Query 001859
Match_columns 1003
No_of_seqs 295 out of 795
Neff 5.8
Searched_HMMs 13730
Date Tue Mar 26 17:03:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001859.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1154-1158//hhsearch_scop/001859hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oyza_ a.118.1.16 (A:) Hypoth 99.6 1.6E-12 1.2E-16 96.5 21.0 220 474-710 21-245 (276)
2 d1oyza_ a.118.1.16 (A:) Hypoth 99.5 5.8E-11 4.3E-15 86.3 25.2 246 437-707 24-274 (276)
3 d1b3ua_ a.118.1.2 (A:) Constan 99.3 7.9E-10 5.7E-14 78.9 20.5 165 586-755 411-588 (588)
4 d1b3ua_ a.118.1.2 (A:) Constan 99.3 1.6E-09 1.2E-13 76.9 21.2 259 451-711 294-587 (588)
5 d2vglb_ a.118.1.10 (B:) Adapti 99.2 1.7E-07 1.3E-11 63.6 27.9 96 10-112 13-108 (579)
6 d1u6gc_ a.118.1.2 (C:) Cullin- 98.9 1.8E-06 1.3E-10 56.9 36.7 69 10-80 6-79 (1207)
7 d1q1sc_ a.118.1.1 (C:) Importi 98.8 2.2E-06 1.6E-10 56.3 21.2 87 623-710 282-385 (434)
8 d2vglb_ a.118.1.10 (B:) Adapti 98.7 1.3E-05 9.2E-10 51.4 25.5 129 624-756 398-531 (579)
9 d1te4a_ a.118.1.16 (A:) MTH187 98.7 1.1E-08 8E-13 71.4 4.8 108 587-707 2-109 (111)
10 d1qbkb_ a.118.1.1 (B:) Karyoph 98.6 2.5E-05 1.8E-09 49.5 26.8 110 648-757 666-781 (888)
11 d1jdha_ a.118.1.1 (A:) beta-Ca 98.4 6.7E-05 4.9E-09 46.6 24.9 65 684-752 462-528 (529)
12 d1te4a_ a.118.1.16 (A:) MTH187 98.3 1.5E-07 1.1E-11 64.0 3.6 108 623-750 2-109 (111)
13 d1wa5b_ a.118.1.1 (B:) Karyoph 98.3 9.9E-05 7.2E-09 45.5 20.5 49 452-501 134-190 (503)
14 d1q1sc_ a.118.1.1 (C:) Importi 98.2 0.0002 1.5E-08 43.5 21.9 10 489-498 246-255 (434)
15 d1u6gc_ a.118.1.2 (C:) Cullin- 98.2 0.0002 1.5E-08 43.5 42.6 31 9-39 47-77 (1207)
16 d2vgla_ a.118.1.10 (A:) Adapti 98.1 0.00014 1.1E-08 44.4 14.4 70 133-213 98-171 (584)
17 d1wa5b_ a.118.1.1 (B:) Karyoph 98.0 0.00041 3E-08 41.5 25.4 17 657-673 382-398 (503)
18 d1xqra1 a.118.1.21 (A:87-350) 97.9 0.00011 7.8E-09 45.3 11.4 58 656-713 153-217 (264)
19 d1qbkb_ a.118.1.1 (B:) Karyoph 97.9 0.00063 4.6E-08 40.3 21.7 333 409-745 405-811 (888)
20 d1xqra1 a.118.1.21 (A:87-350) 97.8 0.00039 2.8E-08 41.6 12.3 67 614-684 146-221 (264)
21 d1jdha_ a.118.1.1 (A:) beta-Ca 97.8 0.001 7.6E-08 38.8 26.7 62 647-709 461-528 (529)
22 d2bpta1 a.118.1.1 (A:1-861) Im 97.5 0.0023 1.7E-07 36.6 37.9 122 612-733 597-733 (861)
23 d1lsha1 a.118.4.1 (A:285-620) 97.4 0.0032 2.3E-07 35.6 16.7 89 610-701 201-298 (336)
24 d2vgla_ a.118.1.10 (A:) Adapti 97.3 0.0046 3.3E-07 34.6 25.5 130 582-714 366-504 (584)
25 d1lrva_ a.118.1.5 (A:) Leucine 97.1 4.8E-05 3.5E-09 47.6 0.6 178 451-703 53-230 (233)
26 d1lrva_ a.118.1.5 (A:) Leucine 97.0 3.9E-05 2.8E-09 48.2 -0.4 183 478-746 48-230 (233)
27 d1ibrb_ a.118.1.1 (B:) Importi 96.8 0.012 9E-07 31.8 23.9 58 654-711 372-436 (458)
28 d1ibrb_ a.118.1.1 (B:) Importi 96.7 0.015 1.1E-06 31.3 23.0 60 11-73 4-63 (458)
29 d1xm9a1 a.118.1.24 (A:244-700) 95.7 0.046 3.4E-06 28.0 10.9 65 10-76 5-74 (457)
30 d1lsha1 a.118.4.1 (A:285-620) 95.6 0.053 3.8E-06 27.7 22.1 77 626-705 185-269 (336)
31 d1qgra_ a.118.1.1 (A:) Importi 93.0 0.19 1.4E-05 24.0 38.8 58 11-71 5-62 (876)
32 d1xm9a1 a.118.1.24 (A:244-700) 92.3 0.24 1.7E-05 23.4 27.9 33 46-80 4-36 (457)
33 d2bpta1 a.118.1.1 (A:1-861) Im 91.3 0.31 2.2E-05 22.6 43.1 100 10-116 7-124 (861)
34 d2b6ca1 a.118.1.17 (A:3-215) H 73.0 1.8 0.00013 17.6 15.4 78 636-715 109-187 (213)
35 d1b89a_ a.118.1.3 (A:) Clathri 67.4 2.4 0.00018 16.8 4.0 87 164-268 1-87 (336)
36 d1hz4a_ a.118.8.2 (A:) Transcr 38.2 7.2 0.00052 13.7 21.9 18 70-87 18-35 (366)
No 1
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=99.56 E-value=1.6e-12 Score=96.46 Aligned_cols=220 Identities=14% Similarity=0.098 Sum_probs=96.1
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH--HHHHHH
Q ss_conf 999985301598056899999999998448999879999998531798455899999975666179845899--999986
Q 001859 474 KQFLRDSLRSTNVEVIQHGACLGLGLAALGTADEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAG--EMLTYA 551 (1003)
Q Consensus 474 l~~L~~~L~~~~~~~vr~GA~LGLGla~~Gt~~e~v~e~L~~~L~~Ds~~~~e~AalaLGLI~~Gs~n~~v~--~LL~~~ 551 (1003)
...|.+.|++ .+..+|..|+.+||.. | +++++..|...+...+..++..|+.+||-+.......... .++..+
T Consensus 21 ~~~L~~~L~d-~~~~vR~~A~~~L~~~--~--~~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~~~~~~~l~~~~ 95 (276)
T d1oyza_ 21 DDELFRLLDD-HNSLKRISSARVLQLR--G--GQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMA 95 (276)
T ss_dssp HHHHHHHTTC-SSHHHHHHHHHHHHHH--C--CHHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHCC-CCHHHHHHHHHHHHHH--C--CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 9999988469-9999999999999861--8--873999999998099989999999999872022121202299999998
Q ss_pred HHCCCHHHHHHHHHHHHHHCCCCHHHH---HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf 312863588899998757216892359---99999982299814577899999986517887999999999983298825
Q 001859 552 HETQHEKIIRGLALGIALTVYGREEEA---DTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDD 628 (1003)
Q Consensus 552 ~et~~e~i~r~~algLgLi~~G~~e~a---~~lie~L~~~~d~i~R~~a~~alglAyaGTGn~~aI~~LL~~~vsd~~dd 628 (1003)
.+..+..+++.++.+|+-+.-+..... -..+.....++++.+|+.++.+++ ..++..++..++... .+.+..
T Consensus 96 l~d~~~~vr~~a~~aL~~~~~~~~~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~----~~~~~~~~~~l~~l~-~~~~~~ 170 (276)
T d1oyza_ 96 LNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAIS----VINDKATIPLLINLL-KDPNGD 170 (276)
T ss_dssp HHCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHH----TC---CCHHHHHHHH-TCSSHH
T ss_pred HCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH----HCCHHHHHHHHHHHC-CCCCCH
T ss_conf 669976689999999998702462101899999999864720489999999874----102388999988740-466401
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 89799999843217998876899999751089103688999998873489938899987000489806799899999999
Q 001859 629 VRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAM 708 (1003)
Q Consensus 629 vrr~AvlaLGlI~~g~~e~v~~li~~L~~s~np~VR~gaalALGla~aGtg~~~aI~lL~~l~~D~dd~Vrq~AiiALGl 708 (1003)
+++.+..+++.+..+.+...+.++. .....++.+|..+..+++.. +...++..|...+.|+ .||..|+-+||.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~al~~~----~~~~~~~~L~~~l~d~--~vr~~a~~aL~~ 243 (276)
T d1oyza_ 171 VRNWAAFAININKYDNSDIRDCFVE-MLQDKNEEVRIEAIIGLSYR----KDKRVLSVLCDELKKN--TVYDDIIEAAGE 243 (276)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHH-HTTCSCHHHHHHHHHHHHHT----TCGGGHHHHHHHHTSS--SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCHH----HHHHHHHHHHHHHCCH--HHHHHHHHHHHH
T ss_conf 1135777877651021113316666-41100001233320010000----0000499999995795--999999999987
Q ss_pred HH
Q ss_conf 85
Q 001859 709 VM 710 (1003)
Q Consensus 709 I~ 710 (1003)
++
T Consensus 244 ig 245 (276)
T d1oyza_ 244 LG 245 (276)
T ss_dssp HC
T ss_pred CC
T ss_conf 59
No 2
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=99.50 E-value=5.8e-11 Score=86.30 Aligned_cols=246 Identities=15% Similarity=0.127 Sum_probs=174.1
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCH-HHHHHHHH
Q ss_conf 13666689999999987203489997653126617699999853015980568999999999984489998-79999998
Q 001859 437 MAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHGACLGLGLAALGTADE-DIYDDIKN 515 (1003)
Q Consensus 437 L~~yL~~~~~~~~~~~~~k~GAl~ALGLI~~g~~~~al~~L~~~L~~~~~~~vr~GA~LGLGla~~Gt~~e-~v~e~L~~ 515 (1003)
|.+.|.. .++.+|..|+.+||.+.. +.++..|...+++ .+..+|..|+.+||........+ .+...|..
T Consensus 24 L~~~L~d------~~~~vR~~A~~~L~~~~~---~~~~~~l~~~l~d-~~~~vr~~a~~aL~~l~~~~~~~~~~~~~l~~ 93 (276)
T d1oyza_ 24 LFRLLDD------HNSLKRISSARVLQLRGG---QDAVRLAIEFCSD-KNYIRRDIGAFILGQIKICKKCEDNVFNILNN 93 (276)
T ss_dssp HHHHTTC------SSHHHHHHHHHHHHHHCC---HHHHHHHHHHHTC-SSHHHHHHHHHHHHHSCCCTTTHHHHHHHHHH
T ss_pred HHHHHCC------CCHHHHHHHHHHHHHHCC---HHHHHHHHHHHCC-CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 9988469------999999999999986188---7399999999809-99899999999998720221212022999999
Q ss_pred H-HCCCCHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf 5-31798455899999975666179845--89999998631286358889999875721689235999999982299814
Q 001859 516 V-LYTDSAVAGEAAGISMGLLMVGTASE--KAGEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPI 592 (1003)
Q Consensus 516 ~-L~~Ds~~~~e~AalaLGLI~~Gs~n~--~v~~LL~~~~et~~e~i~r~~algLgLi~~G~~e~a~~lie~L~~~~d~i 592 (1003)
. +..++..++..|..+||-+.-+.... .++..+.......+..+++.++.+++ .++.+.....++..+. ..++.
T Consensus 94 ~~l~d~~~~vr~~a~~aL~~~~~~~~~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~--~~~~~~~~~~l~~l~~-~~~~~ 170 (276)
T d1oyza_ 94 MALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAIS--VINDKATIPLLINLLK-DPNGD 170 (276)
T ss_dssp HHHHCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHH--TC---CCHHHHHHHHT-CSSHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--HCCHHHHHHHHHHHCC-CCCCH
T ss_conf 98669976689999999998702462101899999999864720489999999874--1023889999887404-66401
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 57789999998651788799999999998329882589799999843217998876899999751089103688999998
Q 001859 593 LRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVG 672 (1003)
Q Consensus 593 ~R~~a~~alglAyaGTGn~~aI~~LL~~~vsd~~ddvrr~AvlaLGlI~~g~~e~v~~li~~L~~s~np~VR~gaalALG 672 (1003)
.+..+..+++. ...++...+..++.. ..+.+..++..++.+++.+ +.++.++.+++.+. ++.||..++.+||
T Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~~~--~~~~~~~~L~~~l~---d~~vr~~a~~aL~ 242 (276)
T d1oyza_ 171 VRNWAAFAINI--NKYDNSDIRDCFVEM-LQDKNEEVRIEAIIGLSYR--KDKRVLSVLCDELK---KNTVYDDIIEAAG 242 (276)
T ss_dssp HHHHHHHHHHH--HTCCCHHHHHHHHHH-TTCSCHHHHHHHHHHHHHT--TCGGGHHHHHHHHT---SSSCCHHHHHHHH
T ss_pred HHHHHHHHHHH--HHCCCCCCCHHHHHH-HHHHHHHHHHHHCCCCCHH--HHHHHHHHHHHHHC---CHHHHHHHHHHHH
T ss_conf 11357778776--510211133166664-1100001233320010000--00004999999957---9599999999998
Q ss_pred HHHCCCCCHHHHHHHHHHCC-CCHHHHHHHHHHHHH
Q ss_conf 87348993889998700048-980679989999999
Q 001859 673 ISCAGTGLSEAISLLEPLTS-DVVDFVRQGALIAMA 707 (1003)
Q Consensus 673 la~aGtg~~~aI~lL~~l~~-D~dd~Vrq~AiiALG 707 (1003)
-+ |++.++..|..++. +.+..||+.|+-+|.
T Consensus 243 ~i----g~~~~~~~L~~~l~~~~d~~vr~~A~~~L~ 274 (276)
T d1oyza_ 243 EL----GDKTLLPVLDTMLYKFDDNEIITSAIDKLK 274 (276)
T ss_dssp HH----CCGGGHHHHHHHHTTSSCCHHHHHHHHHHT
T ss_pred HC----CCHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf 75----998799999999804999999999999970
No 3
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=7.9e-10 Score=78.90 Aligned_cols=165 Identities=16% Similarity=0.100 Sum_probs=104.4
Q ss_pred HCCCCHHHHHHHHHHHHHHH--CCCCC-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--CCCCC---HHHHHHHHHH
Q ss_conf 22998145778999999865--17887-99999999998329882589799999843217--99887---6899999751
Q 001859 586 TRDQDPILRYGGMYALALAY--SGTAN-NKAIRQLLHFAVSDVSDDVRRTAVLALGFVLY--SEPEQ---TPRIVSLLSE 657 (1003)
Q Consensus 586 ~~~~d~i~R~~a~~alglAy--aGTGn-~~aI~~LL~~~vsd~~ddvrr~AvlaLGlI~~--g~~e~---v~~li~~L~~ 657 (1003)
..+.++-+|..++-.++... .|... ...+..++..+..|....||..|+-+||.+.- |.... +...+..+..
T Consensus 411 ~~d~~~~~r~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~~ 490 (588)
T d1b3ua_ 411 AEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSG 490 (588)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTTT
T ss_pred HHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 84335889999999999999771847677888888776356874168999999999999983938789999999999865
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCC----HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHHH
Q ss_conf 08910368899999887348993----889998700048980679989999999985036644564199-9999999998
Q 001859 658 SYNPHVRYGAALAVGISCAGTGL----SEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVG-TFRRQLEKII 732 (1003)
Q Consensus 658 s~np~VR~gaalALGla~aGtg~----~~aI~lL~~l~~D~dd~Vrq~AiiALGlI~~g~~~a~~pkv~-~~lr~L~~~~ 732 (1003)
+.+..+|.+++.+++.+...-+. ...+..|..+.+|++..||.+|+-+|+.++..-++.. +. .+...+.+..
T Consensus 491 ~~~~~~R~~~~~~l~~l~~~~~~~~~~~~ilp~ll~~~~D~v~nVR~~a~~~l~~i~~~~~~~~---~~~~i~~~l~~L~ 567 (588)
T d1b3ua_ 491 DPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNST---LQSEVKPILEKLT 567 (588)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSCHHH---HHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHC
T ss_conf 9987899999999999999869687899999999988599987999999999999998708075---7999999999975
Q ss_pred HHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 62038924698889976422069
Q 001859 733 LDKHEDTMSKMGAILASGILDAG 755 (1003)
Q Consensus 733 ~~~~~d~~~rfga~lAlGLl~aG 755 (1003)
.+.|..+|+.|.-|+..+-.|
T Consensus 568 --~D~d~dVr~~A~~al~~l~~~ 588 (588)
T d1b3ua_ 568 --QDQDVDVKYFAQEALTVLSLA 588 (588)
T ss_dssp --TCSSHHHHHHHHHHHHHTTCC
T ss_pred --CCCCHHHHHHHHHHHHHHHCC
T ss_conf --799877999999999987449
No 4
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.6e-09 Score=76.86 Aligned_cols=259 Identities=13% Similarity=0.036 Sum_probs=138.2
Q ss_pred CCCCHHHHHHHHHHHHCCCH---------HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH----HHH
Q ss_conf 98720348999765312661---------76999998530159805689999999999844899987999999----853
Q 001859 451 SPYSEGGALYALGLIHANHG---------EGIKQFLRDSLRSTNVEVIQHGACLGLGLAALGTADEDIYDDIK----NVL 517 (1003)
Q Consensus 451 ~~~~k~GAl~ALGLI~~g~~---------~~al~~L~~~L~~~~~~~vr~GA~LGLGla~~Gt~~e~v~e~L~----~~L 517 (1003)
+..++..|+.+++-+....+ +..+..+...+.+ .+..+|..++..++.+....+++...+.+. ..+
T Consensus 294 ~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d-~~~~vr~~~~~~l~~~~~~~~~~~~~~~l~p~l~~~l 372 (588)
T d1b3ua_ 294 EAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSD-ANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQL 372 (588)
T ss_dssp SHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTC-SCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 357779999879999998766554332199998888876138-8767899999988655430131678888888899998
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHH-HHHHH---HHHCCCHHHHHHHHHHHHHH--CCCCH---HHHHHHHHHHHCC
Q ss_conf 1798455899999975666179845899-99998---63128635888999987572--16892---3599999998229
Q 001859 518 YTDSAVAGEAAGISMGLLMVGTASEKAG-EMLTY---AHETQHEKIIRGLALGIALT--VYGRE---EEADTLIEQMTRD 588 (1003)
Q Consensus 518 ~~Ds~~~~e~AalaLGLI~~Gs~n~~v~-~LL~~---~~et~~e~i~r~~algLgLi--~~G~~---e~a~~lie~L~~~ 588 (1003)
..++...+..+..+++-+.--.+..... .++.. ..+..+..++..++..++.+ .+|.+ +....++..+..+
T Consensus 373 ~d~~~~v~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~D 452 (588)
T d1b3ua_ 373 KDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVD 452 (588)
T ss_dssp TCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf 75102222677888888875003134436778999999843358899999999999997718476778888887763568
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH---HCCCCHHHHHHHHHHHHHHCCC--C----CCCHHHHHHHHHHCC
Q ss_conf 981457789999998651788799999999998---3298825897999998432179--9----887689999975108
Q 001859 589 QDPILRYGGMYALALAYSGTANNKAIRQLLHFA---VSDVSDDVRRTAVLALGFVLYS--E----PEQTPRIVSLLSESY 659 (1003)
Q Consensus 589 ~d~i~R~~a~~alglAyaGTGn~~aI~~LL~~~---vsd~~ddvrr~AvlaLGlI~~g--~----~e~v~~li~~L~~s~ 659 (1003)
+..-+|..++-+++......|...+...++... ..+.+..+|..++.+++.+.-. . ++..|. +..++.+.
T Consensus 453 ~~~~VR~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~~~~~~~~~~ilp~-ll~~~~D~ 531 (588)
T d1b3ua_ 453 HVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPT-VLRMAGDP 531 (588)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH-HHHGGGCS
T ss_pred CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHCCCC
T ss_conf 74168999999999999983938789999999999865998789999999999999986968789999999-99885999
Q ss_pred CCHHHHHHHHHHHHHHCCCCC----HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 910368899999887348993----8899987000489806799899999999850
Q 001859 660 NPHVRYGAALAVGISCAGTGL----SEAISLLEPLTSDVVDFVRQGALIAMAMVMV 711 (1003)
Q Consensus 660 np~VR~gaalALGla~aGtg~----~~aI~lL~~l~~D~dd~Vrq~AiiALGlI~~ 711 (1003)
.|.||.+++-+++.++.--++ ..+..+|..+.+|+|.+||..|--|+..+..
T Consensus 532 v~nVR~~a~~~l~~i~~~~~~~~~~~~i~~~l~~L~~D~d~dVr~~A~~al~~l~~ 587 (588)
T d1b3ua_ 532 VANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVLSL 587 (588)
T ss_dssp CHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_conf 87999999999999998708075799999999997579987799999999998744
No 5
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=1.7e-07 Score=63.55 Aligned_cols=96 Identities=14% Similarity=0.157 Sum_probs=49.2
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 88976305899647799999999989755367430187999986036889888999999998871335891457987761
Q 001859 10 GGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALG 89 (1003)
Q Consensus 10 ~~~l~lL~e~d~~l~~~AL~~L~~~v~~~w~ei~~~~~~ie~lyed~~f~~~~r~laA~v~Skvy~~lg~~~~sL~yaL~ 89 (1003)
+-+-..|+.++..-+.-|++++....-.- ..++..++.+-.+.....+. .|++..+-++...-. ..|.+..+..
T Consensus 13 ~eir~~L~s~~~~~r~~al~kli~~~~~G-~d~s~l~~~vi~~~~s~d~~--~Kkl~yl~l~~~~~~---~~d~~~l~in 86 (579)
T d2vglb_ 13 FELKAELNNEKKEKRKEAVKKVIAAMTVG-KDVSSLFPDVVNCMQTDNLE--LKKLVYLYLMNYAKS---QPDMAIMAVN 86 (579)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHTT-CCCGGGHHHHHHTTSSSCHH--HHHHHHHHHHHHHHH---SHHHHHTTHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHCCCCHH--HHHHHHHHHHHHCCC---CCCHHHHHHH
T ss_conf 99999866999899999999999999779-98405899999781899999--999999999996767---8529999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 49988999984589999999999
Q 001859 90 AGSLFDVSEDSDYVHTLLAKAID 112 (1003)
Q Consensus 90 ag~~fd~~~~~eYv~tl~~~~id 112 (1003)
+ =.-|+.+.++++|.++-+++.
T Consensus 87 t-l~kDl~d~n~~iR~lALr~L~ 108 (579)
T d2vglb_ 87 S-FVKDCEDPNPLIRALAVRTMG 108 (579)
T ss_dssp H-HGGGSSSSSHHHHHHHHHHHH
T ss_pred H-HHHHCCCCCHHHHHHHHHHHH
T ss_conf 9-998869999999999999987
No 6
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=1.8e-06 Score=56.86 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=36.6
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH-----HHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 889763058996477999999999897553674-----30187999986036889888999999998871335891
Q 001859 10 GGLLAMLNESHPSLKLHALSNLNSFVDQFWPEI-----STSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGEL 80 (1003)
Q Consensus 10 ~~~l~lL~e~d~~l~~~AL~~L~~~v~~~w~ei-----~~~~~~ie~lyed~~f~~~~r~laA~v~Skvy~~lg~~ 80 (1003)
+.+|.-+.++|++++.-|+..|...+...+... +.-++.+-.+.+|.. ++-|.+|.--+..+.-++.++
T Consensus 6 ~~ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~~L~D~~--~~Vq~~A~k~l~~l~~~~~~~ 79 (1207)
T d1u6gc_ 6 SNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKN--GEVQNLAVKCLGPLVSKVKEY 79 (1207)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSS--HHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHCCHH
T ss_conf 99998667988729999999999987230144576889999999999967998--799999999999999767686
No 7
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.84 E-value=2.2e-06 Score=56.28 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=49.6
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCC---------CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH--------HHH
Q ss_conf 29882589799999843217998---------8768999997510891036889999988734899388--------999
Q 001859 623 SDVSDDVRRTAVLALGFVLYSEP---------EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSE--------AIS 685 (1003)
Q Consensus 623 sd~~ddvrr~AvlaLGlI~~g~~---------e~v~~li~~L~~s~np~VR~gaalALGla~aGtg~~~--------aI~ 685 (1003)
++.++++++.++..|+-++...+ ..++.++..+ .+.++.+|..++.+++-...+..... +++
T Consensus 282 ~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l-~~~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~ 360 (434)
T d1q1sc_ 282 TNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVL-SKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIE 360 (434)
T ss_dssp TCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHH-HSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH
T ss_conf 364146668888788652004504577776654689999877-5158688999999999998349999999999897699
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8700048980679989999999985
Q 001859 686 LLEPLTSDVVDFVRQGALIAMAMVM 710 (1003)
Q Consensus 686 lL~~l~~D~dd~Vrq~AiiALGlI~ 710 (1003)
.|..++...+..++..++-++.-++
T Consensus 361 ~L~~ll~~~d~~~~~~~l~~l~~ll 385 (434)
T d1q1sc_ 361 PLMNLLSAKDTKIIQVILDAISNIF 385 (434)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 9999865999899999999999999
No 8
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.67 E-value=1.3e-05 Score=51.38 Aligned_cols=129 Identities=11% Similarity=0.078 Sum_probs=60.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCC----CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHCCCCHHHH
Q ss_conf 9882589799999843217998----87689999975108910368899999887348993-889998700048980679
Q 001859 624 DVSDDVRRTAVLALGFVLYSEP----EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL-SEAISLLEPLTSDVVDFV 698 (1003)
Q Consensus 624 d~~ddvrr~AvlaLGlI~~g~~----e~v~~li~~L~~s~np~VR~gaalALGla~aGtg~-~~aI~lL~~l~~D~dd~V 698 (1003)
+..+.++..++..+.-+.-..| ..++.+.+.+....+|.+|.+++..+|--+--..+ .+.++.|.....|.+..|
T Consensus 398 ~~~~~v~~e~i~~i~~i~~~~p~~~~~ii~~L~~~l~~~~~~~~~~~~iwilGEy~~~i~~~~~ll~~l~~~f~~e~~~v 477 (579)
T d2vglb_ 398 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV 477 (579)
T ss_dssp TCCHHHHHHHHHHHHHHHHHSCSSCCTTHHHHHHTTTTCCSHHHHHHHHHHHHTTCTTCTTHHHHHHHHSTTCSSSCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
T ss_conf 88556899999999999996968899999999988875475789999998983765444667999999998662099999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9899999999850366445641999999999998620389246988899764220699
Q 001859 699 RQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGG 756 (1003)
Q Consensus 699 rq~AiiALGlI~~g~~~a~~pkv~~~lr~L~~~~~~~~~d~~~rfga~lAlGLl~aGg 756 (1003)
|...+-|+..+....+.. ...++...-+...+...++..|..+.+-..++....
T Consensus 478 q~~iLta~~Kl~~~~p~~----~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (579)
T d2vglb_ 478 QLTLLTAIVKLFLKKPSE----TQELVQQVLSXXXXXXXXXXXXXXXXXXXXXXXXXX 531 (579)
T ss_dssp HHHHHHHHHHHHTTCCST----THHHHHHHHHHHHTTCCCHHHHHHHHHHHTTTTTCT
T ss_pred HHHHHHHHHHHHHCCCHH----HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999519678----899999998544222100000000000000000000
No 9
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.66 E-value=1.1e-08 Score=71.42 Aligned_cols=108 Identities=24% Similarity=0.275 Sum_probs=84.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH
Q ss_conf 29981457789999998651788799999999998329882589799999843217998876899999751089103688
Q 001859 587 RDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYG 666 (1003)
Q Consensus 587 ~~~d~i~R~~a~~alglAyaGTGn~~aI~~LL~~~vsd~~ddvrr~AvlaLGlI~~g~~e~v~~li~~L~~s~np~VR~g 666 (1003)
.++|+.+|..++.++| ..|. .++..|+.. .++.+..||+.|+.+||.+ +.++.++.++..| ++.+|.||+.
T Consensus 2 ~D~~~~VR~~A~~aL~--~~~~---~~~~~L~~~-l~d~~~~vR~~a~~~L~~~--~~~~~~~~L~~~l-~d~~~~VR~~ 72 (111)
T d1te4a_ 2 ADENKWVRRDVSTALS--RMGD---EAFEPLLES-LSNEDWRIRGAAAWIIGNF--QDERAVEPLIKLL-EDDSGFVRSG 72 (111)
T ss_dssp CSSCCCSSSSCCSSTT--SCSS---TTHHHHHHG-GGCSCHHHHHHHHHHHGGG--CSHHHHHHHHHHH-HHCCTHHHHH
T ss_pred CCCCHHHHHHHHHHHH--HHCH---HHHHHHHHH-HCCCCHHHHHHHHHHHHHC--CHHHHHHHHHHHH-CCCHHHHHHH
T ss_conf 8959999999999998--7387---899999999-7499878999999998761--0123279987330-2303379999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99999887348993889998700048980679989999999
Q 001859 667 AALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMA 707 (1003)
Q Consensus 667 aalALGla~aGtg~~~aI~lL~~l~~D~dd~Vrq~AiiALG 707 (1003)
++.+||.+ |.+.++..|..+.+|++.+||+.|+.+|.
T Consensus 73 a~~aL~~i----~~~~~~~~L~~ll~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 73 AARSLEQI----GGERVRAAMEKLAETGTGFARKVAVNYLE 109 (111)
T ss_dssp HHHHHHHH----CSHHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred HHHHHHHH----CCCCHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999986----76114999999882998999999999987
No 10
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.56 E-value=2.5e-05 Score=49.47 Aligned_cols=110 Identities=14% Similarity=0.038 Sum_probs=72.7
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC------HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 689999975108910368899999887348993------88999870004898067998999999998503664456419
Q 001859 648 TPRIVSLLSESYNPHVRYGAALAVGISCAGTGL------SEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRV 721 (1003)
Q Consensus 648 v~~li~~L~~s~np~VR~gaalALGla~aGtg~------~~aI~lL~~l~~D~dd~Vrq~AiiALGlI~~g~~~a~~pkv 721 (1003)
...++-...++.++.||-.+...+|-.+...+. ...+..|.....+....|+.+|+.++|-|.....+.-.|.+
T Consensus 666 l~~~l~~~l~~~~~~vr~~a~~llgdl~~~~~~~~~~~l~~~~~~l~~~L~~~~~~v~~~a~~~ig~ia~~~~~~~~py~ 745 (888)
T d1qbkb_ 666 ILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYI 745 (888)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHTGGGGGGGS
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999679976899999999887787516877877999999999873867789999999999999998779865059
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 999999999986203892469888997642206998
Q 001859 722 GTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGR 757 (1003)
Q Consensus 722 ~~~lr~L~~~~~~~~~d~~~rfga~lAlGLl~aGg~ 757 (1003)
..++..|.+++.+......++-.++.++|-+....+
T Consensus 746 ~~il~~L~~il~~~~~~~~v~~n~~~~lgrl~~~~p 781 (888)
T d1qbkb_ 746 PMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCP 781 (888)
T ss_dssp HHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCH
T ss_conf 999999999876998637899999999999998797
No 11
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39 E-value=6.7e-05 Score=46.61 Aligned_cols=65 Identities=12% Similarity=0.057 Sum_probs=27.9
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 9987000489806799899999999850366445641999--99999999862038924698889976422
Q 001859 684 ISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGT--FRRQLEKIILDKHEDTMSKMGAILASGIL 752 (1003)
Q Consensus 684 I~lL~~l~~D~dd~Vrq~AiiALGlI~~g~~~a~~pkv~~--~lr~L~~~~~~~~~d~~~rfga~lAlGLl 752 (1003)
+.+|..+.++.++.+|..|+.+|+-+.. ..+.+ -.+.. ....|.+++ +++++.++..+..+++.+
T Consensus 462 i~~Lv~lL~~~~~~v~~~a~~aL~~L~~-~~~~~-~~i~~~g~~~~L~~Ll--~s~n~~v~~~a~~aL~~l 528 (529)
T d1jdha_ 462 IPLFVQLLYSPIENIQRVAAGVLCELAQ-DKEAA-EAIEAEGATAPLTELL--HSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHTT-SHHHH-HHHHHTTCHHHHHHGG--GCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHC-CHHHH-HHHHHCCCHHHHHHHH--CCCCHHHHHHHHHHHHHH
T ss_conf 9999998679998999999999999865-94669-9999888899999985--799999999999999974
No 12
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.33 E-value=1.5e-07 Score=63.96 Aligned_cols=108 Identities=23% Similarity=0.207 Sum_probs=83.2
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 29882589799999843217998876899999751089103688999998873489938899987000489806799899
Q 001859 623 SDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGA 702 (1003)
Q Consensus 623 sd~~ddvrr~AvlaLGlI~~g~~e~v~~li~~L~~s~np~VR~gaalALGla~aGtg~~~aI~lL~~l~~D~dd~Vrq~A 702 (1003)
+|.+..||+.|+.+||.+ |. +.++.++. ++.+.|+.||..++.+||.. +...++..|..+++|++..||..|
T Consensus 2 ~D~~~~VR~~A~~aL~~~--~~-~~~~~L~~-~l~d~~~~vR~~a~~~L~~~----~~~~~~~~L~~~l~d~~~~VR~~a 73 (111)
T d1te4a_ 2 ADENKWVRRDVSTALSRM--GD-EAFEPLLE-SLSNEDWRIRGAAAWIIGNF----QDERAVEPLIKLLEDDSGFVRSGA 73 (111)
T ss_dssp CSSCCCSSSSCCSSTTSC--SS-TTHHHHHH-GGGCSCHHHHHHHHHHHGGG----CSHHHHHHHHHHHHHCCTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH--CH-HHHHHHHH-HHCCCCHHHHHHHHHHHHHC----CHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 895999999999999873--87-89999999-97499878999999998761----012327998733023033799999
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 999999850366445641999999999998620389246988899764
Q 001859 703 LIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASG 750 (1003)
Q Consensus 703 iiALGlI~~g~~~a~~pkv~~~lr~L~~~~~~~~~d~~~rfga~lAlG 750 (1003)
+.+||.++. . ... ..+..++ ++.++.+|..+..|+.
T Consensus 74 ~~aL~~i~~--~-----~~~---~~L~~ll--~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 74 ARSLEQIGG--E-----RVR---AAMEKLA--ETGTGFARKVAVNYLE 109 (111)
T ss_dssp HHHHHHHCS--H-----HHH---HHHHHHT--TSCCTHHHHHHHHHGG
T ss_pred HHHHHHHCC--C-----CHH---HHHHHHH--CCCCHHHHHHHHHHHH
T ss_conf 999998676--1-----149---9999988--2998999999999987
No 13
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.32 E-value=9.9e-05 Score=45.53 Aligned_cols=49 Identities=18% Similarity=0.127 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHHHHCCCHH--------HHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 87203489997653126617--------699999853015980568999999999984
Q 001859 452 PYSEGGALYALGLIHANHGE--------GIKQFLRDSLRSTNVEVIQHGACLGLGLAA 501 (1003)
Q Consensus 452 ~~~k~GAl~ALGLI~~g~~~--------~al~~L~~~L~~~~~~~vr~GA~LGLGla~ 501 (1003)
...+..|+.+|+.|..+..+ .++..|...|.+ .+..++..|+.+||-+.
T Consensus 134 ~~iq~~a~~~L~ni~~~~~~~~~~~~~~g~i~~l~~lL~s-~~~~i~~~a~~~L~nia 190 (503)
T d1wa5b_ 134 EMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYT-GSVEVKEQAIWALGNVA 190 (503)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHH-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCC-CCHHHHHHHHHHHHHHH
T ss_conf 9999999999999974988877999967874789998559-97158999999999985
No 14
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.17 E-value=0.0002 Score=43.49 Aligned_cols=10 Identities=30% Similarity=0.308 Sum_probs=3.2
Q ss_pred HHHHHHHHHH
Q ss_conf 8999999999
Q 001859 489 IQHGACLGLG 498 (1003)
Q Consensus 489 vr~GA~LGLG 498 (1003)
++..++..|+
T Consensus 246 ~~~~al~~l~ 255 (434)
T d1q1sc_ 246 IVTPALRAIG 255 (434)
T ss_dssp HHHHHHHHHH
T ss_pred HHHCHHHHHH
T ss_conf 5402122135
No 15
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.17 E-value=0.0002 Score=43.46 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=24.3
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 7889763058996477999999999897553
Q 001859 9 AGGLLAMLNESHPSLKLHALSNLNSFVDQFW 39 (1003)
Q Consensus 9 a~~~l~lL~e~d~~l~~~AL~~L~~~v~~~w 39 (1003)
...++.+|++++++++..|++.|-.++....
T Consensus 47 ~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~ 77 (1207)
T d1u6gc_ 47 VKMILKLLEDKNGEVQNLAVKCLGPLVSKVK 77 (1207)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999679987999999999999997676
No 16
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.07 E-value=0.00014 Score=44.44 Aligned_cols=70 Identities=10% Similarity=0.120 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHH----CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 58999999999999824953668779875----04437899998215894658999997322577996789999999999
Q 001859 133 PRLEAIVERMLDKCITDGKYQQAMGIAIE----CRRLDKLEEAITRSDNVHGTLSYCINVSHSFVNRREYRREVLRLLVK 208 (1003)
Q Consensus 133 ~~L~~iv~~i~~~~~~~~~~~~AigialE----~~rld~l~~~i~~~~~~~~~~~Y~~~~~~~~~~~~~fr~~vL~~l~~ 208 (1003)
+++.-++-.-+.+-+++..+ ...++||. ++.-++.+.. ...+..+...--.++..|....-.+.+
T Consensus 98 ~el~~L~iNtl~KDL~s~n~-~ir~lALr~L~~i~~~~i~~~l----------~~~V~k~l~~~d~~p~VRk~A~l~l~k 166 (584)
T d2vgla_ 98 SELIRLINNAIKNDLASRNP-TFMGLALHCIANVGSREMAEAF----------AGEIPKILVAGDTMDSVKQSAALCLLR 166 (584)
T ss_dssp HHHHHHHHHHHHHHHHSCCH-HHHHHHHHHHHHHCCHHHHHHH----------TTHHHHHHHCSSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHCCCCHHHHHHH----------HHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 46999999999988699998-9999999998737998888877----------899987503589868999999999999
Q ss_pred HHHCC
Q ss_conf 99339
Q 001859 209 VYQKL 213 (1003)
Q Consensus 209 iy~~~ 213 (1003)
+|...
T Consensus 167 i~~~~ 171 (584)
T d2vgla_ 167 LYRTS 171 (584)
T ss_dssp HHHHC
T ss_pred HHHHC
T ss_conf 99869
No 17
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.01 E-value=0.00041 Score=41.50 Aligned_cols=17 Identities=18% Similarity=0.079 Sum_probs=7.1
Q ss_pred HCCCCHHHHHHHHHHHH
Q ss_conf 10891036889999988
Q 001859 657 ESYNPHVRYGAALAVGI 673 (1003)
Q Consensus 657 ~s~np~VR~gaalALGl 673 (1003)
.+.++.+|..++.+++-
T Consensus 382 ~~~~~~v~~~a~~~l~n 398 (503)
T d1wa5b_ 382 EVAEYKTKKEACWAISN 398 (503)
T ss_dssp HHSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
T ss_conf 26873689999999999
No 18
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.92 E-value=0.00011 Score=45.28 Aligned_cols=58 Identities=10% Similarity=0.048 Sum_probs=27.6
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCCC-------HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 5108910368899999887348993-------889998700048980679989999999985036
Q 001859 656 SESYNPHVRYGAALAVGISCAGTGL-------SEAISLLEPLTSDVVDFVRQGALIAMAMVMVQI 713 (1003)
Q Consensus 656 ~~s~np~VR~gaalALGla~aGtg~-------~~aI~lL~~l~~D~dd~Vrq~AiiALGlI~~g~ 713 (1003)
+.+.++.++.-++.+++-.+.+.+. ..++..|-.++++++..||..|+.+|+-+..+.
T Consensus 153 L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~~~ 217 (264)
T d1xqra1 153 MQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDF 217 (264)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTC
T ss_pred HHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 80586578899999999987445778888887646899999973999899999999999998648
No 19
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.91 E-value=0.00063 Score=40.28 Aligned_cols=333 Identities=15% Similarity=0.071 Sum_probs=163.2
Q ss_pred HHCCH-HHHHHHHHHHHHCCCCCHHHHHH---CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCH--------HHHHHH
Q ss_conf 41112-46999998655437971023210---1366668999999998720348999765312661--------769999
Q 001859 409 RATNW-AKFSATAGLGVIHRGHLQQGRSL---MAPYLPQGGAGGGGSPYSEGGALYALGLIHANHG--------EGIKQF 476 (1003)
Q Consensus 409 k~~~w-~kfsAtaSLG~Ih~G~~~~~l~~---L~~yL~~~~~~~~~~~~~k~GAl~ALGLI~~g~~--------~~al~~ 476 (1003)
+..+| .|.+|..++|.|-.|..+.-... +-+++... .++.++.+|..++.+||-+..|.. .+.+..
T Consensus 405 ~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~--l~d~~~~Vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~ 482 (888)
T d1qbkb_ 405 FHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQC--LSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTE 482 (888)
T ss_dssp TSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHH--TTSSCHHHHHHHHHHHHHTHHHHHSSCHHHHTTTHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2205689999999864355557877421203556799984--26998999999999999999986654156554555899
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHC--CCCC----HHHHHHHHHHHCCCCHHHHHHHHHHHHHHH--CCCC--CHHHH-
Q ss_conf 98530159805689999999999844--8999----879999998531798455899999975666--1798--45899-
Q 001859 477 LRDSLRSTNVEVIQHGACLGLGLAAL--GTAD----EDIYDDIKNVLYTDSAVAGEAAGISMGLLM--VGTA--SEKAG- 545 (1003)
Q Consensus 477 L~~~L~~~~~~~vr~GA~LGLGla~~--Gt~~----e~v~e~L~~~L~~Ds~~~~e~AalaLGLI~--~Gs~--n~~v~- 545 (1003)
|...+.+ .+..|+..||.+|+...- +..- ++++..|...+..........+.-++|-+. +|.. .....
T Consensus 483 ll~~l~d-~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~al~~l~~~~~~~~~~~~~~~ 561 (888)
T d1qbkb_ 483 LLKRILD-SNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQ 561 (888)
T ss_dssp HHHHHSS-SCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHGGGGCSHHHHH
T ss_pred HHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 9988428-987899989999999998755311357999999999998600377999999999999986231013367999
Q ss_pred HHHHHHH----H-CCCHHHHHHHHHHHHHH--CCCCH--HHH----HHHHHHHH----------------CCCC-HHHHH
Q ss_conf 9999863----1-28635888999987572--16892--359----99999982----------------2998-14577
Q 001859 546 EMLTYAH----E-TQHEKIIRGLALGIALT--VYGRE--EEA----DTLIEQMT----------------RDQD-PILRY 595 (1003)
Q Consensus 546 ~LL~~~~----e-t~~e~i~r~~algLgLi--~~G~~--e~a----~~lie~L~----------------~~~d-~i~R~ 595 (1003)
.++..+. . ..+.+....+.-+++.+ .+|.. .-+ +..+..+. ...+ .+...
T Consensus 562 ~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 641 (888)
T d1qbkb_ 562 MLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIV 641 (888)
T ss_dssp HHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 99999999997512106889999999999999867877656999999999889989999998741620110006889999
Q ss_pred HHHHHHHHH-HCCCCCHHH-----HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC----CHHHHHHHHH---HCCCCH
Q ss_conf 899999986-517887999-----999999983298825897999998432179988----7689999975---108910
Q 001859 596 GGMYALALA-YSGTANNKA-----IRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPE----QTPRIVSLLS---ESYNPH 662 (1003)
Q Consensus 596 ~a~~alglA-yaGTGn~~a-----I~~LL~~~vsd~~ddvrr~AvlaLGlI~~g~~e----~v~~li~~L~---~s~np~ 662 (1003)
..-..-+++ ..|..-... +..++..+.++.+.+||..|...+|-+...-+. -++.++..+. .+.++-
T Consensus 642 ~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~~~~vr~~a~~llgdl~~~~~~~~~~~l~~~~~~l~~~L~~~~~~ 721 (888)
T d1qbkb_ 642 ALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFIS 721 (888)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTCCGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 99998889987305666666585699999999679976899999999887787516877877999999999873867789
Q ss_pred HHHHHHHHHHHHHCCCCC------HHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 368899999887348993------88999870004898--0679989999999985036644564199999999999862
Q 001859 663 VRYGAALAVGISCAGTGL------SEAISLLEPLTSDV--VDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILD 734 (1003)
Q Consensus 663 VR~gaalALGla~aGtg~------~~aI~lL~~l~~D~--dd~Vrq~AiiALGlI~~g~~~a~~pkv~~~lr~L~~~~~~ 734 (1003)
+|..++.++|.++...|. +.++..|.+..+++ ...|+.++++++|.++...++...|.+.+|++.+-+.+.+
T Consensus 722 v~~~a~~~ig~ia~~~~~~~~py~~~il~~L~~il~~~~~~~~v~~n~~~~lgrl~~~~p~~~~~~l~~~~~~~~~~l~~ 801 (888)
T d1qbkb_ 722 VCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRN 801 (888)
T ss_dssp HHHHHHHHHHHHHHHTGGGGGGGSHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHCHHHHGGGGGGTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999877986505999999999987699863789999999999999879798886499999999997263
Q ss_pred HCCCHHHHHHH
Q ss_conf 03892469888
Q 001859 735 KHEDTMSKMGA 745 (1003)
Q Consensus 735 ~~~d~~~rfga 745 (1003)
.+|..-|..+
T Consensus 802 -~~d~~ek~~~ 811 (888)
T d1qbkb_ 802 -IRDNEEKDSA 811 (888)
T ss_dssp -SCCSHHHHHH
T ss_pred -CCCCHHHHHH
T ss_conf -7981899999
No 20
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.78 E-value=0.00039 Score=41.63 Aligned_cols=67 Identities=12% Similarity=0.158 Sum_probs=36.9
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC---------CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 999999983298825897999998432179988---------76899999751089103688999998873489938899
Q 001859 614 IRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPE---------QTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAI 684 (1003)
Q Consensus 614 I~~LL~~~vsd~~ddvrr~AvlaLGlI~~g~~e---------~v~~li~~L~~s~np~VR~gaalALGla~aGtg~~~aI 684 (1003)
+..|++.+. ..+.++++.++..|+-++.++++ .++.++.+ +++.++.+|..+..+|+-+.. .++..+
T Consensus 146 i~~L~~lL~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~l-L~~~~~~~~~~a~~aL~~L~~--~~~~~~ 221 (264)
T d1xqra1 146 FSVLMRAMQ-QQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVAL-VRTEHSPFHEHVLGALCSLVT--DFPQGV 221 (264)
T ss_dssp HHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHH-HTSCCSTHHHHHHHHHHHHHT--TCHHHH
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHH--CCHHHH
T ss_conf 268899880-5865788999999999874457788888876468999999-739998999999999999986--488999
No 21
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.77 E-value=0.001 Score=38.83 Aligned_cols=62 Identities=21% Similarity=0.056 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH------HHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 768999997510891036889999988734899388------999870004898067998999999998
Q 001859 647 QTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSE------AISLLEPLTSDVVDFVRQGALIAMAMV 709 (1003)
Q Consensus 647 ~v~~li~~L~~s~np~VR~gaalALGla~aGtg~~~------aI~lL~~l~~D~dd~Vrq~AiiALGlI 709 (1003)
.++.++++| .+.++.+|..++.+|+..+....+.. ++..|..++++.+..||..|..+|..+
T Consensus 461 ~i~~Lv~lL-~~~~~~v~~~a~~aL~~L~~~~~~~~~i~~~g~~~~L~~Ll~s~n~~v~~~a~~aL~~l 528 (529)
T d1jdha_ 461 TIPLFVQLL-YSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp CHHHHHHGG-GCSCHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHH-CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 899999986-79998999999999999865946699999888899999985799999999999999974
No 22
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.53 E-value=0.0023 Score=36.58 Aligned_cols=122 Identities=6% Similarity=-0.048 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC-------CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC----
Q ss_conf 99999999983298825897999998432179988-------7689999975108910368899999887348993----
Q 001859 612 KAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPE-------QTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL---- 680 (1003)
Q Consensus 612 ~aI~~LL~~~vsd~~ddvrr~AvlaLGlI~~g~~e-------~v~~li~~L~~s~np~VR~gaalALGla~aGtg~---- 680 (1003)
..+..++.......+..+|..+..+++-+.-.-.+ .+...+...+++.++.+|..+..++|-++-..+.
T Consensus 597 ~l~~~l~~~l~~~~~~~v~~~~l~~l~~l~~~~~~~~~~~l~~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~~~~~~~ 676 (861)
T d2bpta1 597 MLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRR 676 (861)
T ss_dssp HHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999751001588365887899999888877457899999997059998737998899999999999999975787271
Q ss_pred --HHHHHH-HHHHCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf --889998-700048-98067998999999998503664456419999999999986
Q 001859 681 --SEAISL-LEPLTS-DVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIIL 733 (1003)
Q Consensus 681 --~~aI~l-L~~l~~-D~dd~Vrq~AiiALGlI~~g~~~a~~pkv~~~lr~L~~~~~ 733 (1003)
...+.. +..+.. +.+..+|..|+-++|-|.......-.|.+.+++..+.+.+.
T Consensus 677 ~~~~i~~~L~~~l~~~~~~~~~k~~~~~~l~~i~~~~~~~~~~~l~~~~~~l~~~~~ 733 (861)
T d2bpta1 677 YSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQN 733 (861)
T ss_dssp HHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 199999999998578888899999999999999999879889999999999999857
No 23
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=97.41 E-value=0.0032 Score=35.63 Aligned_cols=89 Identities=17% Similarity=0.169 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH-H-HCCCCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 79999999999832------98825897999998432179988768999997-5-1089103688999998873489938
Q 001859 610 NNKAIRQLLHFAVS------DVSDDVRRTAVLALGFVLYSEPEQTPRIVSLL-S-ESYNPHVRYGAALAVGISCAGTGLS 681 (1003)
Q Consensus 610 n~~aI~~LL~~~vs------d~~ddvrr~AvlaLGlI~~g~~e~v~~li~~L-~-~s~np~VR~gaalALGla~aGtg~~ 681 (1003)
....+..|..++.. .....+|-+|+.+|.-+....|..+-.++-.+ . ...++.+|.+|.++|--. +|..
T Consensus 201 ~p~~i~~l~~~l~~~~~~~~~~~~~vR~aAi~Alr~~~~~~p~~v~~~l~~i~~n~~e~~EvRiaA~~~lm~t---~P~~ 277 (336)
T d1lsha1 201 QPNSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFES---KPSV 277 (336)
T ss_dssp CGGGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHT---CCCH
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC---CCCH
T ss_conf 8768999999865656544442578999999999876550869999999999758999868999999999853---9999
Q ss_pred HHHH-HHHHHCCCCHHHHHHH
Q ss_conf 8999-8700048980679989
Q 001859 682 EAIS-LLEPLTSDVVDFVRQG 701 (1003)
Q Consensus 682 ~aI~-lL~~l~~D~dd~Vrq~ 701 (1003)
..+. +...+-.|++..|+..
T Consensus 278 ~~l~~i~~~l~~E~~~QV~sf 298 (336)
T d1lsha1 278 ALVSMVAVRLRREPNLQVASF 298 (336)
T ss_dssp HHHHHHHHHHTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHH
T ss_conf 999999999874827999999
No 24
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.28 E-value=0.0046 Score=34.61 Aligned_cols=130 Identities=12% Similarity=0.070 Sum_probs=53.7
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCH----HHHHHHHH
Q ss_conf 99982299814577899999986517887-99999999998329882589799999843217998876----89999975
Q 001859 582 IEQMTRDQDPILRYGGMYALALAYSGTAN-NKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQT----PRIVSLLS 656 (1003)
Q Consensus 582 ie~L~~~~d~i~R~~a~~alglAyaGTGn-~~aI~~LL~~~vsd~~ddvrr~AvlaLGlI~~g~~e~v----~~li~~L~ 656 (1003)
+..+..++++.+|..+.-.+ +..+...| ..+++.|++++.+ .+.++++.++.++|.+...-+... ..+++++
T Consensus 366 l~~l~~~~~~~Ir~~aL~lL-~~L~n~~Ni~~Iv~eL~~yl~~-~d~~~k~~~i~~I~~la~k~~~~~~~~i~~Ll~ll- 442 (584)
T d2vgla_ 366 INALKTERDVSVRQRAVDLL-YAMCDRSNAQQIVAEMLSYLET-ADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLI- 442 (584)
T ss_dssp HHHHTTCCCHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHCSSTHHHHHHHHHHH-
T ss_pred HHHCCCCCHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-
T ss_conf 97400586149999999999-9967987899999999998762-89999999999999999977660899999999999-
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHCCC-C-HHHHHHHHHHHHHHHHCCCC
Q ss_conf 10891036889999988734899--38899987000489-8-06799899999999850366
Q 001859 657 ESYNPHVRYGAALAVGISCAGTG--LSEAISLLEPLTSD-V-VDFVRQGALIAMAMVMVQIN 714 (1003)
Q Consensus 657 ~s~np~VR~gaalALGla~aGtg--~~~aI~lL~~l~~D-~-dd~Vrq~AiiALGlI~~g~~ 714 (1003)
+....++..-+...+--+....+ ...++..|..+..+ . .+-..+.|+.-+|--|....
T Consensus 443 ~~~~~~v~~ei~~~l~~li~~~~~~r~~~v~~l~~~l~~~~~~~~~~~~~~wilGEYG~~~~ 504 (584)
T d2vgla_ 443 RIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHENLVKVGGYILGEFGXXXX 504 (584)
T ss_dssp HHHGGGSCSHHHHHHHHHHGGGCSCHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHTHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCCCC
T ss_conf 85241369999999999986293789999999999860777648999888044636899743
No 25
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=97.09 E-value=4.8e-05 Score=47.56 Aligned_cols=178 Identities=15% Similarity=0.107 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 98720348999765312661769999985301598056899999999998448999879999998531798455899999
Q 001859 451 SPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHGACLGLGLAALGTADEDIYDDIKNVLYTDSAVAGEAAGI 530 (1003)
Q Consensus 451 ~~~~k~GAl~ALGLI~~g~~~~al~~L~~~L~~~~~~~vr~GA~LGLGla~~Gt~~e~v~e~L~~~L~~Ds~~~~e~Aal 530 (1003)
++|.+--++++ -|+. ...|...+++ .++.||..|+..||. +.|...+..++..++..++-
T Consensus 53 ~p~~e~Ra~Aa---~~a~-----~~~L~~Ll~D-~d~~VR~~AA~~Lp~-----------~~L~~L~~D~d~~VR~~aa~ 112 (233)
T d1lrva_ 53 DPFWERRAIAV---RYSP-----VEALTPLIRD-SDEVVRRAVAYRLPR-----------EQLSALMFDEDREVRITVAD 112 (233)
T ss_dssp CSSHHHHHHHH---TTSC-----GGGGGGGTTC-SSHHHHHHHHTTSCS-----------GGGGGTTTCSCHHHHHHHHH
T ss_pred CCCHHHHHHHH---HCCC-----HHHHHHHHCC-CCHHHHHHHHHHCCH-----------HHHHHHHCCCCHHHHHHHHH
T ss_conf 99699999987---0199-----9999988269-898999999997489-----------99999844997468998874
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 97566617984589999998631286358889999875721689235999999982299814577899999986517887
Q 001859 531 SMGLLMVGTASEKAGEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTAN 610 (1003)
Q Consensus 531 aLGLI~~Gs~n~~v~~LL~~~~et~~e~i~r~~algLgLi~~G~~e~a~~lie~L~~~~d~i~R~~a~~alglAyaGTGn 610 (1003)
+|. .+ .|.. +....+..++..++-.++ ...+..|..++++.+|...+-.+ ++
T Consensus 113 ~l~--------~~--~L~~-Ll~D~d~~VR~~aa~~~~----------~~~L~~L~~D~d~~VR~~aA~~~-----~~-- 164 (233)
T d1lrva_ 113 RLP--------LE--QLEQ-MAADRDYLVRAYVVQRIP----------PGRLFRFMRDEDRQVRKLVAKRL-----PE-- 164 (233)
T ss_dssp HSC--------TG--GGGG-GTTCSSHHHHHHHHHHSC----------GGGGGGTTTCSCHHHHHHHHHHS-----CG--
T ss_pred CCC--------HH--HHHH-HHCCCCHHHHHHHHHCCC----------HHHHHHHHCCCCHHHHHHHHHHC-----CH--
T ss_conf 268--------89--9999-855998789999986110----------66899883489789999999845-----99--
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 99999999998329882589799999843217998876899999751089103688999998873489938899987000
Q 001859 611 NKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPL 690 (1003)
Q Consensus 611 ~~aI~~LL~~~vsd~~ddvrr~AvlaLGlI~~g~~e~v~~li~~L~~s~np~VR~gaalALGla~aGtg~~~aI~lL~~l 690 (1003)
..|..+..|.+..||+.++..|+ +..+..|+.+.+++||+.++-.++ . ++|..
T Consensus 165 -----~~L~~l~~D~d~~VR~~aa~~L~----------~~~L~~l~~D~d~~VR~aaae~~~--------~---~ll~~- 217 (233)
T d1lrva_ 165 -----ESLGLMTQDPEPEVRRIVASRLR----------GDDLLELLHDPDWTVRLAAVEHAS--------L---EALRE- 217 (233)
T ss_dssp -----GGGGGSTTCSSHHHHHHHHHHCC----------GGGGGGGGGCSSHHHHHHHHHHSC--------H---HHHHH-
T ss_pred -----HHHHHHCCCCCHHHHHHHHHHCC----------CHHHHHHHHCCCHHHHHHHHHHCC--------H---HHHHH-
T ss_conf -----99998705998899999998458----------499999873998899999997063--------9---99998-
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 4898067998999
Q 001859 691 TSDVVDFVRQGAL 703 (1003)
Q Consensus 691 ~~D~dd~Vrq~Ai 703 (1003)
+.|++.+||..|.
T Consensus 218 L~D~d~~VR~aA~ 230 (233)
T d1lrva_ 218 LDEPDPEVRLAIA 230 (233)
T ss_dssp CCCCCHHHHHHHH
T ss_pred HCCCCHHHHHHHH
T ss_conf 6799999999999
No 26
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=97.02 E-value=3.9e-05 Score=48.20 Aligned_cols=183 Identities=17% Similarity=0.089 Sum_probs=113.1
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCH
Q ss_conf 85301598056899999999998448999879999998531798455899999975666179845899999986312863
Q 001859 478 RDSLRSTNVEVIQHGACLGLGLAALGTADEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGEMLTYAHETQHE 557 (1003)
Q Consensus 478 ~~~L~~~~~~~vr~GA~LGLGla~~Gt~~e~v~e~L~~~L~~Ds~~~~e~AalaLGLI~~Gs~n~~v~~LL~~~~et~~e 557 (1003)
..||.++ +..+|.-|+- ++. .+.|...+..+++.++..|+..||- +.+..+....+.
T Consensus 48 ~~~l~~p-~~e~Ra~Aa~-----~a~------~~~L~~Ll~D~d~~VR~~AA~~Lp~-----------~~L~~L~~D~d~ 104 (233)
T d1lrva_ 48 VQYLADP-FWERRAIAVR-----YSP------VEALTPLIRDSDEVVRRAVAYRLPR-----------EQLSALMFDEDR 104 (233)
T ss_dssp GGGTTCS-SHHHHHHHHT-----TSC------GGGGGGGTTCSSHHHHHHHHTTSCS-----------GGGGGTTTCSCH
T ss_pred HHHHCCC-CHHHHHHHHH-----CCC------HHHHHHHHCCCCHHHHHHHHHHCCH-----------HHHHHHHCCCCH
T ss_conf 9885499-6999999870-----199------9999988269898999999997489-----------999998449974
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 58889999875721689235999999982299814577899999986517887999999999983298825897999998
Q 001859 558 KIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLAL 637 (1003)
Q Consensus 558 ~i~r~~algLgLi~~G~~e~a~~lie~L~~~~d~i~R~~a~~alglAyaGTGn~~aI~~LL~~~vsd~~ddvrr~AvlaL 637 (1003)
.+++.++-.++ ...+..|..++|+.+|..++-.+ . ..+|..+..|.+..||+.++-.+
T Consensus 105 ~VR~~aa~~l~----------~~~L~~Ll~D~d~~VR~~aa~~~-------~-----~~~L~~L~~D~d~~VR~~aA~~~ 162 (233)
T d1lrva_ 105 EVRITVADRLP----------LEQLEQMAADRDYLVRAYVVQRI-------P-----PGRLFRFMRDEDRQVRKLVAKRL 162 (233)
T ss_dssp HHHHHHHHHSC----------TGGGGGGTTCSSHHHHHHHHHHS-------C-----GGGGGGTTTCSCHHHHHHHHHHS
T ss_pred HHHHHHHHCCC----------HHHHHHHHCCCCHHHHHHHHHCC-------C-----HHHHHHHHCCCCHHHHHHHHHHC
T ss_conf 68998874268----------89999985599878999998611-------0-----66899883489789999999845
Q ss_pred HHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 43217998876899999751089103688999998873489938899987000489806799899999999850366445
Q 001859 638 GFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEAN 717 (1003)
Q Consensus 638 GlI~~g~~e~v~~li~~L~~s~np~VR~gaalALGla~aGtg~~~aI~lL~~l~~D~dd~Vrq~AiiALGlI~~g~~~a~ 717 (1003)
+ +..+..+.++.++.||.+++..+| .+.|..+++|++..||..++-.++
T Consensus 163 ~----------~~~L~~l~~D~d~~VR~~aa~~L~-----------~~~L~~l~~D~d~~VR~aaae~~~---------- 211 (233)
T d1lrva_ 163 P----------EESLGLMTQDPEPEVRRIVASRLR-----------GDDLLELLHDPDWTVRLAAVEHAS---------- 211 (233)
T ss_dssp C----------GGGGGGSTTCSSHHHHHHHHHHCC-----------GGGGGGGGGCSSHHHHHHHHHHSC----------
T ss_pred C----------HHHHHHHCCCCCHHHHHHHHHHCC-----------CHHHHHHHHCCCHHHHHHHHHHCC----------
T ss_conf 9----------999998705998899999998458-----------499999873998899999997063----------
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 64199999999999862038924698889
Q 001859 718 DSRVGTFRRQLEKIILDKHEDTMSKMGAI 746 (1003)
Q Consensus 718 ~pkv~~~lr~L~~~~~~~~~d~~~rfga~ 746 (1003)
+ .+++. + ...|+.+|..++
T Consensus 212 -~---~ll~~----L--~D~d~~VR~aA~ 230 (233)
T d1lrva_ 212 -L---EALRE----L--DEPDPEVRLAIA 230 (233)
T ss_dssp -H---HHHHH----C--CCCCHHHHHHHH
T ss_pred -H---HHHHH----H--CCCCHHHHHHHH
T ss_conf -9---99998----6--799999999999
No 27
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.80 E-value=0.012 Score=31.79 Aligned_cols=58 Identities=21% Similarity=0.147 Sum_probs=34.9
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCC-------CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 97510891036889999988734899-------38899987000489806799899999999850
Q 001859 654 LLSESYNPHVRYGAALAVGISCAGTG-------LSEAISLLEPLTSDVVDFVRQGALIAMAMVMV 711 (1003)
Q Consensus 654 ~L~~s~np~VR~gaalALGla~aGtg-------~~~aI~lL~~l~~D~dd~Vrq~AiiALGlI~~ 711 (1003)
...++.++.+|+++.+++|.+.-|.. .+.++..|.++.+|++..||.+|+.++|-+.-
T Consensus 372 ~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~ 436 (458)
T d1ibrb_ 372 EHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICE 436 (458)
T ss_dssp HHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 98569998999999999999997547767898899999999988489989999999999999999
No 28
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.69 E-value=0.015 Score=31.29 Aligned_cols=60 Identities=13% Similarity=0.026 Sum_probs=40.4
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 897630589964779999999998975536743018799998603688988899999999887
Q 001859 11 GLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKV 73 (1003)
Q Consensus 11 ~~l~lL~e~d~~l~~~AL~~L~~~v~~~w~ei~~~~~~ie~lyed~~f~~~~r~laA~v~Skv 73 (1003)
.+|.-+..+|++.+..|-+.|.+...+..++....+-.| ..+...+...|.+|+.++.+.
T Consensus 4 ~il~~~~s~d~~~r~~A~~~L~~~~~~~~~~~~~~l~~i---l~~~~~~~~~R~~A~i~lk~~ 63 (458)
T d1ibrb_ 4 TILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRV---LANPGNSQVARVAAGLQIKNS 63 (458)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH---HHCCCCCHHHHHHHHHHHHHH
T ss_conf 899988594999999999999998752835899999999---844899989999999999988
No 29
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.73 E-value=0.046 Score=28.05 Aligned_cols=65 Identities=9% Similarity=0.030 Sum_probs=46.8
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHH---HHHHHHHHC--HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 889763058996477999999999897---553674301--8799998603688988899999999887133
Q 001859 10 GGLLAMLNESHPSLKLHALSNLNSFVD---QFWPEISTS--VPIIESLYEDEEFDQHQRQLAALLVSKVFYY 76 (1003)
Q Consensus 10 ~~~l~lL~e~d~~l~~~AL~~L~~~v~---~~w~ei~~~--~~~ie~lyed~~f~~~~r~laA~v~Skvy~~ 76 (1003)
.-++.+|+.++++++..|...|..+-. ..+..+... ++.|-.+.++.. ++-|..|+..+..+.++
T Consensus 5 p~lv~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~--~~v~~~a~~aL~~L~~~ 74 (457)
T d1xm9a1 5 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPN--QNVQQAAAGALRNLVFR 74 (457)
T ss_dssp HHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSC--HHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC--HHHHHHHHHHHHHHHCC
T ss_conf 99999857999999999999999998499999999998885999999877999--89999999999999749
No 30
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=95.58 E-value=0.053 Score=27.67 Aligned_cols=77 Identities=18% Similarity=0.246 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH------CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC--CHHH
Q ss_conf 82589799999843217998876899999751------089103688999998873489938899987000489--8067
Q 001859 626 SDDVRRTAVLALGFVLYSEPEQTPRIVSLLSE------SYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSD--VVDF 697 (1003)
Q Consensus 626 ~ddvrr~AvlaLGlI~~g~~e~v~~li~~L~~------s~np~VR~gaalALGla~aGtg~~~aI~lL~~l~~D--~dd~ 697 (1003)
+++-+-.+.-|||-+ |.++.++.+...+.. ...+++|-.+..||.-.-.. -...+.++|.+...| .+..
T Consensus 185 ~~~~~~~~LkaLGN~--g~p~~i~~l~~~l~~~~~~~~~~~~~vR~aAi~Alr~~~~~-~p~~v~~~l~~i~~n~~e~~E 261 (336)
T d1lsha1 185 KEEEIVLALKALGNA--GQPNSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKR-DPRKVQEIVLPIFLNVAIKSE 261 (336)
T ss_dssp CHHHHHHHHHHHHHH--TCGGGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGT-CHHHHHHHHHHHHHCTTSCHH
T ss_pred CHHHHHHHHHHHHCC--CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHCCCCCCHH
T ss_conf 639999999997414--98768999999865656544442578999999999876550-869999999999758999868
Q ss_pred HHHHHHHH
Q ss_conf 99899999
Q 001859 698 VRQGALIA 705 (1003)
Q Consensus 698 Vrq~AiiA 705 (1003)
||..|+..
T Consensus 262 vRiaA~~~ 269 (336)
T d1lsha1 262 LRIRSCIV 269 (336)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 31
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.98 E-value=0.19 Score=23.96 Aligned_cols=58 Identities=14% Similarity=0.033 Sum_probs=37.0
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 8976305899647799999999989755367430187999986036889888999999998
Q 001859 11 GLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVS 71 (1003)
Q Consensus 11 ~~l~lL~e~d~~l~~~AL~~L~~~v~~~w~ei~~~~~~ie~lyed~~f~~~~r~laA~v~S 71 (1003)
.+|.-...+|++.+..|-+.|.+.-.+..++. +..+-....+.+.+..-|++|+..+-
T Consensus 5 ~~L~~~~s~d~~~r~~Ae~~L~~~~~~~~~~f---~~~L~~i~~~~~~~~~iR~~A~i~lK 62 (876)
T d1qgra_ 5 TILEKTVSPDRLELEAAQKFLERAAVENLPTF---LVELSRVLANPGNSQVARVAAGLQIK 62 (876)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHH---HHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 99998859298999999999999986071579---99999998448999999999999999
No 32
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.34 E-value=0.24 Score=23.42 Aligned_cols=33 Identities=6% Similarity=0.199 Sum_probs=15.3
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 87999986036889888999999998871335891
Q 001859 46 VPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGEL 80 (1003)
Q Consensus 46 ~~~ie~lyed~~f~~~~r~laA~v~Skvy~~lg~~ 80 (1003)
+|.+-.+-.... ++.+..||-.+..+.+.-.+.
T Consensus 4 ip~lv~~L~~~~--~~~~~~a~~~l~~l~~~~~~~ 36 (457)
T d1xm9a1 4 IPKAVQYLSSQD--EKYQAIGAYYIQHTCFQDESA 36 (457)
T ss_dssp HHHHHHHHHSSC--THHHHHHHHHHHHHTSSCSSH
T ss_pred HHHHHHHHCCCC--HHHHHHHHHHHHHHHCCCHHH
T ss_conf 899999857999--999999999999998499999
No 33
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.26 E-value=0.31 Score=22.65 Aligned_cols=100 Identities=15% Similarity=0.148 Sum_probs=54.5
Q ss_pred HHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC----------
Q ss_conf 8897-63058996477999999999897553674301879999860368898889999999988713358----------
Q 001859 10 GGLL-AMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLG---------- 78 (1003)
Q Consensus 10 ~~~l-~lL~e~d~~l~~~AL~~L~~~v~~~w~ei~~~~~~ie~lyed~~f~~~~r~laA~v~Skvy~~lg---------- 78 (1003)
..+| ..+..+|++.+..|-+.|+..-.+.- ...+..+-.+..+.+.+...|.+|+.++-....+..
T Consensus 7 ~~~L~~~~~s~d~~~r~~Ae~~L~~~~~~~~---~~~~~~l~~il~~~~~~~~~r~~A~i~lkn~i~~~~~~~~~~~~~~ 83 (861)
T d2bpta1 7 AQLLENSILSPDQNIRLTSETQLKKLSNDNF---LQFAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQR 83 (861)
T ss_dssp HHHHHHHHHCSSHHHHHHHHHHHHHHHHHCH---HHHHHHHHHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 9999998559899999999999999874471---6899999999976999989999999999998511450223567766
Q ss_pred -------CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -------91457987761499889999845899999999999999
Q 001859 79 -------ELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYAS 116 (1003)
Q Consensus 79 -------~~~~sL~yaL~ag~~fd~~~~~eYv~tl~~~~id~y~~ 116 (1003)
+..+.++=.|..+ +.+....||+.++.|+.....
T Consensus 84 ~~~~i~~~~~~~ik~~ll~~----l~~~~~~vr~~~a~~i~~i~~ 124 (861)
T d2bpta1 84 WITQVSPEAKNQIKTNALTA----LVSIEPRIANAAAQLIAAIAD 124 (861)
T ss_dssp HHHHSCHHHHHHHHHHHHHH----HTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHHHH
T ss_conf 67329999999999999998----839988999999999999999
No 34
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068 {Enterococcus faecalis [TaxId: 1351]}
Probab=72.98 E-value=1.8 Score=17.56 Aligned_cols=78 Identities=10% Similarity=-0.035 Sum_probs=49.9
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9843217998876899999751089103688999998873489938899-987000489806799899999999850366
Q 001859 636 ALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAI-SLLEPLTSDVVDFVRQGALIAMAMVMVQIN 714 (1003)
Q Consensus 636 aLGlI~~g~~e~v~~li~~L~~s~np~VR~gaalALGla~aGtg~~~aI-~lL~~l~~D~dd~Vrq~AiiALGlI~~g~~ 714 (1003)
..|.+.. .++.....+.....|.|+++|+.++.++ +.+.-.++.+.+ ..+..+.+|+..+|+.+.-=+|.-++...+
T Consensus 109 i~~~~~~-~~~~~~~~l~~w~~s~~~w~rR~aiv~~-l~~~~~~~~~~~~~~~~~~~~d~e~~i~kAigW~Lre~~k~~p 186 (213)
T d2b6ca1 109 FGSWVAL-HLTELPTIFALFYGAENFWNRRVALNLQ-LMLKEKTNQDLLKKAIIYDRTTEEFFIQKAIGWSLRQYSKTNP 186 (213)
T ss_dssp HHHHHHH-SGGGHHHHHHHHTTCSSHHHHHHHHHTT-TTCGGGCCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCH
T ss_conf 9999998-2666899999998299799999999988-9998755677999999984799099999999999999987798
Q ss_pred C
Q ss_conf 4
Q 001859 715 E 715 (1003)
Q Consensus 715 ~ 715 (1003)
+
T Consensus 187 ~ 187 (213)
T d2b6ca1 187 Q 187 (213)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 35
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=67.45 E-value=2.4 Score=16.79 Aligned_cols=87 Identities=21% Similarity=0.261 Sum_probs=59.4
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 43789999821589465899999732257799678999999999999339996588897888745894789999999873
Q 001859 164 RLDKLEEAITRSDNVHGTLSYCINVSHSFVNRREYRREVLRLLVKVYQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 243 (1003)
Q Consensus 164 rld~l~~~i~~~~~~~~~~~Y~~~~~~~~~~~~~fr~~vL~~l~~iy~~~~~~dy~~~~~~~i~L~d~~~v~~il~~l~~ 243 (1003)
||+.+++++.. +|...+- -+.++-+....++.+..+|..++ +|-.+..|++++.+.+.+.+.+.+.
T Consensus 1 ~~~~~e~fl~~-~n~~d~~---------~i~~~c~~~~lye~A~~lY~~~~--d~~rl~~~~v~l~~~~~avd~~~k~-- 66 (336)
T d1b89a_ 1 RLAELEEFING-PNNAHIQ---------QVGDRCYDEKMYDAAKLLYNNVS--NFGRLASTLVHLGEYQAAVDGARKA-- 66 (336)
T ss_dssp CHHHHTTTTTC-C-------------------------CTTTHHHHHHHTT--CHHHHHHHHHTTTCHHHHHHHHHHH--
T ss_pred CCHHHHHHHCC-CCCCCHH---------HHHHHHHHCCCHHHHHHHHHHCC--CHHHHHHHHHHHCCHHHHHHHHHHC--
T ss_conf 94569998758-9857899---------99999987877999999998678--9999999997031599999999880--
Q ss_pred CCCCCCHHHHHHHHHCCCCCHHHHH
Q ss_conf 3587619988654220220037999
Q 001859 244 SENKDDALLAFQIAFDLVENEHQAF 268 (1003)
Q Consensus 244 ~~~~~~~l~ayQiafdL~~~~~q~f 268 (1003)
.+..+-+++++.+.+...+..
T Consensus 67 ----~~~~~~k~~~~~l~~~~e~~l 87 (336)
T d1b89a_ 67 ----NSTRTWKEVCFACVDGKEFRL 87 (336)
T ss_dssp ----TCHHHHHHHHHHHHHTTCHHH
T ss_pred ----CCHHHHHHHHHHHHHCCHHHH
T ss_conf ----889999999999972728789
No 36
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=38.23 E-value=7.2 Score=13.69 Aligned_cols=18 Identities=17% Similarity=0.117 Sum_probs=8.5
Q ss_pred HHHHCCCCCCCHHHHHHH
Q ss_conf 988713358914579877
Q 001859 70 VSKVFYYLGELNDSLSYA 87 (1003)
Q Consensus 70 ~Skvy~~lg~~~~sL~ya 87 (1003)
...+++..|++++++.+.
T Consensus 18 rA~~~~~~g~~~~A~~~~ 35 (366)
T d1hz4a_ 18 RAQVAINDGNPDEAERLA 35 (366)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHH
T ss_conf 999999888999999999
Done!