNVQDEDPKEVIYAER------LNKIKGILSGETSI---QLTLQ- 352
+++ G + +E +YA LN+ K L S+ +T
Sbjct: 302 CGYIIRILSGEQTVKYD------REFLYAHNNTDMLILNRTKDSLEARNSVFHNAVTFAN 355
Query: 353 -FLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAG--TTVDTFLRENL---DW 406
F+ SD + + N +AT A ++H G LR L D
Sbjct: 356 AFMNFGTSSDSFFRDNLSWLSKANNWSKFTATA-ALGVIHRGYYNQAMNILRPYLPEEDA 414
Query: 407 LSRATNWAKFSATAGLGVIHRGH 429
S +T +++ A +G+IH H
Sbjct: 415 PSSST-YSEGGAFYAMGLIHANH 436
>WB|WBGene00004459 [details] [associations]
symbol:rpn-2 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0072686 "mitotic
spindle" evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938 GO:GO:0008340
GO:GO:0009792 GO:GO:0006915 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0031965
GO:GO:0000003 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2 RefSeq:NP_498347.3
ProteinModelPortal:Q18115 SMR:Q18115 IntAct:Q18115 MINT:MINT-210658
STRING:Q18115 PaxDb:Q18115 PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1
EnsemblMetazoa:C23G10.4b.2 EnsemblMetazoa:C23G10.4b.3 GeneID:175877
KEGG:cel:CELE_C23G10.4 UCSC:C23G10.4a.1 CTD:175877
WormBase:C23G10.4a WormBase:C23G10.4b eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 InParanoid:Q18115
KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851 Uniprot:Q18115
Length = 965
Score = 964 (344.4 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 211/649 (32%), Positives = 344/649 (53%)
Query: 321 QDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCH 380
Q +D ++ + + KI IL G +++ L F HN +D ++++ IK+++ R + H
Sbjct: 289 QQQDARD---EKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENI--RTASAH 343
Query: 381 SATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPX 440
+A + +N +M GTT D FLR NL+W+S+ATNW KF+A A LG+IH G ++ P
Sbjct: 344 NALLISNGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPY 403
Query: 441 XXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQF-LRDSLRSTNVEVIQHXXXXXXXX 499
Y GLIHA HG+ L L++ E ++H
Sbjct: 404 LPKESVEGFGFKEGGAMLAY--GLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGV 461
Query: 500 XXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEK 558
Y+ ++ VL D AV+GE+AGI+MGL+M G +++ E+ Y +TQH+K
Sbjct: 462 AGLGSSSVSNYEKVREVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDK 521
Query: 559 IIRGLALGIALTVYGREEEADTLI-EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQL 617
RG+ G+A +G + +A+ I E + +P+LR G+ L++AY+GT + +R+L
Sbjct: 522 TQRGIRTGLACAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAGTGSPDVVRRL 581
Query: 618 LHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAG 677
L +D + DV+R A + +GFVL +P V++L+E +N HVRYGAA+A+GI+CAG
Sbjct: 582 LEKVATDPNLDVKRYATIGIGFVLSKDPSTCLSYVAMLTEHFNGHVRYGAAMALGIACAG 641
Query: 678 TGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHE 737
TG EAI+L+EP+ SD FVR+GAL+++A++M Q + +V FR+QL K I +K+E
Sbjct: 642 TGNMEAIALIEPMISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNE 701
Query: 738 DTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLS 797
D++ K GAI+A G+LD GG+N + + + K + ++VG+ F W+W+ + +FI+L+
Sbjct: 702 DSLVKFGAIIAQGLLDIGGQNAAVTMQNSDKQPDMGSMVGMMCFLHGWFWHSMHFFIALA 761
Query: 798 FSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXX 857
P+ L+ +N +LK+P +++ HA F YP K+ VLS +
Sbjct: 762 AKPSCLVMMNENLKIPVLDYICHANSQKFAYPPRAESKKDKDVKKIETVVLSITGKKNAS 821
Query: 858 XXXXXXXXXXXXXXXXXTDLSSAGKGKSSN----EKDGDSMQVDXXXXXXXXXXXSFEI- 912
+ ++A S++ + + M+VD +
Sbjct: 822 KKLIAEEKKRREAAASASSAAAAPSSSSTSGTAPAAEDEKMEVDQPGKSKKEKAPEKDTK 881
Query: 913 ----LINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEPE 957
L NPARV+PAQ + I + Y P+K G +++ D E E
Sbjct: 882 PLHRLQNPARVIPAQRQLISISDARAYSPMKPLYKGGIIVADRVDKERE 930
Score = 199 (75.1 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 64/258 (24%), Positives = 118/258 (45%)
Query: 23 LKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELND 82
L L A ++ + V+ W E++ ++P +E L ++ F +H AALLVSKV++ L +
Sbjct: 37 LVLKAFNDWDVLVNT-WFEVADALPAVEQLLDNNTFPEHSS--AALLVSKVYFCLEQYER 93
Query: 83 SLSYALGA------GSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLE 136
+L +AL + + D++YV+ ++ AID Y ++ SK + + + +L
Sbjct: 94 ALEFALRGDFNVVPATRTGLGNDAEYVNKIIETAIDTYKTL-SK------QGSGIPQKLR 146
Query: 137 AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITR--SDNVHGTLSYCINVSHSFVN 194
+++R++ + + + + + E L ++ AI+ +D + + + VN
Sbjct: 147 DLIDRIVARNLDKREIWFVISLGFETTNLAMIDRAISAMPADLTIKNQTTLVETLNRVVN 206
Query: 195 XXXXXXXXXXXXXXXXQ---KLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSENKDDAL 251
+ K PSPD IC+C + D E + L+ K +
Sbjct: 207 GAFDRSFRFQVIDTVIKTYLKCPSPDMSKICECYVLTDNAEAAADTITSLIA---KSLST 263
Query: 252 LAFQIAFDLVENEHQAFL 269
A+QIAFDL E Q FL
Sbjct: 264 RAYQIAFDLYETASQGFL 281
>UNIPROTKB|Q18115 [details] [associations]
symbol:rpn-2 "26S proteasome non-ATPase regulatory subunit
1" species:6239 "Caenorhabditis elegans" [GO:0000502 "proteasome
complex" evidence=NAS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006915 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0031965 GO:GO:0000003 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2
RefSeq:NP_498347.3 ProteinModelPortal:Q18115 SMR:Q18115
IntAct:Q18115 MINT:MINT-210658 STRING:Q18115 PaxDb:Q18115
PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1 EnsemblMetazoa:C23G10.4b.2
EnsemblMetazoa:C23G10.4b.3 GeneID:175877 KEGG:cel:CELE_C23G10.4
UCSC:C23G10.4a.1 CTD:175877 WormBase:C23G10.4a WormBase:C23G10.4b
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
InParanoid:Q18115 KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851
Uniprot:Q18115
Length = 965
Score = 964 (344.4 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 211/649 (32%), Positives = 344/649 (53%)
Query: 321 QDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCH 380
Q +D ++ + + KI IL G +++ L F HN +D ++++ IK+++ R + H
Sbjct: 289 QQQDARD---EKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENI--RTASAH 343
Query: 381 SATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPX 440
+A + +N +M GTT D FLR NL+W+S+ATNW KF+A A LG+IH G ++ P
Sbjct: 344 NALLISNGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPY 403
Query: 441 XXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQF-LRDSLRSTNVEVIQHXXXXXXXX 499
Y GLIHA HG+ L L++ E ++H
Sbjct: 404 LPKESVEGFGFKEGGAMLAY--GLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGV 461
Query: 500 XXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEK 558
Y+ ++ VL D AV+GE+AGI+MGL+M G +++ E+ Y +TQH+K
Sbjct: 462 AGLGSSSVSNYEKVREVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDK 521
Query: 559 IIRGLALGIALTVYGREEEADTLI-EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQL 617
RG+ G+A +G + +A+ I E + +P+LR G+ L++AY+GT + +R+L
Sbjct: 522 TQRGIRTGLACAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAGTGSPDVVRRL 581
Query: 618 LHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAG 677
L +D + DV+R A + +GFVL +P V++L+E +N HVRYGAA+A+GI+CAG
Sbjct: 582 LEKVATDPNLDVKRYATIGIGFVLSKDPSTCLSYVAMLTEHFNGHVRYGAAMALGIACAG 641
Query: 678 TGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHE 737
TG EAI+L+EP+ SD FVR+GAL+++A++M Q + +V FR+QL K I +K+E
Sbjct: 642 TGNMEAIALIEPMISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNE 701
Query: 738 DTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLS 797
D++ K GAI+A G+LD GG+N + + + K + ++VG+ F W+W+ + +FI+L+
Sbjct: 702 DSLVKFGAIIAQGLLDIGGQNAAVTMQNSDKQPDMGSMVGMMCFLHGWFWHSMHFFIALA 761
Query: 798 FSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXX 857
P+ L+ +N +LK+P +++ HA F YP K+ VLS +
Sbjct: 762 AKPSCLVMMNENLKIPVLDYICHANSQKFAYPPRAESKKDKDVKKIETVVLSITGKKNAS 821
Query: 858 XXXXXXXXXXXXXXXXXTDLSSAGKGKSSN----EKDGDSMQVDXXXXXXXXXXXSFEI- 912
+ ++A S++ + + M+VD +
Sbjct: 822 KKLIAEEKKRREAAASASSAAAAPSSSSTSGTAPAAEDEKMEVDQPGKSKKEKAPEKDTK 881
Query: 913 ----LINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEPE 957
L NPARV+PAQ + I + Y P+K G +++ D E E
Sbjct: 882 PLHRLQNPARVIPAQRQLISISDARAYSPMKPLYKGGIIVADRVDKERE 930
Score = 199 (75.1 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 64/258 (24%), Positives = 118/258 (45%)
Query: 23 LKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELND 82
L L A ++ + V+ W E++ ++P +E L ++ F +H AALLVSKV++ L +
Sbjct: 37 LVLKAFNDWDVLVNT-WFEVADALPAVEQLLDNNTFPEHSS--AALLVSKVYFCLEQYER 93
Query: 83 SLSYALGA------GSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLE 136
+L +AL + + D++YV+ ++ AID Y ++ SK + + + +L
Sbjct: 94 ALEFALRGDFNVVPATRTGLGNDAEYVNKIIETAIDTYKTL-SK------QGSGIPQKLR 146
Query: 137 AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITR--SDNVHGTLSYCINVSHSFVN 194
+++R++ + + + + + E L ++ AI+ +D + + + VN
Sbjct: 147 DLIDRIVARNLDKREIWFVISLGFETTNLAMIDRAISAMPADLTIKNQTTLVETLNRVVN 206
Query: 195 XXXXXXXXXXXXXXXXQ---KLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSENKDDAL 251
+ K PSPD IC+C + D E + L+ K +
Sbjct: 207 GAFDRSFRFQVIDTVIKTYLKCPSPDMSKICECYVLTDNAEAAADTITSLIA---KSLST 263
Query: 252 LAFQIAFDLVENEHQAFL 269
A+QIAFDL E Q FL
Sbjct: 264 RAYQIAFDLYETASQGFL 281
>POMBASE|SPBP19A11.03c [details] [associations]
symbol:mts4 "19S proteasome regulatory subunit Mts4"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
PomBase:SPBP19A11.03c INTERPRO:IPR002015 GO:GO:0005829
GO:GO:0005634 GO:GO:0007346 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0043161 EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0042176 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:Y09819 PIR:T52488 RefSeq:NP_596171.1 ProteinModelPortal:P87048
IntAct:P87048 STRING:P87048 EnsemblFungi:SPBP19A11.03c.1
GeneID:2541268 KEGG:spo:SPBP19A11.03c OrthoDB:EOG4P8JSC
NextBio:20802380 Uniprot:P87048
Length = 891
Score = 197 (74.4 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 103/460 (22%), Positives = 184/460 (40%)
Query: 382 ATIYANAIMHAGTTVDTFLR---ENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMA 438
A + NA+++AG + D + E W+ + SATA +G++ ++ G SL+
Sbjct: 370 ANTFVNALVNAGYSNDRLILVDDEKTSWIYKNKESGLISATASIGLLQLWNVDMGLSLLD 429
Query: 439 PXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXX 498
+ N + L + L + +V+ ++
Sbjct: 430 KYLYSSEENTKAGALLGIGVT---NVAVRNEADPAMAILSEYLETGSVK-LRASAILGLG 485
Query: 499 XXXXXXXDEDIYDDIKNVLY-TDSAVAGEA-AGISMGLLMVGTAS-EKAGEMLTYAHE-- 553
ED+ D + ++ TD + A +S+GL+ VGT + + A +L E
Sbjct: 486 LAYSGANREDLLDMLSPIVTDTDCPMQLSCLAALSLGLIFVGTCNGDVASTILQTLMERE 545
Query: 554 --TQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANN 611
Q+++ R +ALG+AL G+++ AD +E + + I R + +Y+GT N
Sbjct: 546 ESAQNDQWGRFMALGLALLFNGKQDLADATVETLKAIEGKIARQAEILVDICSYAGTGNV 605
Query: 612 KAIRQLLHFAVSDVSDDVRRT-------AVLALGFVLYSEP---EQTPRIVSLLSESYNP 661
I++LLH SDD + + A L + + E E R + P
Sbjct: 606 LHIQKLLHICSEPPSDDAKESETTIQTFAALGVATIAMGEDIGAEMVLRHFDHMMHYGEP 665
Query: 662 HVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRV 721
+R LA+G+ A L + D V A+ AM +V + A R+
Sbjct: 666 SIRKAIPLALGLLSASNPQMRIFDTLSRYSHDNDLDVAYNAIFAMGLVGAGTSNA---RL 722
Query: 722 GTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTI-------RLLSKTKHDKI-T 773
RQL H+++ + +A G+L G +T+ ++L +T + T
Sbjct: 723 AQLLRQLASYY---HKESNALFMVRIAQGLLYLGKGTMTLNPYHTERQILGQTAFAGLMT 779
Query: 774 AVVGLSVFSQFW----YWYPLIYFISLSFSPTALIGLNYD 809
V+ + + F +W L+Y I+L+ P LI L D
Sbjct: 780 VVLAMLDANTFVLDTSHW--LLYAITLAIRPRMLITLGED 817
Score = 53 (23.7 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 52 LYEDEEFDQHQRQLAALL-VSKVFYYLGELNDSLSYALGAGSLFDVSE-DSDYVHTLLAK 109
+Y+ + QLA +L V + Y ++SL Y L G D S +YV L ++
Sbjct: 110 IYDSWPQSPQKTQLADILSVLGMSYSNTSKHESLKYRL-QGVTTDPSLWGHEYVRHLASE 168
Query: 110 AIDEYASIKSKAAESND 126
+E+AS + + A ++D
Sbjct: 169 IEEEFASRQEEEAPTDD 185
>ASPGD|ASPL0000062698 [details] [associations]
symbol:AN10020 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
EMBL:BN001308 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
Pfam:PF01851 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EnsemblFungi:CADANIAT00002622 Uniprot:C8VQJ9
Length = 906
Score = 178 (67.7 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 77/311 (24%), Positives = 137/311 (44%)
Query: 528 AGISMGLLMVGTASEKAGEML--TYAHETQHEKI----IRGLALGIALTVYGREEEADTL 581
A +S+GL+ VG+++ + E + T E + +++ R +ALG+AL +GR+EE D +
Sbjct: 528 AAVSLGLVFVGSSNHQVSEAIATTLMDEERQKQLKDKWTRFMALGLALLYFGRQEEVDVI 587
Query: 582 IEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFA--VSDVSDD------VRRTA 633
++ + P+ + + A A++GT +++LLH V + SD+ V+ A
Sbjct: 588 LDILKAVDHPMAKPTSVLASVCAWAGTGTVLKLQELLHICNDVIEESDEKQGEELVQSYA 647
Query: 634 VLALGFVLYSEPEQTPRIVSLLSE--SYNP-HVRYGAALAVGISCAGTGLSEAISLLEPL 690
VL L + E I+ Y ++R LA+G+ + L
Sbjct: 648 VLGLSLIAMGEDVGQDMILRQFGHLMHYGASNIRKAVPLAMGLISPSNPQMKVYDTLSRY 707
Query: 691 TSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASG 750
+ D + V A+ AM + +SR+ RQL H D S +A G
Sbjct: 708 SHDNDNDVAINAIFAMGLCGAG---TKNSRLAQLLRQLASYY---HRDQNSLFMVRIAQG 761
Query: 751 ILDAGGRNVTI-------RLLSKTKH-DKITAVVGLSVFSQFWY--WYPLIYFISLSFSP 800
+L G +T+ ++LS+ +T +V L QF + L+YF+ + P
Sbjct: 762 LLHMGKGTMTLNPFHTDRQVLSRVSAAGLLTVLVSLIDAKQFILAEHHYLLYFLITAMYP 821
Query: 801 TALIGLNYDLK 811
L+ L+ DL+
Sbjct: 822 RFLVTLDEDLQ 832
Score = 61 (26.5 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 930 LEDSRYVPVKSAPSGFVLLRDLRPNEPE 957
LED +Y+P+ S G V+LR PN E
Sbjct: 876 LEDEKYIPLSSTLEGLVILRK-NPNWEE 902
Score = 51 (23.0 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 26/100 (26%), Positives = 41/100 (41%)
Query: 271 NVRDHLPVPKTQPLQTVQP-GSNDPPSAQNDSSTAEDVQMNEGTPASNVNVQDEDPKEVI 329
+V+D L K +P + Q G Q + + ED Q+ +Q+ D +
Sbjct: 20 DVKD-LGGSKEKPEEKTQGNGKKKDDEPQEEELSEEDQQLKSELEMLVERLQEPDTS--L 76
Query: 330 YAERLNKIKGIL----SGETSIQLTLQFLYSHNKSDLLIL 365
Y L+ IK + S T++ L+FL H DL L
Sbjct: 77 YGPALDAIKTFIKTSTSSMTAVPKPLKFLRPHY-DDLAAL 115
>TAIR|locus:2121358 [details] [associations]
symbol:RPN1B "26S proteasome regulatory subunit S2 1B"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0030163 EMBL:AL021749 EMBL:AL161572 GO:GO:0042176
UniGene:At.13247 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1 OMA:QWNINEG
ProtClustDB:CLSN2688277 EMBL:AY230829 IPI:IPI00657061 PIR:T04617
RefSeq:NP_194576.5 UniGene:At.32013 ProteinModelPortal:Q6XJG8
SMR:Q6XJG8 IntAct:Q6XJG8 STRING:Q6XJG8 PaxDb:Q6XJG8 PRIDE:Q6XJG8
EnsemblPlants:AT4G28470.1 GeneID:828964 KEGG:ath:AT4G28470
TAIR:At4g28470 InParanoid:Q6XJG8 PhylomeDB:Q6XJG8
Genevestigator:Q6XJG8 Uniprot:Q6XJG8
Length = 891
Score = 168 (64.2 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 73/305 (23%), Positives = 131/305 (42%)
Query: 528 AGISMGLLMVGTASEKAGEMLTYA----HETQ-HEKIIRGLALGIALTVYGREEEADTLI 582
A +S+G++ VG+ +E+ + + +A E + E + R L LG+ L G++E +
Sbjct: 523 AALSLGMIYVGSCNEEVAQSIIFALMDRSEAELGEALTRFLPLGLGLLYLGKQESVEATA 582
Query: 583 EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSD-VSDDVRR-TAVLALGFV 640
E + I +Y M L+ AY+GT N ++ LL V D+ + AV+ L V
Sbjct: 583 EVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQDLLAQCGEHLVKGDIHQGPAVIGLAMV 642
Query: 641 LYSEP---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDF 697
SE + R + + + ++R LA+G+ C + L L+ D
Sbjct: 643 AMSEELGLDMEIRSLERVLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSE 702
Query: 698 VRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGR 757
V A+I++ ++ N A R+ R L ++D +A G + G
Sbjct: 703 VAMAAIISLGLIGAGTNNA---RIAGMLRNLSSYY---YKDASLLFCVRIAQGFVHMGKG 756
Query: 758 NVTIR-------LLSKTKHDKITAVVG--LSVFSQFW--YWYPLIYFISLSFSPTALIGL 806
+T+ LLS T I ++ L + S Y Y ++YF+ L+ P ++ +
Sbjct: 757 LLTLNPFHSERLLLSPTALAGIVTLLHACLDMKSIILGKYHY-VLYFLVLAMQPRMMLTV 815
Query: 807 NYDLK 811
+ LK
Sbjct: 816 DQSLK 820
Score = 61 (26.5 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 298 QNDSSTAEDVQMNEGTPASNVNVQDEDPK-EVIYAERLNK-IKGILSGETSIQLTLQFLY 355
+ + + ED+Q+ + VQD +P+ + I E + K I+ S TS+ L+FL
Sbjct: 35 KEEDLSEEDLQLKQNLELYVERVQDPNPELQKIALESMRKEIRDSTSSMTSVPKPLKFLR 94
Query: 356 SH 357
H
Sbjct: 95 PH 96
Score = 53 (23.7 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 26/108 (24%), Positives = 53/108 (49%)
Query: 78 GELNDSLSYALGAGSLFDV-SEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLE 136
GE +SL+Y L GS D+ S +YV L + EY +I+ E ++++ ++
Sbjct: 131 GE-RESLNYRLN-GSESDIGSWGHEYVRNLAGEIAKEY-TIRQ------GEESSIEDLMD 181
Query: 137 AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSY 184
+V++++ + +A+ + ++ LD L E + + N T +Y
Sbjct: 182 -LVQQIVSFHMKHNAETEAVDLLMDVEDLDLLLEHVDNT-NFRRTCNY 227
Score = 50 (22.7 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 381 SATIYANAIMHAGTTVDTFLRENLDWLS-RATNW-------AKFSATAGLGVIHRGHLQQ 432
SAT + NA ++AG D + D S A NW K SA A LG+I ++
Sbjct: 371 SAT-FVNAFVNAGFGQDKLMTVPSDSTSGSAGNWLFKNKEHGKTSAVASLGMIQLWDVET 429
Query: 433 G 433
G
Sbjct: 430 G 430
Score = 43 (20.2 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 930 LEDSRYVPVKSAPSGFVLLRD 950
L +Y+P+ GFV+L++
Sbjct: 864 LATEKYIPLSPILEGFVILKE 884
>TAIR|locus:2046016 [details] [associations]
symbol:RPN1A "26S proteasome regulatory subunit S2 1A"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0030163 "protein catabolic process"
evidence=TAS] [GO:0051726 "regulation of cell cycle" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0043130 "ubiquitin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0051726 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
GO:GO:0043130 EMBL:AC007048 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:AY230828 EMBL:AF360216 EMBL:AY040061 EMBL:AK220903
IPI:IPI00529314 PIR:A84591 RefSeq:NP_565477.1 UniGene:At.22879
ProteinModelPortal:Q9SIV2 IntAct:Q9SIV2 STRING:Q9SIV2 PaxDb:Q9SIV2
PRIDE:Q9SIV2 EnsemblPlants:AT2G20580.1 GeneID:816580
KEGG:ath:AT2G20580 TAIR:At2g20580 InParanoid:Q9SIV2
PhylomeDB:Q9SIV2 ProtClustDB:CLSN2688277 Genevestigator:Q9SIV2
Uniprot:Q9SIV2
Length = 891
Score = 167 (63.8 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 73/306 (23%), Positives = 134/306 (43%)
Query: 528 AGISMGLLMVGTASEKAGEMLTYAHETQHEK-----IIRGLALGIALTVYGREEEADTLI 582
A +S+G++ VG+ +E+ + + +A + E + R L LG+ L G++E +
Sbjct: 523 ASLSLGMIYVGSCNEEVAQSIIFALMDRSEAELGDALTRFLPLGLGLLYLGKQESVEATA 582
Query: 583 EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSD-DVRR-TAVLALGFV 640
E + I +Y M L+ AY+GT N ++ LL + D+ + AVL L V
Sbjct: 583 EVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQDLLAQCGEHLEKGDIHQGPAVLGLAMV 642
Query: 641 LYSEP---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDF 697
SE + R + + + ++R LA+G+ C + L L+ D
Sbjct: 643 AMSEELGVDMEIRSLERMLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSE 702
Query: 698 VRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAI-LASGILDAGG 756
V A+I++ ++ N A R+ R L ++D MS + + +A G++ G
Sbjct: 703 VAMSAIISLGLIGAGTNNA---RIAGMLRNLSSYY---YKD-MSLLFCVRIAQGLVHMGK 755
Query: 757 RNVTIR-------LLSKTKHDKIT----AVVGLSVFSQFWYWYPLIYFISLSFSPTALIG 805
+T+ LLS T I A + + Y Y ++YF+ L+ P ++
Sbjct: 756 GLLTLSPFHSERFLLSPTALAGIVTLLHACLDMKPIILGKYHY-VLYFLVLAMQPRMMLT 814
Query: 806 LNYDLK 811
++ +LK
Sbjct: 815 VDENLK 820
Score = 57 (25.1 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 286 TVQPGSNDPPSA---QNDSSTAEDVQMNEGTPASNVNVQDEDP---KEVIYAERLNKIKG 339
T++ S DP +++ + ED+++ + VQD +P K + + R +I+
Sbjct: 20 TLKVPSKDPKKKDEKKDEDLSEEDLELKQNLELYVERVQDPNPELQKAALESMR-QEIRA 78
Query: 340 ILSGETSIQLTLQFLYSH 357
S TS+ L+FL H
Sbjct: 79 STSSMTSVPKPLKFLRPH 96
Score = 55 (24.4 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 78 GELNDSLSYALGAGSLFDV-SEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLE 136
GE +SL + L G+ D+ S +YV L + EY +S E A++D +E
Sbjct: 131 GE-RESLRFRL-IGTEGDIGSWGHEYVRNLAGEIAQEYTKRQS-------EEASIDDLME 181
Query: 137 AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSY 184
+V++++ + +A+ + ++ LD L E + ++ N T +Y
Sbjct: 182 -LVQQIVAFHMKHNAETEAVDLLMDVEDLDLLLEHVDKT-NFKRTCNY 227
Score = 55 (24.4 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 28/128 (21%), Positives = 55/128 (42%)
Query: 320 VQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDL----LILKTIKQSVEMR 375
V D+D +E + + +N K + G ++ ++ + + D+ L+ +
Sbjct: 307 VADDDDREALQ-DIVNNTK-LSEGYLTLARDIEVMEAKTPEDIYKAHLLDGRASSGASVD 364
Query: 376 NSVCHSATIYANAIMHAG------TTV--DTFLRENLDWLSRATNWAKFSATAGLGVIHR 427
++ + A + NA ++AG TV D+ + +WL + K SA A LG+I
Sbjct: 365 SARQNLAATFVNAFVNAGFGQDKLMTVPSDSTTGSSGNWLFKNKEHGKTSAAASLGMIQL 424
Query: 428 GHLQQGRS 435
+ G S
Sbjct: 425 WDVDSGLS 432
Score = 42 (19.8 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 930 LEDSRYVPVKSAPSGFVLLRD 950
L +Y+P+ GF++L++
Sbjct: 864 LATDKYIPLSPILEGFIILKE 884
Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 405 DWLSRATNWAKFSATAGLGVIHRGHLQ-QGRSLMAP 439
D++ + + + A GLG+ + G Q R+ ++P
Sbjct: 473 DYIDKEDSSVRIGAIMGLGISYAGSQNDQIRNKLSP 508
>DICTYBASE|DDB_G0293752 [details] [associations]
symbol:psmD2 "26S proteasome non-ATPase regulatory
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006972
"hyperosmotic response" evidence=IEP] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 dictyBase:DDB_G0293752
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234
GenomeReviews:CM000155_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0006972 GO:GO:0004175
GO:GO:0006511 GO:GO:0042176 EMBL:AAFI02000219 GO:GO:0005838
Pfam:PF01851 eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_628968.1 STRING:Q54BC6 PRIDE:Q54BC6
EnsemblProtists:DDB0232978 GeneID:8629396 KEGG:ddi:DDB_G0293752
OMA:QWNINEG ProtClustDB:CLSZ2429221 Uniprot:Q54BC6
Length = 893
Score = 160 (61.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 69/300 (23%), Positives = 126/300 (42%)
Query: 529 GISMGLLMVGTASEKAGEM----LTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQ 584
G+++GL+ +G+ + + L E R L LG+ L G+++ A+ +E
Sbjct: 522 GLALGLIFIGSCDPELSTLFVQTLIQRGTAASESHARFLHLGLGLLYLGKQDAAELALET 581
Query: 585 MTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSE 644
+ + Y + A AY+GT N ++ +LHF + AVL++ + E
Sbjct: 582 LKAIEGKGGEYARLTVEACAYAGTGNVLKVQNMLHFCSDGQENPHHGLAVLSIALIAMGE 641
Query: 645 P---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQG 701
+ R+ L + N H++ LA+G+ + +L L+ D V QG
Sbjct: 642 ELGSDMCLRMFDHLLQKGNVHIKRAIPLALGLLSPSNPRIAIMDILSKLSHDNDPEVAQG 701
Query: 702 ALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTI 761
A++++ ++ N A R+G R L + K + +A G+L G +TI
Sbjct: 702 AILSLGLIGAGTNNA---RIGGMLRALA-VFYGKD---VHLFFVRIAQGLLHLGKGTMTI 754
Query: 762 R-------LLSKTKHDKITAVV--GLSVFSQFWYWYPLIYF-ISLSFSPTALIGLNYDLK 811
L+S + A++ GL + + ++F I S P L+ L+ DLK
Sbjct: 755 NPYHSDRTLMSPVAVGGLLALLHAGLDIKNILSTQSHYLFFSIVCSMYPRMLMTLDEDLK 814
Score = 47 (21.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 298 QNDSSTAEDVQMNEGTPASNVNVQDEDPKEVIYA-ERLN-KIKGILSGETSIQLTLQFLY 355
+ ++ + ED ++ +DE + + A E L +I+ S TS+ L+FL
Sbjct: 51 KEETLSPEDEKLKNDLELLVERSRDEKEEIALAALEALKTEIRSSTSSMTSVPKPLKFLR 110
Query: 356 SHNKSDLLILKTIKQSVEMRNSVCHSATIYANA 388
+H + + I K K+ + + S+ ++ A A
Sbjct: 111 NHYSTLVDIYKNSKEG-KAKTSLADILSVLAMA 142
Score = 46 (21.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/111 (24%), Positives = 40/111 (36%)
Query: 290 GSNDPPSAQNDSSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQL 349
GSN +++ T E T N + +D KE + K+K L E ++
Sbjct: 15 GSNKEEDKKDNKDTEEKNTTTNTTTKDNKKDKKKDKKEETLSPEDEKLKNDL--ELLVER 72
Query: 350 TLQFLYSHNKSDLLILKT-IKQSVEMRNSVCHSATIYANAIMHAGTTVDTF 399
+ + L LKT I+ S SV N H T VD +
Sbjct: 73 SRDEKEEIALAALEALKTEIRSSTSSMTSVPKPLKFLRN---HYSTLVDIY 120
>FB|FBgn0028695 [details] [associations]
symbol:Rpn1 "Regulatory particle non-ATPase 1" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:AE014296 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008283 GO:GO:0006508 GO:GO:0050790
GO:GO:0004175 GO:GO:0042176 GO:GO:0000022 GO:GO:0008540
BRENDA:3.4.25.1 Pfam:PF01851 eggNOG:COG5110
GeneTree:ENSGT00550000074983 KO:K03028 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 CTD:6184 EMBL:AF132182 EMBL:AF145304
RefSeq:NP_649158.1 UniGene:Dm.3192 IntAct:Q9VW54 MINT:MINT-294744
STRING:Q9VW54 EnsemblMetazoa:FBtr0074893 GeneID:40174
KEGG:dme:Dmel_CG7762 UCSC:CG7762-RA FlyBase:FBgn0028695
InParanoid:Q9VW54 OrthoDB:EOG4R228T GenomeRNAi:40174 NextBio:817408
Uniprot:Q9VW54
Length = 919
Score = 90 (36.7 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 521 SAVAGEAAGI---SMGLLMVGTASEKAGEML--TYAHETQ---HEKIIRGLALGIALTVY 572
S+ + E GI S+GL+ VG+ + + E+L T T+ + R L LG+ L
Sbjct: 509 SSASVEILGITALSLGLISVGSCNSEITEILLQTIMGLTKADLKDTYTRFLFLGLGLLYL 568
Query: 573 GREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSD 624
GR++ + ++ + ++P AY+GT N I+QLLH SD
Sbjct: 569 GRQKSTEAVMMTLEVLEEPYRSMATTMVDICAYAGTGNVLKIQQLLHIC-SD 619
Score = 74 (31.1 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 323 EDPKEVIYAERLNKIKGILSGETSIQ--LTLQFLYSHNKSDLLILKTIKQSVEMRNSVCH 380
+D E++ LNK L+ E I T + +Y KS L ++ S+++ ++ +
Sbjct: 311 DDLMEIMSNANLNKHFLNLARELDIMEPKTPEDIY---KSHLDNSRSRFASIQVDSAKQN 367
Query: 381 SATIYANAIMHAGTTVDTFLRENLD-WLSRATNWAKFSATAGLGVI 425
A + N ++AG VD L E+ + WL + SATA LG+I
Sbjct: 368 LAASFVNGFVNAGFGVDKLLSEDGNKWLYKNKEHGMLSATASLGLI 413
Score = 69 (29.3 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 629 VRRTAVLALGFVLYSEPE-QTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLL 687
+RR LALG + S P+ +S S + V + A A+G+ AGT + S+L
Sbjct: 697 IRRAVPLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASML 756
Query: 688 EPL 690
L
Sbjct: 757 RQL 759
Score = 62 (26.9 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 27/99 (27%), Positives = 37/99 (37%)
Query: 633 AVLALGFVLYSEP---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEP 689
AVL + + E E R L P +R LA+G+ A I L
Sbjct: 664 AVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRAVPLALGLISASNPKLNIIDTLSK 723
Query: 690 LTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQL 728
+ D V A+ AM +V N A R+ + RQL
Sbjct: 724 FSHDSDAEVAHNAIFAMGLVGAGTNNA---RLASMLRQL 759
Score = 54 (24.1 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 95 DVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQ 154
D+ + D++H LL+ +DE A + + DP I+E L +Y Q
Sbjct: 202 DLLIEIDHLH-LLSDFVDESAYPRVCLYLQSCYPYVPDPDNTIILETALQLSRKFNQYTQ 260
Query: 155 AMGIAIECRRLDKLEE 170
AM +A+ +DK+ E
Sbjct: 261 AMRLALMLNDMDKIGE 276
Score = 40 (19.1 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 59 DQHQRQLAALLVSKVFYYLGELNDSLSY 86
++ RQL A ++S + +G D L+Y
Sbjct: 113 NEQARQLCADIISVLSMTMGSGKDCLAY 140
>WB|WBGene00004458 [details] [associations]
symbol:rpn-1 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0000003
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 EMBL:FO080211
Pfam:PF01851 eggNOG:COG5110 GeneTree:ENSGT00550000074983
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
PIR:T32707 RefSeq:NP_501064.1 ProteinModelPortal:Q9GZH5
IntAct:Q9GZH5 MINT:MINT-210711 STRING:Q9GZH5 PaxDb:Q9GZH5
EnsemblMetazoa:T22D1.9.1 EnsemblMetazoa:T22D1.9.2 GeneID:177455
KEGG:cel:CELE_T22D1.9 UCSC:T22D1.9.1 CTD:177455 WormBase:T22D1.9
InParanoid:Q9GZH5 NextBio:896900 Uniprot:Q9GZH5
Length = 981
Score = 131 (51.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 37/100 (37%), Positives = 58/100 (58%)
Query: 528 AGISMGLLMVGTA-SEKAGEMLTYAHETQHEKI----IRGLALGIALTVYGREEEADTLI 582
AG+S+GL++VGTA +E A EML + ++ +R LALGIAL ++++D +
Sbjct: 516 AGLSLGLILVGTADAEAAMEMLQALMDKSETELTDPNMRFLALGIALIFLQTQDKSDVFV 575
Query: 583 EQMTRDQDPILRYGGMYALAL---AYSGTANNKAIRQLLH 619
E + DP +G M + + AY+GT N I++LLH
Sbjct: 576 ESLRSLPDP---FGAMVSTLVEVCAYAGTGNVLKIQKLLH 612
Score = 64 (27.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 629 VRRTAVLALGFVLYSEPE-QTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLL 687
+RR LAL + S P+ +S S + + A A+G+ AGT + +++L
Sbjct: 745 IRRAVPLALSLLSVSNPQLNILETLSKFSHDSDADTAHNAIFAMGLVGAGTNNARLVAML 804
Query: 688 EPLTS 692
L S
Sbjct: 805 RNLAS 809
Score = 49 (22.3 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 359 KSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLD---WLSRATNWAK 415
KS L + S + ++ + A N ++ G VD + E + W + +
Sbjct: 336 KSHLEHSRPFGNSAQPDSTRMNLAAALVNGFVNCGFGVDKMMAETEEASRWFYKNKEYGM 395
Query: 416 FSATAGLGVIHRGHLQQG 433
+A A G+I R + G
Sbjct: 396 LTAAASQGLIWRWDIDTG 413
>CGD|CAL0006334 [details] [associations]
symbol:RPN1 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 CGD:CAL0006334
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 EMBL:AACQ01000010 GO:GO:0042176 Pfam:PF01851
eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1 RefSeq:XP_722167.1
STRING:Q5AL21 GeneID:3636147 KEGG:cal:CaO19.4956 Uniprot:Q5AL21
Length = 994
Score = 130 (50.8 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 56/262 (21%), Positives = 107/262 (40%)
Query: 382 ATIYANAIMHAGTTVDTFLR---ENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMA 438
A + N ++ G D ++ +N W+ R S TA LG IH+ ++ +G ++
Sbjct: 371 AASFVNGFLNLGFGNDKLVQTEEDNKSWIYRTKGSGMASTTASLGSIHQWNINEGLQVL- 429
Query: 439 PXXXXXXXXXXXXXXXXXXXXYALGLIHAN-HGEGIKQF--LRDSLRSTNVEVIQHXXXX 495
G++ AN H E F L++ + N ++ Q
Sbjct: 430 -----DKYTYSEDSEVKAGALLGTGVVSANVHDEVDAAFALLQEYVHEPN-KLYQTAAIN 483
Query: 496 XXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEA---AGISMGLLMVGTA-SEKAGEMLTYA 551
+ED+ + + L +D ++ E A +++G + VGT + +L
Sbjct: 484 GLGIAFAGSANEDVLN-LLLPLVSDLDISLEISCLAALALGHIFVGTCHGDVTSTILQTL 542
Query: 552 HETQH----EKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSG 607
E + K I+ ++LG+ L GR E+A+ ++E + + PI + + A++G
Sbjct: 543 LERDYTQLTNKFIKFMSLGLGLLYMGRTEQAEDVLETIDAIEHPISKTLKVLVNICAFAG 602
Query: 608 TANNKAIRQLLHFAVSDVSDDV 629
T N I+ LL + D +
Sbjct: 603 TGNVLQIQALLQMCTAKPKDQL 624
Score = 63 (27.2 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 49/221 (22%), Positives = 86/221 (38%)
Query: 633 AVLALGFVLYSEP---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEP 689
AVL L + E + + R L N +R LA+G+ + L
Sbjct: 730 AVLGLACIAMGEDIGQDMSLRHFGHLMHYGNSLIRRAVPLAMGLVSTSNPQMKVFETLSR 789
Query: 690 LTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILAS 749
+ D V Q ++ +M +V N A R+ RQL + K DT+ + +A
Sbjct: 790 YSHDPDLEVAQNSIYSMGLVGAGTNNA---RLAQLLRQLASYYI-KSPDTLFMVR--IAQ 843
Query: 750 GILDAGGRNVTIR-------LLSKTK-HDKITAVVGLSVFSQFWY-------WYPLIYFI 794
GIL G +T+ +LSK +T + L F + L+Y++
Sbjct: 844 GILHLGKGTLTLTPYNSERTILSKVSLASLLTIAIALLDPRSFILNDSTTETTHQLLYYL 903
Query: 795 SLSFSPTALIGLNYDLKVPRFEF-LSHAKPSLFEYPKPTTV 834
+ + P L+ ++ +LK + + A + + KP T+
Sbjct: 904 TPAVKPRMLVTVDEELKPIKVNVRVGQAVDVVGQAGKPKTI 944
Score = 37 (18.1 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 120 KAAESNDEAANVDPRLEAIVERM 142
K E ++E ++ LE +VER+
Sbjct: 32 KEEELSEEDQHLKDELELLVERL 54
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1003 896 0.00087 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 616 (65 KB)
Total size of DFA: 383 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 75.19u 0.12s 75.31t Elapsed: 00:00:04
Total cpu time: 75.21u 0.12s 75.33t Elapsed: 00:00:04
Start: Tue May 21 06:32:01 2013 End: Tue May 21 06:32:05 2013