Query 001860
Match_columns 1003
No_of_seqs 366 out of 4550
Neff 9.8
Searched_HMMs 13730
Date Tue Mar 26 17:27:51 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001860.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1154-1158//hhsearch_scop/001860hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a5yb3 c.37.1.20 (B:109-385) 100.0 4.6E-40 3.4E-44 262.5 14.6 217 152-377 21-277 (277)
2 d2omza2 c.10.2.1 (A:33-416) In 99.9 3.3E-22 2.4E-26 151.5 25.5 76 519-596 44-119 (384)
3 d2omza2 c.10.2.1 (A:33-416) In 99.9 4.4E-22 3.2E-26 150.7 24.9 80 540-623 42-121 (384)
4 d1p9ag_ c.10.2.7 (G:) von Will 99.8 6.5E-19 4.8E-23 131.0 18.2 195 473-682 10-206 (266)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.8 1.7E-17 1.2E-21 122.1 24.2 101 519-622 31-134 (305)
6 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 1.9E-16 1.4E-20 115.6 28.3 98 474-580 39-136 (353)
7 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 3.7E-16 2.7E-20 113.8 29.8 139 495-662 38-176 (353)
8 d1xkua_ c.10.2.7 (A:) Decorin 99.8 6.7E-17 4.9E-21 118.5 21.4 146 476-623 13-161 (305)
9 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 1.1E-17 8E-22 123.3 11.6 104 520-624 51-161 (313)
10 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 1.9E-17 1.4E-21 121.8 12.6 129 495-625 50-187 (313)
11 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.4E-16 1E-20 116.4 16.1 122 498-623 13-135 (266)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 4E-16 2.9E-20 113.6 18.2 193 473-678 32-232 (284)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 8.2E-16 6E-20 111.7 19.3 172 477-662 15-191 (284)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 2.5E-15 1.8E-19 108.7 20.0 98 474-574 42-139 (227)
15 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.1E-15 7.9E-20 110.9 17.4 165 472-657 45-209 (210)
16 d2omxa2 c.10.2.1 (A:37-235) In 99.7 2.1E-15 1.6E-19 109.1 17.9 147 472-625 39-185 (199)
17 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.4E-15 9.9E-20 110.3 16.5 165 493-679 44-208 (210)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.5E-15 1.1E-19 110.1 16.4 175 480-676 25-199 (199)
19 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.5E-13 1.1E-17 97.7 19.2 76 519-596 41-116 (227)
20 d2astb2 c.10.1.3 (B:2136-2419) 99.6 6.8E-16 5E-20 112.2 6.8 101 522-622 26-131 (284)
21 d2astb2 c.10.1.3 (B:2136-2419) 99.6 1.4E-15 1E-19 110.3 8.3 60 562-622 44-105 (284)
22 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 3.3E-12 2.4E-16 89.2 16.6 53 477-530 12-64 (242)
23 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 6.3E-13 4.6E-17 93.7 11.3 100 522-623 11-114 (242)
24 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 9.4E-13 6.9E-17 92.6 9.8 122 494-618 17-145 (162)
25 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 4E-13 2.9E-17 94.9 7.7 110 515-625 14-125 (162)
26 d1dcea3 c.10.2.2 (A:444-567) R 99.4 2.7E-12 2E-16 89.8 11.9 96 499-596 2-99 (124)
27 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.4 6.7E-12 4.9E-16 87.3 12.0 124 477-624 12-138 (192)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 1.1E-11 7.7E-16 86.1 12.7 126 521-661 10-139 (192)
29 d1dcea3 c.10.2.2 (A:444-567) R 99.3 2.1E-11 1.5E-15 84.2 11.8 101 522-625 1-103 (124)
30 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.2 3.4E-13 2.5E-17 95.4 -0.1 57 926-988 395-457 (460)
31 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 2.3E-13 1.7E-17 96.5 -3.7 105 516-623 45-151 (198)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 4.2E-13 3.1E-17 94.8 -3.5 103 493-597 46-150 (198)
33 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.1 2.3E-12 1.7E-16 90.2 -1.3 14 951-965 396-409 (460)
34 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.9 5.5E-09 4E-13 69.2 10.2 166 147-325 8-253 (283)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 2.8E-08 2.1E-12 64.8 11.0 100 523-624 12-115 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 3.5E-08 2.6E-12 64.2 11.0 81 516-596 28-112 (156)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.7 1.1E-08 8.1E-13 67.3 6.1 36 517-552 29-69 (344)
38 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 7.9E-09 5.7E-13 68.2 3.6 41 534-574 23-69 (344)
39 d1fnna2 c.37.1.20 (A:1-276) CD 98.6 1E-06 7.5E-11 55.1 13.0 113 150-263 15-136 (276)
40 d1iqpa2 c.37.1.20 (A:2-232) Re 98.4 8.9E-07 6.5E-11 55.5 8.2 52 147-198 20-71 (231)
41 d1r6bx2 c.37.1.20 (X:169-436) 98.3 3.2E-06 2.3E-10 52.0 10.6 100 151-263 18-122 (268)
42 d1w5sa2 c.37.1.20 (A:7-293) CD 98.3 5.9E-06 4.3E-10 50.4 11.5 114 150-263 15-144 (287)
43 d1sxjb2 c.37.1.20 (B:7-230) Re 98.2 2.7E-06 1.9E-10 52.5 7.7 103 147-263 11-113 (224)
44 d1sxjc2 c.37.1.20 (C:12-238) R 98.2 3.2E-06 2.4E-10 52.0 7.6 70 147-216 10-79 (227)
45 d1jbka_ c.37.1.20 (A:) ClpB, A 98.1 2E-05 1.5E-09 47.0 10.6 97 152-261 23-125 (195)
46 d1qvra2 c.37.1.20 (A:149-535) 98.1 1.7E-05 1.2E-09 47.6 9.7 100 151-263 22-127 (387)
47 d1sxjd2 c.37.1.20 (D:26-262) R 98.0 5E-06 3.7E-10 50.8 5.6 112 147-263 8-120 (237)
48 d1njfa_ c.37.1.20 (A:) delta p 97.8 9.8E-05 7.1E-09 42.8 10.0 50 148-197 9-59 (239)
49 d1sxja2 c.37.1.20 (A:295-547) 97.8 2.5E-05 1.8E-09 46.4 6.7 109 147-263 10-135 (253)
50 d1d2na_ c.37.1.20 (A:) Hexamer 97.7 0.00021 1.6E-08 40.7 10.5 94 150-262 8-111 (246)
51 d1ixsb2 c.37.1.20 (B:4-242) Ho 97.7 9E-05 6.5E-09 43.0 8.5 70 148-222 6-80 (239)
52 d1in4a2 c.37.1.20 (A:17-254) H 97.7 0.00013 9.2E-09 42.1 9.0 50 148-197 6-60 (238)
53 d1koha1 c.10.2.3 (A:201-362) m 97.6 1.9E-06 1.4E-10 53.4 -1.6 80 539-618 62-152 (162)
54 d1lv7a_ c.37.1.20 (A:) AAA dom 97.5 0.00029 2.1E-08 39.9 8.9 94 149-262 10-115 (256)
55 d1ixza_ c.37.1.20 (A:) AAA dom 97.5 0.00035 2.5E-08 39.4 8.8 94 149-262 7-112 (247)
56 d1e32a2 c.37.1.20 (A:201-458) 97.5 0.00072 5.3E-08 37.4 9.9 95 149-263 2-109 (258)
57 d1sxje2 c.37.1.20 (E:4-255) Re 97.4 7.9E-05 5.8E-09 43.4 4.4 50 147-196 7-57 (252)
58 d1koha1 c.10.2.3 (A:201-362) m 97.3 2.1E-05 1.5E-09 46.9 0.4 79 515-593 61-152 (162)
59 d1r7ra3 c.37.1.20 (A:471-735) 97.1 0.00064 4.7E-08 37.7 6.8 94 150-263 6-112 (265)
60 d1mo6a1 c.37.1.11 (A:1-269) Re 97.1 0.005 3.7E-07 32.1 11.3 86 171-263 59-150 (269)
61 d1a5ta2 c.37.1.20 (A:1-207) de 97.0 0.0057 4.2E-07 31.8 11.9 42 155-196 6-48 (207)
62 d1r6bx3 c.37.1.20 (X:437-751) 97.0 0.0012 8.6E-08 36.0 6.9 102 152-263 23-133 (315)
63 d2jdid3 c.37.1.11 (D:82-357) C 96.9 0.0075 5.4E-07 31.1 10.5 98 162-260 57-177 (276)
64 d1l8qa2 c.37.1.20 (A:77-289) C 96.8 0.0065 4.7E-07 31.5 9.7 87 159-263 21-109 (213)
65 d1qvra3 c.37.1.20 (A:536-850) 96.8 0.0013 9.6E-08 35.8 5.8 102 152-263 24-137 (315)
66 d1lw7a2 c.37.1.1 (A:220-411) T 96.8 0.00057 4.1E-08 38.0 3.9 26 172-197 7-32 (192)
67 d1xp8a1 c.37.1.11 (A:15-282) R 96.8 0.0092 6.7E-07 30.5 10.0 86 171-263 56-147 (268)
68 d1rz3a_ c.37.1.6 (A:) Hypothet 96.7 0.0027 2E-07 33.8 6.7 41 159-199 6-49 (198)
69 d1pgva_ c.10.1.1 (A:) Tropomod 96.7 0.0027 2E-07 33.8 6.6 15 540-554 42-56 (167)
70 d1ofha_ c.37.1.20 (A:) HslU {H 96.6 0.0013 9.7E-08 35.7 5.0 46 152-197 15-74 (309)
71 d1m8pa3 c.37.1.15 (A:391-573) 96.5 0.002 1.4E-07 34.7 5.1 38 171-209 5-42 (183)
72 d1pgva_ c.10.1.1 (A:) Tropomod 96.5 0.0023 1.7E-07 34.2 5.3 12 564-575 44-55 (167)
73 d1ukza_ c.37.1.1 (A:) Uridylat 96.4 0.012 8.8E-07 29.8 8.8 28 170-197 6-33 (196)
74 d1xpua3 c.37.1.11 (A:129-417) 96.4 0.0078 5.7E-07 31.0 7.8 97 162-262 32-141 (289)
75 d1np6a_ c.37.1.10 (A:) Molybdo 96.4 0.0014 1.1E-07 35.5 4.1 28 172-199 2-29 (170)
76 d1u94a1 c.37.1.11 (A:6-268) Re 96.4 0.017 1.2E-06 28.9 9.5 83 172-261 54-142 (263)
77 d1ihua2 c.37.1.10 (A:308-586) 96.4 0.003 2.2E-07 33.6 5.4 52 160-213 8-59 (279)
78 d1kaga_ c.37.1.2 (A:) Shikimat 96.4 0.001 7.5E-08 36.4 2.9 25 173-197 3-27 (169)
79 d2bdta1 c.37.1.25 (A:1-176) Hy 96.3 0.0017 1.2E-07 35.1 3.7 25 173-197 3-27 (176)
80 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.3 0.0015 1.1E-07 35.3 3.5 27 173-199 2-28 (189)
81 d1tf7a2 c.37.1.11 (A:256-497) 96.3 0.015 1.1E-06 29.2 8.6 41 171-213 25-65 (242)
82 d1cp2a_ c.37.1.10 (A:) Nitroge 96.2 0.0022 1.6E-07 34.4 4.1 38 173-212 2-39 (269)
83 d2p67a1 c.37.1.10 (A:1-327) LA 96.2 0.0096 7E-07 30.4 7.3 64 160-225 40-107 (327)
84 d2qm8a1 c.37.1.10 (A:5-327) Me 96.2 0.01 7.3E-07 30.3 7.3 41 159-199 36-78 (323)
85 d2gnoa2 c.37.1.20 (A:11-208) g 96.2 0.022 1.6E-06 28.1 9.5 87 159-263 2-91 (198)
86 d1khta_ c.37.1.1 (A:) Adenylat 96.2 0.0022 1.6E-07 34.3 3.8 27 173-199 2-28 (190)
87 d1ly1a_ c.37.1.1 (A:) Polynucl 96.1 0.0022 1.6E-07 34.4 3.7 24 173-196 3-26 (152)
88 d1gvnb_ c.37.1.21 (B:) Plasmid 96.1 0.0053 3.9E-07 32.0 5.6 41 158-198 13-58 (273)
89 d1x6va3 c.37.1.4 (A:34-228) Ad 96.1 0.0031 2.3E-07 33.4 4.4 28 172-199 19-46 (195)
90 d1io0a_ c.10.1.1 (A:) Tropomod 96.1 0.0064 4.7E-07 31.5 5.8 17 539-555 43-59 (166)
91 d1rkba_ c.37.1.1 (A:) Adenylat 96.0 0.0025 1.8E-07 34.0 3.4 25 173-197 5-29 (173)
92 d1g8pa_ c.37.1.20 (A:) ATPase 96.0 0.0032 2.3E-07 33.4 3.9 47 149-195 5-51 (333)
93 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.0 0.0034 2.4E-07 33.2 4.0 29 169-197 3-31 (194)
94 d1xjca_ c.37.1.10 (A:) Molybdo 95.9 0.0035 2.5E-07 33.1 4.0 28 173-200 2-29 (165)
95 d1bifa1 c.37.1.7 (A:37-249) 6- 95.9 0.0035 2.6E-07 33.1 4.0 27 173-199 3-29 (213)
96 d1okkd2 c.37.1.10 (D:97-303) G 95.9 0.031 2.2E-06 27.3 9.2 61 170-232 4-65 (207)
97 d2afhe1 c.37.1.10 (E:1-289) Ni 95.9 0.0041 3E-07 32.7 4.2 41 172-214 2-42 (289)
98 d1ls1a2 c.37.1.10 (A:89-295) G 95.8 0.033 2.4E-06 27.0 9.7 61 170-232 8-69 (207)
99 d1ihua1 c.37.1.10 (A:1-296) Ar 95.8 0.014 9.9E-07 29.5 6.4 48 168-217 4-51 (296)
100 d1nn5a_ c.37.1.1 (A:) Thymidyl 95.8 0.034 2.5E-06 26.9 8.6 32 172-204 3-34 (209)
101 d2iyva1 c.37.1.2 (A:2-166) Shi 95.7 0.0036 2.6E-07 33.0 3.2 25 175-199 4-28 (165)
102 d1ckea_ c.37.1.1 (A:) CMP kina 95.7 0.0055 4E-07 31.9 4.1 42 172-226 3-44 (225)
103 d1viaa_ c.37.1.2 (A:) Shikimat 95.7 0.0035 2.6E-07 33.1 3.1 24 175-198 3-26 (161)
104 d2qy9a2 c.37.1.10 (A:285-495) 95.7 0.038 2.7E-06 26.7 9.8 61 169-232 6-68 (211)
105 d1sq5a_ c.37.1.6 (A:) Pantothe 95.7 0.038 2.8E-06 26.7 9.4 28 170-197 78-105 (308)
106 d1qhxa_ c.37.1.3 (A:) Chloramp 95.6 0.0049 3.5E-07 32.2 3.5 26 172-197 3-28 (178)
107 d1m7ga_ c.37.1.4 (A:) Adenosin 95.6 0.035 2.6E-06 26.9 7.9 30 168-197 20-49 (208)
108 d1y63a_ c.37.1.1 (A:) Probable 95.6 0.0058 4.2E-07 31.7 3.9 27 171-197 4-30 (174)
109 d1knqa_ c.37.1.17 (A:) Glucona 95.5 0.0068 4.9E-07 31.3 4.2 28 170-197 4-31 (171)
110 d1nksa_ c.37.1.1 (A:) Adenylat 95.5 0.0065 4.7E-07 31.5 4.1 27 173-199 2-28 (194)
111 d1fx0a3 c.37.1.11 (A:97-372) C 95.5 0.035 2.5E-06 26.9 7.8 86 173-260 68-168 (276)
112 d1e6ca_ c.37.1.2 (A:) Shikimat 95.5 0.0042 3E-07 32.6 3.0 26 173-198 3-28 (170)
113 d1odfa_ c.37.1.6 (A:) Hypothet 95.5 0.038 2.8E-06 26.6 7.9 80 171-250 26-113 (286)
114 d1uj2a_ c.37.1.6 (A:) Uridine- 95.4 0.0058 4.2E-07 31.7 3.6 27 173-199 3-29 (213)
115 d1io0a_ c.10.1.1 (A:) Tropomod 95.4 0.014 1E-06 29.4 5.4 36 561-596 43-83 (166)
116 d1szpa2 c.37.1.11 (A:145-395) 95.4 0.04 2.9E-06 26.6 7.7 89 171-260 33-138 (251)
117 d1q3ta_ c.37.1.1 (A:) CMP kina 95.2 0.0078 5.7E-07 31.0 3.6 41 173-226 4-44 (223)
118 d1j8yf2 c.37.1.10 (F:87-297) G 95.2 0.055 4E-06 25.7 9.8 62 169-232 9-71 (211)
119 d1zp6a1 c.37.1.25 (A:6-181) Hy 95.0 0.0085 6.2E-07 30.7 3.4 26 171-196 3-28 (176)
120 d1ak2a1 c.37.1.1 (A:14-146,A:1 95.0 0.012 8.4E-07 29.9 3.9 27 170-197 2-28 (190)
121 d1ye8a1 c.37.1.11 (A:1-178) Hy 94.9 0.01 7.3E-07 30.3 3.5 25 174-198 2-26 (178)
122 d1teva_ c.37.1.1 (A:) UMP/CMP 94.9 0.011 8.2E-07 30.0 3.6 25 173-197 2-26 (194)
123 d1lvga_ c.37.1.1 (A:) Guanylat 94.8 0.0091 6.6E-07 30.5 3.0 25 173-197 1-25 (190)
124 d1ny5a2 c.37.1.20 (A:138-384) 94.8 0.02 1.5E-06 28.4 4.8 46 152-197 1-48 (247)
125 d1gkya_ c.37.1.1 (A:) Guanylat 94.7 0.01 7.3E-07 30.3 3.0 26 173-198 2-27 (186)
126 d1hyqa_ c.37.1.10 (A:) Cell di 94.6 0.029 2.1E-06 27.4 5.2 39 172-212 1-40 (232)
127 d1um8a_ c.37.1.20 (A:) ClpX {H 94.6 0.029 2.1E-06 27.4 5.2 26 171-196 67-92 (364)
128 d1yj5a2 c.37.1.1 (A:351-522) 5 94.6 0.0098 7.1E-07 30.3 2.8 26 170-195 12-37 (172)
129 d1svma_ c.37.1.20 (A:) Papillo 94.5 0.046 3.3E-06 26.2 6.1 44 155-198 135-180 (362)
130 d1gsia_ c.37.1.1 (A:) Thymidyl 94.5 0.074 5.4E-06 24.9 7.1 27 174-200 2-28 (208)
131 d1pzna2 c.37.1.11 (A:96-349) D 94.5 0.082 6E-06 24.6 7.2 50 171-220 35-88 (254)
132 d1a7ja_ c.37.1.6 (A:) Phosphor 94.3 0.04 2.9E-06 26.5 5.4 28 171-198 3-30 (288)
133 d1vmaa2 c.37.1.10 (A:82-294) G 94.3 0.091 6.6E-06 24.3 10.7 61 170-232 9-70 (213)
134 d1zina1 c.37.1.1 (A:1-125,A:16 94.1 0.02 1.4E-06 28.5 3.4 24 174-197 2-25 (182)
135 d3adka_ c.37.1.1 (A:) Adenylat 94.1 0.023 1.7E-06 28.1 3.7 27 171-197 7-33 (194)
136 d2ocpa1 c.37.1.1 (A:37-277) De 94.1 0.023 1.7E-06 28.0 3.8 27 171-197 1-27 (241)
137 d2ak3a1 c.37.1.1 (A:0-124,A:16 94.0 0.019 1.4E-06 28.6 3.2 25 173-197 7-31 (189)
138 d1znwa1 c.37.1.1 (A:20-201) Gu 94.0 0.022 1.6E-06 28.1 3.5 25 173-197 3-27 (182)
139 d1yrba1 c.37.1.10 (A:1-244) AT 94.0 0.027 2E-06 27.6 3.9 25 174-198 2-26 (244)
140 d2cdna1 c.37.1.1 (A:1-181) Ade 93.9 0.022 1.6E-06 28.2 3.4 24 174-197 2-25 (181)
141 d1uf9a_ c.37.1.1 (A:) Dephosph 93.9 0.018 1.3E-06 28.7 3.0 23 171-193 2-24 (191)
142 d1w44a_ c.37.1.11 (A:) NTPase 93.9 0.032 2.3E-06 27.1 4.2 71 173-263 124-194 (321)
143 d1zaka1 c.37.1.1 (A:3-127,A:15 93.9 0.022 1.6E-06 28.2 3.4 24 174-197 5-28 (189)
144 d1g3qa_ c.37.1.10 (A:) Cell di 93.9 0.032 2.4E-06 27.1 4.2 43 172-216 2-46 (237)
145 d1tmka_ c.37.1.1 (A:) Thymidyl 93.8 0.078 5.7E-06 24.7 6.1 29 171-199 2-30 (214)
146 d1kgda_ c.37.1.1 (A:) Guanylat 93.8 0.023 1.7E-06 28.1 3.4 26 172-197 3-28 (178)
147 d1s3ga1 c.37.1.1 (A:1-125,A:16 93.8 0.027 2E-06 27.6 3.6 24 174-197 2-25 (182)
148 d2jdia3 c.37.1.11 (A:95-379) C 93.7 0.12 8.5E-06 23.6 10.0 99 162-260 57-177 (285)
149 d4tmka_ c.37.1.1 (A:) Thymidyl 93.6 0.12 8.6E-06 23.6 6.7 35 173-208 3-37 (210)
150 d2vp4a1 c.37.1.1 (A:12-208) De 93.3 0.018 1.3E-06 28.7 2.1 27 170-196 7-33 (197)
151 d1byia_ c.37.1.10 (A:) Dethiob 93.2 0.05 3.6E-06 25.9 4.2 27 173-199 2-29 (224)
152 d1p5zb_ c.37.1.1 (B:) Deoxycyt 93.2 0.014 9.9E-07 29.5 1.3 26 172-197 2-27 (241)
153 d1e4va1 c.37.1.1 (A:1-121,A:15 93.0 0.037 2.7E-06 26.7 3.4 24 174-197 2-25 (179)
154 d1akya1 c.37.1.1 (A:3-130,A:16 93.0 0.042 3.1E-06 26.4 3.6 25 172-197 3-27 (180)
155 d1s96a_ c.37.1.1 (A:) Guanylat 92.8 0.044 3.2E-06 26.3 3.5 25 173-197 3-27 (205)
156 d1v5wa_ c.37.1.11 (A:) Meiotic 92.4 0.18 1.3E-05 22.5 7.6 49 171-219 36-88 (258)
157 d1w36d1 c.37.1.19 (D:2-360) Ex 92.0 0.19 1.4E-05 22.4 5.8 64 157-223 151-215 (359)
158 d1zj6a1 c.37.1.8 (A:2-178) ADP 91.7 0.12 8.8E-06 23.5 4.7 34 161-195 5-38 (177)
159 d1r0wa_ c.37.1.12 (A:) Cystic 91.7 0.063 4.6E-06 25.3 3.2 28 170-197 60-87 (281)
160 d1svia_ c.37.1.8 (A:) Probable 91.4 0.071 5.1E-06 25.0 3.2 27 169-195 20-46 (195)
161 d3b60a1 c.37.1.12 (A:329-581) 91.4 0.065 4.7E-06 25.2 3.0 27 171-197 40-66 (253)
162 d1vhta_ c.37.1.1 (A:) Dephosph 91.4 0.065 4.7E-06 25.2 3.0 19 174-192 5-23 (208)
163 d1r8sa_ c.37.1.8 (A:) ADP-ribo 91.3 0.078 5.7E-06 24.7 3.3 23 174-196 2-24 (160)
164 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 91.3 0.13 9.3E-06 23.4 4.4 33 163-195 3-36 (186)
165 d1g2912 c.37.1.12 (1:1-240) Ma 91.2 0.076 5.5E-06 24.8 3.2 27 171-197 28-54 (240)
166 d2pmka1 c.37.1.12 (A:467-707) 91.2 0.07 5.1E-06 25.0 3.0 27 171-197 28-54 (241)
167 d1b0ua_ c.37.1.12 (A:) ATP-bin 91.2 0.072 5.2E-06 24.9 3.0 35 171-208 27-61 (258)
168 d2a5ja1 c.37.1.8 (A:9-181) Rab 91.0 0.071 5.2E-06 25.0 2.8 22 174-195 5-26 (173)
169 d1deka_ c.37.1.1 (A:) Deoxynuc 90.9 0.1 7.5E-06 24.0 3.6 24 173-196 2-25 (241)
170 d1upta_ c.37.1.8 (A:) ADP-ribo 90.9 0.074 5.4E-06 24.9 2.8 24 174-197 7-30 (169)
171 d1jj7a_ c.37.1.12 (A:) Peptide 90.8 0.082 6E-06 24.6 3.0 28 170-197 38-65 (251)
172 d1z06a1 c.37.1.8 (A:32-196) Ra 90.8 0.074 5.4E-06 24.9 2.8 23 174-196 4-26 (165)
173 d1mv5a_ c.37.1.12 (A:) Multidr 90.8 0.088 6.4E-06 24.4 3.2 27 170-196 26-52 (242)
174 d1z0fa1 c.37.1.8 (A:8-173) Rab 90.8 0.075 5.5E-06 24.8 2.8 23 174-196 6-28 (166)
175 d1n0wa_ c.37.1.11 (A:) DNA rep 90.7 0.28 2E-05 21.3 6.9 49 172-220 23-75 (242)
176 d1htwa_ c.37.1.18 (A:) Hypothe 90.6 0.28 2E-05 21.3 5.9 31 170-200 31-61 (158)
177 d1jjva_ c.37.1.1 (A:) Dephosph 90.6 0.086 6.2E-06 24.5 3.0 20 173-192 3-22 (205)
178 d1nlfa_ c.37.1.11 (A:) Hexamer 90.5 0.14 1E-05 23.2 4.0 26 173-198 30-55 (274)
179 d1svsa1 c.37.1.8 (A:32-60,A:18 90.4 0.11 7.7E-06 23.9 3.3 24 174-197 4-27 (195)
180 d1z2aa1 c.37.1.8 (A:8-171) Rab 90.4 0.099 7.2E-06 24.1 3.1 22 174-195 4-25 (164)
181 d1l2ta_ c.37.1.12 (A:) MJ0796 90.4 0.081 5.9E-06 24.6 2.7 35 171-208 30-64 (230)
182 d3dhwc1 c.37.1.12 (C:1-240) Me 90.3 0.082 5.9E-06 24.6 2.7 27 171-197 30-56 (240)
183 d2bv3a2 c.37.1.8 (A:7-282) Elo 90.2 0.12 9E-06 23.5 3.5 29 170-198 4-32 (276)
184 d1yzqa1 c.37.1.8 (A:14-177) Ra 90.2 0.091 6.6E-06 24.3 2.8 23 174-196 2-24 (164)
185 d2awna2 c.37.1.12 (A:4-235) Ma 90.2 0.11 7.9E-06 23.9 3.2 35 171-208 25-59 (232)
186 d1tf7a1 c.37.1.11 (A:14-255) C 90.1 0.31 2.3E-05 21.0 7.7 41 171-213 25-66 (242)
187 d1z08a1 c.37.1.8 (A:17-183) Ra 90.1 0.11 7.7E-06 23.9 3.1 22 174-195 5-26 (167)
188 d1v43a3 c.37.1.12 (A:7-245) Hy 90.1 0.11 8.1E-06 23.8 3.2 27 171-197 31-57 (239)
189 d1sgwa_ c.37.1.12 (A:) Putativ 90.1 0.068 5E-06 25.1 2.1 27 171-197 26-52 (200)
190 d3raba_ c.37.1.8 (A:) Rab3a {R 90.0 0.096 7E-06 24.2 2.8 22 174-195 7-28 (169)
191 d1g41a_ c.37.1.20 (A:) HslU {H 90.0 0.11 8.3E-06 23.7 3.2 26 173-198 50-75 (443)
192 d1z0ja1 c.37.1.8 (A:2-168) Rab 90.0 0.096 7E-06 24.2 2.8 23 174-196 6-28 (167)
193 d2ew1a1 c.37.1.8 (A:4-174) Rab 90.0 0.097 7.1E-06 24.1 2.8 24 173-196 6-29 (171)
194 d1r2qa_ c.37.1.8 (A:) Rab5a {H 89.9 0.11 8.3E-06 23.7 3.1 23 174-196 8-30 (170)
195 d1p6xa_ c.37.1.1 (A:) Thymidin 89.9 0.13 9.5E-06 23.4 3.4 28 172-199 6-33 (333)
196 d3d31a2 c.37.1.12 (A:1-229) Su 89.8 0.11 8E-06 23.8 3.0 27 171-197 25-51 (229)
197 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 89.8 0.12 8.8E-06 23.6 3.2 24 173-196 3-26 (177)
198 d2i1qa2 c.37.1.11 (A:65-322) D 89.8 0.33 2.4E-05 20.8 10.5 55 172-227 34-102 (258)
199 d2fn4a1 c.37.1.8 (A:24-196) r- 89.8 0.12 8.4E-06 23.7 3.1 23 173-195 7-29 (173)
200 d2bcgy1 c.37.1.8 (Y:3-196) GTP 89.8 0.12 8.5E-06 23.6 3.1 23 174-196 8-30 (194)
201 d2atva1 c.37.1.8 (A:5-172) Ras 89.8 0.1 7.5E-06 24.0 2.8 23 174-196 4-26 (168)
202 d2bmea1 c.37.1.8 (A:6-179) Rab 89.8 0.1 7.5E-06 24.0 2.8 22 174-195 7-28 (174)
203 d1xtqa1 c.37.1.8 (A:3-169) GTP 89.7 0.12 8.5E-06 23.6 3.1 24 172-195 4-27 (167)
204 d2gjsa1 c.37.1.8 (A:91-258) Ra 89.7 0.095 6.9E-06 24.2 2.6 22 174-195 3-24 (168)
205 d1kaoa_ c.37.1.8 (A:) Rap2a {H 89.7 0.1 7.6E-06 23.9 2.8 23 174-196 5-27 (167)
206 d2erxa1 c.37.1.8 (A:6-176) di- 89.7 0.096 7E-06 24.2 2.6 22 174-195 4-25 (171)
207 d2onka1 c.37.1.12 (A:1-240) Mo 89.5 0.13 9.4E-06 23.4 3.2 33 173-208 25-57 (240)
208 d2atxa1 c.37.1.8 (A:9-193) Rho 89.5 0.11 8.1E-06 23.8 2.8 23 174-196 11-33 (185)
209 d1mh1a_ c.37.1.8 (A:) Rac {Hum 89.4 0.11 8.4E-06 23.7 2.8 23 174-196 7-29 (183)
210 d1c1ya_ c.37.1.8 (A:) Rap1A {H 89.4 0.13 9.6E-06 23.3 3.1 23 174-196 5-27 (167)
211 d1g16a_ c.37.1.8 (A:) Rab-rela 89.3 0.13 9.7E-06 23.3 3.1 22 174-195 4-25 (166)
212 d1ky3a_ c.37.1.8 (A:) Rab-rela 89.3 0.12 8.5E-06 23.6 2.8 22 174-195 4-25 (175)
213 d2f7sa1 c.37.1.8 (A:5-190) Rab 89.3 0.095 6.9E-06 24.2 2.3 22 174-195 7-28 (186)
214 d1ksha_ c.37.1.8 (A:) ADP-ribo 89.3 0.12 8.6E-06 23.6 2.8 22 174-195 4-25 (165)
215 d2fh5b1 c.37.1.8 (B:63-269) Si 89.2 0.15 1.1E-05 22.9 3.4 24 173-196 1-24 (207)
216 d2erya1 c.37.1.8 (A:10-180) r- 89.2 0.12 8.7E-06 23.6 2.8 23 174-196 7-29 (171)
217 d1zcba2 c.37.1.8 (A:47-75,A:20 89.1 0.12 8.9E-06 23.5 2.8 20 174-193 4-23 (200)
218 d1wf3a1 c.37.1.8 (A:3-180) GTP 89.0 0.13 9.6E-06 23.3 2.9 25 171-195 4-28 (178)
219 d1fzqa_ c.37.1.8 (A:) ADP-ribo 88.9 0.13 9.2E-06 23.4 2.8 23 173-195 17-39 (176)
220 d2f9la1 c.37.1.8 (A:8-182) Rab 88.9 0.15 1.1E-05 22.9 3.1 23 173-195 5-27 (175)
221 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 88.8 0.16 1.2E-05 22.8 3.3 22 174-195 4-25 (200)
222 d2g6ba1 c.37.1.8 (A:58-227) Ra 88.8 0.15 1.1E-05 22.9 3.1 23 174-196 8-30 (170)
223 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 88.8 0.14 9.8E-06 23.2 2.8 23 174-196 5-27 (170)
224 d1nija1 c.37.1.10 (A:2-223) Hy 88.6 0.15 1.1E-05 22.9 3.0 26 170-195 1-26 (222)
225 d1ctqa_ c.37.1.8 (A:) cH-p21 R 88.6 0.14 1E-05 23.2 2.7 23 174-196 5-27 (166)
226 d1m7ba_ c.37.1.8 (A:) RhoE (RN 88.4 0.17 1.2E-05 22.7 3.1 23 174-196 4-26 (179)
227 d1vpla_ c.37.1.12 (A:) Putativ 88.3 0.16 1.2E-05 22.7 3.0 27 171-197 27-53 (238)
228 d1oxxk2 c.37.1.12 (K:1-242) Gl 88.3 0.13 9.2E-06 23.4 2.4 27 171-197 30-56 (242)
229 d1u0la2 c.37.1.8 (A:69-293) Pr 88.3 0.32 2.3E-05 20.9 4.5 33 160-195 86-118 (225)
230 d2dy1a2 c.37.1.8 (A:8-274) Elo 88.2 0.25 1.8E-05 21.6 3.9 24 172-195 2-25 (267)
231 d1g6ha_ c.37.1.12 (A:) MJ1267 88.2 0.15 1.1E-05 23.0 2.7 27 171-197 29-55 (254)
232 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 88.1 0.18 1.3E-05 22.5 3.1 22 174-195 4-25 (184)
233 d2ngra_ c.37.1.8 (A:) CDC42 {H 88.1 0.16 1.1E-05 22.8 2.8 23 174-196 5-27 (191)
234 d1azta2 c.37.1.8 (A:35-65,A:20 88.0 0.21 1.5E-05 22.1 3.4 24 172-195 6-29 (221)
235 d1udxa2 c.37.1.8 (A:157-336) O 88.0 0.12 8.9E-06 23.5 2.2 21 175-195 4-24 (180)
236 d2g3ya1 c.37.1.8 (A:73-244) GT 88.0 0.17 1.2E-05 22.6 2.9 22 174-195 5-26 (172)
237 d1mkya1 c.37.1.8 (A:2-172) Pro 88.0 0.19 1.4E-05 22.3 3.2 22 174-195 2-23 (171)
238 d1ji0a_ c.37.1.12 (A:) Branche 87.9 0.18 1.3E-05 22.4 3.0 27 171-197 31-57 (240)
239 d1nrjb_ c.37.1.8 (B:) Signal r 87.8 0.22 1.6E-05 22.0 3.4 23 173-195 4-26 (209)
240 d1x3sa1 c.37.1.8 (A:2-178) Rab 87.8 0.19 1.4E-05 22.3 3.1 23 174-196 9-31 (177)
241 d1u8za_ c.37.1.8 (A:) Ras-rela 87.8 0.22 1.6E-05 22.0 3.4 25 172-196 4-28 (168)
242 d2bmja1 c.37.1.8 (A:66-240) Ce 87.6 0.21 1.5E-05 22.0 3.2 23 174-196 7-29 (175)
243 d1egaa1 c.37.1.8 (A:4-182) GTP 87.5 0.2 1.4E-05 22.2 3.0 25 171-195 4-28 (179)
244 d1x1ra1 c.37.1.8 (A:10-178) Ra 87.3 0.19 1.4E-05 22.3 2.8 23 174-196 6-28 (169)
245 d2hyda1 c.37.1.12 (A:324-578) 87.2 0.14 1.1E-05 23.1 2.2 27 170-196 42-68 (255)
246 d1wmsa_ c.37.1.8 (A:) Rab9a {H 86.9 0.24 1.7E-05 21.8 3.1 22 174-195 8-29 (174)
247 d1zd9a1 c.37.1.8 (A:18-181) AD 86.7 0.24 1.8E-05 21.6 3.1 22 174-195 4-25 (164)
248 d2qtvb1 c.37.1.8 (B:24-189) SA 86.7 0.27 2E-05 21.3 3.4 22 174-195 2-23 (166)
249 d1e0sa_ c.37.1.8 (A:) ADP-ribo 86.1 0.37 2.7E-05 20.5 3.8 26 169-195 10-35 (173)
250 d1i2ma_ c.37.1.8 (A:) Ran {Hum 85.6 0.12 8.9E-06 23.5 1.1 23 174-196 5-27 (170)
251 d1e2ka_ c.37.1.1 (A:) Thymidin 85.5 0.22 1.6E-05 22.0 2.4 26 172-197 4-29 (329)
252 d1l7vc_ c.37.1.12 (C:) ABC tra 85.5 0.2 1.4E-05 22.2 2.1 24 171-194 24-47 (231)
253 d2cxxa1 c.37.1.8 (A:2-185) GTP 85.3 0.28 2.1E-05 21.3 2.9 22 174-195 2-23 (184)
254 d1osna_ c.37.1.1 (A:) Thymidin 85.3 0.21 1.5E-05 22.0 2.2 26 173-198 6-31 (331)
255 d1lnza2 c.37.1.8 (A:158-342) O 85.2 0.2 1.5E-05 22.2 2.1 22 173-194 2-23 (185)
256 d1moza_ c.37.1.8 (A:) ADP-ribo 85.2 0.19 1.4E-05 22.3 1.9 26 169-194 14-39 (182)
257 d1mkya2 c.37.1.8 (A:173-358) P 84.5 0.29 2.1E-05 21.2 2.6 23 174-196 10-32 (186)
258 d2fu5c1 c.37.1.8 (C:3-175) Rab 84.0 0.19 1.4E-05 22.4 1.5 23 173-195 7-29 (173)
259 d1h65a_ c.37.1.8 (A:) Chloropl 83.9 0.71 5.2E-05 18.8 4.9 39 158-196 16-56 (257)
260 d1puia_ c.37.1.8 (A:) Probable 83.3 0.26 1.9E-05 21.4 2.0 26 169-194 13-38 (188)
261 d2gj8a1 c.37.1.8 (A:216-376) P 83.0 0.42 3.1E-05 20.2 2.9 22 174-195 3-24 (161)
262 d1n0ua2 c.37.1.8 (A:3-343) Elo 82.7 0.77 5.6E-05 18.6 4.2 28 169-196 14-41 (341)
263 d1g6oa_ c.37.1.11 (A:) Hexamer 82.4 0.6 4.4E-05 19.2 3.6 25 173-197 167-191 (323)
264 d1f5na2 c.37.1.8 (A:7-283) Int 81.8 0.69 5E-05 18.9 3.7 34 162-196 23-56 (277)
265 d1kkma_ c.91.1.2 (A:) HPr kina 81.4 0.52 3.8E-05 19.6 2.9 35 173-210 15-51 (176)
266 d1g7sa4 c.37.1.8 (A:1-227) Ini 80.7 0.74 5.4E-05 18.6 3.5 24 173-196 6-29 (227)
267 d1xzpa2 c.37.1.8 (A:212-371) T 79.2 0.23 1.7E-05 21.8 0.5 23 174-196 2-24 (160)
268 g1f2t.1 c.37.1.12 (A:,B:) Rad5 78.9 0.85 6.2E-05 18.3 3.4 23 172-194 23-45 (292)
269 d1ko7a2 c.91.1.2 (A:130-298) H 78.7 0.72 5.3E-05 18.7 3.0 34 173-209 16-51 (169)
270 d1uaaa1 c.37.1.19 (A:2-307) DE 78.6 1.1 7.9E-05 17.6 5.6 52 173-226 15-69 (306)
271 d1jala1 c.37.1.8 (A:1-278) Ych 78.5 0.72 5.2E-05 18.7 2.9 23 174-196 4-26 (278)
272 d1knxa2 c.91.1.2 (A:133-309) H 78.3 0.6 4.3E-05 19.2 2.4 23 173-195 16-38 (177)
273 d1cr2a_ c.37.1.11 (A:) Gene 4 76.7 1.2 8.9E-05 17.3 9.4 52 173-227 36-87 (277)
274 d1pjra1 c.37.1.19 (A:1-318) DE 75.1 1.3 9.8E-05 17.0 5.5 63 157-225 13-78 (318)
275 d1t9ha2 c.37.1.8 (A:68-298) Pr 74.8 0.55 4E-05 19.4 1.5 32 161-195 89-120 (231)
276 d2c78a3 c.37.1.8 (A:9-212) Elo 74.3 1.3 9.7E-05 17.1 3.3 22 174-195 5-26 (204)
277 d1ni3a1 c.37.1.8 (A:11-306) Yc 74.0 1.2 9E-05 17.3 3.1 23 174-196 12-34 (296)
278 d1tuea_ c.37.1.20 (A:) Replica 70.4 1.7 0.00013 16.3 4.5 38 160-197 40-78 (205)
279 d1tq4a_ c.37.1.8 (A:) Interfer 70.0 1.8 0.00013 16.3 4.5 22 173-194 57-78 (400)
280 d1wb1a4 c.37.1.8 (A:1-179) Elo 69.8 1.5 0.00011 16.7 2.8 21 174-194 7-27 (179)
281 d1p9ra_ c.37.1.11 (A:) Extrace 69.4 1.8 0.00013 16.2 5.5 43 155-197 141-183 (401)
282 d1wxqa1 c.37.1.8 (A:1-319) GTP 69.2 1.6 0.00012 16.6 2.8 22 174-195 2-23 (319)
283 g1ii8.1 c.37.1.12 (A:,B:) Rad5 66.4 2.1 0.00015 15.8 3.4 22 173-194 24-45 (369)
284 d1puja_ c.37.1.8 (A:) Probable 66.2 1.4 9.9E-05 17.0 1.9 26 171-196 111-136 (273)
285 g1xew.1 c.37.1.12 (X:,Y:) Smc 65.0 1.8 0.00013 16.2 2.4 22 173-194 27-48 (329)
286 d1u0ja_ c.37.1.20 (A:) Rep 40 61.4 2.6 0.00019 15.3 5.2 38 159-196 89-128 (267)
287 d1e9ra_ c.37.1.11 (A:) Bacteri 60.0 2.8 0.0002 15.1 3.3 26 172-197 50-75 (433)
288 d2olra1 c.91.1.1 (A:228-540) P 59.1 2.9 0.00021 15.0 2.5 18 173-190 15-32 (313)
289 d1j3ba1 c.91.1.1 (A:212-529) P 55.0 3.3 0.00024 14.6 2.7 19 173-191 15-33 (318)
290 d1ii2a1 c.91.1.1 (A:201-523) P 53.4 3.5 0.00026 14.4 2.5 18 173-190 15-32 (323)
291 d1d2ea3 c.37.1.8 (A:55-250) El 53.1 3.6 0.00026 14.4 2.8 21 174-194 5-25 (196)
292 d1qhla_ c.37.1.12 (A:) Cell di 52.8 1.6 0.00012 16.6 0.4 24 173-196 25-48 (222)
293 d1jnya3 c.37.1.8 (A:4-227) Elo 52.8 3.6 0.00026 14.4 3.3 24 174-197 5-28 (224)
294 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 51.4 3.8 0.00028 14.2 5.5 66 157-227 13-80 (623)
295 d1gm5a3 c.37.1.19 (A:286-549) 41.5 5.4 0.00039 13.3 5.0 43 155-197 87-129 (264)
296 d1zunb3 c.37.1.8 (B:16-237) Su 41.1 5.5 0.0004 13.2 3.6 27 171-197 8-34 (222)
297 d1r5ba3 c.37.1.8 (A:215-459) E 39.9 5.7 0.00042 13.1 2.5 23 174-196 26-48 (245)
298 d1e69a_ c.37.1.12 (A:) Smc hea 39.8 5.8 0.00042 13.1 1.9 21 173-193 25-45 (308)
299 d2qn6a3 c.37.1.8 (A:2-206) Ini 38.4 6.1 0.00044 13.0 2.8 21 174-194 10-30 (205)
300 d1kk1a3 c.37.1.8 (A:6-200) Ini 37.2 6.3 0.00046 12.8 2.8 21 174-194 7-27 (195)
301 d1f60a3 c.37.1.8 (A:2-240) Elo 36.8 6.4 0.00047 12.8 3.2 24 174-197 8-31 (239)
302 d1a1va1 c.37.1.14 (A:190-325) 34.3 7 0.00051 12.6 5.0 52 171-228 7-58 (136)
303 d1w1wa_ c.37.1.12 (A:) Smc hea 33.0 7.4 0.00054 12.4 3.2 22 173-194 26-47 (427)
304 d1p3da1 c.5.1.1 (A:11-106) UDP 27.4 9.2 0.00067 11.8 3.9 26 171-196 7-32 (96)
305 d2eyqa3 c.37.1.19 (A:546-778) 25.1 10 0.00074 11.6 10.6 45 153-197 57-101 (233)
306 d1j6ua3 c.72.2.1 (A:89-295) UD 21.6 12 0.00087 11.2 3.8 34 163-198 5-38 (207)
307 d1o5za2 c.72.2.2 (A:-2-293) Fo 20.9 12 0.00089 11.1 4.8 37 160-198 29-67 (296)
No 1
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=4.6e-40 Score=262.52 Aligned_cols=217 Identities=11% Similarity=0.059 Sum_probs=166.4
Q ss_pred CCCCHHHHHHHHHHHHH---CCCCEEEEEECCCCCHHHHHHHHHHHHHH--HCCCCCEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 11352899999999970---79932999991798539999999999844--42676549999974860799999999999
Q 001860 152 HFQSRKCTLKEILDALS---NRKFNMIGVYGMGGVGKTTLVKEVGRKAK--ENKLFEKVISAHVSRTPQIKKIQEEIAEK 226 (1003)
Q Consensus 152 ~~~gr~~~~~~l~~~l~---~~~~~vi~I~G~gGiGKTtLa~~v~~~~~--~~~~F~~~~wv~vs~~~~~~~i~~~i~~~ 226 (1003)
.++||+.++++|+++|. +...++|+|+||||+||||||+++|++.. .+.+|++++|+++++.++...+...+...
T Consensus 21 ~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~~~ 100 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDIL 100 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHHHH
T ss_pred CEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 62373999999999987346878408999779978889999999985565540127648999936877777899999999
Q ss_pred ---HCCCCH-------HH-HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC-------------C-C-----
Q ss_conf ---199721-------23-4489999999998239849999919998326011024468-------------9-9-----
Q 001860 227 ---MGLRLV-------EE-IETVRAGRLYERLKVEKKILIILDDIWGSLDLEAIGIPLA-------------D-D----- 276 (1003)
Q Consensus 227 ---l~~~~~-------~~-~~~~~~~~l~~~l~~~kr~LiVlDdv~~~~~~~~~~~~~~-------------~-~----- 276 (1003)
++.... .. ........+.+.+. ++|+|+||||||+.++|+.+...-. . .
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~kr~LlVLDDv~~~~~~~~~~~~~srilvTTR~~~v~~~~~~~~~~ 179 (277)
T d2a5yb3 101 LMLKSEDDLLNFPSVEHVTSVVLKRMICNALID-RPNTLFVFDDVVQEETIRWAQELRLRCLVTTRDVEISNAASQTCEF 179 (277)
T ss_dssp HHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTT-STTEEEEEEEECCHHHHHHHHHTTCEEEEEESBGGGGGGCCSCEEE
T ss_pred HHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHC-CCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCCCCCE
T ss_conf 987220220278632123369999999999844-6881675250667766555204575599996448999863788716
Q ss_pred -----CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf -----994899999999729999990359999999999099613799999997059977999999984399888864216
Q 001860 277 -----NSGREAWSLFTKTTGDCIENDELRSVAKDIVKECAGLPIAIVPVARALRNKRLCEWKDALLELRRPSLRNFSGTL 351 (1003)
Q Consensus 277 -----~~~~~~~~lf~~~~~~~~~~~~l~~~~~~I~~~c~glPLai~~~g~~L~~~~~~~w~~~~~~l~~~~~~~~~~~~ 351 (1003)
-..++||+||.+.++.....+..++++++|+++|+|+|||++++|+.|+.++.+.|.+..+.+.... .
T Consensus 180 ~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k~~~~~~~~~~~L~~~~-------~ 252 (277)
T d2a5yb3 180 IEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMFFKSCEPKTFEKMAQLNNKLESRG-------L 252 (277)
T ss_dssp EECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSSSHHHHHHHHHHHHHHC-------S
T ss_pred EECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC-------H
T ss_conf 877889979999999998477667425679999999995899899999999865598999999999973486-------7
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 99864455201467884147788764
Q 001860 352 EVAYKSIELSYSHLNGEELKSTFLLI 377 (1003)
Q Consensus 352 ~~~~~~l~~sy~~L~~~~~k~cfl~~ 377 (1003)
..+.+++.+||++||++ +|+||.++
T Consensus 253 ~~v~~il~~sY~~L~~~-lk~c~~~l 277 (277)
T d2a5yb3 253 VGVECITPYSYKSLAMA-LQRCVEVL 277 (277)
T ss_dssp STTCCCSSSSSSSHHHH-HHHHHHTS
T ss_pred HHHHHHHHHHHHCCCHH-HHHHHHHC
T ss_conf 88999999988512699-99999739
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.92 E-value=3.3e-22 Score=151.45 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=34.7
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCC
Q ss_conf 862299836985646882224896797997347788995233576667777622767853405320887899883447
Q 001860 519 IGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDLSN 596 (1003)
Q Consensus 519 ~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l~~ 596 (1003)
..|+.|+++++.++.+ +.++.+++|++|++++|.++.++.++++++|++|++++|.+..++ .++.+++|+.|++.+
T Consensus 44 ~~l~~L~l~~~~I~~l-~gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~-~l~~l~~L~~L~~~~ 119 (384)
T d2omza2 44 DQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADIT-PLANLTNLTGLTLFN 119 (384)
T ss_dssp TTCCEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCS
T ss_pred CCCCEEECCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCC
T ss_conf 7878998999898776-242458999989681881798863347711010301343332222-111233433344332
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.91 E-value=4.4e-22 Score=150.69 Aligned_cols=80 Identities=18% Similarity=0.276 Sum_probs=34.6
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEEC
Q ss_conf 89679799734778899523357666777762276785340532088789988344787897539355416878878983
Q 001860 540 LLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYI 619 (1003)
Q Consensus 540 ~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l 619 (1003)
.+.+|++|+++++.++++..++.+++|++|++++|.++.+|. ++++++|++|++++ +.+..+++ ++.+++|+.|++
T Consensus 42 ~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~-n~i~~i~~--l~~l~~L~~L~~ 117 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNN-NQIADITP--LANLTNLTGLTL 117 (384)
T ss_dssp HHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCS-SCCCCCGG--GTTCTTCCEEEC
T ss_pred HHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCC-CCCCCCCC--CCCCCCCCCCCC
T ss_conf 957878998999898776242458999989681881798863-34771101030134-33322221--112334333443
Q ss_pred CCCC
Q ss_conf 5897
Q 001860 620 GESP 623 (1003)
Q Consensus 620 ~~~~ 623 (1003)
..+.
T Consensus 118 ~~~~ 121 (384)
T d2omza2 118 FNNQ 121 (384)
T ss_dssp CSSC
T ss_pred CCCC
T ss_conf 3222
No 4
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=6.5e-19 Score=130.96 Aligned_cols=195 Identities=19% Similarity=0.233 Sum_probs=165.4
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 74109991168998789967999920998448999988902231998622998369856468822248967979973477
Q 001860 473 KVCRTISLRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDC 552 (1003)
Q Consensus 473 ~~lr~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~ 552 (1003)
.....++.+++.++.+|..+. ++++.|++++|.+..++...|.++++|++|++++|.+..+|. ++.+++|++|++++|
T Consensus 10 ~~~~~v~C~~~~L~~iP~~lp-~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~N 87 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLTALPPDLP-KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHN 87 (266)
T ss_dssp TTCCEEECTTSCCSSCCSCCC-TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSS
T ss_pred CCCEEEECCCCCCCEECCCCC-CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCC
T ss_conf 898699806999886196757-688989884992898597786345655221356654444311-111223211111222
Q ss_pred CCCC-CCCCCCCCCCCEEECCCCCCCCCC-HHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCC
Q ss_conf 8899-523357666777762276785340-53208878998834478789753935541687887898358976431023
Q 001860 553 QLGD-IAIIGDLKKLEILTLRGSNMQKLV-EEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPIEWVKVE 630 (1003)
Q Consensus 553 ~l~~-~~~l~~l~~L~~L~l~~~~i~~lp-~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~~~~~~~ 630 (1003)
.+.. +..+..+++|++|+++++.+..++ ..+..+.++++|.+.+ +.+..++...+..+++|+.+++++|.+...
T Consensus 88 ~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~-n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~--- 163 (266)
T d1p9ag_ 88 QLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG-NELKTLPPGLLTPTPKLEKLSLANNNLTEL--- 163 (266)
T ss_dssp CCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT-SCCCCCCTTTTTTCTTCCEEECTTSCCSCC---
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCEECCCCCCCCCCCHHCCCCCCCCCCC---
T ss_conf 2211111212222222222222311011001122221111221243-421022123332211100000001565223---
Q ss_pred CCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 4465233447010116889868896135788778432124466489999634
Q 001860 631 GIDGERRNASLHELNHLSKLTSLEILIQDAKTLPRDLSFFKMLRRYRISIGY 682 (1003)
Q Consensus 631 ~~~~~~~~~~l~~L~~l~~L~~L~i~~~~~~~~~~~l~~l~~L~~L~l~~~~ 682 (1003)
....+..+++|+.|++++|.+..+|..+..+++|+.+.++++.
T Consensus 164 ---------~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 164 ---------PAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp ---------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCC
T ss_pred ---------CCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEEECCCC
T ss_conf ---------7200134212423430139785568667778889999836999
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.82 E-value=1.7e-17 Score=122.13 Aligned_cols=101 Identities=20% Similarity=0.298 Sum_probs=50.2
Q ss_pred CCCEEEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCCC--CCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECC
Q ss_conf 862299836985646882-22489679799734778899--523357666777762276785340532088789988344
Q 001860 519 IGLRVLDFTKMHLLALPS-SLGLLQSLQTLSLDDCQLGD--IAIIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDLS 595 (1003)
Q Consensus 519 ~~L~~L~L~~~~~~~lp~-~i~~L~~L~~L~L~~~~l~~--~~~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l~ 595 (1003)
+.+++|++++|.++.+|+ +|.++++|++|++++|.+.. +..+..+++|++|++++|.++.+|.. ....+..|.+.
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~--~~~~l~~L~~~ 108 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK--MPKTLQELRVH 108 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSS--CCTTCCEEECC
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCC--HHHHHHHHHCC
T ss_conf 9979897849918986965760465652311234434452356652798557831568756767640--01113232102
Q ss_pred CCCCCCCCCHHHHHCCCCCCEEECCCC
Q ss_conf 787897539355416878878983589
Q 001860 596 NCSKLKVIPANVISSLSRIEELYIGES 622 (1003)
Q Consensus 596 ~c~~l~~~p~~~l~~l~~L~~L~l~~~ 622 (1003)
. +.+..++...+.....+..+....+
T Consensus 109 ~-n~l~~l~~~~~~~~~~~~~l~~~~n 134 (305)
T d1xkua_ 109 E-NEITKVRKSVFNGLNQMIVVELGTN 134 (305)
T ss_dssp S-SCCCBBCHHHHTTCTTCCEEECCSS
T ss_pred C-CCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 4-6102344445401331100001233
No 6
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.81 E-value=1.9e-16 Score=115.63 Aligned_cols=98 Identities=21% Similarity=0.302 Sum_probs=51.6
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 41099911689987899679999209984489999889022319986229983698564688222489679799734778
Q 001860 474 VCRTISLRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQ 553 (1003)
Q Consensus 474 ~lr~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~ 553 (1003)
.+++|+++++.++.+|+. .++|++|+++++.+..+|.. ..+|+.|+++++.+..++.- .+.|++|++++|.
T Consensus 39 ~l~~LdLs~~~L~~lp~~--~~~L~~L~Ls~N~l~~lp~~----~~~L~~L~l~~n~l~~l~~l---p~~L~~L~L~~n~ 109 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL--PPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNLKALSDL---PPLLEYLGVSNNQ 109 (353)
T ss_dssp TCSEEECTTSCCSCCCSC--CTTCSEEECCSSCCSSCCCC----CTTCCEEECCSSCCSCCCSC---CTTCCEEECCSSC
T ss_pred CCCEEEECCCCCCCCCCC--CCCCCEEECCCCCCCCCCCC----HHHHHHHHHHHCCCCHHHHH---CCCCCCCCCCCCC
T ss_conf 998999379998878898--78988898999979633620----33203326655143203210---2211111334554
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 899523357666777762276785340
Q 001860 554 LGDIAIIGDLKKLEILTLRGSNMQKLV 580 (1003)
Q Consensus 554 l~~~~~l~~l~~L~~L~l~~~~i~~lp 580 (1003)
+...+.++.+++|++|++.++.+...+
T Consensus 110 l~~lp~~~~l~~L~~L~l~~~~~~~~~ 136 (353)
T d1jl5a_ 110 LEKLPELQNSSFLKIIDVDNNSLKKLP 136 (353)
T ss_dssp CSSCCCCTTCTTCCEEECCSSCCSCCC
T ss_pred CCCCCCHHHHCCCEEECCCCCCCCCCC
T ss_conf 322210011013123113565100132
No 7
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.81 E-value=3.7e-16 Score=113.84 Aligned_cols=139 Identities=27% Similarity=0.307 Sum_probs=77.6
Q ss_pred CCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 99209984489999889022319986229983698564688222489679799734778899523357666777762276
Q 001860 495 PQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLRGS 574 (1003)
Q Consensus 495 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~~~ 574 (1003)
.+++.|+++++....+|+ ..++|++|+++++.++.+|.. +.+|+.|++.++.++.++.+. +.|++|++++|
T Consensus 38 ~~l~~LdLs~~~L~~lp~----~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~l~~n~l~~l~~lp--~~L~~L~L~~n 108 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPE----LPPHLESLVASCNSLTELPEL---PQSLKSLLVDNNNLKALSDLP--PLLEYLGVSNN 108 (353)
T ss_dssp HTCSEEECTTSCCSCCCS----CCTTCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCCSCC--TTCCEEECCSS
T ss_pred CCCCEEEECCCCCCCCCC----CCCCCCEEECCCCCCCCCCCC---HHHHHHHHHHHCCCCHHHHHC--CCCCCCCCCCC
T ss_conf 699899937999887889----878988898999979633620---332033266551432032102--21111133455
Q ss_pred CCCCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEE
Q ss_conf 78534053208878998834478789753935541687887898358976431023446523344701011688986889
Q 001860 575 NMQKLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPIEWVKVEGIDGERRNASLHELNHLSKLTSLE 654 (1003)
Q Consensus 575 ~i~~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~L~~L~ 654 (1003)
.+..+|. ++.+++|++|+++++ .+...+. ..+.+..+.+..+... ....+..++.++.+.
T Consensus 109 ~l~~lp~-~~~l~~L~~L~l~~~-~~~~~~~----~~~~l~~l~~~~~~~~--------------~~~~l~~l~~l~~L~ 168 (353)
T d1jl5a_ 109 QLEKLPE-LQNSSFLKIIDVDNN-SLKKLPD----LPPSLEFIAAGNNQLE--------------ELPELQNLPFLTAIY 168 (353)
T ss_dssp CCSSCCC-CTTCTTCCEEECCSS-CCSCCCC----CCTTCCEEECCSSCCS--------------SCCCCTTCTTCCEEE
T ss_pred CCCCCCC-HHHHCCCEEECCCCC-CCCCCCC----CCCCCCCHHHCCCCCC--------------CCCCCCCCCCCEECC
T ss_conf 4322210-011013123113565-1001322----3333210000122222--------------333200012220011
Q ss_pred EECCCCCC
Q ss_conf 61357887
Q 001860 655 ILIQDAKT 662 (1003)
Q Consensus 655 i~~~~~~~ 662 (1003)
+..+....
T Consensus 169 l~~n~~~~ 176 (353)
T d1jl5a_ 169 ADNNSLKK 176 (353)
T ss_dssp CCSSCCSS
T ss_pred CCCCCCCC
T ss_conf 12334432
No 8
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.78 E-value=6.7e-17 Score=118.46 Aligned_cols=146 Identities=18% Similarity=0.318 Sum_probs=76.5
Q ss_pred EEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCC-CCCCCCCCCCCEEECCCCCC
Q ss_conf 09991168998789967999920998448999988902231998622998369856468-82224896797997347788
Q 001860 476 RTISLRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLAL-PSSLGLLQSLQTLSLDDCQL 554 (1003)
Q Consensus 476 r~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l-p~~i~~L~~L~~L~L~~~~l 554 (1003)
+.++-++..++.+|.... +++++|++++|.+..++...|.+++.|++|+++++.+..+ |..|..+++|++|++++|.+
T Consensus 13 ~~~~C~~~~L~~lP~~l~-~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l 91 (305)
T d1xkua_ 13 RVVQCSDLGLEKVPKDLP-PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91 (305)
T ss_dssp TEEECTTSCCCSCCCSCC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEECCCCCCCCCCCCC-CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC
T ss_conf 999855999885198889-9979897849918986965760465652311234434452356652798557831568756
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCHH-HCCCCCCCEEECCCCCCCC-CCCHHHHHCCCCCCEEECCCCC
Q ss_conf 9952335766677776227678534053-2088789988344787897-5393554168788789835897
Q 001860 555 GDIAIIGDLKKLEILTLRGSNMQKLVEE-IGRLTQLRLLDLSNCSKLK-VIPANVISSLSRIEELYIGESP 623 (1003)
Q Consensus 555 ~~~~~l~~l~~L~~L~l~~~~i~~lp~~-~~~l~~L~~L~l~~c~~l~-~~p~~~l~~l~~L~~L~l~~~~ 623 (1003)
+.++. .....+..|++..+.+..++.. +.....+..+....+.... ......+..+++|+.+.+..+.
T Consensus 92 ~~l~~-~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~ 161 (305)
T d1xkua_ 92 KELPE-KMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 161 (305)
T ss_dssp SBCCS-SCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred CCCCC-CHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76764-00111323210246102344445401331100001233333467776422345656712034677
No 9
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.74 E-value=1.1e-17 Score=123.34 Aligned_cols=104 Identities=25% Similarity=0.340 Sum_probs=55.9
Q ss_pred CCEEEEECCCCCC---CCCCCCCCCCCCCEEECCC-CCCC-C-CCCCCCCCCCCEEECCCCCCCCCC-HHHCCCCCCCEE
Q ss_conf 6229983698564---6882224896797997347-7889-9-523357666777762276785340-532088789988
Q 001860 520 GLRVLDFTKMHLL---ALPSSLGLLQSLQTLSLDD-CQLG-D-IAIIGDLKKLEILTLRGSNMQKLV-EEIGRLTQLRLL 592 (1003)
Q Consensus 520 ~L~~L~L~~~~~~---~lp~~i~~L~~L~~L~L~~-~~l~-~-~~~l~~l~~L~~L~l~~~~i~~lp-~~~~~l~~L~~L 592 (1003)
+++.|+|+++.+. .+|..++++++|++|++++ +.+. . |..++++++|++|++++|.+..++ ..+..+.+|+++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCC
T ss_conf 98899898998888887984784675335202026543330024311454200110203564344332222201110011
Q ss_pred ECCCCCCCCCCCHHHHHCCCCCCEEECCCCCC
Q ss_conf 34478789753935541687887898358976
Q 001860 593 DLSNCSKLKVIPANVISSLSRIEELYIGESPI 624 (1003)
Q Consensus 593 ~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~ 624 (1003)
+++.+.....+|.. ++.++.|+.+++.++.+
T Consensus 131 ~l~~N~~~~~~p~~-l~~l~~L~~l~l~~n~l 161 (313)
T d1ogqa_ 131 DFSYNALSGTLPPS-ISSLPNLVGITFDGNRI 161 (313)
T ss_dssp ECCSSEEESCCCGG-GGGCTTCCEEECCSSCC
T ss_pred CCCCCCCCCCCCHH-HCCCCCCCEEECCCCCC
T ss_conf 11224555568512-20674000000235533
No 10
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.74 E-value=1.9e-17 Score=121.80 Aligned_cols=129 Identities=17% Similarity=0.266 Sum_probs=92.8
Q ss_pred CCCEEEECCCCCCC---CCCHHHHCCCCCCEEEEECC-CCCC-CCCCCCCCCCCCCEEECCCCCCCC--CCCCCCCCCCC
Q ss_conf 99209984489999---88902231998622998369-8564-688222489679799734778899--52335766677
Q 001860 495 PQLKYLTIDNDPSL---RIPDNLFSGMIGLRVLDFTK-MHLL-ALPSSLGLLQSLQTLSLDDCQLGD--IAIIGDLKKLE 567 (1003)
Q Consensus 495 ~~L~~L~l~~~~~~---~~~~~~~~~l~~L~~L~L~~-~~~~-~lp~~i~~L~~L~~L~L~~~~l~~--~~~l~~l~~L~ 567 (1003)
.+++.|+++++... .+|.. +.++++|++|++++ +.+. .+|.+|+++++|++|++++|.+.. +..+..+.+|+
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~-l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSS-LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGG-GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred EEEEEEECCCCCCCCCCCCCHH-HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHC
T ss_conf 7988998989988888879847-846753352020265433300243114542001102035643443322222011100
Q ss_pred EEECCCCCCC-CCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCC-CEEECCCCCCC
Q ss_conf 7762276785-3405320887899883447878975393554168788-78983589764
Q 001860 568 ILTLRGSNMQ-KLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRI-EELYIGESPIE 625 (1003)
Q Consensus 568 ~L~l~~~~i~-~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L-~~L~l~~~~~~ 625 (1003)
+++++.+.+. .+|..+..++.|++++++++.....+|.. +..+..+ +.+.+..+.+.
T Consensus 129 ~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~l~ 187 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEEE
T ss_pred CCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC
T ss_conf 1111224555568512206740000002355335620312-1443112323102246435
No 11
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.4e-16 Score=116.39 Aligned_cols=122 Identities=24% Similarity=0.345 Sum_probs=49.9
Q ss_pred EEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 09984489999889022319986229983698564688-22248967979973477889952335766677776227678
Q 001860 498 KYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALP-SSLGLLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLRGSNM 576 (1003)
Q Consensus 498 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp-~~i~~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~~~~i 576 (1003)
...+.+++....+|.++. +.+++|+|++|.+..+| ..|..+++|++|++++|.++.++.++.+++|++|++++|.+
T Consensus 13 ~~v~C~~~~L~~iP~~lp---~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~~l~~L~~L~Ls~N~l 89 (266)
T d1p9ag_ 13 LEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQL 89 (266)
T ss_dssp CEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCC
T ss_pred EEEECCCCCCCEECCCCC---CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 699806999886196757---68898988499289859778634565522135665444431111122321111122222
Q ss_pred CCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCC
Q ss_conf 53405320887899883447878975393554168788789835897
Q 001860 577 QKLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESP 623 (1003)
Q Consensus 577 ~~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~ 623 (1003)
+..+..+..+++|+.|++++ +....++...+..+.+++.|.+..+.
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~-~~~~~~~~~~~~~l~~l~~L~l~~n~ 135 (266)
T d1p9ag_ 90 QSLPLLGQTLPALTVLDVSF-NRLTSLPLGALRGLGELQELYLKGNE 135 (266)
T ss_dssp SSCCCCTTTCTTCCEEECCS-SCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred CCCCCCCCCCCCCCCCCCCC-CCCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf 11111212222222222222-31101100112222111122124342
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=4e-16 Score=113.59 Aligned_cols=193 Identities=25% Similarity=0.435 Sum_probs=82.1
Q ss_pred CCCEEEEECCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECC-CCCCCC-CCCCCCCCCCCEEE
Q ss_conf 7410999116899878996--7999920998448999988902231998622998369-856468-82224896797997
Q 001860 473 KVCRTISLRRCNISELPQE--FECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTK-MHLLAL-PSSLGLLQSLQTLS 548 (1003)
Q Consensus 473 ~~lr~L~l~~~~~~~l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~-~~~~~l-p~~i~~L~~L~~L~ 548 (1003)
..++.|++++|.++.+|.. ..+++|+.|+++++.+..++...+..+..++.+.... +.+..+ |..+.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEE
T ss_conf 99888977488179879778641421300001344543321112122222222222210223544620101010277875
Q ss_pred CCCCCCCC--CCCCCCCCCCCEEECCCCCCCCCCH-HHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCC
Q ss_conf 34778899--5233576667777622767853405-32088789988344787897539355416878878983589764
Q 001860 549 LDDCQLGD--IAIIGDLKKLEILTLRGSNMQKLVE-EIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPIE 625 (1003)
Q Consensus 549 L~~~~l~~--~~~l~~l~~L~~L~l~~~~i~~lp~-~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~~ 625 (1003)
+++|.+.. ...+....+|+.+++.++.++.+|. .+..+++|++|++++ +.+..++...+..+++|+.+.+..+.+.
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~-N~l~~l~~~~f~~l~~L~~l~l~~N~l~ 190 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG-NRISSVPERAFRGLHSLDRLLLHQNRVA 190 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS-SCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCC-CCCCCCCHHHHCCCCCCCHHHHHHCCCC
T ss_conf 688544320135332000121102001431445805740434050223141-7656625666546563413142114346
Q ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCC-CCCCCCCCEEEE
Q ss_conf 31023446523344701011688986889613578877843-212446648999
Q 001860 626 WVKVEGIDGERRNASLHELNHLSKLTSLEILIQDAKTLPRD-LSFFKMLRRYRI 678 (1003)
Q Consensus 626 ~~~~~~~~~~~~~~~l~~L~~l~~L~~L~i~~~~~~~~~~~-l~~l~~L~~L~l 678 (1003)
.. ....+..+++|+.|+++.|.+..++.. +..+++|+.+++
T Consensus 191 ~i------------~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l 232 (284)
T d1ozna_ 191 HV------------HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRL 232 (284)
T ss_dssp EE------------CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEEC
T ss_pred CC------------CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 62------------8167665320002333335221000002355465688981
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=8.2e-16 Score=111.68 Aligned_cols=172 Identities=20% Similarity=0.272 Sum_probs=101.0
Q ss_pred EEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCC-CCCCCCCCCCEEECCCC-CC
Q ss_conf 99911689987899679999209984489999889022319986229983698564688-22248967979973477-88
Q 001860 477 TISLRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALP-SSLGLLQSLQTLSLDDC-QL 554 (1003)
Q Consensus 477 ~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp-~~i~~L~~L~~L~L~~~-~l 554 (1003)
.+..++..++.+|.... +.++.|++++|.+..++...|.+++.|++|+++++.+..++ ..+..+..++.+....+ .+
T Consensus 15 ~v~c~~~~L~~iP~~ip-~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVGIP-AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp EEECCSSCCSSCCTTCC-TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EEECCCCCCCCCCCCCC-CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99847999894497889-99888977488179879778641421300001344543321112122222222222210223
Q ss_pred CC--CCCCCCCCCCCEEECCCCCCCCCC-HHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 99--523357666777762276785340-532088789988344787897539355416878878983589764310234
Q 001860 555 GD--IAIIGDLKKLEILTLRGSNMQKLV-EEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPIEWVKVEG 631 (1003)
Q Consensus 555 ~~--~~~l~~l~~L~~L~l~~~~i~~lp-~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~~~~~~~~ 631 (1003)
.. +..+.++++|++|++..+.+..++ ..+..+.+|+.+++++ +.++.++.+.+..+++|+.|++.++.+...
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~-N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l---- 168 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD-NALQALPDDTFRDLGNLTHLFLHGNRISSV---- 168 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS-SCCCCCCTTTTTTCTTCCEEECCSSCCCEE----
T ss_pred CCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCHHCCCCHHHHCC-CCCCCCCHHHHCCCCCHHHCCCCCCCCCCC----
T ss_conf 544620101010277875688544320135332000121102001-431445805740434050223141765662----
Q ss_pred CCCCCCCCCCHHHCCCCCCCEEEEECCCCCC
Q ss_conf 4652334470101168898688961357887
Q 001860 632 IDGERRNASLHELNHLSKLTSLEILIQDAKT 662 (1003)
Q Consensus 632 ~~~~~~~~~l~~L~~l~~L~~L~i~~~~~~~ 662 (1003)
....+..+++|+.+.+..+....
T Consensus 169 --------~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 169 --------PERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp --------CTTTTTTCTTCCEEECCSSCCCE
T ss_pred --------CHHHHCCCCCCCHHHHHHCCCCC
T ss_conf --------56665465634131421143466
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=2.5e-15 Score=108.72 Aligned_cols=98 Identities=18% Similarity=0.241 Sum_probs=32.0
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 41099911689987899679999209984489999889022319986229983698564688222489679799734778
Q 001860 474 VCRTISLRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQ 553 (1003)
Q Consensus 474 ~lr~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~ 553 (1003)
.++.+++.++.++.++....+++|+.|+++++.+..+.. +..++.+++++++++.++.++ .+..+++|+++.++++.
T Consensus 42 ~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l~l~~~~ 118 (227)
T d1h6ua2 42 GITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLTSTQ 118 (227)
T ss_dssp TCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECTTSC
T ss_pred CCCEEECCCCCCCCCHHHHCCCCCCEEECCCCEEECCCC--CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC
T ss_conf 868997779999766457448888376357853202543--112334320121112222222-22222222122122244
Q ss_pred CCCCCCCCCCCCCCEEECCCC
Q ss_conf 899523357666777762276
Q 001860 554 LGDIAIIGDLKKLEILTLRGS 574 (1003)
Q Consensus 554 l~~~~~l~~l~~L~~L~l~~~ 574 (1003)
......+...+.+..+.+..+
T Consensus 119 ~~~~~~~~~~~~~~~l~~~~~ 139 (227)
T d1h6ua2 119 ITDVTPLAGLSNLQVLYLDLN 139 (227)
T ss_dssp CCCCGGGTTCTTCCEEECCSS
T ss_pred CCCCCHHCCCCCHHHHHCHHH
T ss_conf 331100000230122200000
No 15
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=1.1e-15 Score=110.92 Aligned_cols=165 Identities=24% Similarity=0.351 Sum_probs=103.2
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 67410999116899878996799992099844899998890223199862299836985646882224896797997347
Q 001860 472 LKVCRTISLRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDD 551 (1003)
Q Consensus 472 ~~~lr~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~ 551 (1003)
+..++++.++++.+..++....+++|+.|+++++.+..++. +..+++|++|++++|.++.+| .+..+++|+.|++.+
T Consensus 45 L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~ 121 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLEH 121 (210)
T ss_dssp HHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECTT
T ss_pred HCCCCEEECCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCC
T ss_conf 54845897827988874447648998987698960258601--135862120143333321222-121222111223456
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 78899523357666777762276785340532088789988344787897539355416878878983589764310234
Q 001860 552 CQLGDIAIIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPIEWVKVEG 631 (1003)
Q Consensus 552 ~~l~~~~~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~~~~~~~~ 631 (1003)
|.+..+..+..+++++.++++++.++..+ .+..+++|+++++++ +.+..++. +..+++|++|++++|.+..
T Consensus 122 ~~~~~~~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~-n~l~~i~~--l~~l~~L~~L~Ls~N~i~~----- 192 (210)
T d1h6ta2 122 NGISDINGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLED-NQISDIVP--LAGLTKLQNLYLSKNHISD----- 192 (210)
T ss_dssp SCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCS-SCCCCCGG--GTTCTTCCEEECCSSCCCB-----
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCC-CCCCCCCC--CCCCCCCCEEECCCCCCCC-----
T ss_conf 53221122011111222112223334543-100013321001346-43025645--3678989999897998998-----
Q ss_pred CCCCCCCCCCHHHCCCCCCCEEEEEC
Q ss_conf 46523344701011688986889613
Q 001860 632 IDGERRNASLHELNHLSKLTSLEILI 657 (1003)
Q Consensus 632 ~~~~~~~~~l~~L~~l~~L~~L~i~~ 657 (1003)
+..+..+++|+.|++++
T Consensus 193 ---------l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 193 ---------LRALAGLKNLDVLELFS 209 (210)
T ss_dssp ---------CGGGTTCTTCSEEEEEE
T ss_pred ---------CHHHCCCCCCCEEECCC
T ss_conf ---------72116999989997118
No 16
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=2.1e-15 Score=109.08 Aligned_cols=147 Identities=20% Similarity=0.299 Sum_probs=85.2
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 67410999116899878996799992099844899998890223199862299836985646882224896797997347
Q 001860 472 LKVCRTISLRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDD 551 (1003)
Q Consensus 472 ~~~lr~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~ 551 (1003)
+..++.|+++++.+..+.....+++|++|++++|.+..++. +.+++.|++|+++++.+..++. +..+++|++|++++
T Consensus 39 l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~~-l~~l~~L~~L~l~~ 115 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFN 115 (199)
T ss_dssp HTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEECCS
T ss_pred HCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
T ss_conf 46878998999999775202137886757545655667640--1677522311112222222211-11122322211122
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCC
Q ss_conf 78899523357666777762276785340532088789988344787897539355416878878983589764
Q 001860 552 CQLGDIAIIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPIE 625 (1003)
Q Consensus 552 ~~l~~~~~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~~ 625 (1003)
|.......+..+++|+.|+++++.+..++ .+..+++|+.|++.+ +.+..++. ++.+++|+.|++++|.+.
T Consensus 116 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~-n~l~~l~~--l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 116 NQITDIDPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSS-NQVTDLKP--LANLTTLERLDISSNKVS 185 (199)
T ss_dssp SCCCCCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCS-SCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCC-CCCCCCCC--CCCCCCCCEEECCCCCCC
T ss_conf 22223210001223677643111100234-333211111122345-55567701--167998999978799799
No 17
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.4e-15 Score=110.32 Aligned_cols=165 Identities=24% Similarity=0.299 Sum_probs=115.5
Q ss_pred CCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 99992099844899998890223199862299836985646882224896797997347788995233576667777622
Q 001860 493 ECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLR 572 (1003)
Q Consensus 493 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~ 572 (1003)
.+..++.|++.++.+..++. +..+++|++|+++++.+..++. ++.+++|++|++++|.++.++.+..+++|+.|++.
T Consensus 44 ~L~~L~~L~l~~~~i~~l~~--l~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLE 120 (210)
T ss_dssp HHHTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECT
T ss_pred HHCCCCEEECCCCCCCCCHH--HHHCCCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95484589782798887444--7648998987698960258601-13586212014333332122212122211122345
Q ss_pred CCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCE
Q ss_conf 76785340532088789988344787897539355416878878983589764310234465233447010116889868
Q 001860 573 GSNMQKLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPIEWVKVEGIDGERRNASLHELNHLSKLTS 652 (1003)
Q Consensus 573 ~~~i~~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~L~~ 652 (1003)
++.+..++ .+..+++++.++++. +.+...+. +..+++|+.+++.++.+.. +..+..+++|+.
T Consensus 121 ~~~~~~~~-~l~~l~~l~~l~~~~-n~l~~~~~--~~~l~~L~~l~l~~n~l~~--------------i~~l~~l~~L~~ 182 (210)
T d1h6ta2 121 HNGISDIN-GLVHLPQLESLYLGN-NKITDITV--LSRLTKLDTLSLEDNQISD--------------IVPLAGLTKLQN 182 (210)
T ss_dssp TSCCCCCG-GGGGCTTCCEEECCS-SCCCCCGG--GGGCTTCSEEECCSSCCCC--------------CGGGTTCTTCCE
T ss_pred CCCCCCCC-CCCCCCCCCCCCCCC-CCCCCCCC--CCCCCCCCCCCCCCCCCCC--------------CCCCCCCCCCCE
T ss_conf 65322112-201111122211222-33345431--0001332100134643025--------------645367898999
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 896135788778432124466489999
Q 001860 653 LEILIQDAKTLPRDLSFFKMLRRYRIS 679 (1003)
Q Consensus 653 L~i~~~~~~~~~~~l~~l~~L~~L~l~ 679 (1003)
|++++|.+..++ .+..+++|+.|+++
T Consensus 183 L~Ls~N~i~~l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 183 LYLSKNHISDLR-ALAGLKNLDVLELF 208 (210)
T ss_dssp EECCSSCCCBCG-GGTTCTTCSEEEEE
T ss_pred EECCCCCCCCCH-HHCCCCCCCEEECC
T ss_conf 989799899872-11699998999711
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.5e-15 Score=110.13 Aligned_cols=175 Identities=22% Similarity=0.321 Sum_probs=119.6
Q ss_pred ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 11689987899679999209984489999889022319986229983698564688222489679799734778899523
Q 001860 480 LRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIAI 559 (1003)
Q Consensus 480 l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~~ 559 (1003)
+..+.++.......+++++.|+++++.+..+.. +..+++|++|++++|.+..++. ++.+++|++|++++|.+...+.
T Consensus 25 l~~~~~~~~~~~~~l~~l~~L~l~~~~i~~l~~--l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~~~~~ 101 (199)
T d2omxa2 25 LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP 101 (199)
T ss_dssp TTCSSTTSEECHHHHTTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred HCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 677877885598794687899899999977520--2137886757545655667640-1677522311112222222211
Q ss_pred CCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 35766677776227678534053208878998834478789753935541687887898358976431023446523344
Q 001860 560 IGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPIEWVKVEGIDGERRNA 639 (1003)
Q Consensus 560 l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 639 (1003)
+..+++|+.|+++++.....+ .+..+++|+.|++++ +.+..++. +..+++|+.|++.+|.+..
T Consensus 102 l~~l~~L~~L~l~~~~~~~~~-~~~~l~~L~~L~l~~-n~l~~~~~--l~~~~~L~~L~l~~n~l~~------------- 164 (199)
T d2omxa2 102 LANLTNLTGLTLFNNQITDID-PLKNLTNLNRLELSS-NTISDISA--LSGLTSLQQLNFSSNQVTD------------- 164 (199)
T ss_dssp GTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCS-SCCCCCGG--GTTCTTCSEEECCSSCCCC-------------
T ss_pred CCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHH-HHHCCCCC--CCCCCCCCCCCCCCCCCCC-------------
T ss_conf 111223222111222222321-000122367764311-11002343--3321111112234555567-------------
Q ss_pred CCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEE
Q ss_conf 7010116889868896135788778432124466489
Q 001860 640 SLHELNHLSKLTSLEILIQDAKTLPRDLSFFKMLRRY 676 (1003)
Q Consensus 640 ~l~~L~~l~~L~~L~i~~~~~~~~~~~l~~l~~L~~L 676 (1003)
+..+..+++|+.|++++|.+..++ .+..+++|+.|
T Consensus 165 -l~~l~~l~~L~~L~ls~N~i~~i~-~l~~L~~L~~L 199 (199)
T d2omxa2 165 -LKPLANLTTLERLDISSNKVSDIS-VLAKLTNLESL 199 (199)
T ss_dssp -CGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCSEE
T ss_pred -CCCCCCCCCCCEEECCCCCCCCCC-CCCCCCCCCCC
T ss_conf -701167998999978799799881-01278998949
No 19
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.60 E-value=1.5e-13 Score=97.66 Aligned_cols=76 Identities=26% Similarity=0.419 Sum_probs=26.3
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCC
Q ss_conf 862299836985646882224896797997347788995233576667777622767853405320887899883447
Q 001860 519 IGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDLSN 596 (1003)
Q Consensus 519 ~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l~~ 596 (1003)
..|+.|++.++.+..++ .+..+++|++|++++|.+..+..+..+++|+++++.++.++.++ .+..+++|+.+.++.
T Consensus 41 ~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l~l~~ 116 (227)
T d1h6ua2 41 DGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLTS 116 (227)
T ss_dssp HTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECTT
T ss_pred CCCCEEECCCCCCCCCH-HHHCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCC
T ss_conf 88689977799997664-57448888376357853202543112334320121112222222-222222221221222
No 20
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=6.8e-16 Score=112.18 Aligned_cols=101 Identities=21% Similarity=0.300 Sum_probs=46.1
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC--C-CCCCCCCCCCEEECCCCCCC-CCCHHHCCCCCCCEEECCCC
Q ss_conf 29983698564688222489679799734778899--5-23357666777762276785-34053208878998834478
Q 001860 522 RVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGD--I-AIIGDLKKLEILTLRGSNMQ-KLVEEIGRLTQLRLLDLSNC 597 (1003)
Q Consensus 522 ~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~--~-~~l~~l~~L~~L~l~~~~i~-~lp~~~~~l~~L~~L~l~~c 597 (1003)
..+.+.................|++|++++|.+.. + ..+..+++|++|+++++.+. ..+..+.++++|++|++++|
T Consensus 26 ~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c 105 (284)
T d2astb2 26 IAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 105 (284)
T ss_dssp SEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred EEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
T ss_conf 27465233345522442567878878898984577799999974877651452346798678999851899757151001
Q ss_pred CCCCCCC-HHHHHCCCCCCEEECCCC
Q ss_conf 7897539-355416878878983589
Q 001860 598 SKLKVIP-ANVISSLSRIEELYIGES 622 (1003)
Q Consensus 598 ~~l~~~p-~~~l~~l~~L~~L~l~~~ 622 (1003)
+.++... ..+...+++|++|++++|
T Consensus 106 ~~itd~~l~~l~~~~~~L~~L~ls~c 131 (284)
T d2astb2 106 SGFSEFALQTLLSSCSRLDELNLSWC 131 (284)
T ss_dssp BSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCC
T ss_conf 34123554036578874356522453
No 21
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.4e-15 Score=110.28 Aligned_cols=60 Identities=15% Similarity=0.177 Sum_probs=24.0
Q ss_pred CCCCCCEEECCCCCCC--CCCHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCC
Q ss_conf 7666777762276785--340532088789988344787897539355416878878983589
Q 001860 562 DLKKLEILTLRGSNMQ--KLVEEIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGES 622 (1003)
Q Consensus 562 ~l~~L~~L~l~~~~i~--~lp~~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~ 622 (1003)
...+|++|+++++.+. .++..+..+++|++|++++|......+.. ++.+++|+.|++++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~-l~~~~~L~~L~Ls~c 105 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNT-LAKNSNLVRLNLSGC 105 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHH-HTTCTTCSEEECTTC
T ss_pred CCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH-HHCCCCCCCCCCCCC
T ss_conf 67878878898984577799999974877651452346798678999-851899757151001
No 22
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.3e-12 Score=89.25 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=18.8
Q ss_pred EEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCC
Q ss_conf 999116899878996799992099844899998890223199862299836985
Q 001860 477 TISLRRCNISELPQEFECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMH 530 (1003)
Q Consensus 477 ~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~ 530 (1003)
.+..++..++.+|.... +++++|+++++.+..++...|.++++|++|+++++.
T Consensus 12 ~i~c~~~~l~~iP~~l~-~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~ 64 (242)
T d1xwdc1 12 VFLCQESKVTEIPSDLP-RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQND 64 (242)
T ss_dssp EEEEESCSCSSCCSCSC-SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCT
T ss_pred EEEEECCCCCCCCCCCC-CCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCC
T ss_conf 99981899887688889-988999876991896496686146432321102211
No 23
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=6.3e-13 Score=93.75 Aligned_cols=100 Identities=16% Similarity=0.258 Sum_probs=44.2
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC-C-CCCCCCCCCCEEECCCCCCCCC-C-HHHCCCCCCCEEECCCC
Q ss_conf 29983698564688222489679799734778899-5-2335766677776227678534-0-53208878998834478
Q 001860 522 RVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGD-I-AIIGDLKKLEILTLRGSNMQKL-V-EEIGRLTQLRLLDLSNC 597 (1003)
Q Consensus 522 ~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~-~-~~l~~l~~L~~L~l~~~~i~~l-p-~~~~~l~~L~~L~l~~c 597 (1003)
++++.++..++.+|..+. .++++|++++|.+.. + ..+.++++|++|+++++.+... + ..+..++.++++.+..+
T Consensus 11 ~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CEEEEECCCCCCCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 999981899887688889--988999876991896496686146432321102211242010011222222222111112
Q ss_pred CCCCCCCHHHHHCCCCCCEEECCCCC
Q ss_conf 78975393554168788789835897
Q 001860 598 SKLKVIPANVISSLSRIEELYIGESP 623 (1003)
Q Consensus 598 ~~l~~~p~~~l~~l~~L~~L~l~~~~ 623 (1003)
+.+...+.+.+..+++|+.+++..+.
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~ 114 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTG 114 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 34322222212222222222342111
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=9.4e-13 Score=92.64 Aligned_cols=122 Identities=19% Similarity=0.186 Sum_probs=52.0
Q ss_pred CCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC-CCC-CCCCCCCCEEEC
Q ss_conf 999209984489999889022319986229983698564688222489679799734778899-523-357666777762
Q 001860 494 CPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGD-IAI-IGDLKKLEILTL 571 (1003)
Q Consensus 494 ~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~-~~~-l~~l~~L~~L~l 571 (1003)
+.++|.|+++++.+..++ +.+..+++|++|++++|.+..++ .+..+++|++|++++|.+.. ++. +..+++|++|++
T Consensus 17 ~~~lr~L~L~~n~I~~i~-~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 17 AVRDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp TTSCEEEECTTSCCCSCC-CGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCC-CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 574848978899788657-62004145998989799787647-7445761306431021345777632233453443420
Q ss_pred CCCCCCCCCH--HHCCCCCCCEEECCCCCCCCCCCH---HHHHCCCCCCEEE
Q ss_conf 2767853405--320887899883447878975393---5541687887898
Q 001860 572 RGSNMQKLVE--EIGRLTQLRLLDLSNCSKLKVIPA---NVISSLSRIEELY 618 (1003)
Q Consensus 572 ~~~~i~~lp~--~~~~l~~L~~L~l~~c~~l~~~p~---~~l~~l~~L~~L~ 618 (1003)
++|.++.++. .+..+++|++|++++| .+...|. .++..+|+|+.|+
T Consensus 95 ~~N~i~~~~~l~~l~~l~~L~~L~l~~N-~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 95 TNNSLVELGDLDPLASLKSLTYLCILRN-PVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CSCCCCCGGGGGGGGGCTTCCEEECCSS-GGGGSTTHHHHHHHHCTTCSEET
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHCCCC-CCCCCCCHHHHHHHHCCCCCEEC
T ss_conf 3000166542110013653206640799-63456106999998789958337
No 25
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=4e-13 Score=94.93 Aligned_cols=110 Identities=18% Similarity=0.299 Sum_probs=71.8
Q ss_pred HCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHH-CCCCCCCEEE
Q ss_conf 319986229983698564688222489679799734778899523357666777762276785340532-0887899883
Q 001860 515 FSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLRGSNMQKLVEEI-GRLTQLRLLD 593 (1003)
Q Consensus 515 ~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~~~~i~~lp~~~-~~l~~L~~L~ 593 (1003)
|.+...+|.|+++++.+..++..+..+.+|++|++++|.+..++.+..+++|++|++++|.++.+|..+ ..+++|++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 16857484897889978865762004145998989799787647744576130643102134577763223345344342
Q ss_pred CCCCCCCCCCCH-HHHHCCCCCCEEECCCCCCC
Q ss_conf 447878975393-55416878878983589764
Q 001860 594 LSNCSKLKVIPA-NVISSLSRIEELYIGESPIE 625 (1003)
Q Consensus 594 l~~c~~l~~~p~-~~l~~l~~L~~L~l~~~~~~ 625 (1003)
+++ +.+..++. ..+..+++|+++++.+|++.
T Consensus 94 L~~-N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 94 LTN-NSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CCS-CCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ECC-CCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 030-00166542110013653206640799634
No 26
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.39 E-value=2.7e-12 Score=89.76 Aligned_cols=96 Identities=23% Similarity=0.346 Sum_probs=38.7
Q ss_pred EEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 99844899998890223199862299836985646882224896797997347788995233576667777622767853
Q 001860 499 YLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLRGSNMQK 578 (1003)
Q Consensus 499 ~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~~~~i~~ 578 (1003)
+|+++++.+..++. +..+..|++|++++|.+..+|..++.+++|++|++++|.++.++.++.+++|++|++++|.++.
T Consensus 2 ~L~Ls~n~l~~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~~~~l~~L~~L~l~~N~i~~ 79 (124)
T d1dcea3 2 VLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQ 79 (124)
T ss_dssp EEECTTSCCSSCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCCS
T ss_pred EEECCCCCCCCCCC--CCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 89868998988710--1058988989797871686521565543135453243211235741233555768888986588
Q ss_pred CC--HHHCCCCCCCEEECCC
Q ss_conf 40--5320887899883447
Q 001860 579 LV--EEIGRLTQLRLLDLSN 596 (1003)
Q Consensus 579 lp--~~~~~l~~L~~L~l~~ 596 (1003)
+| ..+..+++|++|++++
T Consensus 80 ~~~~~~l~~~~~L~~L~l~~ 99 (124)
T d1dcea3 80 SAAIQPLVSCPRLVLLNLQG 99 (124)
T ss_dssp SSTTGGGGGCTTCCEEECTT
T ss_pred CCCCHHHCCCCCCCEEECCC
T ss_conf 88825653799999998979
No 27
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.36 E-value=6.7e-12 Score=87.33 Aligned_cols=124 Identities=18% Similarity=0.334 Sum_probs=56.7
Q ss_pred EEEECCCCCCCCCCCCCCCCCEEEECCCCCCCC-CCHHHHCCCCCCEEEEECCCCCCCCC-CCCCCCCCCCEEECCCCCC
Q ss_conf 999116899878996799992099844899998-89022319986229983698564688-2224896797997347788
Q 001860 477 TISLRRCNISELPQEFECPQLKYLTIDNDPSLR-IPDNLFSGMIGLRVLDFTKMHLLALP-SSLGLLQSLQTLSLDDCQL 554 (1003)
Q Consensus 477 ~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~l~~L~~L~L~~~~~~~lp-~~i~~L~~L~~L~L~~~~l 554 (1003)
.++.+++.++.+|.... ++++.|++++|.+.. ++...|.++++|+.|+++++.+..++ ..+..+++|++|++++|
T Consensus 12 ~v~Cs~~~L~~iP~~lp-~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N-- 88 (192)
T d1w8aa_ 12 TVDCTGRGLKEIPRDIP-LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN-- 88 (192)
T ss_dssp EEECTTSCCSSCCSCCC-TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC--
T ss_pred EEEEECCCCCCCCCCCC-CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCC--
T ss_conf 99970899670298989-787889848987755302002578762721301363221212122211222210100355--
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCH-HHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCC
Q ss_conf 995233576667777622767853405-3208878998834478789753935541687887898358976
Q 001860 555 GDIAIIGDLKKLEILTLRGSNMQKLVE-EIGRLTQLRLLDLSNCSKLKVIPANVISSLSRIEELYIGESPI 624 (1003)
Q Consensus 555 ~~~~~l~~l~~L~~L~l~~~~i~~lp~-~~~~l~~L~~L~l~~c~~l~~~p~~~l~~l~~L~~L~l~~~~~ 624 (1003)
.++.+|. .+.++++|++|++++ +.+..++++.+..+++|+++++.++.+
T Consensus 89 --------------------~l~~l~~~~F~~l~~L~~L~L~~-N~l~~i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 89 --------------------KIKEISNKMFLGLHQLKTLNLYD-NQISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp --------------------CCCEECSSSSTTCTTCCEEECCS-SCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred --------------------CCCCCCHHHHHCCCCCCCCCCCC-CCCCCCCHHHHCCCCCCCCCCCCCCCC
T ss_conf --------------------34434979980797465524577-453535977856875334200036443
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.35 E-value=1.1e-11 Score=86.11 Aligned_cols=126 Identities=23% Similarity=0.336 Sum_probs=95.5
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC---CCCCCCCCCCCEEECCCCCCCCCC-HHHCCCCCCCEEECCC
Q ss_conf 229983698564688222489679799734778899---523357666777762276785340-5320887899883447
Q 001860 521 LRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGD---IAIIGDLKKLEILTLRGSNMQKLV-EEIGRLTQLRLLDLSN 596 (1003)
Q Consensus 521 L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~---~~~l~~l~~L~~L~l~~~~i~~lp-~~~~~l~~L~~L~l~~ 596 (1003)
.+.++.+++.++.+|..+. .++++|+|++|.++. ...+..+++|+.|+++++.+..++ ..+..+++|++|++++
T Consensus 10 ~~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEEECCCCCCCCCCCC--CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 9999970899670298989--78788984898775530200257876272130136322121212221122221010035
Q ss_pred CCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
Q ss_conf 87897539355416878878983589764310234465233447010116889868896135788
Q 001860 597 CSKLKVIPANVISSLSRIEELYIGESPIEWVKVEGIDGERRNASLHELNHLSKLTSLEILIQDAK 661 (1003)
Q Consensus 597 c~~l~~~p~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~L~~L~i~~~~~~ 661 (1003)
+.+..++++.|..+++|++|++++|.+... ....+..+++|+.|++.+|...
T Consensus 88 -N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i------------~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 88 -NKIKEISNKMFLGLHQLKTLNLYDNQISCV------------MPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp -CCCCEECSSSSTTCTTCCEEECCSSCCCEE------------CTTSSTTCTTCCEEECTTCCBC
T ss_pred -CCCCCCCHHHHHCCCCCCCCCCCCCCCCCC------------CHHHHCCCCCCCCCCCCCCCCC
T ss_conf -534434979980797465524577453535------------9778568753342000364434
No 29
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.30 E-value=2.1e-11 Score=84.24 Aligned_cols=101 Identities=24% Similarity=0.307 Sum_probs=71.2
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCCCCCC
Q ss_conf 29983698564688222489679799734778899-52335766677776227678534053208878998834478789
Q 001860 522 RVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGD-IAIIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDLSNCSKL 600 (1003)
Q Consensus 522 ~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~-~~~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l~~c~~l 600 (1003)
|+|+++++.++.++. ++.+.+|++|++++|.++. |+.++.+++|++|++++|.++.+| .+..+++|++|++++ +.+
T Consensus 1 R~L~Ls~n~l~~l~~-l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~-N~i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCN-NRL 77 (124)
T ss_dssp SEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCS-SCC
T ss_pred CEEECCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCCEEECCC-CCC
T ss_conf 989868998988710-10589889897978716865215655431354532432112357-412335557688889-865
Q ss_pred CCCCH-HHHHCCCCCCEEECCCCCCC
Q ss_conf 75393-55416878878983589764
Q 001860 601 KVIPA-NVISSLSRIEELYIGESPIE 625 (1003)
Q Consensus 601 ~~~p~-~~l~~l~~L~~L~l~~~~~~ 625 (1003)
..++. ..+..+++|+.+++++|.+.
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCCHHHCCCCCCCEEECCCCCCC
T ss_conf 88888256537999999989799688
No 30
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=3.4e-13 Score=95.39 Aligned_cols=57 Identities=11% Similarity=-0.014 Sum_probs=25.0
Q ss_pred CCCCCCEEEEECCCCCEE-----ECCC-CCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCEE
Q ss_conf 457866488841898508-----7289-88888744687255544232355342000102102566301
Q 001860 926 KFPSLERLVVEDCPNMKI-----FSGG-ELSTPKLHKVQLNYIDEKRWAWDRDLNTTIRYLYLTTKRVQ 988 (1003)
Q Consensus 926 ~l~~L~~L~i~~C~~l~~-----~~~~-~~~~~~L~~L~l~~C~~l~~l~~~~~~~~L~~L~l~~~~l~ 988 (1003)
.+++|++|+++++ .++. +... ..+...|+.|++.+ ..+.. .....+..+....+.++
T Consensus 395 ~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~l~l~~-~~~~~----~~~~~l~~l~~~~~~l~ 457 (460)
T d1z7xw1 395 ANHSLRELDLSNN-CLGDAGILQLVESVRQPGCLLEQLVLYD-IYWSE----EMEDRLQALEKDKPSLR 457 (460)
T ss_dssp HCCCCCEEECCSS-SCCHHHHHHHHHHHTSTTCCCCEEECTT-CCCCH----HHHHHHHHHHHHCTTSE
T ss_pred CCCCCCEEECCCC-CCCHHHHHHHHHHHHHCCCCCCEEECCC-CCCCH----HHHHHHHHHHHHCCCCE
T ss_conf 2998898989999-6987999999999974788667898989-87898----99999999997599989
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.17 E-value=2.3e-13 Score=96.48 Aligned_cols=105 Identities=24% Similarity=0.355 Sum_probs=42.4
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEEC
Q ss_conf 1998622998369856468822248967979973477889952-335766677776227678534053208878998834
Q 001860 516 SGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIA-IIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRLLDL 594 (1003)
Q Consensus 516 ~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~-~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~L~l 594 (1003)
..+++|+.|+++++.+..++ .+..+++|++|++++|.+..++ ....+++|++|++++|.++.++ .+..+++|++|++
T Consensus 45 ~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~L 122 (198)
T d1m9la_ 45 STLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYM 122 (198)
T ss_dssp HHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHHHSSEEEE
T ss_pred HCCCCCCEEECCCCCCCCCC-CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
T ss_conf 62604615199446899864-424782535734135343210000332212333333332222222-2222223411123
Q ss_pred CCCCCCCCCCH-HHHHCCCCCCEEECCCCC
Q ss_conf 47878975393-554168788789835897
Q 001860 595 SNCSKLKVIPA-NVISSLSRIEELYIGESP 623 (1003)
Q Consensus 595 ~~c~~l~~~p~-~~l~~l~~L~~L~l~~~~ 623 (1003)
++ +.+..++. ..+..+++|+.|++.+|+
T Consensus 123 ~~-N~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 123 SN-NKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp SE-EECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred CC-CHHCCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 41-021255422123677763023427984
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.14 E-value=4.2e-13 Score=94.83 Aligned_cols=103 Identities=19% Similarity=0.282 Sum_probs=61.0
Q ss_pred CCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 99992099844899998890223199862299836985646882224896797997347788995233576667777622
Q 001860 493 ECPQLKYLTIDNDPSLRIPDNLFSGMIGLRVLDFTKMHLLALPSSLGLLQSLQTLSLDDCQLGDIAIIGDLKKLEILTLR 572 (1003)
Q Consensus 493 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~l~~~~~l~~l~~L~~L~l~ 572 (1003)
.+++|+.|+++++.+..++. +.++++|++|++++|.+..+|..+..+++|++|++++|.++.++.+..+++|++|+++
T Consensus 46 ~L~~L~~L~Ls~n~I~~i~~--l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~~~~~l~~L~~L~L~ 123 (198)
T d1m9la_ 46 TLKACKHLALSTNNIEKISS--LSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMS 123 (198)
T ss_dssp HTTTCCEEECSEEEESCCCC--HHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHHHHHHHHHSSEEEES
T ss_pred CCCCCCEEECCCCCCCCCCC--CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 26046151994468998644--2478253573413534321000033221233333333222222222222234111234
Q ss_pred CCCCCCCC--HHHCCCCCCCEEECCCC
Q ss_conf 76785340--53208878998834478
Q 001860 573 GSNMQKLV--EEIGRLTQLRLLDLSNC 597 (1003)
Q Consensus 573 ~~~i~~lp--~~~~~l~~L~~L~l~~c 597 (1003)
+|.++.++ ..+..+++|++|+++++
T Consensus 124 ~N~i~~~~~~~~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 124 NNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp EEECCCHHHHHHHTTTTTCSEEEECSS
T ss_pred CCHHCCCCCCCCCCCCCCCCEEECCCC
T ss_conf 102125542212367776302342798
No 33
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=2.3e-12 Score=90.22 Aligned_cols=14 Identities=14% Similarity=0.207 Sum_probs=6.7
Q ss_pred CCCCCEEEECCCCCC
Q ss_conf 887446872555442
Q 001860 951 TPKLHKVQLNYIDEK 965 (1003)
Q Consensus 951 ~~~L~~L~l~~C~~l 965 (1003)
.++|++|++++ +++
T Consensus 396 ~~~L~~L~Ls~-N~i 409 (460)
T d1z7xw1 396 NHSLRELDLSN-NCL 409 (460)
T ss_dssp CCCCCEEECCS-SSC
T ss_pred CCCCCEEECCC-CCC
T ss_conf 99889898999-969
No 34
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.92 E-value=5.5e-09 Score=69.21 Aligned_cols=166 Identities=15% Similarity=0.190 Sum_probs=89.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC-----CCCHHHHHH
Q ss_conf 798211135289999999997079932999991798539999999999844426765499999748-----607999999
Q 001860 147 TQGFVHFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSR-----TPQIKKIQE 221 (1003)
Q Consensus 147 ~~~~~~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~-----~~~~~~i~~ 221 (1003)
....+.|+||+++++++.+. ..+++.|+|.+|+|||+|++++.+.... ...|+.+.. ......+..
T Consensus 8 ~~~~~~f~GR~~el~~l~~~----~~~~i~i~G~~G~GKTsLl~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~ 78 (283)
T d2fnaa2 8 KDNRKDFFDREKEIEKLKGL----RAPITLVLGLRRTGKSSIIKIGINELNL-----PYIYLDLRKFEERNYISYKDFLL 78 (283)
T ss_dssp CCSGGGSCCCHHHHHHHHHT----CSSEEEEEESTTSSHHHHHHHHHHHHTC-----CEEEEEGGGGTTCSCCCHHHHHH
T ss_pred CCCHHHCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCC-----CEEEEEECCCCCCCCCCHHHHHH
T ss_conf 99722078969999999840----5987999869998299999999997799-----86999721453333243999999
Q ss_pred HHHHHHC--------------CC---------CH---HHHHHHHHHHHHHHH--HCCCEEEEEEECCCCCCC-----C-C
Q ss_conf 9999919--------------97---------21---234489999999998--239849999919998326-----0-1
Q 001860 222 EIAEKMG--------------LR---------LV---EEIETVRAGRLYERL--KVEKKILIILDDIWGSLD-----L-E 267 (1003)
Q Consensus 222 ~i~~~l~--------------~~---------~~---~~~~~~~~~~l~~~l--~~~kr~LiVlDdv~~~~~-----~-~ 267 (1003)
.+..... .. .. ..........+.+.+ ..+++.++|+|++..... + .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~~~~~~ 158 (283)
T d2fnaa2 79 ELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNLLP 158 (283)
T ss_dssp HHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHH
T ss_conf 99997544555557777777753033434432223410013458999999987631555545664055413332699999
Q ss_pred C----------CCC------------CCCC---C----C-----------CHHHHHHHHHHHHCC-CCCCHHHHHHHHHH
Q ss_conf 1----------024------------4689---9----9-----------948999999997299-99990359999999
Q 001860 268 A----------IGI------------PLAD---D----N-----------SGREAWSLFTKTTGD-CIENDELRSVAKDI 306 (1003)
Q Consensus 268 ~----------~~~------------~~~~---~----~-----------~~~~~~~lf~~~~~~-~~~~~~l~~~~~~I 306 (1003)
. +.. .+.. . + ..+++.+++.+.... ....+. ..+|
T Consensus 159 ~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~~~~----~~~i 234 (283)
T d2fnaa2 159 ALAYAYDNLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDFKD----YEVV 234 (283)
T ss_dssp HHHHHHHHCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCCCCC----HHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHH----HHHH
T ss_conf 999998753113442035650678999975421000103410588628878899999999665456999999----9999
Q ss_pred HHHCCCCCHHHHHHHHHHC
Q ss_conf 9990996137999999970
Q 001860 307 VKECAGLPIAIVPVARALR 325 (1003)
Q Consensus 307 ~~~c~glPLai~~~g~~L~ 325 (1003)
.+.++|.|..+..+|..+.
T Consensus 235 ~~~~~G~P~~L~~~~~~~~ 253 (283)
T d2fnaa2 235 YEKIGGIPGWLTYFGFIYL 253 (283)
T ss_dssp HHHHCSCHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHH
T ss_conf 9996997999999999998
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.82 E-value=2.8e-08 Score=64.79 Aligned_cols=100 Identities=21% Similarity=0.233 Sum_probs=45.3
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCEEECCCCC-CCC--CCCCCCCCCCCEEECCCCCCCCCC-HHHCCCCCCCEEECCCCC
Q ss_conf 9983698564688222489679799734778-899--523357666777762276785340-532088789988344787
Q 001860 523 VLDFTKMHLLALPSSLGLLQSLQTLSLDDCQ-LGD--IAIIGDLKKLEILTLRGSNMQKLV-EEIGRLTQLRLLDLSNCS 598 (1003)
Q Consensus 523 ~L~L~~~~~~~lp~~i~~L~~L~~L~L~~~~-l~~--~~~l~~l~~L~~L~l~~~~i~~lp-~~~~~l~~L~~L~l~~c~ 598 (1003)
.++.++......|..+..+++|+.|++.++. ++. +..+..+++|+.|++++|.++.++ ..+..+++|++|++++ +
T Consensus 12 ~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~-N 90 (156)
T d2ifga3 12 GLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF-N 90 (156)
T ss_dssp CEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS-S
T ss_pred EEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCC-C
T ss_conf 698528997658600257656574316898664436921225666667216202124774201112455433332267-8
Q ss_pred CCCCCCHHHHHCCCCCCEEECCCCCC
Q ss_conf 89753935541687887898358976
Q 001860 599 KLKVIPANVISSLSRIEELYIGESPI 624 (1003)
Q Consensus 599 ~l~~~p~~~l~~l~~L~~L~l~~~~~ 624 (1003)
.++.+|.+.+. ..+|+.|++++|++
T Consensus 91 ~l~~l~~~~~~-~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 91 ALESLSWKTVQ-GLSLQELVLSGNPL 115 (156)
T ss_dssp CCSCCCSTTTC-SCCCCEEECCSSCC
T ss_pred CCCCCCHHHHC-CCCCCCCCCCCCCC
T ss_conf 78515745633-53212433579863
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.80 E-value=3.5e-08 Score=64.22 Aligned_cols=81 Identities=23% Similarity=0.147 Sum_probs=33.8
Q ss_pred CCCCCCEEEEECCC-CCCCCC-CCCCCCCCCCEEECCCCCCCC--CCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCE
Q ss_conf 19986229983698-564688-222489679799734778899--52335766677776227678534053208878998
Q 001860 516 SGMIGLRVLDFTKM-HLLALP-SSLGLLQSLQTLSLDDCQLGD--IAIIGDLKKLEILTLRGSNMQKLVEEIGRLTQLRL 591 (1003)
Q Consensus 516 ~~l~~L~~L~L~~~-~~~~lp-~~i~~L~~L~~L~L~~~~l~~--~~~l~~l~~L~~L~l~~~~i~~lp~~~~~l~~L~~ 591 (1003)
.+++.|+.|++.++ .++.++ ..|..+++|+.|++++|.++. +..+..+++|++|++++|.++.+|..+.....|++
T Consensus 28 ~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~~l~~ 107 (156)
T d2ifga3 28 PGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQE 107 (156)
T ss_dssp CSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCCE
T ss_pred CCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCCCCCCC
T ss_conf 57656574316898664436921225666667216202124774201112455433332267878515745633532124
Q ss_pred EECCC
Q ss_conf 83447
Q 001860 592 LDLSN 596 (1003)
Q Consensus 592 L~l~~ 596 (1003)
|++++
T Consensus 108 L~L~~ 112 (156)
T d2ifga3 108 LVLSG 112 (156)
T ss_dssp EECCS
T ss_pred CCCCC
T ss_conf 33579
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.71 E-value=1.1e-08 Score=67.33 Aligned_cols=36 Identities=8% Similarity=0.104 Sum_probs=13.7
Q ss_pred CCCCCEEEEECCCCCCC-----CCCCCCCCCCCCEEECCCC
Q ss_conf 99862299836985646-----8822248967979973477
Q 001860 517 GMIGLRVLDFTKMHLLA-----LPSSLGLLQSLQTLSLDDC 552 (1003)
Q Consensus 517 ~l~~L~~L~L~~~~~~~-----lp~~i~~L~~L~~L~L~~~ 552 (1003)
....++.|+++++.+.. +...+...++|+.++++++
T Consensus 29 ~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~ 69 (344)
T d2ca6a1 29 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDI 69 (344)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSC
T ss_pred HCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 38997889784983778999999999985899888888777
No 38
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.64 E-value=7.9e-09 Score=68.25 Aligned_cols=41 Identities=22% Similarity=0.202 Sum_probs=19.0
Q ss_pred CCCCCCCCCCCCEEECCCCCCCC--C----CCCCCCCCCCEEECCCC
Q ss_conf 88222489679799734778899--5----23357666777762276
Q 001860 534 LPSSLGLLQSLQTLSLDDCQLGD--I----AIIGDLKKLEILTLRGS 574 (1003)
Q Consensus 534 lp~~i~~L~~L~~L~L~~~~l~~--~----~~l~~l~~L~~L~l~~~ 574 (1003)
+...+.....|+.|++++|.+.. . ..+...++|+.++++++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~ 69 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDI 69 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSC
T ss_pred HHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 99999638997889784983778999999999985899888888777
No 39
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=98.58 E-value=1e-06 Score=55.08 Aligned_cols=113 Identities=18% Similarity=0.223 Sum_probs=77.8
Q ss_pred CCCCCCHHHHHHHHHHHHHC------CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
Q ss_conf 21113528999999999707------993299999179853999999999984442676549999974860799999999
Q 001860 150 FVHFQSRKCTLKEILDALSN------RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEI 223 (1003)
Q Consensus 150 ~~~~~gr~~~~~~l~~~l~~------~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i 223 (1003)
+..++||+.+++++.++|.. ...+.+.|+|++|+|||++|+.+++.......| ..+|+..............+
T Consensus 15 p~~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 93 (276)
T d1fnna2 15 PKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTA-RFVYINGFIYRNFTAIIGEI 93 (276)
T ss_dssp CSCCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCC-EEEEEETTTCCSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCC-CEEEECCHHHHHHHHHHHHH
T ss_conf 88788779999999999999985789888816888989998999999999997544688-57873230011246665456
Q ss_pred HHHHCCCCHHH--HHHHHHHHHHHHHH-CCCEEEEEEECCCCC
Q ss_conf 99919972123--44899999999982-398499999199983
Q 001860 224 AEKMGLRLVEE--IETVRAGRLYERLK-VEKKILIILDDIWGS 263 (1003)
Q Consensus 224 ~~~l~~~~~~~--~~~~~~~~l~~~l~-~~kr~LiVlDdv~~~ 263 (1003)
..+.+...... ........+.+... ......+++|++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 136 (276)
T d1fnna2 94 ARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNL 136 (276)
T ss_dssp HHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGS
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 7764334555325435789999998752065433203688875
No 40
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.36 E-value=8.9e-07 Score=55.47 Aligned_cols=52 Identities=19% Similarity=0.198 Sum_probs=45.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 7982111352899999999970799329999917985399999999998444
Q 001860 147 TQGFVHFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 147 ~~~~~~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
|...++++|.++.++.+..|+..+....+-++|+.|+||||+|+.+.+....
T Consensus 20 P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l~~ 71 (231)
T d1iqpa2 20 PQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFG 71 (231)
T ss_dssp CCSTTTCCSCHHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHHG
T ss_pred CCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9989991393999999999998599976999789997487999999999873
No 41
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.34 E-value=3.2e-06 Score=52.05 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=64.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC----CCCEEEE-EEECCCCCHHHHHHHHHH
Q ss_conf 11135289999999997079932999991798539999999999844426----7654999-997486079999999999
Q 001860 151 VHFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENK----LFEKVIS-AHVSRTPQIKKIQEEIAE 225 (1003)
Q Consensus 151 ~~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~w-v~vs~~~~~~~i~~~i~~ 225 (1003)
+.++||++++++++..|....-.-+.++|.+|+|||+++..++++..... ..+..+| ++++.-
T Consensus 18 d~~igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~l------------ 85 (268)
T d1r6bx2 18 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL------------ 85 (268)
T ss_dssp CCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC--------------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHH------------
T ss_conf 86638099999999999547668967988898867799999999998178450003541278640567------------
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 91997212344899999999982398499999199983
Q 001860 226 KMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 226 ~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
+........-......+...+...+..++++|++-..
T Consensus 86 -iag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l 122 (268)
T d1r6bx2 86 -LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI 122 (268)
T ss_dssp --CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTT
T ss_pred -HCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHH
T ss_conf -5067630058999999999861267846884336988
No 42
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.32 E-value=5.9e-06 Score=50.37 Aligned_cols=114 Identities=20% Similarity=0.210 Sum_probs=73.5
Q ss_pred CCCCCCHHHHHHHHHHHHH----C----CC-CEEEEEECCCCCHHHHHHHHHHHHHHHC----CCCCEEEEEEECCCCCH
Q ss_conf 2111352899999999970----7----99-3299999179853999999999984442----67654999997486079
Q 001860 150 FVHFQSRKCTLKEILDALS----N----RK-FNMIGVYGMGGVGKTTLVKEVGRKAKEN----KLFEKVISAHVSRTPQI 216 (1003)
Q Consensus 150 ~~~~~gr~~~~~~l~~~l~----~----~~-~~vi~I~G~gGiGKTtLa~~v~~~~~~~----~~F~~~~wv~vs~~~~~ 216 (1003)
+..+.||+++++++.+.+. . .. ..++.++|++|+|||++++.+.+..... .......++........
T Consensus 15 P~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 94 (287)
T d1w5sa2 15 PPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNL 94 (287)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCH
T ss_conf 99888789999999999999997499888853489967899989999999999998754155567841663033334650
Q ss_pred HHHHHHHHHHHCCCCHH--HHHHHHHHHHHHHHH-CCCEEEEEEECCCCC
Q ss_conf 99999999991997212--344899999999982-398499999199983
Q 001860 217 KKIQEEIAEKMGLRLVE--EIETVRAGRLYERLK-VEKKILIILDDIWGS 263 (1003)
Q Consensus 217 ~~i~~~i~~~l~~~~~~--~~~~~~~~~l~~~l~-~~kr~LiVlDdv~~~ 263 (1003)
......+...++..... .........+.+... .+....+++|.+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l 144 (287)
T d1w5sa2 95 YTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSM 144 (287)
T ss_dssp HHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf 46788876530432333451278899999999985467665412578885
No 43
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.20 E-value=2.7e-06 Score=52.51 Aligned_cols=103 Identities=20% Similarity=0.255 Sum_probs=64.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 79821113528999999999707993299999179853999999999984442676549999974860799999999999
Q 001860 147 TQGFVHFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEK 226 (1003)
Q Consensus 147 ~~~~~~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~ 226 (1003)
|....+++|.++.++.+..|+.+....-+-++|+.|+||||+|+.+.+....+..-..+.-++.+.......+...+...
T Consensus 11 P~~~~d~ig~~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~~~i~~~~~~~ 90 (224)
T d1sxjb2 11 PQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHF 90 (224)
T ss_dssp CSSGGGCCSCTHHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSHHHHHTHHHHH
T ss_pred CCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHH
T ss_conf 89899902979999999999986998749998899987054699999997256643221111134557852116678878
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 1997212344899999999982398499999199983
Q 001860 227 MGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 227 l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
..... ....++.-.+|+|++...
T Consensus 91 ~~~~~--------------~~~~~~~kviiiDe~d~~ 113 (224)
T d1sxjb2 91 AQKKL--------------HLPPGKHKIVILDEADSM 113 (224)
T ss_dssp HHBCC--------------CCCTTCCEEEEEESGGGS
T ss_pred HHHHC--------------CCCCCCEEEEEEECCCCC
T ss_conf 87622--------------477763599998244323
No 44
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.18 E-value=3.2e-06 Score=51.99 Aligned_cols=70 Identities=16% Similarity=0.231 Sum_probs=50.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
Q ss_conf 7982111352899999999970799329999917985399999999998444267654999997486079
Q 001860 147 TQGFVHFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQI 216 (1003)
Q Consensus 147 ~~~~~~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~ 216 (1003)
|....+++|.++.++.+..|+..+....+-++|+.|+||||+|+.+.+............-.+.+.....
T Consensus 10 P~~~~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~ 79 (227)
T d1sxjc2 10 PETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGI 79 (227)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSH
T ss_pred CCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCE
T ss_conf 8999983596999999999997699985999889987755899999998516777641577315556875
No 45
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.11 E-value=2e-05 Score=47.05 Aligned_cols=97 Identities=18% Similarity=0.253 Sum_probs=61.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC----CCCEEEE-EEECCCCCHHHHHHHHHHH
Q ss_conf 1135289999999997079932999991798539999999999844426----7654999-9974860799999999999
Q 001860 152 HFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENK----LFEKVIS-AHVSRTPQIKKIQEEIAEK 226 (1003)
Q Consensus 152 ~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~w-v~vs~~~~~~~i~~~i~~~ 226 (1003)
..+||++++++++..|....-.-+.++|.+|+|||+++..++++..... .-+..+| ++++. + +
T Consensus 23 ~~igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~------L----i-- 90 (195)
T d1jbka_ 23 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA------L----V-- 90 (195)
T ss_dssp CCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHH------H----H--
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHH------H----H--
T ss_conf 872809999999999953588873998358754479999999999808999788185699966999------8----6--
Q ss_pred HCCCCHHHHHHHHHHHHHHHH-HCCCEEEEEEECCC
Q ss_conf 199721234489999999998-23984999991999
Q 001860 227 MGLRLVEEIETVRAGRLYERL-KVEKKILIILDDIW 261 (1003)
Q Consensus 227 l~~~~~~~~~~~~~~~l~~~l-~~~kr~LiVlDdv~ 261 (1003)
........-......+.+.+ ...++..+++|++-
T Consensus 91 -Ag~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih 125 (195)
T d1jbka_ 91 -AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELH 125 (195)
T ss_dssp -TTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGG
T ss_pred -CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHH
T ss_conf -45874077999999999987317980899726089
No 46
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=98.08 E-value=1.7e-05 Score=47.59 Aligned_cols=100 Identities=18% Similarity=0.256 Sum_probs=60.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC----CCCCEEEE-EEECCCCCHHHHHHHHHH
Q ss_conf 1113528999999999707993299999179853999999999984442----67654999-997486079999999999
Q 001860 151 VHFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKEN----KLFEKVIS-AHVSRTPQIKKIQEEIAE 225 (1003)
Q Consensus 151 ~~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~----~~F~~~~w-v~vs~~~~~~~i~~~i~~ 225 (1003)
+.++||+++++++++.|....-.-+.++|.+|+|||+++..++++.... ...+..+| ++++.--.
T Consensus 22 d~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~a---------- 91 (387)
T d1qvra2 22 DPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLA---------- 91 (387)
T ss_dssp CCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC---------------
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHHHC----------
T ss_conf 9874808999999999824889997687999988999999999999808999788696689955766652----------
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHC-CCEEEEEEECCCCC
Q ss_conf 919972123448999999999823-98499999199983
Q 001860 226 KMGLRLVEEIETVRAGRLYERLKV-EKKILIILDDIWGS 263 (1003)
Q Consensus 226 ~l~~~~~~~~~~~~~~~l~~~l~~-~kr~LiVlDdv~~~ 263 (1003)
|.....+ -......+...+.. .....+++|++-..
T Consensus 92 --g~~~~g~-~e~r~~~i~~~~~~~~~~~ilfide~h~l 127 (387)
T d1qvra2 92 --GAKYRGE-FEERLKAVIQEVVQSQGEVILFIDELHTV 127 (387)
T ss_dssp --------C-HHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred --CCCCCHH-HHHHHHHHHHHHCCCCCCEEEEECCHHHH
T ss_conf --6674136-89999999998505899669872408888
No 47
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.98 E-value=5e-06 Score=50.79 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=64.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 7982111352899999999970799329999917985399999999998444267-654999997486079999999999
Q 001860 147 TQGFVHFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKL-FEKVISAHVSRTPQIKKIQEEIAE 225 (1003)
Q Consensus 147 ~~~~~~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~-F~~~~wv~vs~~~~~~~i~~~i~~ 225 (1003)
|...++++|.++.++.+..|+.......+-++|..|+||||+|+.+++....... ......++.+.......+...+-.
T Consensus 8 P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
T d1sxjd2 8 PKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN 87 (237)
T ss_dssp CSSTTTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHHHH
T ss_pred CCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCHHHHHHHHH
T ss_conf 89788726939999999999986998859998999998499999999997097633432122002113560678999988
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 91997212344899999999982398499999199983
Q 001860 226 KMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 226 ~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
.......... ..........++-.+|+|++...
T Consensus 88 ~~~~~~~~~~-----~~~~~~~~~~~~~viiiDe~d~l 120 (237)
T d1sxjd2 88 FARLTVSKPS-----KHDLENYPCPPYKIIILDEADSM 120 (237)
T ss_dssp HHHSCCCCCC-----TTHHHHSCCCSCEEEEETTGGGS
T ss_pred HHHHHHHHHH-----HHHHHHCCCCCCEEEEEECCCCC
T ss_conf 7654443246-----78776135667369999551336
No 48
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.83 E-value=9.8e-05 Score=42.78 Aligned_cols=50 Identities=22% Similarity=0.351 Sum_probs=42.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCC-EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9821113528999999999707993-2999991798539999999999844
Q 001860 148 QGFVHFQSRKCTLKEILDALSNRKF-NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 148 ~~~~~~~gr~~~~~~l~~~l~~~~~-~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
....+++|.++.++.+..++..++. ..+-++|..|+||||+|+.+.+...
T Consensus 9 ~~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~ 59 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 59 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 989881595999999999998599870598888998758999999999846
No 49
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.81 E-value=2.5e-05 Score=46.45 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=62.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHC-----------------CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 79821113528999999999707-----------------9932999991798539999999999844426765499999
Q 001860 147 TQGFVHFQSRKCTLKEILDALSN-----------------RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAH 209 (1003)
Q Consensus 147 ~~~~~~~~gr~~~~~~l~~~l~~-----------------~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~ 209 (1003)
|....+++|.++.++++..|+.. ...+.+-++|+.|+||||+|+.+++.... .+.++.
T Consensus 10 P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~-----~~~~~~ 84 (253)
T d1sxja2 10 PTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGY-----DILEQN 84 (253)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTC-----EEEEEC
T ss_pred CCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH-----HHHCCC
T ss_conf 999999669899999999999962530023432320257888744999879999888999999999875-----120134
Q ss_pred ECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 748607999999999991997212344899999999982398499999199983
Q 001860 210 VSRTPQIKKIQEEIAEKMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 210 vs~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
.+...+...+... .+............. .........++..++++|++...
T Consensus 85 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vi~ide~~~~ 135 (253)
T d1sxja2 85 ASDVRSKTLLNAG-VKNALDNMSVVGYFK--HNEEAQNLNGKHFVIIMDEVDGM 135 (253)
T ss_dssp TTSCCCHHHHHHT-GGGGTTBCCSTTTTT--C----CCSSTTSEEEEECSGGGC
T ss_pred CCCCHHHHHHHHH-HHHHHHCCHHHHHHH--HHHHCCCCCCCCEEEEEEECCCC
T ss_conf 4322116889999-988763121210133--43201455665137776301111
No 50
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=97.74 E-value=0.00021 Score=40.67 Aligned_cols=94 Identities=14% Similarity=0.138 Sum_probs=53.6
Q ss_pred CCCCCCHHHHHHHHHHHHH----------CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
Q ss_conf 2111352899999999970----------799329999917985399999999998444267654999997486079999
Q 001860 150 FVHFQSRKCTLKEILDALS----------NRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKI 219 (1003)
Q Consensus 150 ~~~~~gr~~~~~~l~~~l~----------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i 219 (1003)
..+++|..+.++.+++... ....+-|-++|++|.|||++|+.+++..... | +.+..+...
T Consensus 8 ~~~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~--~---~~i~~~~~~----- 77 (246)
T d1d2na_ 8 MNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFP--F---IKICSPDKM----- 77 (246)
T ss_dssp TTCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCS--E---EEEECGGGC-----
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC--C---CCCCCCCCC-----
T ss_conf 069847687999999999999999863688998079988969998899999986201002--3---334565223-----
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 9999999199721234489999999998239849999919998
Q 001860 220 QEEIAEKMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWG 262 (1003)
Q Consensus 220 ~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~ 262 (1003)
. .............+.+......+..|++|+++.
T Consensus 78 --------~-g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~ 111 (246)
T d1d2na_ 78 --------I-GFSETAKCQAMKKIFDDAYKSQLSCVVVDDIER 111 (246)
T ss_dssp --------T-TCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHH
T ss_pred --------C-CCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHH
T ss_conf --------5-654211224444456555532422233102566
No 51
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=97.73 E-value=9e-05 Score=43.01 Aligned_cols=70 Identities=13% Similarity=0.176 Sum_probs=47.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHH-----CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH
Q ss_conf 982111352899999999970-----799329999917985399999999998444267654999997486079999999
Q 001860 148 QGFVHFQSRKCTLKEILDALS-----NRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEE 222 (1003)
Q Consensus 148 ~~~~~~~gr~~~~~~l~~~l~-----~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~ 222 (1003)
...++++|.++.++++..++. ....+-+-++|++|+||||+|+.+++..... ..+++.+...........
T Consensus 6 ~~~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~-----~~~~~~~~~~~~~~~~~~ 80 (239)
T d1ixsb2 6 KTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVN-----LRVTSGPAIEKPGDLAAI 80 (239)
T ss_dssp CSGGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHHTCC-----EEEEETTTCCSHHHHHHH
T ss_pred CCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-----EEECCCCCCCCCHHHHHH
T ss_conf 988894898999999999999787358888738988979987888999999984987-----475468753432146899
No 52
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=97.72 E-value=0.00013 Score=42.08 Aligned_cols=50 Identities=22% Similarity=0.311 Sum_probs=40.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHH-----CCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 982111352899999999970-----79932999991798539999999999844
Q 001860 148 QGFVHFQSRKCTLKEILDALS-----NRKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 148 ~~~~~~~gr~~~~~~l~~~l~-----~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
...++++|.++.++++..|+. ....+-+-++|++|+||||+|+.+.+...
T Consensus 6 ~~~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~~ 60 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQ 60 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHT
T ss_pred CCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 9299908959999999999997885388777489879999738899999985038
No 53
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.60 E-value=1.9e-06 Score=53.36 Aligned_cols=80 Identities=20% Similarity=0.241 Sum_probs=36.4
Q ss_pred CCCCCCCEEECCCCCCCCC----CCCCCCCCCCEEECCCCCCCCCCH-HHCCCCCCCEEECCCCCCCCCCC------HHH
Q ss_conf 4896797997347788995----233576667777622767853405-32088789988344787897539------355
Q 001860 539 GLLQSLQTLSLDDCQLGDI----AIIGDLKKLEILTLRGSNMQKLVE-EIGRLTQLRLLDLSNCSKLKVIP------ANV 607 (1003)
Q Consensus 539 ~~L~~L~~L~L~~~~l~~~----~~l~~l~~L~~L~l~~~~i~~lp~-~~~~l~~L~~L~l~~c~~l~~~p------~~~ 607 (1003)
..+++|++|++++|.++.. ..+..+++|+.|++++|.++.++. ......+|+.|++.++....... ..+
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred HHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHH
T ss_conf 74878788637776666773158898658856100043572134234422203310426648997676766615699999
Q ss_pred HHCCCCCCEEE
Q ss_conf 41687887898
Q 001860 608 ISSLSRIEELY 618 (1003)
Q Consensus 608 l~~l~~L~~L~ 618 (1003)
+..+|+|+.|+
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
T ss_conf 99889978799
No 54
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=97.55 E-value=0.00029 Score=39.88 Aligned_cols=94 Identities=20% Similarity=0.231 Sum_probs=55.8
Q ss_pred CCCCCCCHHHHHHHHHHHH---HC---------CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
Q ss_conf 8211135289999999997---07---------99329999917985399999999998444267654999997486079
Q 001860 149 GFVHFQSRKCTLKEILDAL---SN---------RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQI 216 (1003)
Q Consensus 149 ~~~~~~gr~~~~~~l~~~l---~~---------~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~ 216 (1003)
.+++++|.++.++++.+.+ .. ...+-+-++|++|.|||++|+.+.+..... .+.+..+.-.+
T Consensus 10 t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~-----~~~i~~~~l~~- 83 (256)
T d1lv7a_ 10 TFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVP-----FFTISGSDFVE- 83 (256)
T ss_dssp CGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCC-----EEEECSCSSTT-
T ss_pred CHHHHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCC-----EEEEEHHHHHH-
T ss_conf 999981639999999999999879999998699988867866899888228999999982998-----79988699426-
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 9999999999199721234489999999998239849999919998
Q 001860 217 KKIQEEIAEKMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWG 262 (1003)
Q Consensus 217 ~~i~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~ 262 (1003)
....+. ......+.+..+...++.|++||++.
T Consensus 84 -------------~~~g~~-~~~l~~~f~~A~~~~P~il~iDeiD~ 115 (256)
T d1lv7a_ 84 -------------MFVGVG-ASRVRDMFEQAKKAAPCIIFIDEIDA 115 (256)
T ss_dssp -------------SCCCCC-HHHHHHHHHHHHTTCSEEEEETTHHH
T ss_pred -------------CCHHHH-HHHHHHHHHHHHHCCCEEEEEECHHH
T ss_conf -------------001078-99999999999975998999977566
No 55
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=97.51 E-value=0.00035 Score=39.36 Aligned_cols=94 Identities=26% Similarity=0.305 Sum_probs=55.5
Q ss_pred CCCCCCCHHHHHHHHHHHH---HC---------CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
Q ss_conf 8211135289999999997---07---------99329999917985399999999998444267654999997486079
Q 001860 149 GFVHFQSRKCTLKEILDAL---SN---------RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQI 216 (1003)
Q Consensus 149 ~~~~~~gr~~~~~~l~~~l---~~---------~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~ 216 (1003)
.+++++|-++.+++|.+.+ .. ...+-+-++|..|.|||++|+.+.+..... .+.+..+
T Consensus 7 ~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~-----~~~i~~~----- 76 (247)
T d1ixza_ 7 TFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVP-----FITASGS----- 76 (247)
T ss_dssp CGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCC-----EEEEEHH-----
T ss_pred CHHHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC-----EEEEEHH-----
T ss_conf 499971579999999999999879999997599988648876689888359999999873997-----7997869-----
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 9999999999199721234489999999998239849999919998
Q 001860 217 KKIQEEIAEKMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWG 262 (1003)
Q Consensus 217 ~~i~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~ 262 (1003)
.+.. ....+. ......+.+......++.|++||++.
T Consensus 77 -~l~~--------~~~g~~-~~~l~~~f~~a~~~~p~Ii~iDeid~ 112 (247)
T d1ixza_ 77 -DFVE--------MFVGVG-AARVRDLFETAKRHAPCIVFIDEIDA 112 (247)
T ss_dssp -HHHH--------SCTTHH-HHHHHHHHHHHTTSSSEEEEEETHHH
T ss_pred -HHHH--------CCCCHH-HHHHHHHHHHHHHCCCEEEEEECHHH
T ss_conf -9646--------245389-99999999999976997999977366
No 56
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.46 E-value=0.00072 Score=37.38 Aligned_cols=95 Identities=18% Similarity=0.280 Sum_probs=56.0
Q ss_pred CCCCCCCHHHHHHHHHHHHH----C---------CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf 82111352899999999970----7---------9932999991798539999999999844426765499999748607
Q 001860 149 GFVHFQSRKCTLKEILDALS----N---------RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQ 215 (1003)
Q Consensus 149 ~~~~~~gr~~~~~~l~~~l~----~---------~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~ 215 (1003)
.++++.|-+..+++|.+.+. . ...+-+-++|++|.|||++|+++.+..... | +.+..+
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~--~---~~i~~~---- 72 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF--F---FLINGP---- 72 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCE--E---EEECHH----
T ss_pred CHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCE--E---EEEECH----
T ss_conf 7666310999999999999988319999986799988646876699888308999999874883--7---999730----
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 999999999991997212344899999999982398499999199983
Q 001860 216 IKKIQEEIAEKMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 216 ~~~i~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
. +........ ......+.+.....+++.|++||+...
T Consensus 73 --~--------l~~~~~g~~-~~~l~~~f~~A~~~~p~il~iDeid~l 109 (258)
T d1e32a2 73 --E--------IMSKLAGES-ESNLRKAFEEAEKNAPAIIFIDELDAI 109 (258)
T ss_dssp --H--------HTTSCTTHH-HHHHHHHHHHHHHTCSEEEEESSGGGT
T ss_pred --H--------HCCCCCCCH-HHHHHHHHHHHHHCCCEEEEEHHHHHH
T ss_conf --4--------302545617-888899999998649949985211132
No 57
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.39 E-value=7.9e-05 Score=43.36 Aligned_cols=50 Identities=12% Similarity=0.131 Sum_probs=40.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 798211135289999999997079-93299999179853999999999984
Q 001860 147 TQGFVHFQSRKCTLKEILDALSNR-KFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 147 ~~~~~~~~gr~~~~~~l~~~l~~~-~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
|...++++|+++..+.+..++... ...-+-++|++|+||||+|+.+++..
T Consensus 7 P~~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l 57 (252)
T d1sxje2 7 PKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 57 (252)
T ss_dssp CCSGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHH
T ss_pred CCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 897988358399999999999769987859988999998899999999762
No 58
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.29 E-value=2.1e-05 Score=46.91 Aligned_cols=79 Identities=24% Similarity=0.226 Sum_probs=37.0
Q ss_pred HCCCCCCEEEEECCCCCCCCC---CCCCCCCCCCEEECCCCCCCCCCCCC--CCCCCCEEECCCCCCCCCC--------H
Q ss_conf 319986229983698564688---22248967979973477889952335--7666777762276785340--------5
Q 001860 515 FSGMIGLRVLDFTKMHLLALP---SSLGLLQSLQTLSLDDCQLGDIAIIG--DLKKLEILTLRGSNMQKLV--------E 581 (1003)
Q Consensus 515 ~~~l~~L~~L~L~~~~~~~lp---~~i~~L~~L~~L~L~~~~l~~~~~l~--~l~~L~~L~l~~~~i~~lp--------~ 581 (1003)
+..++.|++|++++|.++.++ ..+..+++|++|++++|.++.++.+. ...+|+.|++.+|.+.... .
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred HHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHH
T ss_conf 97487878863777666677315889865885610004357213423442220331042664899767676661569999
Q ss_pred HHCCCCCCCEEE
Q ss_conf 320887899883
Q 001860 582 EIGRLTQLRLLD 593 (1003)
Q Consensus 582 ~~~~l~~L~~L~ 593 (1003)
.+..+++|+.|+
T Consensus 141 i~~~~P~L~~LD 152 (162)
T d1koha1 141 IRERFPKLLRLD 152 (162)
T ss_dssp HHTTSTTCCEET
T ss_pred HHHHCCCCCEEC
T ss_conf 999889978799
No 59
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.15 E-value=0.00064 Score=37.70 Aligned_cols=94 Identities=14% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCCCCCHHHHHHHHHHHH----H---------CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
Q ss_conf 211135289999999997----0---------799329999917985399999999998444267654999997486079
Q 001860 150 FVHFQSRKCTLKEILDAL----S---------NRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQI 216 (1003)
Q Consensus 150 ~~~~~gr~~~~~~l~~~l----~---------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~ 216 (1003)
++++.|.++.+++|.+.+ . -...+-|-++|..|.|||++|+++++..... | +.++.
T Consensus 6 f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~--~-----~~~~~---- 74 (265)
T d1r7ra3 6 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--F-----ISIKG---- 74 (265)
T ss_dssp CSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCE--E-----EEECH----
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC--E-----EEEEH----
T ss_conf 999667899999999999999639999986799988757887899876304778878771894--7-----99887----
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 99999999991997212344899999999982398499999199983
Q 001860 217 KKIQEEIAEKMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 217 ~~i~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
..+. ....... ......+........+++|++||++..
T Consensus 75 ~~l~--------~~~~~~~-~~~l~~~f~~A~~~~p~il~ideid~l 112 (265)
T d1r7ra3 75 PELL--------TMWFGES-EANVREIFDKARQAAPCVLFFDELDSI 112 (265)
T ss_dssp HHHH--------TSCTTTH-HHHHHHHHHHHHHTCSEEEEESSGGGT
T ss_pred HHHH--------HCCCCCH-HHHHHHHHHHHHHCCCCCEEHHHHHHC
T ss_conf 9952--------5316515-899999999998639843568754632
No 60
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.11 E-value=0.005 Score=32.13 Aligned_cols=86 Identities=16% Similarity=0.147 Sum_probs=57.8
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHH
Q ss_conf 932999991798539999999999844426765499999748607999999999991997212-----344899999999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEKMGLRLVE-----EIETVRAGRLYE 245 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~-----~~~~~~~~~l~~ 245 (1003)
.-+++-|+|..|.||||+|.+++...... -..++|++....++.+. +++++.+.+. ....+..-.+.+
T Consensus 59 ~g~i~e~~G~~~~GKT~l~l~~~~~~q~~--g~~~vyIDtE~~~~~e~-----a~~~GvD~d~il~~~~~~~E~~~~~~~ 131 (269)
T d1mo6a1 59 RGRVIEIYGPESSGKTTVALHAVANAQAA--GGVAAFIDAEHALDPDY-----AKKLGVDTDSLLVSQPDTGEQALEIAD 131 (269)
T ss_dssp SSSEEEEECSSSSSHHHHHHHHHHHHHHT--TCEEEEEESSCCCCHHH-----HHHHTCCGGGCEEECCSSHHHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCHHH-----HHHHCCCHHHEEEECCCCHHHHHHHHH
T ss_conf 63369996488748899999999987548--98899998976679999-----998099889958966998999999999
Q ss_pred HH-HCCCEEEEEEECCCCC
Q ss_conf 98-2398499999199983
Q 001860 246 RL-KVEKKILIILDDIWGS 263 (1003)
Q Consensus 246 ~l-~~~kr~LiVlDdv~~~ 263 (1003)
.+ ..++.-|+|+|.+-..
T Consensus 132 ~l~~~~~~~liIiDSi~al 150 (269)
T d1mo6a1 132 MLIRSGALDIVVIDSVAAL 150 (269)
T ss_dssp HHHHTTCEEEEEEECSTTC
T ss_pred HHHHCCCCCEEEEECCCCC
T ss_conf 9985599878999330245
No 61
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.05 E-value=0.0057 Score=31.79 Aligned_cols=42 Identities=10% Similarity=0.214 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHHCCCC-EEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 528999999999707993-299999179853999999999984
Q 001860 155 SRKCTLKEILDALSNRKF-NMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 155 gr~~~~~~l~~~l~~~~~-~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.-++..+++.+.+..++. ..+-++|..|+||||+|+.+.+..
T Consensus 6 w~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l 48 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYL 48 (207)
T ss_dssp GGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 2199999999999859967379888999875999999999821
No 62
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.98 E-value=0.0012 Score=36.05 Aligned_cols=102 Identities=14% Similarity=0.211 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHHHHH---------CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH
Q ss_conf 11352899999999970---------799329999917985399999999998444267654999997486079999999
Q 001860 152 HFQSRKCTLKEILDALS---------NRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEE 222 (1003)
Q Consensus 152 ~~~gr~~~~~~l~~~l~---------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~ 222 (1003)
.++|.+++++.+...+. +....++..+|+.|+|||.||+.+..-.. ...+-++.+.-.+...
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~-----~~~i~~d~s~~~~~~~---- 93 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG-----IELLRFDMSEYMERHT---- 93 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHT-----CEEEEEEGGGCSSSSC----
T ss_pred EECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC-----CCEEEECCCCCCCHHH----
T ss_conf 0648599999999999999726788888765899977875006999999986336-----7706741544455446----
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 99991997212344899999999982398499999199983
Q 001860 223 IAEKMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 223 i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
+.+-++... ..........+.+.+.......+.+|++...
T Consensus 94 ~~~l~g~~~-gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa 133 (315)
T d1r6bx3 94 VSRLIGAPP-GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 133 (315)
T ss_dssp CSSSCCCCS-CSHHHHHTTHHHHHHHHCSSEEEEEETGGGS
T ss_pred HHHHCCCCC-CCCCCCCCCHHHHHHHHCCCCHHHHCCCCCC
T ss_conf 665214678-7501146870337777385430221222301
No 63
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.90 E-value=0.0075 Score=31.08 Aligned_cols=98 Identities=22% Similarity=0.306 Sum_probs=62.0
Q ss_pred HHHHHHHC-CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC-CHHHHHHHHHHHHCCC---------
Q ss_conf 99999707-993299999179853999999999984442676549999974860-7999999999991997---------
Q 001860 162 EILDALSN-RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTP-QIKKIQEEIAEKMGLR--------- 230 (1003)
Q Consensus 162 ~l~~~l~~-~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~-~~~~i~~~i~~~l~~~--------- 230 (1003)
+.++.+.- .+-..++|.|..|+|||+|+..+.+.... .+=+.++++-+.+.. ...++.++..+.--..
T Consensus 57 raID~l~pigkGQr~~If~~~g~GKt~l~~~i~~~~~~-~~~~v~V~~~iGer~~ev~~~~~~~~~~~~~~~~~~~~~tv 135 (276)
T d2jdid3 57 KVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK-AHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVA 135 (276)
T ss_dssp HHHHHHSCEETTCEEEEEECTTSSHHHHHHHHHHHHTT-TCSSEEEEEEESCCHHHHHHHHHHHHHHTSSCSSSSCCCEE
T ss_pred EEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH-HCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEE
T ss_conf 20310256367887776679998989999999998876-17996999995557599999999988617654566642389
Q ss_pred ----CHHHH------HHHHHHHHHHHHH--CCCEEEEEEECC
Q ss_conf ----21234------4899999999982--398499999199
Q 001860 231 ----LVEEI------ETVRAGRLYERLK--VEKKILIILDDI 260 (1003)
Q Consensus 231 ----~~~~~------~~~~~~~l~~~l~--~~kr~LiVlDdv 260 (1003)
..+++ .....-.+.+++. .+++.|+++||+
T Consensus 136 vv~~~s~~~~~~r~~~~~~a~~iAEyf~~~~G~~VLv~~Dsl 177 (276)
T d2jdid3 136 LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 177 (276)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECT
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf 999789999999999999999999998863798489997060
No 64
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=96.83 E-value=0.0065 Score=31.46 Aligned_cols=87 Identities=26% Similarity=0.363 Sum_probs=49.2
Q ss_pred HHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 99999999707--9932999991798539999999999844426765499999748607999999999991997212344
Q 001860 159 TLKEILDALSN--RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEKMGLRLVEEIE 236 (1003)
Q Consensus 159 ~~~~l~~~l~~--~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~~~~ 236 (1003)
+...+.++... .....+-|||..|.|||-|++++++....+ ...+++++.. ++...+...+...
T Consensus 21 a~~~~~~~~~~~~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~--~~~~~~~~~~------~~~~~~~~~~~~~------ 86 (213)
T d1l8qa2 21 AYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKR--GYRVIYSSAD------DFAQAMVEHLKKG------ 86 (213)
T ss_dssp HHHHHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHT--TCCEEEEEHH------HHHHHHHHHHHHT------
T ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC--CCCEEEECHH------HHHHHHHHHHHCC------
T ss_conf 9999999986768778857998889983999999999874467--6504884437------8799999998716------
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 899999999982398499999199983
Q 001860 237 TVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 237 ~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
......+.+. .--++++||+...
T Consensus 87 --~~~~~~~~~~--~~dll~iDDi~~i 109 (213)
T d1l8qa2 87 --TINEFRNMYK--SVDLLLLDDVQFL 109 (213)
T ss_dssp --CHHHHHHHHH--TCSEEEEECGGGG
T ss_pred --CHHHHHHHHH--HCCCHHHHHHHHH
T ss_conf --6266789876--2130101126550
No 65
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=96.79 E-value=0.0013 Score=35.77 Aligned_cols=102 Identities=21% Similarity=0.310 Sum_probs=57.2
Q ss_pred CCCCHHHHHHHHHHHHH---------CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC---HHHH
Q ss_conf 11352899999999970---------79932999991798539999999999844426765499999748607---9999
Q 001860 152 HFQSRKCTLKEILDALS---------NRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQ---IKKI 219 (1003)
Q Consensus 152 ~~~gr~~~~~~l~~~l~---------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~---~~~i 219 (1003)
.++|.+++++.+...+. +....++..+|+.|+|||.+|+.+.+..-.. -+..+-++.+.-.+ ...+
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~--~~~~~~~~~~~~~~~~~~~~L 101 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT--EEAMIRIDMTEYMEKHAVSRL 101 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS--GGGEEEECTTTCCSSGGGGGC
T ss_pred EEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCCCCCCHHHHHH
T ss_conf 270879999999999999865789988876699997888624899999999983588--753488731554542156651
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 99999991997212344899999999982398499999199983
Q 001860 220 QEEIAEKMGLRLVEEIETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 220 ~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
...-....| ......+.+.+....+..+++|++...
T Consensus 102 ~g~~~gyvG--------~~~~~~l~~~~~~~p~~Vvl~DEieK~ 137 (315)
T d1qvra3 102 IGAPPGYVG--------YEEGGQLTEAVRRRPYSVILFDEIEKA 137 (315)
T ss_dssp ----------------------CHHHHHHHCSSEEEEESSGGGS
T ss_pred CCCCCCCCC--------CCCCCHHHHHHHHCCCCEEEEEHHHHC
T ss_conf 489998767--------466784899998499837997147540
No 66
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.78 E-value=0.00057 Score=38.04 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=23.4
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 32999991798539999999999844
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
++.|.|.|+.|+||||||+.+.++..
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~ 32 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFN 32 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 32899989999989999999999849
No 67
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.76 E-value=0.0092 Score=30.50 Aligned_cols=86 Identities=17% Similarity=0.156 Sum_probs=57.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHH
Q ss_conf 932999991798539999999999844426765499999748607999999999991997212-----344899999999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEKMGLRLVE-----EIETVRAGRLYE 245 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~-----~~~~~~~~~l~~ 245 (1003)
.-+++-|+|..|.|||++|.++.......+ ..++|++....++.. +++.+|.+.+. ....+..-.+.+
T Consensus 56 ~g~itei~G~~~sGKT~l~l~~~~~aqk~g--~~v~yiDtE~~~~~~-----~a~~~Gvd~d~i~~~~~~~~E~~~~~~~ 128 (268)
T d1xp8a1 56 RGRITEIYGPESGGKTTLALAIVAQAQKAG--GTCAFIDAEHALDPV-----YARALGVNTDELLVSQPDNGEQALEIME 128 (268)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHTT--CCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCHH-----HHHHHCCCCHHEEEECCCCHHHHHHHHH
T ss_conf 754789805876522799999999997079--989999887658999-----9998289812379974899999999999
Q ss_pred HHH-CCCEEEEEEECCCCC
Q ss_conf 982-398499999199983
Q 001860 246 RLK-VEKKILIILDDIWGS 263 (1003)
Q Consensus 246 ~l~-~~kr~LiVlDdv~~~ 263 (1003)
.+. .++.-|+|+|-+-..
T Consensus 129 ~l~~~~~~~liIiDSi~al 147 (268)
T d1xp8a1 129 LLVRSGAIDVVVVDSVAAL 147 (268)
T ss_dssp HHHTTTCCSEEEEECTTTC
T ss_pred HHHHCCCCCEEEEECCCCC
T ss_conf 9986589719999454545
No 68
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.65 E-value=0.0027 Score=33.77 Aligned_cols=41 Identities=20% Similarity=0.367 Sum_probs=29.8
Q ss_pred HHHHHHHHHH---CCCCEEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 9999999970---7993299999179853999999999984442
Q 001860 159 TLKEILDALS---NRKFNMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 159 ~~~~l~~~l~---~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
.++.|+.... ..+.-+|||.|..|.||||+|+.+.+.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 6 RIDFLCKTILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp HHHHHHHHHHTSCCSSSEEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999985267998899978988789999999999983634
No 69
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.65 E-value=0.0027 Score=33.81 Aligned_cols=15 Identities=13% Similarity=0.290 Sum_probs=5.6
Q ss_pred CCCCCCEEECCCCCC
Q ss_conf 896797997347788
Q 001860 540 LLQSLQTLSLDDCQL 554 (1003)
Q Consensus 540 ~L~~L~~L~L~~~~l 554 (1003)
...+|++|++++|.+
T Consensus 42 ~n~~L~~L~Ls~n~l 56 (167)
T d1pgva_ 42 NSKHIEKFSLANTAI 56 (167)
T ss_dssp TCSCCCEEECTTSCC
T ss_pred HCCCCCEEECCCCCC
T ss_conf 377645401201562
No 70
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=96.63 E-value=0.0013 Score=35.72 Aligned_cols=46 Identities=24% Similarity=0.296 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHHHHHHH--------------CCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 11352899999999970--------------79932999991798539999999999844
Q 001860 152 HFQSRKCTLKEILDALS--------------NRKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 152 ~~~gr~~~~~~l~~~l~--------------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.++|.+++++.+...+. ....+-+.++|++|+|||.||+++++...
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~ 74 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLAN 74 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 134919999999999998987724578776678986699989999888899999862132
No 71
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.51 E-value=0.002 Score=34.68 Aligned_cols=38 Identities=13% Similarity=-0.017 Sum_probs=28.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 932999991798539999999999844426765499999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAH 209 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~ 209 (1003)
+-.+|.+.|+.|.||||+|+.+..+.... +++...++.
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~~-~~~~~~~~~ 42 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQ-GGRSVSLLL 42 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC-CCCCHHHHH
T ss_conf 97699988999999999999999998650-798403211
No 72
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.46 E-value=0.0023 Score=34.20 Aligned_cols=12 Identities=25% Similarity=0.462 Sum_probs=4.3
Q ss_pred CCCCEEECCCCC
Q ss_conf 667777622767
Q 001860 564 KKLEILTLRGSN 575 (1003)
Q Consensus 564 ~~L~~L~l~~~~ 575 (1003)
++|+.|++++|.
T Consensus 44 ~~L~~L~Ls~n~ 55 (167)
T d1pgva_ 44 KHIEKFSLANTA 55 (167)
T ss_dssp SCCCEEECTTSC
T ss_pred CCCCEEECCCCC
T ss_conf 764540120156
No 73
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.43 E-value=0.012 Score=29.78 Aligned_cols=28 Identities=25% Similarity=0.309 Sum_probs=25.0
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9932999991798539999999999844
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+...||.|.|++|.||||+|+.+.++..
T Consensus 6 ~~~~iI~i~GppGSGKsT~a~~La~~~g 33 (196)
T d1ukza_ 6 DQVSVIFVLGGPGAGKGTQCEKLVKDYS 33 (196)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 9972899989999998999999999859
No 74
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=96.43 E-value=0.0078 Score=30.97 Aligned_cols=97 Identities=20% Similarity=0.171 Sum_probs=54.2
Q ss_pred HHHHHHHC-CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE-EECCCCCHHHHHHHHHHHHCCC----CHHH-
Q ss_conf 99999707-993299999179853999999999984442676549999-9748607999999999991997----2123-
Q 001860 162 EILDALSN-RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISA-HVSRTPQIKKIQEEIAEKMGLR----LVEE- 234 (1003)
Q Consensus 162 ~l~~~l~~-~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv-~vs~~~~~~~i~~~i~~~l~~~----~~~~- 234 (1003)
++++.+.- ..-..++|.|..|+|||+|+..+.+..... +-++++.+ .+.+..... .++.+..... ..++
T Consensus 32 r~ID~l~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~~~-~~~~v~~~~~iger~~ev---~~~~~~~~~~vv~~t~d~~ 107 (289)
T d1xpua3 32 RVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYN-HPDCVLMVLLIDERPEEV---TEMQRLVKGEVVASTFDEP 107 (289)
T ss_dssp HHHHHHSCCBTTCEEEEEECSSSSHHHHHHHHHHHHHHH-CTTSEEEEEEEEECHHHH---HHHHHHCSSEEEEEETTSC
T ss_pred EEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEEEEECEEHHHH---HHHHHHCCEEEEECCCCCC
T ss_conf 356412564578755686799988789999999977515-897699987611008788---7677540507996058883
Q ss_pred -----HHHHHHHHHHHHHH-CCCEEEEEEECCCC
Q ss_conf -----44899999999982-39849999919998
Q 001860 235 -----IETVRAGRLYERLK-VEKKILIILDDIWG 262 (1003)
Q Consensus 235 -----~~~~~~~~l~~~l~-~~kr~LiVlDdv~~ 262 (1003)
......-.+.+++. .++..|+++||+-.
T Consensus 108 ~~~r~~~~~~a~~iAEyfrd~G~dVLli~Dsltr 141 (289)
T d1xpua3 108 ASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITR 141 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEESCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH
T ss_conf 5678999999999999999826575155176899
No 75
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.43 E-value=0.0014 Score=35.50 Aligned_cols=28 Identities=25% Similarity=0.334 Sum_probs=24.6
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 3299999179853999999999984442
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
+.|++|+|..|.|||||++++.+....+
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~~~ 29 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALCAR 29 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 7889999189998999999999999977
No 76
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.42 E-value=0.017 Score=28.92 Aligned_cols=83 Identities=19% Similarity=0.205 Sum_probs=53.5
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHHH
Q ss_conf 32999991798539999999999844426765499999748607999999999991997212-----3448999999999
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEKMGLRLVE-----EIETVRAGRLYER 246 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~-----~~~~~~~~~l~~~ 246 (1003)
-+++-|+|..|.||||+|.++........ ..++|++....++... ++.++.+.+. ....+..-.+.+.
T Consensus 54 g~itei~G~~gsGKTtl~l~~~~~~q~~g--~~~vyidtE~~~~~~~-----a~~~Gvd~d~v~~~~~~~~E~~~~~i~~ 126 (263)
T d1u94a1 54 GRIVEIYGPESSGKTTLTLQVIAAAQREG--KTCAFIDAEHALDPIY-----ARKLGVDIDNLLCSQPDTGEQALEICDA 126 (263)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEESSCCCCHHH-----HHHTTCCGGGCEEECCSSHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHCCC--CEEEEECCCCCCCHHH-----HHHHCCCHHHEEEECCCCHHHHHHHHHH
T ss_conf 35899805777478999999999987089--8799986544548999-----9983998799799628989999999999
Q ss_pred HH-CCCEEEEEEECCC
Q ss_conf 82-3984999991999
Q 001860 247 LK-VEKKILIILDDIW 261 (1003)
Q Consensus 247 l~-~~kr~LiVlDdv~ 261 (1003)
+. +++.-|+|+|-+-
T Consensus 127 l~~~~~~~liViDSi~ 142 (263)
T d1u94a1 127 LARSGAVDVIVVDSVA 142 (263)
T ss_dssp HHHHTCCSEEEEECGG
T ss_pred HHHCCCCCEEEEECCC
T ss_conf 9854999899998865
No 77
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=96.36 E-value=0.003 Score=33.55 Aligned_cols=52 Identities=23% Similarity=0.388 Sum_probs=36.2
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 999999970799329999917985399999999998444267654999997486
Q 001860 160 LKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRT 213 (1003)
Q Consensus 160 ~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~ 213 (1003)
+..+.+.+...+.+||.+.|=||+||||+|-.+......++ ..+.-|+....
T Consensus 8 ~~~~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G--~rVllvD~Dp~ 59 (279)
T d1ihua2 8 LSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMG--FDVHLTTSDPA 59 (279)
T ss_dssp HHHHHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEESCCC
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEECCCC
T ss_conf 88999885037978999979998878999999999999789--93899937999
No 78
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=96.35 E-value=0.001 Score=36.44 Aligned_cols=25 Identities=24% Similarity=0.369 Sum_probs=22.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+.|.+.|+.|+||||+|+.+.++..
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~ 27 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLN 27 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 7499989999999999999999969
No 79
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.28 E-value=0.0017 Score=35.13 Aligned_cols=25 Identities=28% Similarity=0.440 Sum_probs=21.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
++|.|.|++|.||||+|+.+.....
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~ 27 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLD 27 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 0899989999998999999999809
No 80
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.28 E-value=0.0015 Score=35.34 Aligned_cols=27 Identities=33% Similarity=0.438 Sum_probs=23.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 299999179853999999999984442
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
|.|.|+|.+|+|||||++++.......
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~ 28 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSS 28 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 699998899971999999999999977
No 81
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.27 E-value=0.015 Score=29.16 Aligned_cols=41 Identities=29% Similarity=0.227 Sum_probs=32.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 9329999917985399999999998444267654999997486
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRT 213 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~ 213 (1003)
.-+++-|+|.+|.|||++|.++...... ....++|++....
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~~~~--~~~~~~~is~e~~ 65 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVENACA--NKERAILFAYEES 65 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHHHHT--TTCCEEEEESSSC
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHH--HCCCCCEEECCCC
T ss_conf 9849999918999999999999999987--2324411212679
No 82
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=96.23 E-value=0.0022 Score=34.39 Aligned_cols=38 Identities=18% Similarity=0.399 Sum_probs=28.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 2999991798539999999999844426765499999748
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSR 212 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~ 212 (1003)
|.|+|+|=||+||||+|-++......++ + .+.-|+...
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G-~-rVllID~D~ 39 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMG-K-TIMVVGCDP 39 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTT-C-CEEEEEECT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCC-C-CEEEEECCC
T ss_conf 7999989985779999999999999689-9-589996379
No 83
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=96.21 E-value=0.0096 Score=30.39 Aligned_cols=64 Identities=25% Similarity=0.254 Sum_probs=40.7
Q ss_pred HHHHHHHHH--CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEE--CCCCCHHHHHHHHHH
Q ss_conf 999999970--799329999917985399999999998444267654999997--486079999999999
Q 001860 160 LKEILDALS--NRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHV--SRTPQIKKIQEEIAE 225 (1003)
Q Consensus 160 ~~~l~~~l~--~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v--s~~~~~~~i~~~i~~ 225 (1003)
..++++.+. .++..+|+|.|.+|.|||||...+......++ ..++-+.+ +..++-..++.+-.+
T Consensus 40 ~~~ll~~~~~~~~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g--~~vavlavDpss~~~ggailgdr~r 107 (327)
T d2p67a1 40 STQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREG--LKVAVIAVDPSSPVTGGSILGDKTR 107 (327)
T ss_dssp HHHHHHHHGGGCSCSEEEEEEECTTSCHHHHHHHHHHHHHHTT--CCEEEEEECCC--------------
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEECCCCCEEEECCCCCCCHHH
T ss_conf 9999998653169832897438999989999999999997569--8332203777610006515541367
No 84
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=96.19 E-value=0.01 Score=30.27 Aligned_cols=41 Identities=24% Similarity=0.520 Sum_probs=31.0
Q ss_pred HHHHHHHHHH--CCCCEEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 9999999970--7993299999179853999999999984442
Q 001860 159 TLKEILDALS--NRKFNMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 159 ~~~~l~~~l~--~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
...++++.+. ..+..+|+|.|.+|.|||||..++.......
T Consensus 36 ~~~~~~~~~~~~~~~~~~igitG~pGaGKSTli~~l~~~~~~~ 78 (323)
T d2qm8a1 36 AVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAA 78 (323)
T ss_dssp HHHHHHHHHGGGCCCSEEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9999999863306981598611799888999999999987636
No 85
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.18 E-value=0.022 Score=28.10 Aligned_cols=87 Identities=11% Similarity=0.051 Sum_probs=51.6
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC--CCCCEEEEEEEC-CCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999999707993299999179853999999999984442--676549999974-860799999999999199721234
Q 001860 159 TLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKEN--KLFEKVISAHVS-RTPQIKKIQEEIAEKMGLRLVEEI 235 (1003)
Q Consensus 159 ~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~--~~F~~~~wv~vs-~~~~~~~i~~~i~~~l~~~~~~~~ 235 (1003)
.++-+.+++..+...-+-++|..|.|||++|....+..... .|.|. .++.-. ....+..+. ++.+.+.....
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~-~~i~~~~~~I~Id~IR-~i~~~~~~~~~--- 76 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDV-LEIDPEGENIGIDDIR-TIKDFLNYSPE--- 76 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTE-EEECCSSSCBCHHHHH-HHHHHHTSCCS---
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCE-EEEECCCCCCCHHHHH-HHHHHHHHCCC---
T ss_conf 789999999669985599889899888999999999984345679988-9980776789989999-99999961754---
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 4899999999982398499999199983
Q 001860 236 ETVRAGRLYERLKVEKKILIILDDIWGS 263 (1003)
Q Consensus 236 ~~~~~~~l~~~l~~~kr~LiVlDdv~~~ 263 (1003)
.+++-.+|+|++...
T Consensus 77 -------------~~~~KviIId~ad~l 91 (198)
T d2gnoa2 77 -------------LYTRKYVIVHDCERM 91 (198)
T ss_dssp -------------SSSSEEEEETTGGGB
T ss_pred -------------CCCCEEEEEECCCCC
T ss_conf -------------589879999473103
No 86
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.16 E-value=0.0022 Score=34.34 Aligned_cols=27 Identities=26% Similarity=0.351 Sum_probs=24.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 299999179853999999999984442
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
++|.|.|+.|.||||+++.+.+....+
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~ 28 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKE 28 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 889998999989899999999999876
No 87
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.13 E-value=0.0022 Score=34.37 Aligned_cols=24 Identities=33% Similarity=0.408 Sum_probs=20.7
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 299999179853999999999984
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
++|.|.|++|.||||+|+++..+.
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 799998999999999999999957
No 88
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=96.12 E-value=0.0053 Score=32.00 Aligned_cols=41 Identities=22% Similarity=0.233 Sum_probs=28.4
Q ss_pred HHHHHHHHHHH----C-CCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999970----7-99329999917985399999999998444
Q 001860 158 CTLKEILDALS----N-RKFNMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 158 ~~~~~l~~~l~----~-~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
+.+.+.+..+. + +..+.|-++|++|.||||+|+.+++....
T Consensus 13 ~~~~~~~~~~~~~~~~~~~P~~ilL~GpPGtGKT~la~~la~~~~~ 58 (273)
T d1gvnb_ 13 NRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQG 58 (273)
T ss_dssp HHHHHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 9999999999841527899979998897998899999999998651
No 89
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.10 E-value=0.0031 Score=33.44 Aligned_cols=28 Identities=21% Similarity=0.201 Sum_probs=24.0
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 3299999179853999999999984442
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
-.+|.+.|+.|.||||+|+.+.......
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9699988999999999999999999744
No 90
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.06 E-value=0.0064 Score=31.47 Aligned_cols=17 Identities=6% Similarity=-0.005 Sum_probs=7.0
Q ss_pred CCCCCCCEEECCCCCCC
Q ss_conf 48967979973477889
Q 001860 539 GLLQSLQTLSLDDCQLG 555 (1003)
Q Consensus 539 ~~L~~L~~L~L~~~~l~ 555 (1003)
...++|+.|++++|.+.
T Consensus 43 ~~n~~L~~L~Ls~n~l~ 59 (166)
T d1io0a_ 43 KTNTYVKKFSIVGTRSN 59 (166)
T ss_dssp TTCCSCCEEECTTSCCC
T ss_pred HCCCCCCEEECCCCCCC
T ss_conf 41982574301589611
No 91
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=95.98 E-value=0.0025 Score=34.02 Aligned_cols=25 Identities=48% Similarity=0.513 Sum_probs=21.6
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
..|.|.|++|.||||+|+.+.++..
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~ 29 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSG 29 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 9798989999998999999999979
No 92
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=95.96 E-value=0.0032 Score=33.36 Aligned_cols=47 Identities=19% Similarity=0.230 Sum_probs=35.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 82111352899999999970799329999917985399999999998
Q 001860 149 GFVHFQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 149 ~~~~~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
++.+++|.+..+..+.-.....+..-+-+.|..|+||||+|+.+..-
T Consensus 5 ~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~i 51 (333)
T d1g8pa_ 5 PFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAAL 51 (333)
T ss_dssp CGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHH
T ss_pred CHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 85140694999999999976469970899889985299999999873
No 93
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=95.95 E-value=0.0034 Score=33.23 Aligned_cols=29 Identities=31% Similarity=0.295 Sum_probs=24.7
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 79932999991798539999999999844
Q 001860 169 NRKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 169 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.....+|.|.|++|.||||+|+.+.++..
T Consensus 3 ~~kp~iI~i~G~pGSGKsT~a~~La~~~g 31 (194)
T d1qf9a_ 3 KSKPNVVFVLGGPGSGKGTQCANIVRDFG 31 (194)
T ss_dssp CCCCEEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 88994899989999988999999999979
No 94
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.95 E-value=0.0035 Score=33.12 Aligned_cols=28 Identities=32% Similarity=0.294 Sum_probs=24.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 2999991798539999999999844426
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENK 200 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~ 200 (1003)
++++|+|..|.|||||+.++....+.++
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~~g 29 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVREG 29 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf 0999980999989999999999998679
No 95
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.95 E-value=0.0035 Score=33.12 Aligned_cols=27 Identities=26% Similarity=0.293 Sum_probs=23.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 299999179853999999999984442
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
.+|.++|.+|.||||+|+++.+.....
T Consensus 3 ~li~l~GlpgsGKSTla~~L~~~l~~~ 29 (213)
T d1bifa1 3 TLIVMVGLPARGKTYISKKLTRYLNFI 29 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 899998999999999999999999746
No 96
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=95.89 E-value=0.031 Score=27.26 Aligned_cols=61 Identities=23% Similarity=0.284 Sum_probs=42.1
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEC-CCCCHHHHHHHHHHHHCCCCH
Q ss_conf 993299999179853999999999984442676549999974-860799999999999199721
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVS-RTPQIKKIQEEIAEKMGLRLV 232 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs-~~~~~~~i~~~i~~~l~~~~~ 232 (1003)
++.+||.++|+.|+||||-+-.++.....++ ..+..|+.. ......+-++...+.++.+..
T Consensus 4 ~~~~vi~lvGptGvGKTTTiaKLA~~~~~~g--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~ 65 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLG--KKVMFCAGDTFRAAGGTQLSEWGKRLSIPVI 65 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHTTT--CCEEEECCCCSSTTHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCCHHHHHHCCCCCCCEEE
T ss_conf 9977999989999988999999999999779--9079998136665402667640545682389
No 97
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=95.88 E-value=0.0041 Score=32.67 Aligned_cols=41 Identities=24% Similarity=0.379 Sum_probs=29.5
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
Q ss_conf 3299999179853999999999984442676549999974860
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTP 214 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~ 214 (1003)
.+.|+|+|=||+||||+|.++.......+ . .+.-|+.....
T Consensus 2 Mr~IaisgKGGVGKTT~a~NLA~~LA~~G-~-rVLlID~DpQ~ 42 (289)
T d2afhe1 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMG-K-KVMIVGCDPKA 42 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTT-C-CEEEEEECSSS
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCC-C-CEEEEECCCCC
T ss_conf 62899989998779999999999999789-9-78999518999
No 98
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.80 E-value=0.033 Score=27.04 Aligned_cols=61 Identities=20% Similarity=0.292 Sum_probs=38.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEC-CCCCHHHHHHHHHHHHCCCCH
Q ss_conf 993299999179853999999999984442676549999974-860799999999999199721
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVS-RTPQIKKIQEEIAEKMGLRLV 232 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs-~~~~~~~i~~~i~~~l~~~~~ 232 (1003)
++.+||.++|..|+||||.+..+....+.+ -..+.-++.. ......+-++...+.++.+..
T Consensus 8 ~~~~vi~lvGp~GvGKTTTiaKLA~~~~~~--g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~ 69 (207)
T d1ls1a2 8 KDRNLWFLVGLQGSGKTTTAAKLALYYKGK--GRRPLLVAADTQRPAAREQLRLLGEKVGVPVL 69 (207)
T ss_dssp CSSEEEEEECCTTTTHHHHHHHHHHHHHHT--TCCEEEEECCSSCHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 998689998999998899999999999977--99279995443464088889999986288631
No 99
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=95.77 E-value=0.014 Score=29.46 Aligned_cols=48 Identities=19% Similarity=0.251 Sum_probs=31.6
Q ss_pred HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH
Q ss_conf 07993299999179853999999999984442676549999974860799
Q 001860 168 SNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIK 217 (1003)
Q Consensus 168 ~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~ 217 (1003)
.+...++|.+.|-||+||||+|..+......++ ..+.-|+.....+..
T Consensus 4 ~~~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G--~rVLlvD~Dp~~~l~ 51 (296)
T d1ihua1 4 LQNIPPYLFFTGKGGVGKTSISCATAIRLAEQG--KRVLLVSTDPASNVG 51 (296)
T ss_dssp GSSCCSEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEECCTTCCHH
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC--CCEEEEECCCCCCHH
T ss_conf 778985999979986749999999999999789--978999579998878
No 100
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.76 E-value=0.034 Score=26.94 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=25.9
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 329999917985399999999998444267654
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEK 204 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~ 204 (1003)
-..|+|-|+.|.||||+++.+.+....++ ++.
T Consensus 3 G~lI~ieG~dGsGKsT~~~~L~~~L~~~g-~~v 34 (209)
T d1nn5a_ 3 GALIVLEGVDRAGKSTQSRKLVEALCAAG-HRA 34 (209)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHTT-CCE
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCC-CCE
T ss_conf 05999989988899999999999998779-968
No 101
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.69 E-value=0.0036 Score=33.04 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=20.7
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 9999179853999999999984442
Q 001860 175 IGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 175 i~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
|.+.||.|+||||+|+.++++....
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~~ 28 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGVG 28 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 8998899998899999999984998
No 102
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=95.68 E-value=0.0055 Score=31.90 Aligned_cols=42 Identities=24% Similarity=0.302 Sum_probs=32.0
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 3299999179853999999999984442676549999974860799999999999
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEK 226 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~ 226 (1003)
..||+|-|++|.||+|+|+.+.++.. |.+ + +...++++++..
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~~g----l~~-----i----StGdLlR~~a~~ 44 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEALQ----WHL-----L----DSGAIYRVLALA 44 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHT----CEE-----E----EHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHC----CCE-----E----CHHHHHHHHHHH
T ss_conf 98899779998898999999999969----908-----9----888999999999
No 103
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=95.67 E-value=0.0035 Score=33.11 Aligned_cols=24 Identities=29% Similarity=0.459 Sum_probs=21.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 999917985399999999998444
Q 001860 175 IGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 175 i~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
|.+.||+|.||||+|+.++++...
T Consensus 3 I~liG~~GsGKsTi~k~La~~l~~ 26 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDLDL 26 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 999899999889999999998399
No 104
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=95.66 E-value=0.038 Score=26.71 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=40.0
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH--HHHHHHHHHHHCCCCH
Q ss_conf 799329999917985399999999998444267654999997486079--9999999999199721
Q 001860 169 NRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQI--KKIQEEIAEKMGLRLV 232 (1003)
Q Consensus 169 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~--~~i~~~i~~~l~~~~~ 232 (1003)
.+...||.++|+.|+||||-+..+....+. ....+.+-....+.+ .+-++...+.++.+..
T Consensus 6 ~~~p~vi~lvGptGvGKTTTiAKLA~~~~~---~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~ 68 (211)
T d2qy9a2 6 GKAPFVILMVGVNGVGKTTTIGKLARQFEQ---QGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVI 68 (211)
T ss_dssp SCTTEEEEEECCTTSCHHHHHHHHHHHHHT---TTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHH---CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 999979999899999989999999999997---799479982321366612045554343388621
No 105
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.66 E-value=0.038 Score=26.69 Aligned_cols=28 Identities=25% Similarity=0.256 Sum_probs=24.0
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9932999991798539999999999844
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+..-+|||.|..|.||||+|+.+.....
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~ 105 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 9988999968999987689999999973
No 106
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=95.57 E-value=0.0049 Score=32.23 Aligned_cols=26 Identities=23% Similarity=0.252 Sum_probs=23.2
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 32999991798539999999999844
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.++|.|.|..|.||||+|+.+.+...
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~ 28 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 85999989999998999999999728
No 107
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.56 E-value=0.035 Score=26.89 Aligned_cols=30 Identities=27% Similarity=0.315 Sum_probs=25.3
Q ss_pred HCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 079932999991798539999999999844
Q 001860 168 SNRKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 168 ~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
....-.+|-+.|++|.||||+|+.+.....
T Consensus 20 ~~~kg~vIwltGlsGsGKTTia~~L~~~l~ 49 (208)
T d1m7ga_ 20 RNQRGLTIWLTGLSASGKSTLAVELEHQLV 49 (208)
T ss_dssp HTSSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HCCCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 589986999989999998999999998877
No 108
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=95.56 E-value=0.0058 Score=31.74 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=22.8
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
..-.|.|.|++|.||||+|+.+.++..
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 988899982899988999999999858
No 109
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=95.54 E-value=0.0068 Score=31.34 Aligned_cols=28 Identities=21% Similarity=0.470 Sum_probs=24.4
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9932999991798539999999999844
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
...+++.|.|+.|.||||+|+.+.....
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l~ 31 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQLH 31 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 9871899989999898999999999869
No 110
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.54 E-value=0.0065 Score=31.45 Aligned_cols=27 Identities=30% Similarity=0.409 Sum_probs=23.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 299999179853999999999984442
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
++|.|.|+.|.||||+++.+.+....+
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 199998989989899999999999876
No 111
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=95.52 E-value=0.035 Score=26.91 Aligned_cols=86 Identities=15% Similarity=0.217 Sum_probs=50.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC-HHHHHHHHHHHHCCC-------CHHH------HHHH
Q ss_conf 2999991798539999999999844426765499999748607-999999999991997-------2123------4489
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQ-IKKIQEEIAEKMGLR-------LVEE------IETV 238 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~-~~~i~~~i~~~l~~~-------~~~~------~~~~ 238 (1003)
..++|+|..|+|||+++...-.... .+-+.++++-+.+... ..++..+....-... ..++ ....
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~~~--~~~~v~V~~~iGer~~Ev~e~~~~~~~~~~~~~tvvv~~tsd~p~~~r~~a~~ 145 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILNQQ--GQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPY 145 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHTCC--TTTCEEEEEEESCCHHHHHHHHHHTGGGTGGGSEEEEEECTTSCGGGTTHHHH
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHC--CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 6676006778885799999776540--46753555552212677889998511577503310012346765999999999
Q ss_pred HHHHHHHHHH-CCCEEEEEEECC
Q ss_conf 9999999982-398499999199
Q 001860 239 RAGRLYERLK-VEKKILIILDDI 260 (1003)
Q Consensus 239 ~~~~l~~~l~-~~kr~LiVlDdv 260 (1003)
..-.+.+++. .+++.|+++||+
T Consensus 146 ~a~tiAEyfrd~G~~Vlll~Dsl 168 (276)
T d1fx0a3 146 TGAALAEYFMYRERHTLIIYDDL 168 (276)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECH
T ss_pred HHHHHHHHHHHCCCCEEEEEECC
T ss_conf 99988889997599645775053
No 112
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=95.51 E-value=0.0042 Score=32.63 Aligned_cols=26 Identities=31% Similarity=0.333 Sum_probs=22.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 29999917985399999999998444
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
+.|.+.|+.|.||||+|+.++++...
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~ 28 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGY 28 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTC
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 98899889999889999999999499
No 113
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.50 E-value=0.038 Score=26.64 Aligned_cols=80 Identities=14% Similarity=-0.025 Sum_probs=43.2
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC-EEEEEEECCCCCHHHHHHHHHHHHCCC-------CHHHHHHHHHHH
Q ss_conf 932999991798539999999999844426765-499999748607999999999991997-------212344899999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFE-KVISAHVSRTPQIKKIQEEIAEKMGLR-------LVEEIETVRAGR 242 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~-~~~wv~vs~~~~~~~i~~~i~~~l~~~-------~~~~~~~~~~~~ 242 (1003)
..-+|||-|..|.||||+|..+......+..+. .++-++...=+-...=...+.+....+ ....-+..+...
T Consensus 26 ~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~~~r~~L~~~~~~~pl~~~RG~PgThD~~ll~~ 105 (286)
T d1odfa_ 26 CPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQE 105 (286)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCHHHHHHHHHHTTTCGGGSSSCSTTSBCHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHH
T ss_conf 98899837998788999999999999987277860676356777788899999852135553110047874034889999
Q ss_pred HHHHHHCC
Q ss_conf 99998239
Q 001860 243 LYERLKVE 250 (1003)
Q Consensus 243 l~~~l~~~ 250 (1003)
....+.++
T Consensus 106 ~l~~l~~~ 113 (286)
T d1odfa_ 106 VLNTIFNN 113 (286)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHHH
T ss_conf 99999740
No 114
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.45 E-value=0.0058 Score=31.74 Aligned_cols=27 Identities=26% Similarity=0.385 Sum_probs=23.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 299999179853999999999984442
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
-||||.|..|.||||+|+.+.+.....
T Consensus 3 ~iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 3 FLIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCHH
T ss_conf 899998999787999999999996410
No 115
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.41 E-value=0.014 Score=29.43 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=14.2
Q ss_pred CCCCCCCEEECCCCCCCC-----CCHHHCCCCCCCEEECCC
Q ss_conf 576667777622767853-----405320887899883447
Q 001860 561 GDLKKLEILTLRGSNMQK-----LVEEIGRLTQLRLLDLSN 596 (1003)
Q Consensus 561 ~~l~~L~~L~l~~~~i~~-----lp~~~~~l~~L~~L~l~~ 596 (1003)
...++|++|++++|.+.. +...+...+.++.+++++
T Consensus 43 ~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~ 83 (166)
T d1io0a_ 43 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVES 83 (166)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCS
T ss_pred HCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCC
T ss_conf 41982574301589611778999998775212210121025
No 116
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.40 E-value=0.04 Score=26.56 Aligned_cols=89 Identities=15% Similarity=0.155 Sum_probs=48.1
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCC----CCEEEEEEECCCCCHHHHHHHHHHHHCCCCHH-------------
Q ss_conf 9329999917985399999999998444267----65499999748607999999999991997212-------------
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKL----FEKVISAHVSRTPQIKKIQEEIAEKMGLRLVE------------- 233 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~----F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~------------- 233 (1003)
.-+++-|+|.+|.||||+|.++......... -...+|++....++..... .....++.+...
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLV-SIAQRFGLDPDDALNNVAYARAYNA 111 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGH-HHHHHTCCCHHHHGGGEEEEECCST
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHH-HHHHHCCCCHHHHHCCEEEEECCCH
T ss_conf 996999983899988999999999863124312689639999402307899998-8897648764553041578722205
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 344899999999982398499999199
Q 001860 234 EIETVRAGRLYERLKVEKKILIILDDI 260 (1003)
Q Consensus 234 ~~~~~~~~~l~~~l~~~kr~LiVlDdv 260 (1003)
....................++++|.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~ds~ 138 (251)
T d1szpa2 112 DHQLRLLDAAAQMMSESRFSLIVVDSV 138 (251)
T ss_dssp TTHHHHHHHTHHHHHHSCEEEEEEETG
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEHHH
T ss_conf 678887878988752046532442035
No 117
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=95.21 E-value=0.0078 Score=30.95 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=30.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 299999179853999999999984442676549999974860799999999999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEK 226 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~ 226 (1003)
-+|+|-|++|.||||.|+.+..+... .++ +...+++.++..
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~lg~---------~~i----stGdl~R~~a~~ 44 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKDFGF---------TYL----DTGAMYRAATYM 44 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHCC---------EEE----EHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCC---------CEE----CHHHHHHHHHHH
T ss_conf 59997899987989999999999699---------478----779999999999
No 118
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=95.15 E-value=0.055 Score=25.65 Aligned_cols=62 Identities=19% Similarity=0.281 Sum_probs=38.7
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC-CCCHHHHHHHHHHHHCCCCH
Q ss_conf 79932999991798539999999999844426765499999748-60799999999999199721
Q 001860 169 NRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSR-TPQIKKIQEEIAEKMGLRLV 232 (1003)
Q Consensus 169 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~-~~~~~~i~~~i~~~l~~~~~ 232 (1003)
.+...||.++|..|+||||.+-.++...+.++ . .+..|+... .....+-++.-.+.++.+..
T Consensus 9 ~k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g-~-kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~ 71 (211)
T d1j8yf2 9 DKIPYVIMLVGVQGTGKATTAGKLAYFYKKKG-F-KVGLVGADVYRPAALEQLQQLGQQIGVPVY 71 (211)
T ss_dssp SSSSEEEEEECSCCC----HHHHHHHHHHHTT-C-CEEEEECCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-C-CEEEEEEECCCCCHHHHHHHHCCCCCCCEE
T ss_conf 99998999989999998999999999999779-9-369997202355156789874014684223
No 119
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.05 E-value=0.0085 Score=30.73 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=22.3
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 93299999179853999999999984
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.-++|.|.|+.|.||||+|+.+.+..
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~~l 28 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALANLP 28 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHTCS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 98599998899998899999999995
No 120
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=94.96 E-value=0.012 Score=29.89 Aligned_cols=27 Identities=19% Similarity=0.329 Sum_probs=22.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9932999991798539999999999844
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.++++| |.|++|.||||.|+.+.++..
T Consensus 2 ~~~rii-l~G~pGSGKsT~a~~La~~~g 28 (190)
T d1ak2a1 2 KGVRAV-LLGPPGAGKGTQAPKLAKNFC 28 (190)
T ss_dssp CCCEEE-EECCTTSSHHHHHHHHHHHHT
T ss_pred CCCEEE-EECCCCCCHHHHHHHHHHHHC
T ss_conf 963899-989999988999999999869
No 121
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=94.92 E-value=0.01 Score=30.26 Aligned_cols=25 Identities=44% Similarity=0.543 Sum_probs=22.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999917985399999999998444
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
.|+|+|..|.|||||++.+......
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCC
T ss_conf 8999989993899999999814888
No 122
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.86 E-value=0.011 Score=29.97 Aligned_cols=25 Identities=28% Similarity=0.239 Sum_probs=22.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.+|.|.|++|.||||.|+.++++..
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g 26 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYG 26 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 3999979999998999999999869
No 123
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.81 E-value=0.0091 Score=30.54 Aligned_cols=25 Identities=28% Similarity=0.421 Sum_probs=21.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
|.|.|+|+.|+||||+++.+.+...
T Consensus 1 rpIvl~GPsGsGK~tl~~~L~~~~~ 25 (190)
T d1lvga_ 1 RPVVLSGPSGAGKSTLLKKLFQEHS 25 (190)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 9199999999999999999997488
No 124
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=94.79 E-value=0.02 Score=28.39 Aligned_cols=46 Identities=20% Similarity=0.305 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 113528999999999707--9932999991798539999999999844
Q 001860 152 HFQSRKCTLKEILDALSN--RKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 152 ~~~gr~~~~~~l~~~l~~--~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+|+|....++++.+.+.. ..-..|-|.|..|.|||++|+.+++...
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~ 48 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSD 48 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHST
T ss_pred CEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 958629999999999999968899789989998179999999999658
No 125
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.68 E-value=0.01 Score=30.27 Aligned_cols=26 Identities=31% Similarity=0.413 Sum_probs=22.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 29999917985399999999998444
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
|.|.|+|+.|+|||||++.+.++...
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~ 27 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPD 27 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 76999899999989999999974886
No 126
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.65 E-value=0.029 Score=27.44 Aligned_cols=39 Identities=28% Similarity=0.334 Sum_probs=30.2
Q ss_pred CEEEEEE-CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 3299999-1798539999999999844426765499999748
Q 001860 172 FNMIGVY-GMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSR 212 (1003)
Q Consensus 172 ~~vi~I~-G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~ 212 (1003)
.|||+|. |-||+||||+|.++....... -..+..|+...
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~--g~~VlliD~D~ 40 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQL--GHDVTIVDADI 40 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHT--TCCEEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHC--CCCEEEEECCC
T ss_conf 97999979999980999999999999968--99899995989
No 127
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=94.64 E-value=0.029 Score=27.43 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=21.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 93299999179853999999999984
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
...-+-..|+.|+|||.+|+.+....
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~~~ 92 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAKHL 92 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHC
T ss_conf 87532441899863789999998644
No 128
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.64 E-value=0.0098 Score=30.34 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=21.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99329999917985399999999998
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
+...+|.++|++|.||||+|++....
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~ 37 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVS 37 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 99989999899999899999999976
No 129
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=94.52 E-value=0.046 Score=26.17 Aligned_cols=44 Identities=18% Similarity=0.070 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHH--CCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 52899999999970--799329999917985399999999998444
Q 001860 155 SRKCTLKEILDALS--NRKFNMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 155 gr~~~~~~l~~~l~--~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
|-++.+.+....+. .+.-+.+.++|++|.|||++|+.+.+....
T Consensus 135 ~~~~~i~~~l~~~~~~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~ 180 (362)
T d1svma_ 135 KMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELCGG 180 (362)
T ss_dssp THHHHHHHHHHHHHHCCTTCCEEEEECSTTSSHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 2589999999999828997676999899998889999999998599
No 130
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.52 E-value=0.074 Score=24.88 Aligned_cols=27 Identities=30% Similarity=0.549 Sum_probs=23.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 999991798539999999999844426
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAKENK 200 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~~~~ 200 (1003)
.|+|-|+.|.||||+++.+.+....++
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~~~g 28 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFRAAG 28 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 899989987899999999999998789
No 131
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.46 E-value=0.082 Score=24.60 Aligned_cols=50 Identities=24% Similarity=0.240 Sum_probs=35.9
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHC----CCCCEEEEEEECCCCCHHHHH
Q ss_conf 93299999179853999999999984442----676549999974860799999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKEN----KLFEKVISAHVSRTPQIKKIQ 220 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~----~~F~~~~wv~vs~~~~~~~i~ 220 (1003)
.-+++-|+|.+|.|||++|.++..+.... ......+|+......+...+.
T Consensus 35 ~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIR 88 (254)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCHHHHHHHH
T ss_conf 887999985898988999999999863448763889628998310125899999
No 132
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=94.31 E-value=0.04 Score=26.53 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=23.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9329999917985399999999998444
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
+..||||.|..|.||||+|+.+.+..+.
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~i~~~ 30 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQIFRR 30 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 8889999899978099999999999715
No 133
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=94.30 E-value=0.091 Score=24.32 Aligned_cols=61 Identities=20% Similarity=0.248 Sum_probs=40.1
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC-CCCHHHHHHHHHHHHCCCCH
Q ss_conf 9932999991798539999999999844426765499999748-60799999999999199721
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSR-TPQIKKIQEEIAEKMGLRLV 232 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~-~~~~~~i~~~i~~~l~~~~~ 232 (1003)
....||.++|+.|+||||-+-.++.+...++ ..+..++... .....+-++...+.++.+..
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~ 70 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEG--KSVVLAAADTFRAAAIEQLKIWGERVGATVI 70 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTT--CCEEEEEECTTCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 9998999989999988999999999999779--9069996013342046788877643276410
No 134
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.07 E-value=0.02 Score=28.46 Aligned_cols=24 Identities=21% Similarity=0.293 Sum_probs=21.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.|.|.|++|.||||+|+.+.++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~ 25 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYG 25 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899988999998999999999879
No 135
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=94.07 E-value=0.023 Score=28.07 Aligned_cols=27 Identities=33% Similarity=0.311 Sum_probs=23.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
..++|.|.|++|.||||+|+.+.++..
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~~~g 33 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQKYG 33 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 782899989999987999999999869
No 136
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.06 E-value=0.023 Score=27.98 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=23.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+.+.|+|-|+-|+||||+++.+.++..
T Consensus 1 ~pk~IviEG~~GsGKST~~~~L~~~l~ 27 (241)
T d2ocpa1 1 GPRRLSIEGNIAVGKSTFVKLLTKTYP 27 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHCT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 981999989988859999999999873
No 137
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=94.02 E-value=0.019 Score=28.60 Aligned_cols=25 Identities=20% Similarity=0.328 Sum_probs=20.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
-.|.|.|++|.||||+|+.+.++..
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g 31 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFE 31 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 1699988999987999999999979
No 138
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.00 E-value=0.022 Score=28.13 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=21.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
++|.|+|+.|+||||+++.+.++..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 4999989999999999999984589
No 139
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=93.98 E-value=0.027 Score=27.62 Aligned_cols=25 Identities=40% Similarity=0.623 Sum_probs=21.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999917985399999999998444
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
||+|.|+.|.|||||..++.++...
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~~ 26 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLED 26 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 8999918998399999999998843
No 140
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.93 E-value=0.022 Score=28.18 Aligned_cols=24 Identities=25% Similarity=0.292 Sum_probs=21.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.|.|.|++|.||||+|+.++++..
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g 25 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLG 25 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899988999997999999999989
No 141
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=93.92 E-value=0.018 Score=28.69 Aligned_cols=23 Identities=30% Similarity=0.394 Sum_probs=19.5
Q ss_pred CCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 93299999179853999999999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVG 193 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~ 193 (1003)
..-+|||.|+.|.||||+|..+-
T Consensus 2 ~p~IIgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 2 HPIIIGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
T ss_conf 99899998988778999999999
No 142
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=93.92 E-value=0.032 Score=27.14 Aligned_cols=71 Identities=18% Similarity=0.287 Sum_probs=41.6
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCE
Q ss_conf 29999917985399999999998444267654999997486079999999999919972123448999999999823984
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEKMGLRLVEEIETVRAGRLYERLKVEKK 252 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~kr 252 (1003)
.++-++|.+|+|||.+|+.+......+..| +-+..+.-.+ ....+. ......+.+..+. .
T Consensus 124 g~~l~~G~pG~GKT~la~ala~~~~~~~~~---~~~~~~~~~~--------------~~~G~~-e~~~~~~f~~a~~--~ 183 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGEALGGKDKY---ATVRFGEPLS--------------GYNTDF-NVFVDDIARAMLQ--H 183 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHHHHHTTSCC---EEEEBSCSST--------------TCBCCH-HHHHHHHHHHHHH--C
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCCE---EEEEHHHHHH--------------CCCCHH-HHHHHHHHHHHHH--C
T ss_conf 638887799850889999999986379980---8978268544--------------244457-8999999999862--6
Q ss_pred EEEEEECCCCC
Q ss_conf 99999199983
Q 001860 253 ILIILDDIWGS 263 (1003)
Q Consensus 253 ~LiVlDdv~~~ 263 (1003)
..|.+|.+...
T Consensus 184 ~ilf~DEid~~ 194 (321)
T d1w44a_ 184 RVIVIDSLKNV 194 (321)
T ss_dssp SEEEEECCTTT
T ss_pred CEEEEEHHHHH
T ss_conf 58974101222
No 143
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=93.90 E-value=0.022 Score=28.17 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=21.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.|.|.|+.|.||||+|+.+.++..
T Consensus 5 ~I~i~GppGsGKsT~a~~La~~~~ 28 (189)
T d1zaka1 5 KVMISGAPASGKGTQCELIKTKYQ 28 (189)
T ss_dssp CEEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 999988999998999999999879
No 144
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.89 E-value=0.032 Score=27.11 Aligned_cols=43 Identities=23% Similarity=0.361 Sum_probs=30.5
Q ss_pred CEEEEEE-CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEC-CCCCH
Q ss_conf 3299999-179853999999999984442676549999974-86079
Q 001860 172 FNMIGVY-GMGGVGKTTLVKEVGRKAKENKLFEKVISAHVS-RTPQI 216 (1003)
Q Consensus 172 ~~vi~I~-G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs-~~~~~ 216 (1003)
.+||+|+ +-||+||||+|.++......+ -..++-++.. +.++.
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~--g~~VlliD~D~~~~~l 46 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDR--GRKVLAVDGDLTMANL 46 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHT--TCCEEEEECCTTSCCH
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCCCH
T ss_conf 82999989999881999999999999968--9989999498999974
No 145
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.84 E-value=0.078 Score=24.72 Aligned_cols=29 Identities=28% Similarity=0.326 Sum_probs=24.3
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 93299999179853999999999984442
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
+-+.|+|-|+.|.||||+++.+.+..+.+
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~~~ 30 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQPN 30 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTTTS
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 76899998998886999999999999719
No 146
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.83 E-value=0.023 Score=28.05 Aligned_cols=26 Identities=19% Similarity=0.287 Sum_probs=22.5
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 32999991798539999999999844
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.+.|.|+|+.|+|||||++++..+..
T Consensus 3 ~k~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 77199999899999999999997097
No 147
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=93.77 E-value=0.027 Score=27.60 Aligned_cols=24 Identities=29% Similarity=0.353 Sum_probs=21.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.|.|.|++|.||||+|+.++++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g 25 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYG 25 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899988999987999999999879
No 148
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=93.71 E-value=0.12 Score=23.63 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=54.8
Q ss_pred HHHHHHHC-CCCEEEEEECCCCCHHHHHHHHHHHHHHHCC-CC-----CEEEEEEECCCCC-HHHHHHHHHHHHCCC---
Q ss_conf 99999707-9932999991798539999999999844426-76-----5499999748607-999999999991997---
Q 001860 162 EILDALSN-RKFNMIGVYGMGGVGKTTLVKEVGRKAKENK-LF-----EKVISAHVSRTPQ-IKKIQEEIAEKMGLR--- 230 (1003)
Q Consensus 162 ~l~~~l~~-~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~-~F-----~~~~wv~vs~~~~-~~~i~~~i~~~l~~~--- 230 (1003)
+.++.+.- ..-..++|.|..|+|||+++..+........ .. ..++++-+.+... ..++.......-...
T Consensus 57 raID~l~pig~GQr~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~~~IGer~~E~~e~~~~~~~~~~~~~tv 136 (285)
T d2jdia3 57 KAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTI 136 (285)
T ss_dssp HHHHHHSCCBTTCBCEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEEEEESCCHHHHHHHHHHHHHTTCGGGEE
T ss_pred EEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCEE
T ss_conf 57743467667877876568888858999999975776415654456328999630763878999999861456120049
Q ss_pred ----CHHHH------HHHHHHHHHHHHH-CCCEEEEEEECC
Q ss_conf ----21234------4899999999982-398499999199
Q 001860 231 ----LVEEI------ETVRAGRLYERLK-VEKKILIILDDI 260 (1003)
Q Consensus 231 ----~~~~~------~~~~~~~l~~~l~-~~kr~LiVlDdv 260 (1003)
..++. .....-.+.+++. ++|+.|+++||+
T Consensus 137 vv~~ts~~~~~~r~~~~~~a~tiAEyfrd~G~~VLll~Dsl 177 (285)
T d2jdia3 137 VVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDL 177 (285)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEETH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH
T ss_conf 99978999999999999999999999997699679997172
No 149
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.61 E-value=0.12 Score=23.62 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=26.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 299999179853999999999984442676549999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISA 208 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv 208 (1003)
+.|+|-|..|.||||+++.+.+.....+ +..+.+.
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~~~g-~~~~~~~ 37 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLEQLG-IRDMVFT 37 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEEE
T ss_conf 7899989988879999999999999679-9739983
No 150
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=93.35 E-value=0.018 Score=28.70 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=22.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 993299999179853999999999984
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.+.-+|+|-|.-|+||||+++.+.+..
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 986199988999988899999999870
No 151
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=93.17 E-value=0.05 Score=25.93 Aligned_cols=27 Identities=30% Similarity=0.181 Sum_probs=22.7
Q ss_pred EEEEEECCC-CCHHHHHHHHHHHHHHHC
Q ss_conf 299999179-853999999999984442
Q 001860 173 NMIGVYGMG-GVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 173 ~vi~I~G~g-GiGKTtLa~~v~~~~~~~ 199 (1003)
+.+-|.|.| |+||||++-.+......+
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~ 29 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAA 29 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 5199998999942999999999999977
No 152
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.16 E-value=0.014 Score=29.46 Aligned_cols=26 Identities=23% Similarity=0.319 Sum_probs=22.7
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 32999991798539999999999844
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.+.|+|-|+.|.||||+|+.+.+...
T Consensus 2 ~k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 98899987888779999999999973
No 153
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.02 E-value=0.037 Score=26.72 Aligned_cols=24 Identities=25% Similarity=0.112 Sum_probs=20.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.|.|.|++|.||||.|+.++++..
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~ 25 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYG 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899987999998999999999869
No 154
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.00 E-value=0.042 Score=26.40 Aligned_cols=25 Identities=24% Similarity=0.333 Sum_probs=20.6
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 32999991798539999999999844
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.++ .|.|++|.||||+|+.+.++..
T Consensus 3 mrI-vl~G~pGSGKtT~a~~La~~~g 27 (180)
T d1akya1 3 IRM-VLIGPPGAGKGTQAPNLQERFH 27 (180)
T ss_dssp CEE-EEECCTTSSHHHHHHHHHHHHC
T ss_pred EEE-EEECCCCCCHHHHHHHHHHHHC
T ss_conf 699-9989999998999999999969
No 155
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.79 E-value=0.044 Score=26.25 Aligned_cols=25 Identities=20% Similarity=0.343 Sum_probs=21.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
++|.|+|+.|+|||||.+.+..+..
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 0999999999999999999986398
No 156
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.44 E-value=0.18 Score=22.46 Aligned_cols=49 Identities=18% Similarity=0.152 Sum_probs=35.8
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHH----CCCCCEEEEEEECCCCCHHHH
Q ss_conf 9329999917985399999999998444----267654999997486079999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKE----NKLFEKVISAHVSRTPQIKKI 219 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~----~~~F~~~~wv~vs~~~~~~~i 219 (1003)
.-+++-|+|.+|.|||++|.++...... ...+..+.|+.....+.....
T Consensus 36 ~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (258)
T d1v5wa_ 36 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRL 88 (258)
T ss_dssp SSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHH
T ss_conf 89799998899887889999999999744431666624887401777789999
No 157
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=91.96 E-value=0.19 Score=22.37 Aligned_cols=64 Identities=17% Similarity=0.062 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEEECCCCCHHHHHHHH
Q ss_conf 899999999970799329999917985399999999998444267-6549999974860799999999
Q 001860 157 KCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKL-FEKVISAHVSRTPQIKKIQEEI 223 (1003)
Q Consensus 157 ~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~-F~~~~wv~vs~~~~~~~i~~~i 223 (1003)
++.+..+...+. -++..|.|.+|.||||.+..+......... -...+.+.....-....+...+
T Consensus 151 ~~Q~~A~~~al~---~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~ 215 (359)
T d1w36d1 151 NWQKVAAAVALT---RRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESL 215 (359)
T ss_dssp CHHHHHHHHHHT---BSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHC---CCEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
T ss_conf 389999999970---88599976898875216999999999987526982898437599999999888
No 158
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=91.74 E-value=0.12 Score=23.54 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=25.0
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99999970799329999917985399999999998
Q 001860 161 KEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 161 ~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
..+..++..... .|.|+|.+|+|||||..++...
T Consensus 5 ~~~~~~~~~k~~-kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 5 TRIWRLFNHQEH-KVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp HHHHHHHTTSCE-EEEEEESTTSSHHHHHHHHHTT
T ss_pred HHHHHHHCCCEE-EEEEECCCCCCHHHHHHHHHCC
T ss_conf 999977289857-9999999998989999999668
No 159
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.72 E-value=0.063 Score=25.32 Aligned_cols=28 Identities=29% Similarity=0.383 Sum_probs=23.0
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9932999991798539999999999844
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
..-.+++|+|..|.|||||++.+..-..
T Consensus 60 ~~Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 60 EKGEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 5999999998999829999999957974
No 160
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=91.43 E-value=0.071 Score=25.00 Aligned_cols=27 Identities=19% Similarity=0.375 Sum_probs=22.8
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 799329999917985399999999998
Q 001860 169 NRKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 169 ~~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
++++..|+|+|..|+|||||...+.+.
T Consensus 20 ~~~~~~I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 20 EGGLPEIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp CSCCCEEEEEEBTTSSHHHHHHHHHTC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHCCC
T ss_conf 889989999899998799999985298
No 161
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=91.41 E-value=0.065 Score=25.23 Aligned_cols=27 Identities=22% Similarity=0.316 Sum_probs=22.2
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|+|..|.|||||++.+..-.+
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~gl~~ 66 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITRFYD 66 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 999999999999859999999862168
No 162
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=91.41 E-value=0.065 Score=25.24 Aligned_cols=19 Identities=26% Similarity=0.471 Sum_probs=17.5
Q ss_pred EEEEECCCCCHHHHHHHHH
Q ss_conf 9999917985399999999
Q 001860 174 MIGVYGMGGVGKTTLVKEV 192 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v 192 (1003)
+|||+|+-|.||||.|+.+
T Consensus 5 iIgitG~igSGKStv~~~l 23 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAF 23 (208)
T ss_dssp EEEEECCTTSCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
T ss_conf 9997898868899999999
No 163
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=91.30 E-value=0.078 Score=24.74 Aligned_cols=23 Identities=26% Similarity=0.355 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.|+|.+|+|||||..++..+.
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999989899999996598
No 164
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=91.26 E-value=0.13 Score=23.40 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=23.0
Q ss_pred HHHHHH-CCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 999970-799329999917985399999999998
Q 001860 163 ILDALS-NRKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 163 l~~~l~-~~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
+.+.+. .++...|.++|.+|+|||||..++...
T Consensus 3 ~~~~~~~~~k~~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 3 VLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp HHHHHTCTTCCEEEEEEEETTSSHHHHHHHHSCC
T ss_pred HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 6775553477778999999998989999999678
No 165
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=91.25 E-value=0.076 Score=24.80 Aligned_cols=27 Identities=22% Similarity=0.329 Sum_probs=22.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|+|..|.||||+++.++.-.+
T Consensus 28 ~Ge~~~liG~sGaGKSTll~~i~gl~~ 54 (240)
T d1g2912 28 DGEFMILLGPSGCGKTTTLRMIAGLEE 54 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 998999999999809999999964878
No 166
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=91.25 E-value=0.07 Score=25.01 Aligned_cols=27 Identities=37% Similarity=0.491 Sum_probs=22.2
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-..++|+|..|.|||||++.+..-..
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 999999999999989999999973578
No 167
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=91.16 E-value=0.072 Score=24.95 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=25.1
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 93299999179853999999999984442676549999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISA 208 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv 208 (1003)
.-.+++|+|..|.|||||++.+..-.+ .-.+.+++
T Consensus 27 ~GEi~~iiG~sGsGKSTLl~~i~Gl~~---p~~G~I~~ 61 (258)
T d1b0ua_ 27 AGDVISIIGSSGSGKSTFLRCINFLEK---PSEGAIIV 61 (258)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC---CSEEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC---CCCCCEEE
T ss_conf 997999998999829999999974766---78997799
No 168
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.95 E-value=0.071 Score=24.98 Aligned_cols=22 Identities=32% Similarity=0.401 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.|+|.+|+|||+|+.++.++
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999993999999999629
No 169
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=90.86 E-value=0.1 Score=23.97 Aligned_cols=24 Identities=21% Similarity=0.184 Sum_probs=21.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 299999179853999999999984
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
++|||.|.-|.||+|+|+.+.+..
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 899997999988999999999868
No 170
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=90.85 E-value=0.074 Score=24.87 Aligned_cols=24 Identities=29% Similarity=0.430 Sum_probs=20.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.|+|+|.+|+|||||..++.+...
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~~~ 30 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVGEV 30 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 999999999899999999967987
No 171
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.82 E-value=0.082 Score=24.60 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=22.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9932999991798539999999999844
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
..-.+++|+|..|.|||||++.+..-.+
T Consensus 38 ~~Ge~vaivG~sGsGKSTLl~li~gl~~ 65 (251)
T d1jj7a_ 38 RPGEVTALVGPNGSGKSTVAALLQNLYQ 65 (251)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 4998999999999849999999861437
No 172
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.81 E-value=0.074 Score=24.86 Aligned_cols=23 Identities=35% Similarity=0.270 Sum_probs=20.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|.+|+|||+|..++.+..
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~~ 26 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAGR 26 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999929899999997399
No 173
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=90.80 E-value=0.088 Score=24.41 Aligned_cols=27 Identities=26% Similarity=0.319 Sum_probs=22.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 993299999179853999999999984
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
..-..++|+|..|.|||||++.+..-.
T Consensus 26 ~~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 26 QPNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 599999999999997999999999960
No 174
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.80 E-value=0.075 Score=24.82 Aligned_cols=23 Identities=30% Similarity=0.392 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.|+|.+|+|||+|+.++.+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~~~ 28 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEKK 28 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999949899999997299
No 175
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.71 E-value=0.28 Score=21.32 Aligned_cols=49 Identities=12% Similarity=0.076 Sum_probs=32.0
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCC----CCEEEEEEECCCCCHHHHH
Q ss_conf 329999917985399999999998444267----6549999974860799999
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKENKL----FEKVISAHVSRTPQIKKIQ 220 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~----F~~~~wv~vs~~~~~~~i~ 220 (1003)
-+++-|.|.+|.|||++|.++..+...... +....++..........+.
T Consensus 23 G~v~~i~G~~GsGKT~l~l~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (242)
T d1n0wa_ 23 GSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLL 75 (242)
T ss_dssp TSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSCCCHHHHH
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
T ss_conf 97999995899999999999999998862446655201003556655899999
No 176
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=90.64 E-value=0.28 Score=21.28 Aligned_cols=31 Identities=29% Similarity=0.266 Sum_probs=26.0
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 9932999991798539999999999844426
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAKENK 200 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~ 200 (1003)
..-.+|.+.|.=|.||||+++.+.+...+..
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~~ 61 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQG 61 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCCS
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf 9982999966877658899999876422346
No 177
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=90.64 E-value=0.086 Score=24.48 Aligned_cols=20 Identities=35% Similarity=0.512 Sum_probs=18.1
Q ss_pred EEEEEECCCCCHHHHHHHHH
Q ss_conf 29999917985399999999
Q 001860 173 NMIGVYGMGGVGKTTLVKEV 192 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v 192 (1003)
-+|||.|.-|.||||+|+.+
T Consensus 3 ~iIgITG~igSGKStv~~~l 22 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLF 22 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
T ss_conf 89998888878899999999
No 178
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=90.53 E-value=0.14 Score=23.15 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=21.7
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 29999917985399999999998444
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
.+..|+|.+|+||||+|.+++-....
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~ia~ 55 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQIAG 55 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 58999928999899999999999976
No 179
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.44 E-value=0.11 Score=23.91 Aligned_cols=24 Identities=29% Similarity=0.429 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.|.++|-+|+|||++..++-...-
T Consensus 4 KivllG~~~vGKTsl~~r~~~~~~ 27 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIHE 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 999999999888999998840897
No 180
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.40 E-value=0.099 Score=24.10 Aligned_cols=22 Identities=27% Similarity=0.517 Sum_probs=19.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|.+|+|||||..++.+.
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999998995989999999829
No 181
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=90.40 E-value=0.081 Score=24.65 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=24.9
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 93299999179853999999999984442676549999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISA 208 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv 208 (1003)
.-.+++|+|..|.|||||.+.+..-.+. -.+.+++
T Consensus 30 ~Ge~~~iiG~sGsGKSTLl~~i~gl~~p---~sG~I~~ 64 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKSTMLNIIGCLDKP---TEGEVYI 64 (230)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSCC---SEEEEEE
T ss_pred CCCEEEEECCCCCCCCHHHHHCCCCCCC---CCCEEEE
T ss_conf 9979999889999821655750688777---7662699
No 182
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=90.32 E-value=0.082 Score=24.61 Aligned_cols=27 Identities=33% Similarity=0.519 Sum_probs=22.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|.|..|.|||||++.++--.+
T Consensus 30 ~Ge~~~iiG~sGsGKSTLl~~i~Gl~~ 56 (240)
T d3dhwc1 30 AGQIYGVIGASGAGKSTLIRCVNLLER 56 (240)
T ss_dssp SSCEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 997999989998988899998758863
No 183
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=90.19 E-value=0.12 Score=23.50 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=23.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 99329999917985399999999998444
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
+++|-|+|+|.+|.|||||+.++......
T Consensus 4 ~~iRni~i~gh~~~GKTtL~e~ll~~~g~ 32 (276)
T d2bv3a2 4 KRLRNIGIAAHIDAGKTTTTERILYYTGR 32 (276)
T ss_dssp GGEEEEEEEECTTSCHHHHHHHHHHHHTS
T ss_pred HHCEEEEEEECCCCCHHHHHHHHHHHCCC
T ss_conf 02029999958989989999999996485
No 184
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.19 E-value=0.091 Score=24.32 Aligned_cols=23 Identities=26% Similarity=0.340 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|.+|+|||+|+.++.+..
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~~~ 24 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMYDS 24 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 89999989909899999998499
No 185
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.17 E-value=0.11 Score=23.85 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=25.3
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 93299999179853999999999984442676549999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISA 208 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv 208 (1003)
.-.+++|.|..|.|||||.+.+.--.+. -.+.+++
T Consensus 25 ~Gei~~liGpsGsGKSTLl~~i~Gl~~p---~sG~I~i 59 (232)
T d2awna2 25 EGEFVVFVGPSGCGKSTLLRMIAGLETI---TSGDLFI 59 (232)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC---SEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCC---CCCEEEE
T ss_conf 9989999989998299999999658788---8888999
No 186
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=90.10 E-value=0.31 Score=20.99 Aligned_cols=41 Identities=22% Similarity=0.031 Sum_probs=26.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHH-HHHCCCCCEEEEEEECCC
Q ss_conf 9329999917985399999999998-444267654999997486
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRK-AKENKLFEKVISAHVSRT 213 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~-~~~~~~F~~~~wv~vs~~ 213 (1003)
.-.++-|+|..|.|||++|.++... .... -...+|++....
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~~--~~~~~~~s~e~~ 66 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIEF--DEPGVFVTFEET 66 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHHH--CCCEEEEESSSC
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHC--CCCCCCCCCCCC
T ss_conf 983999994799999999999999999856--887420126679
No 187
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.07 E-value=0.11 Score=23.90 Aligned_cols=22 Identities=36% Similarity=0.462 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.|+|.+|+|||+|..++.+.
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999993989999999829
No 188
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=90.06 E-value=0.11 Score=23.76 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|+|..|.|||||.+.+..-.+
T Consensus 31 ~Ge~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 31 DGEFLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 998999999999829999999975899
No 189
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=90.05 E-value=0.068 Score=25.09 Aligned_cols=27 Identities=41% Similarity=0.568 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|+|.-|.|||||.+.+..-.+
T Consensus 26 ~Gei~~l~G~NGsGKSTLl~~i~gl~~ 52 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTTLLKTISTYLK 52 (200)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 998999999999719999999966205
No 190
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.03 E-value=0.096 Score=24.17 Aligned_cols=22 Identities=27% Similarity=0.357 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|.+|+|||||..++.+.
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999991989999999739
No 191
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=90.01 E-value=0.11 Score=23.72 Aligned_cols=26 Identities=31% Similarity=0.469 Sum_probs=22.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 29999917985399999999998444
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
+=|-++|+.|+|||.||+.++....+
T Consensus 50 sNILliGPTGvGKTlLAr~LAk~l~V 75 (443)
T d1g41a_ 50 KNILMIGPTGVGKTEIARRLAKLANA 75 (443)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHTTC
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 64799899998899999999987389
No 192
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.99 E-value=0.096 Score=24.16 Aligned_cols=23 Identities=22% Similarity=0.391 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.|+|-+|+|||+|..++.++.
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~~ 28 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVEDS 28 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 89999989949999999997398
No 193
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.96 E-value=0.097 Score=24.14 Aligned_cols=24 Identities=38% Similarity=0.455 Sum_probs=20.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 299999179853999999999984
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-.|.++|.+|+|||+|..++.+..
T Consensus 6 ~Ki~lvG~~~vGKTsLi~~l~~~~ 29 (171)
T d2ew1a1 6 FKIVLIGNAGVGKTCLVRRFTQGL 29 (171)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 999999999919899999997299
No 194
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.94 E-value=0.11 Score=23.72 Aligned_cols=23 Identities=26% Similarity=0.371 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|..|+|||+|+.++.+..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999949899999998598
No 195
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=89.94 E-value=0.13 Score=23.35 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=23.0
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 3299999179853999999999984442
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKEN 199 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 199 (1003)
+-.|.|-|.-|+||||+++.+.+....+
T Consensus 6 ~~rI~iEG~iGsGKSTl~~~L~~~l~~~ 33 (333)
T d1p6xa_ 6 IVRIYLDGVYGIGKSTTGRVMASAASGG 33 (333)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHSGGGCS
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 5899998886678999999999986569
No 196
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=89.84 E-value=0.11 Score=23.81 Aligned_cols=27 Identities=19% Similarity=0.202 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|.|..|.||||+.+.+..-..
T Consensus 25 ~Ge~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 25 SGEYFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp TTCEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 998999998999829999999964768
No 197
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.84 E-value=0.12 Score=23.56 Aligned_cols=24 Identities=25% Similarity=0.368 Sum_probs=19.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 299999179853999999999984
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
+.|.|+|..|+|||+|..++.+..
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 799999989938899999997199
No 198
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=89.82 E-value=0.33 Score=20.85 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=34.9
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCC--------------CCEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 329999917985399999999998444267--------------65499999748607999999999991
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAKENKL--------------FEKVISAHVSRTPQIKKIQEEIAEKM 227 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~--------------F~~~~wv~vs~~~~~~~i~~~i~~~l 227 (1003)
-.++-|.|.+|.|||++|.++..+...... ...+.|+.....+....+ +.+....
T Consensus 34 G~l~~i~G~~G~GKT~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~~~~~~~-~~~~~~~ 102 (258)
T d2i1qa2 34 QSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERI-MQMAEHA 102 (258)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHHTTCGGGEECCTTTSCTTTTSSEEEEEEESSSCCCHHHH-HHHHHHH
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHCCCEEEEEEECCCCCHHHH-HHHHHHC
T ss_conf 85999991799998999999999998537974377530031003851999995687688999-9888522
No 199
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.82 E-value=0.12 Score=23.68 Aligned_cols=23 Identities=35% Similarity=0.494 Sum_probs=19.7
Q ss_pred EEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 29999917985399999999998
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-.|.|+|.+|+|||+|..++.+.
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 79999997996989999999739
No 200
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.80 E-value=0.12 Score=23.64 Aligned_cols=23 Identities=26% Similarity=0.423 Sum_probs=20.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.|+|.+|+|||||..++.+..
T Consensus 8 KivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999909899999996198
No 201
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.78 E-value=0.1 Score=23.99 Aligned_cols=23 Identities=35% Similarity=0.603 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|.+|+|||+|..++.+..
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989978999999997398
No 202
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.76 E-value=0.1 Score=23.98 Aligned_cols=22 Identities=32% Similarity=0.418 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|.+|+|||+|+.++...
T Consensus 7 KI~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990999999999709
No 203
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.75 E-value=0.12 Score=23.64 Aligned_cols=24 Identities=25% Similarity=0.354 Sum_probs=20.4
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 329999917985399999999998
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
...|.|+|..|+|||+|..++.+.
T Consensus 4 ~~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 4 SRKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 338999998992989999999719
No 204
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.71 E-value=0.095 Score=24.20 Aligned_cols=22 Identities=32% Similarity=0.507 Sum_probs=18.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|..|+|||+|+.++.+.
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999898993999999998188
No 205
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.70 E-value=0.1 Score=23.93 Aligned_cols=23 Identities=35% Similarity=0.517 Sum_probs=20.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|-+|+|||+|..++.++.
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989939999999997199
No 206
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.67 E-value=0.096 Score=24.16 Aligned_cols=22 Identities=41% Similarity=0.755 Sum_probs=18.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|.+|+|||||..++.++
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998997989999999709
No 207
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=89.54 E-value=0.13 Score=23.36 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=24.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 299999179853999999999984442676549999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISA 208 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv 208 (1003)
.+++|.|..|.|||||.+.+..-.+. -.+.+|+
T Consensus 25 e~~~liGpnGaGKSTll~~i~Gl~~p---~~G~I~~ 57 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAGIVKP---DRGEVRL 57 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSSCC---SEEEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHCCCCC---CCEEEEE
T ss_conf 79999979998099999999739998---9628999
No 208
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.47 E-value=0.11 Score=23.79 Aligned_cols=23 Identities=39% Similarity=0.430 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.|+|.+|+|||+|..++.++.
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999989999999996499
No 209
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.41 E-value=0.11 Score=23.69 Aligned_cols=23 Identities=39% Similarity=0.394 Sum_probs=20.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.|+|.+|+|||+|..++.++.
T Consensus 7 KivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999979999999997498
No 210
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.41 E-value=0.13 Score=23.31 Aligned_cols=23 Identities=35% Similarity=0.517 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-|.++|..|+|||+|..++.+..
T Consensus 5 KivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999989989999999997098
No 211
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.34 E-value=0.13 Score=23.30 Aligned_cols=22 Identities=32% Similarity=0.400 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|.+|+|||||..++.+.
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999996789999999868
No 212
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.30 E-value=0.12 Score=23.63 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=19.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|.+|+|||||..++.+.
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999996989999999709
No 213
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.28 E-value=0.095 Score=24.20 Aligned_cols=22 Identities=32% Similarity=0.400 Sum_probs=19.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.|+|-+|+|||||+.++.+.
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999991989999999619
No 214
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=89.25 E-value=0.12 Score=23.62 Aligned_cols=22 Identities=27% Similarity=0.498 Sum_probs=18.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.|+|.+|+|||||...+.+.
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHCCC
T ss_conf 9999999998999999998089
No 215
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.25 E-value=0.15 Score=22.90 Aligned_cols=24 Identities=21% Similarity=0.189 Sum_probs=20.6
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 299999179853999999999984
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
|-|.|+|.+|+|||||..++....
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 989999999989899999998099
No 216
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.17 E-value=0.12 Score=23.57 Aligned_cols=23 Identities=35% Similarity=0.440 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|.+|+|||+|..++.++.
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~~ 29 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQSY 29 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 89999999979999999997399
No 217
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.13 E-value=0.12 Score=23.53 Aligned_cols=20 Identities=35% Similarity=0.564 Sum_probs=17.8
Q ss_pred EEEEECCCCCHHHHHHHHHH
Q ss_conf 99999179853999999999
Q 001860 174 MIGVYGMGGVGKTTLVKEVG 193 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~ 193 (1003)
.|.++|.+|+|||+|..++.
T Consensus 4 KivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99999899999899999884
No 218
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=89.01 E-value=0.13 Score=23.33 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=21.9
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9329999917985399999999998
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
....|+|+|..|+|||||..++.+.
T Consensus 4 ~~~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 4 YSGFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 4769999999999999999999688
No 219
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=88.93 E-value=0.13 Score=23.42 Aligned_cols=23 Identities=35% Similarity=0.527 Sum_probs=19.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 29999917985399999999998
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-.|.++|.+|+|||||..++...
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCCS
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 79999999998999999999648
No 220
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.87 E-value=0.15 Score=22.94 Aligned_cols=23 Identities=30% Similarity=0.479 Sum_probs=19.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 29999917985399999999998
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-.|.|+|..|+|||||+.++.+.
T Consensus 5 ~Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 5 FKVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 89999999990989999999829
No 221
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.84 E-value=0.16 Score=22.75 Aligned_cols=22 Identities=27% Similarity=0.448 Sum_probs=19.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-|.++|-+|+|||+|..++...
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999999889999999679
No 222
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.79 E-value=0.15 Score=22.88 Aligned_cols=23 Identities=35% Similarity=0.424 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.|+|.+|+|||+|+.++.+..
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~~ 30 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDGA 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999929999999997199
No 223
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.79 E-value=0.14 Score=23.25 Aligned_cols=23 Identities=22% Similarity=0.339 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|..|+|||+|..++.+..
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~~ 27 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999919899999997299
No 224
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=88.61 E-value=0.15 Score=22.91 Aligned_cols=26 Identities=27% Similarity=0.402 Sum_probs=22.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99329999917985399999999998
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
+.+.|..|.|.-|.||||+.+++.+.
T Consensus 1 ~~iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 1 NPIAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp CCEEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 99788998648889999999999856
No 225
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.58 E-value=0.14 Score=23.22 Aligned_cols=23 Identities=35% Similarity=0.540 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|-+|+|||+|..++.++.
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999979989999999998098
No 226
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.40 E-value=0.17 Score=22.65 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|..|+|||+|.+++.+..
T Consensus 4 KivliG~~~vGKTsli~r~~~~~ 26 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKDC 26 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999959899999997299
No 227
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=88.35 E-value=0.16 Score=22.74 Aligned_cols=27 Identities=30% Similarity=0.474 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|+|.-|.|||||.+.+..-.+
T Consensus 27 ~Gei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 27 EGEIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 897999999999999999999966988
No 228
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=88.32 E-value=0.13 Score=23.42 Aligned_cols=27 Identities=26% Similarity=0.417 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|.|..|.||||+.+.+..-.+
T Consensus 30 ~Ge~~~iiG~sGsGKSTll~~i~gl~~ 56 (242)
T d1oxxk2 30 NGERFGILGPSGAGKTTFMRIIAGLDV 56 (242)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 998999998999809999999975868
No 229
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=88.27 E-value=0.32 Score=20.94 Aligned_cols=33 Identities=24% Similarity=0.544 Sum_probs=24.8
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 999999970799329999917985399999999998
Q 001860 160 LKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 160 ~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
++++..++.. +...++|..|+|||||..++..+
T Consensus 86 ~~~L~~~l~~---kt~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 86 IEELKEYLKG---KISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp HHHHHHHHSS---SEEEEECSTTSSHHHHHHHHSTT
T ss_pred HHHHHHHHCC---CEEEEECCCCCCHHHHHHHHCCH
T ss_conf 7669999569---80899788987788887730535
No 230
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=88.24 E-value=0.25 Score=21.62 Aligned_cols=24 Identities=33% Similarity=0.490 Sum_probs=20.8
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 329999917985399999999998
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
+|-|+|+|..|.|||||+.++...
T Consensus 2 iRNv~iiGh~~~GKTtL~e~ll~~ 25 (267)
T d2dy1a2 2 IRTVALVGHAGSGKTTLTEALLYK 25 (267)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 509999948898099999999997
No 231
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=88.17 E-value=0.15 Score=23.02 Aligned_cols=27 Identities=30% Similarity=0.358 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|.|.-|.|||||++.+.--.+
T Consensus 29 ~Gei~~liG~nGaGKSTLl~~i~Gl~~ 55 (254)
T d1g6ha_ 29 KGDVTLIIGPNGSGKSTLINVITGFLK 55 (254)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 997999999999849999999977976
No 232
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=88.15 E-value=0.18 Score=22.48 Aligned_cols=22 Identities=36% Similarity=0.536 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|-.|+|||||+..+.+.
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999991989999999719
No 233
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.10 E-value=0.16 Score=22.83 Aligned_cols=23 Identities=35% Similarity=0.354 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-|.++|..|+|||+|..++.+..
T Consensus 5 KvvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999969999999997199
No 234
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=88.02 E-value=0.21 Score=22.08 Aligned_cols=24 Identities=29% Similarity=0.407 Sum_probs=20.0
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 329999917985399999999998
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
...|.+.|.+|+|||||.+++...
T Consensus 6 ~~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 6 THRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 477999989999889999989509
No 235
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=88.01 E-value=0.12 Score=23.51 Aligned_cols=21 Identities=29% Similarity=0.615 Sum_probs=18.8
Q ss_pred EEEECCCCCHHHHHHHHHHHH
Q ss_conf 999917985399999999998
Q 001860 175 IGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 175 i~I~G~gGiGKTtLa~~v~~~ 195 (1003)
|+|+|..|+|||||...+.+.
T Consensus 4 VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCSS
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999899999899999999689
No 236
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.01 E-value=0.17 Score=22.61 Aligned_cols=22 Identities=32% Similarity=0.406 Sum_probs=18.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|.+|+|||+|...+...
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999998992999999999728
No 237
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=88.00 E-value=0.19 Score=22.31 Aligned_cols=22 Identities=32% Similarity=0.478 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|+|.|..|+|||||..++...
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999899999999677
No 238
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=87.91 E-value=0.18 Score=22.44 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.-.+++|.|.-|.|||||.+.+..-.+
T Consensus 31 ~Gei~~liGpnGaGKSTl~~~i~Gl~~ 57 (240)
T d1ji0a_ 31 RGQIVTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 997999999999859999999967888
No 239
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.85 E-value=0.22 Score=21.98 Aligned_cols=23 Identities=26% Similarity=0.271 Sum_probs=20.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 29999917985399999999998
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
..|+|+|.+|+|||||..++.+.
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 89999999998899999999679
No 240
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.83 E-value=0.19 Score=22.27 Aligned_cols=23 Identities=30% Similarity=0.469 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|.++|.+|+|||+|..++.+..
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~~~ 31 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTDDT 31 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 89999989908899999997199
No 241
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=87.77 E-value=0.22 Score=21.96 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=20.7
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 3299999179853999999999984
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
+-.|.++|-+|+|||+|..++.+..
T Consensus 4 ~~KivlvG~~~vGKTsli~~~~~~~ 28 (168)
T d1u8za_ 4 LHKVIMVGSGGVGKSALTLQFMYDE 28 (168)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 2699999989958899999997299
No 242
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.57 E-value=0.21 Score=22.03 Aligned_cols=23 Identities=26% Similarity=0.430 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-|.++|.+|+|||+|..++.+..
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989978999999997197
No 243
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.46 E-value=0.2 Score=22.23 Aligned_cols=25 Identities=28% Similarity=0.430 Sum_probs=21.8
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9329999917985399999999998
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
....|+|+|-.|+|||||..++.+.
T Consensus 4 ~~~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 4 YCGFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEEEECSSSSSHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 3619999979999899999999589
No 244
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.28 E-value=0.19 Score=22.34 Aligned_cols=23 Identities=39% Similarity=0.507 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-|.++|-.|+|||+|..++.++.
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989959899999997098
No 245
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=87.17 E-value=0.14 Score=23.06 Aligned_cols=27 Identities=33% Similarity=0.439 Sum_probs=21.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 993299999179853999999999984
Q 001860 170 RKFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 170 ~~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
..-..++|+|..|.|||||++.+..-.
T Consensus 42 ~~Ge~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 42 EKGETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp CTTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 399899998899980999999997127
No 246
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.89 E-value=0.24 Score=21.75 Aligned_cols=22 Identities=32% Similarity=0.531 Sum_probs=19.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|-+|+|||||..++.+.
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999997999999999849
No 247
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=86.75 E-value=0.24 Score=21.65 Aligned_cols=22 Identities=27% Similarity=0.383 Sum_probs=18.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-|.++|.+|+|||||..++...
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999998989999999719
No 248
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.70 E-value=0.27 Score=21.33 Aligned_cols=22 Identities=27% Similarity=0.422 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|.++|.+|+|||||...+.+.
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999999999999589
No 249
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=86.11 E-value=0.37 Score=20.50 Aligned_cols=26 Identities=27% Similarity=0.473 Sum_probs=20.6
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 799329999917985399999999998
Q 001860 169 NRKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 169 ~~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.+.++ |.++|.+|+|||||..++.+.
T Consensus 10 ~k~~k-IvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 10 NKEMR-ILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp TCCEE-EEEEEETTSSHHHHHHHTTCC
T ss_pred CCEEE-EEEECCCCCCHHHHHHHHHCC
T ss_conf 97479-999999998789999998448
No 250
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.60 E-value=0.12 Score=23.53 Aligned_cols=23 Identities=39% Similarity=0.460 Sum_probs=19.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-|.++|..|+|||+|..++.+..
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~~ 27 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTGE 27 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC---
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999908899999998498
No 251
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=85.48 E-value=0.22 Score=21.97 Aligned_cols=26 Identities=23% Similarity=0.211 Sum_probs=21.3
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 32999991798539999999999844
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+..|+|=|.-|+||||+++.+.+...
T Consensus 4 ~lrI~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 4 LLRVYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEEEEECSCTTSSHHHHHHHHTC---
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 42999989867789999999999817
No 252
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=85.46 E-value=0.2 Score=22.24 Aligned_cols=24 Identities=25% Similarity=0.444 Sum_probs=20.8
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 932999991798539999999999
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
.-.+++|.|.-|.|||||.+.+..
T Consensus 24 ~Gei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 24 AGEILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp TTCEEECBCCTTSSHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 898999998999809999999948
No 253
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=85.34 E-value=0.28 Score=21.26 Aligned_cols=22 Identities=36% Similarity=0.425 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-|+|+|..|+|||||...+.+.
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999998899999999689
No 254
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=85.32 E-value=0.21 Score=22.04 Aligned_cols=26 Identities=31% Similarity=0.206 Sum_probs=22.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 29999917985399999999998444
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
-.|+|-|.-|+||||+++.+.+....
T Consensus 6 lrI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 6 LRIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 69999888778899999999998734
No 255
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=85.23 E-value=0.2 Score=22.17 Aligned_cols=22 Identities=36% Similarity=0.590 Sum_probs=19.0
Q ss_pred EEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2999991798539999999999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
.-|+|+|.+++|||||..++.+
T Consensus 2 ~~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 2 ADVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CCEEEESSTTSSHHHHHHHSEE
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 8699989999879999999968
No 256
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=85.16 E-value=0.19 Score=22.31 Aligned_cols=26 Identities=31% Similarity=0.396 Sum_probs=19.7
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 79932999991798539999999999
Q 001860 169 NRKFNMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 169 ~~~~~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
....--|.++|..|+|||||..++.+
T Consensus 14 ~~k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 14 SNKELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp CSSCEEEEEEEETTSSHHHHHHHTCC
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHC
T ss_conf 89668999999999988999988733
No 257
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=84.47 E-value=0.29 Score=21.18 Aligned_cols=23 Identities=30% Similarity=0.468 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|+|+|-.|+|||||..++.+..
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~~ 32 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNKE 32 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTST
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999999999999997787
No 258
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.00 E-value=0.19 Score=22.37 Aligned_cols=23 Identities=26% Similarity=0.333 Sum_probs=18.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 29999917985399999999998
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-.|.++|-+|+|||||..++.+.
T Consensus 7 ~Ki~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 7 FKLLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEEEECCCCC------------
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 99999999994999999999709
No 259
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=83.86 E-value=0.71 Score=18.77 Aligned_cols=39 Identities=33% Similarity=0.408 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999999999707--993299999179853999999999984
Q 001860 158 CTLKEILDALSN--RKFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 158 ~~~~~l~~~l~~--~~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
..+.++...+.+ ..---|.++|..|+||||+...+..+.
T Consensus 16 ~~l~e~~~~l~~~~~~~l~I~LvG~tg~GKSSliN~ilg~~ 56 (257)
T d1h65a_ 16 TKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGER 56 (257)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999986457787489998999986999999985898
No 260
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=83.35 E-value=0.26 Score=21.43 Aligned_cols=26 Identities=12% Similarity=0.170 Sum_probs=21.3
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 79932999991798539999999999
Q 001860 169 NRKFNMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 169 ~~~~~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
.++...|+|+|.+++|||||..++..
T Consensus 13 ~~~~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 13 SDTGIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp CSCSEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 76697899988999989999999858
No 261
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=82.97 E-value=0.42 Score=20.17 Aligned_cols=22 Identities=18% Similarity=0.403 Sum_probs=19.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
.|+++|.+|+|||||..++...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999899999899999999688
No 262
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.74 E-value=0.77 Score=18.55 Aligned_cols=28 Identities=21% Similarity=0.237 Sum_probs=23.3
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 7993299999179853999999999984
Q 001860 169 NRKFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 169 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.+++|=|+|+|-.|-|||||+-.+....
T Consensus 14 ~~~IRNI~iiGhvd~GKTTL~d~Ll~~~ 41 (341)
T d1n0ua2 14 VTNVRNMSVIAHVDHGKSTLTDSLVQRA 41 (341)
T ss_dssp GGGEEEEEEECCGGGTHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHC
T ss_conf 3167489999688886999999999977
No 263
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=82.42 E-value=0.6 Score=19.21 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=20.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+-|.|.|..|.||||+.+.+.....
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~ 191 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIP 191 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHCC
T ss_conf 8889994035662578999865301
No 264
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.84 E-value=0.69 Score=18.85 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=27.1
Q ss_pred HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999707993299999179853999999999984
Q 001860 162 EILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 162 ~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
++++.+ +..+.||+|+|.-+.||++|...+++..
T Consensus 23 ~~l~~~-~~~v~vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 23 KILSAI-TQPMVVVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp HHHHTC-CSBEEEEEEEEBTTSSHHHHHHHHTTCS
T ss_pred HHHHCC-CCCEEEEEEECCCCCCHHHHHHHHCCCC
T ss_conf 999707-9987999988999997999999980998
No 265
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=81.38 E-value=0.52 Score=19.61 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=24.0
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCC--CEEEEEEE
Q ss_conf 299999179853999999999984442676--54999997
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLF--EKVISAHV 210 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F--~~~~wv~v 210 (1003)
+-|.|.|..|.||||+|.....+- ..| |-.+++..
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~g---~~lv~DD~~~i~~ 51 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQRG---HRLIADDRVDVYQ 51 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHTT---CEEEEEEEEEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHCC---CEEEECCEEEEEE
T ss_conf 999998089999899999999859---9198168689999
No 266
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=80.73 E-value=0.74 Score=18.64 Aligned_cols=24 Identities=33% Similarity=0.469 Sum_probs=20.7
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 299999179853999999999984
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.+|+|.|-...|||||..++....
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHC
T ss_conf 879999699854999999998236
No 267
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=79.17 E-value=0.23 Score=21.84 Aligned_cols=23 Identities=26% Similarity=0.382 Sum_probs=20.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-|+++|.+|+|||||..++....
T Consensus 2 kI~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999999999999995899
No 268
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=78.92 E-value=0.85 Score=18.29 Aligned_cols=23 Identities=22% Similarity=0.314 Sum_probs=19.6
Q ss_pred CEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 32999991798539999999999
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
.++..|+|.-|.||||+..+++-
T Consensus 23 ~~ln~IvG~NGsGKStiL~Ai~~ 45 (292)
T g1f2t.1 23 EGINLIIGQNGSGKSSLLDAILV 45 (292)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHH
T ss_conf 98599998899889999999999
No 269
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=78.75 E-value=0.72 Score=18.72 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=23.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCC--CEEEEEE
Q ss_conf 299999179853999999999984442676--5499999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLF--EKVISAH 209 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F--~~~~wv~ 209 (1003)
+-|.|.|..|.||||+|.....+-. .| |-.+++.
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~g~---~li~DD~~~~~ 51 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKRGH---RLVADDNVEIR 51 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHTTC---EEEESSEEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHCCC---EEEECCEEEEE
T ss_conf 9999980899999999999998499---38817868999
No 270
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=78.56 E-value=1.1 Score=17.62 Aligned_cols=52 Identities=12% Similarity=0.266 Sum_probs=26.4
Q ss_pred EEEEEECCCCCHHHHHHH-HHHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 299999179853999999-999984442676--549999974860799999999999
Q 001860 173 NMIGVYGMGGVGKTTLVK-EVGRKAKENKLF--EKVISAHVSRTPQIKKIQEEIAEK 226 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~-~v~~~~~~~~~F--~~~~wv~vs~~~~~~~i~~~i~~~ 226 (1003)
..+-|.|.+|.||||.+. .+.+-.+.. .+ +.+..++.+. .....+...+.+.
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~ll~~~-~~~~~~ILvlt~tn-~a~~~i~~~~~~~ 69 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHLIRGC-GYQARHIAAVTFTN-KAAREMKERVGQT 69 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHHHHHH-CCCGGGEEEEESSH-HHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHC-CCCHHHEEEEECCH-HHHHHHHHHHHHH
T ss_conf 9989996288438999999999999956-99955789996869-9999999999985
No 271
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=78.55 E-value=0.72 Score=18.73 Aligned_cols=23 Identities=30% Similarity=0.579 Sum_probs=20.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.|||+|.+.+|||||-.++-+..
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~~ 26 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKAG 26 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 48888999998899999997799
No 272
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=78.35 E-value=0.6 Score=19.24 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=19.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 29999917985399999999998
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
+-+.|.|..|.||||+|.....+
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 99999818999989999999985
No 273
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=76.70 E-value=1.2 Score=17.29 Aligned_cols=52 Identities=21% Similarity=0.188 Sum_probs=33.2
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999991798539999999999844426765499999748607999999999991
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEKM 227 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~l 227 (1003)
.++.|.|.+|.|||+++.++..+.-....+ .+++++. ..+..++...++...
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a~~~g~-~v~~~s~--E~~~~~~~~r~~~~~ 87 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWGTAMGK-KVGLAML--EESVEETAEDLIGLH 87 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHTSCC-CEEEEES--SSCHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHCCC-CEEEEEE--CCCHHHHHHHHHHHH
T ss_conf 089999479997999999999726553366-3457640--111135776999986
No 274
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=75.15 E-value=1.3 Score=17.03 Aligned_cols=63 Identities=11% Similarity=0.191 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH-HHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 89999999997079932999991798539999999-99984442676--54999997486079999999999
Q 001860 157 KCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKE-VGRKAKENKLF--EKVISAHVSRTPQIKKIQEEIAE 225 (1003)
Q Consensus 157 ~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~-v~~~~~~~~~F--~~~~wv~vs~~~~~~~i~~~i~~ 225 (1003)
+.+-.++++. . ...+-|.|.+|.||||.+.+ +.+-.. .... +.++.++.+. .....+...+..
T Consensus 13 ~~eQ~~~v~~---~-~g~~lV~g~aGSGKTt~l~~ri~~ll~-~~~~~p~~il~lt~t~-~aa~~~~~~~~~ 78 (318)
T d1pjra1 13 NKEQQEAVRT---T-EGPLLIMAGAGSGKTRVLTHRIAYLMA-EKHVAPWNILAITFTN-KAAREMRERVQS 78 (318)
T ss_dssp CHHHHHHHHC---C-SSCEEEEECTTSCHHHHHHHHHHHHHH-TTCCCGGGEEEEESSH-HHHHHHHHHHHH
T ss_pred CHHHHHHHHC---C-CCCEEEEECCCCCHHHHHHHHHHHHHH-CCCCCHHHEEEEECCH-HHHHHHHHHHHH
T ss_conf 8999999829---9-999899952986689999999999998-0899878937576649-899989999986
No 275
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=74.80 E-value=0.55 Score=19.44 Aligned_cols=32 Identities=22% Similarity=0.474 Sum_probs=22.2
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99999970799329999917985399999999998
Q 001860 161 KEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 161 ~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
+++..+|.+ +...+.|..|+|||||...+..+
T Consensus 89 ~~L~~~l~~---~~~vl~G~SGVGKSSLiN~L~~~ 120 (231)
T d1t9ha2 89 ADIIPHFQD---KTTVFAGQSGVGKSSLLNAISPE 120 (231)
T ss_dssp TTTGGGGTT---SEEEEEESHHHHHHHHHHHHCC-
T ss_pred HHHHHHHCC---CEEEEECCCCCCHHHHHHHHCCH
T ss_conf 999986435---64999877873487898751517
No 276
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=74.27 E-value=1.3 Score=17.08 Aligned_cols=22 Identities=32% Similarity=0.342 Sum_probs=19.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-|+|.|-.+.|||||+.++...
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~ 26 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYV 26 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHH
T ss_conf 9999947898499999999998
No 277
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=74.00 E-value=1.2 Score=17.27 Aligned_cols=23 Identities=30% Similarity=0.626 Sum_probs=20.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.+||+|.+.+|||||-.++-+..
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~~ 34 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKSV 34 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHST
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 79997899998999999997789
No 278
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=70.38 E-value=1.7 Score=16.34 Aligned_cols=38 Identities=18% Similarity=0.116 Sum_probs=28.4
Q ss_pred HHHHHHHHH-CCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999999970-79932999991798539999999999844
Q 001860 160 LKEILDALS-NRKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 160 ~~~l~~~l~-~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+..+..+|. .+.-.-+.++|+++.|||++|..+.+-..
T Consensus 40 l~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~ 78 (205)
T d1tuea_ 40 LGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQ 78 (205)
T ss_dssp HHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 999999973898731899988998568999999999828
No 279
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.96 E-value=1.8 Score=16.28 Aligned_cols=22 Identities=23% Similarity=0.416 Sum_probs=18.5
Q ss_pred EEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2999991798539999999999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
--|+|+|..|+|||||...+..
T Consensus 57 l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 57 LNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEEECTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 1799989999978999999958
No 280
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=69.79 E-value=1.5 Score=16.72 Aligned_cols=21 Identities=38% Similarity=0.548 Sum_probs=19.0
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 999991798539999999999
Q 001860 174 MIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
-|+|+|-...|||||..++..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCHHHHHHHHHH
T ss_conf 999990778709999999997
No 281
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=69.43 E-value=1.8 Score=16.21 Aligned_cols=43 Identities=21% Similarity=0.189 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 5289999999997079932999991798539999999999844
Q 001860 155 SRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 155 gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
|..+...+.+..+......+|-|.|.-|.||||....+.+...
T Consensus 141 G~~~~~~~~l~~l~~~~~GliLvtGpTGSGKSTTl~~~l~~~~ 183 (401)
T d1p9ra_ 141 GMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELN 183 (401)
T ss_dssp CCCHHHHHHHHHHHTSSSEEEEEECSTTSCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHC
T ss_conf 1357778999999864105489876787774477999866625
No 282
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=69.20 E-value=1.6 Score=16.59 Aligned_cols=22 Identities=36% Similarity=0.447 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9999917985399999999998
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRK 195 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~ 195 (1003)
-|||+|.+-+|||||-.++-+.
T Consensus 2 ~v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 2 EIGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEEECTTSSHHHHHHHHHC-
T ss_pred CEEEECCCCCCHHHHHHHHHCC
T ss_conf 1768899999899999999788
No 283
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=66.37 E-value=2.1 Score=15.83 Aligned_cols=22 Identities=23% Similarity=0.388 Sum_probs=19.0
Q ss_pred EEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2999991798539999999999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
.+..|+|.-|.||||+..+++-
T Consensus 24 ~~~vi~G~NgsGKTtileAI~~ 45 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSLLDAILV 45 (369)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHH
T ss_conf 8199997899999999999999
No 284
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=66.19 E-value=1.4 Score=17.02 Aligned_cols=26 Identities=27% Similarity=0.442 Sum_probs=21.3
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 93299999179853999999999984
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
..-.++|+|++-+||+||...+..+.
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~~~ 136 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAKKN 136 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTSC
T ss_pred CCEEEEEEECCCCCHHHHHHHHHCCC
T ss_conf 75278998667544355542542661
No 285
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=65.05 E-value=1.8 Score=16.18 Aligned_cols=22 Identities=18% Similarity=0.351 Sum_probs=19.2
Q ss_pred EEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2999991798539999999999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
++-.|+|.-|.||||+..++.-
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~ 48 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILF 48 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHH
T ss_conf 8599999999889999999999
No 286
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=61.38 E-value=2.6 Score=15.25 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=28.0
Q ss_pred HHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999999707--993299999179853999999999984
Q 001860 159 TLKEILDALSN--RKFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 159 ~~~~l~~~l~~--~~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-...+..+|.. +.-..+-++|.|+.|||+++..+.+-.
T Consensus 89 f~~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~l 128 (267)
T d1u0ja_ 89 AASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTV 128 (267)
T ss_dssp HHHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9999999975999761799998589887789999999983
No 287
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=60.00 E-value=2.8 Score=15.10 Aligned_cols=26 Identities=27% Similarity=0.378 Sum_probs=20.5
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 32999991798539999999999844
Q 001860 172 FNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 172 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.+-+.|+|..|.|||++++.+.....
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~ 75 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGL 75 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 26589990799968999999999998
No 288
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=59.08 E-value=2.9 Score=15.00 Aligned_cols=18 Identities=39% Similarity=0.726 Sum_probs=15.4
Q ss_pred EEEEEECCCCCHHHHHHH
Q ss_conf 299999179853999999
Q 001860 173 NMIGVYGMGGVGKTTLVK 190 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~ 190 (1003)
.|-.+.|..|.|||||..
T Consensus 15 ~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp CEEEEECSTTSSHHHHHC
T ss_pred CEEEEECCCCCCCCCCEE
T ss_conf 889997047798560232
No 289
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=55.03 E-value=3.3 Score=14.59 Aligned_cols=19 Identities=37% Similarity=0.735 Sum_probs=16.1
Q ss_pred EEEEEECCCCCHHHHHHHH
Q ss_conf 2999991798539999999
Q 001860 173 NMIGVYGMGGVGKTTLVKE 191 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~ 191 (1003)
.|-...|..|.|||||...
T Consensus 15 ~valffGLSGTGKTTLs~~ 33 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLSTD 33 (318)
T ss_dssp CEEEEEECTTSCHHHHTCB
T ss_pred CEEEEECCCCCCCCCCCCC
T ss_conf 8899973687981422107
No 290
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=53.36 E-value=3.5 Score=14.42 Aligned_cols=18 Identities=39% Similarity=0.721 Sum_probs=15.3
Q ss_pred EEEEEECCCCCHHHHHHH
Q ss_conf 299999179853999999
Q 001860 173 NMIGVYGMGGVGKTTLVK 190 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~ 190 (1003)
.+-.+.|..|.|||||..
T Consensus 15 d~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp CEEEEECCTTSSHHHHHC
T ss_pred CEEEEECCCCCCCCCCEE
T ss_conf 879997367788120512
No 291
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=53.08 E-value=3.6 Score=14.39 Aligned_cols=21 Identities=33% Similarity=0.477 Sum_probs=18.4
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 999991798539999999999
Q 001860 174 MIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
-|+|.|-.+.|||||+.++..
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~ 25 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITK 25 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHH
T ss_conf 899995889809999999999
No 292
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=52.79 E-value=1.6 Score=16.58 Aligned_cols=24 Identities=21% Similarity=0.220 Sum_probs=19.2
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 299999179853999999999984
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
.+..|+|.-|.||||+..++.--.
T Consensus 25 ~~tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 25 LVTTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 808998899998799999999996
No 293
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=52.78 E-value=3.6 Score=14.36 Aligned_cols=24 Identities=29% Similarity=0.195 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
-|+|.|-.+-|||||+.++.....
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHB
T ss_pred EEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 899994479999999999999859
No 294
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=51.37 E-value=3.8 Score=14.22 Aligned_cols=66 Identities=11% Similarity=0.160 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8999999999707993299999179853999999999984442676--5499999748607999999999991
Q 001860 157 KCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKENKLF--EKVISAHVSRTPQIKKIQEEIAEKM 227 (1003)
Q Consensus 157 ~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F--~~~~wv~vs~~~~~~~i~~~i~~~l 227 (1003)
+++-++++.. .. ..+.|.|.+|.||||.+-+-....-.+..+ +.++.++... ....++...|.+.+
T Consensus 13 ~~eQ~~~v~~---~~-~~~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltft~-~Aa~ei~~Ri~~~l 80 (623)
T g1qhh.1 13 NKEQQEAVRT---TE-GPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTN-KAAREMRERVQSLL 80 (623)
T ss_dssp CHHHHHHHHC---CS-SCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSH-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHCC---CC-CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCH-HHHHHHHHHHHHHC
T ss_conf 9999999739---99-998999818658999999999999980998933099994419-99999999999861
No 295
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=41.52 E-value=5.4 Score=13.27 Aligned_cols=43 Identities=21% Similarity=0.095 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 5289999999997079932999991798539999999999844
Q 001860 155 SRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 155 gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
+....++++...+..+.....-+.|.-|.|||.+|.......-
T Consensus 87 ~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~ 129 (264)
T d1gm5a3 87 AQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNY 129 (264)
T ss_dssp HHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 3788899999876236753156663535566599999999988
No 296
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=41.10 E-value=5.5 Score=13.23 Aligned_cols=27 Identities=22% Similarity=0.193 Sum_probs=21.6
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 932999991798539999999999844
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
.+--|+|+|-...|||||+.++.....
T Consensus 8 ~~~~i~viGHVd~GKSTL~~~Ll~~~g 34 (222)
T d1zunb3 8 EMLRFLTCGNVDDGKSTLIGRLLHDSK 34 (222)
T ss_dssp EEEEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 755599993789898999999999869
No 297
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=39.90 E-value=5.7 Score=13.12 Aligned_cols=23 Identities=26% Similarity=0.124 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999179853999999999984
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
-|+|.|-.+.|||||+.++....
T Consensus 26 Ni~iiGHVD~GKSTL~~~Ll~~~ 48 (245)
T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFLT 48 (245)
T ss_dssp EEEEEECGGGTHHHHHHHHHHHT
T ss_pred EEEEEEECCCCHHHHHHHHHHHC
T ss_conf 99999527989999999999984
No 298
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=39.84 E-value=5.8 Score=13.11 Aligned_cols=21 Identities=19% Similarity=0.544 Sum_probs=18.3
Q ss_pred EEEEEECCCCCHHHHHHHHHH
Q ss_conf 299999179853999999999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVG 193 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~ 193 (1003)
++-.|+|.-|.|||++..++.
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~ 45 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIK 45 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH
T ss_conf 819999999984899999999
No 299
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=38.43 E-value=6.1 Score=12.97 Aligned_cols=21 Identities=48% Similarity=0.564 Sum_probs=18.4
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 999991798539999999999
Q 001860 174 MIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
-|+|.|-..-|||||+.++..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEECCCCCHHHHHHHHHH
T ss_conf 899997248869999999970
No 300
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=37.15 E-value=6.3 Score=12.85 Aligned_cols=21 Identities=43% Similarity=0.488 Sum_probs=18.0
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 999991798539999999999
Q 001860 174 MIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
-|+|.|-...|||||..++-.
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCHHHHHHHHHH
T ss_conf 999993458849999999970
No 301
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.81 E-value=6.4 Score=12.81 Aligned_cols=24 Identities=25% Similarity=0.159 Sum_probs=20.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 999991798539999999999844
Q 001860 174 MIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 174 vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
-|+|.|-.+-|||||+.++.....
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~~~g 31 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKCG 31 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHS
T ss_pred EEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 799994789989999999999818
No 302
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=34.33 E-value=7 Score=12.57 Aligned_cols=52 Identities=13% Similarity=0.081 Sum_probs=33.1
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 9329999917985399999999998444267654999997486079999999999919
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKAKENKLFEKVISAHVSRTPQIKKIQEEIAEKMG 228 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~ 228 (1003)
.-++.-|++.-|.|||+++-.++.+ ...++.+.+....-..+..+.+.+.++
T Consensus 7 ~~~~~ll~apTGsGKT~~~~~~~~~------~~~~vli~~P~~~l~~q~~~~~~~~~~ 58 (136)
T d1a1va1 7 SFQVAHLHAPTGSGKSTKVPAAYAA------QGYKVLVLNPSVAATLGFGAYMSKAHG 58 (136)
T ss_dssp SCEEEEEECCTTSCTTTHHHHHHHT------TTCCEEEEESCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHH------CCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 7888999968877999999999998------699399976769999999999999852
No 303
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.98 E-value=7.4 Score=12.43 Aligned_cols=22 Identities=23% Similarity=0.528 Sum_probs=18.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2999991798539999999999
Q 001860 173 NMIGVYGMGGVGKTTLVKEVGR 194 (1003)
Q Consensus 173 ~vi~I~G~gGiGKTtLa~~v~~ 194 (1003)
.+-.|+|.-|.|||++..++.-
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~~ 47 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAISF 47 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHH
T ss_conf 9899999999988999999999
No 304
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=27.44 E-value=9.2 Score=11.84 Aligned_cols=26 Identities=19% Similarity=0.428 Sum_probs=21.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 93299999179853999999999984
Q 001860 171 KFNMIGVYGMGGVGKTTLVKEVGRKA 196 (1003)
Q Consensus 171 ~~~vi~I~G~gGiGKTtLa~~v~~~~ 196 (1003)
..+-|-+.|.||+|-+.||+...+.-
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~G 32 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNEG 32 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHT
T ss_pred HCCEEEEEEECHHHHHHHHHHHHHCC
T ss_conf 07779999877999999999998489
No 305
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=25.15 E-value=10 Score=11.58 Aligned_cols=45 Identities=18% Similarity=0.103 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 135289999999997079932999991798539999999999844
Q 001860 153 FQSRKCTLKEILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAK 197 (1003)
Q Consensus 153 ~~gr~~~~~~l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 197 (1003)
-.......+++.+.+..+.....-+.|..|.|||.++-......-
T Consensus 57 t~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~ 101 (233)
T d2eyqa3 57 TPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAV 101 (233)
T ss_dssp CHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 604888999999998545766708983888772899999999999
No 306
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=21.58 E-value=12 Score=11.15 Aligned_cols=34 Identities=32% Similarity=0.297 Sum_probs=22.6
Q ss_pred HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 999970799329999917985399999999998444
Q 001860 163 ILDALSNRKFNMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 163 l~~~l~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
+.+.+.....++|+|.|. -||||.+..+++-.+.
T Consensus 5 ~~~~l~~~~~~~iAITGT--nGKTTt~~~l~~iL~~ 38 (207)
T d1j6ua3 5 FRDTLKREKKEEFAVTGT--DGKTTTTAMVAHVLKH 38 (207)
T ss_dssp HHHHHHHHCCCEEEEECS--SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECC--CCHHHHHHHHHHHHHH
T ss_conf 999985669988999889--8899999999999985
No 307
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=20.90 E-value=12 Score=11.06 Aligned_cols=37 Identities=22% Similarity=0.349 Sum_probs=27.2
Q ss_pred HHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999999707--99329999917985399999999998444
Q 001860 160 LKEILDALSN--RKFNMIGVYGMGGVGKTTLVKEVGRKAKE 198 (1003)
Q Consensus 160 ~~~l~~~l~~--~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 198 (1003)
+.++++.|.. .+.++|+|.|.- ||||.+..+++=.+.
T Consensus 29 ~~~~l~~lg~P~~~lkvI~VTGTN--GKTSt~~~i~~IL~~ 67 (296)
T d1o5za2 29 ISMLLSKLGNPHLEYKTIHIGGTN--GKGSVANMVSNILVS 67 (296)
T ss_dssp HHHHHHHTTCGGGSSEEEEEECSS--SHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHCCEEEEEECC--CHHHHHHHHHHHHHH
T ss_conf 999999809926649879997038--689999999999997
Done!