Query 001865
Match_columns 1002
No_of_seqs 653 out of 4695
Neff 8.2
Searched_HMMs 46136
Date Tue Apr 2 00:59:39 2013
Command hhsearch -i /work/01045/syshi/lefta3m/001865.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/001865hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0610 Putative serine/threon 100.0 2.3E-54 4.9E-59 462.4 26.4 336 643-978 50-415 (459)
2 KOG0605 NDR and related serine 100.0 2.3E-53 4.9E-58 468.8 25.8 319 665-989 137-481 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 3.1E-53 6.8E-58 451.3 23.1 283 666-978 22-304 (357)
4 KOG0616 cAMP-dependent protein 100.0 6E-52 1.3E-56 425.8 22.7 289 666-989 41-336 (355)
5 KOG0592 3-phosphoinositide-dep 100.0 5.1E-52 1.1E-56 457.0 22.9 288 666-975 70-358 (604)
6 KOG0575 Polo-like serine/threo 100.0 1.1E-50 2.4E-55 454.6 24.4 257 669-960 18-274 (592)
7 KOG0615 Serine/threonine prote 100.0 2.2E-51 4.9E-56 438.4 15.9 261 668-962 171-444 (475)
8 KOG0581 Mitogen-activated prot 100.0 4.6E-50 1E-54 427.0 22.4 263 664-963 74-343 (364)
9 KOG0694 Serine/threonine prote 100.0 5.8E-49 1.2E-53 445.2 24.6 289 664-984 363-653 (694)
10 KOG0595 Serine/threonine-prote 100.0 2.2E-46 4.7E-51 401.5 23.4 258 668-960 9-273 (429)
11 KOG0593 Predicted protein kina 100.0 5.1E-47 1.1E-51 389.7 16.7 259 669-961 2-290 (396)
12 KOG0588 Serine/threonine prote 100.0 5E-46 1.1E-50 417.1 21.4 264 668-967 11-275 (786)
13 KOG0597 Serine-threonine prote 100.0 4.2E-46 9.1E-51 409.0 18.1 255 669-960 2-256 (808)
14 KOG0591 NIMA (never in mitosis 100.0 1.7E-46 3.6E-51 382.2 11.5 257 667-951 17-281 (375)
15 KOG0033 Ca2+/calmodulin-depend 100.0 1.1E-46 2.3E-51 376.2 8.7 261 666-961 8-273 (355)
16 KOG0583 Serine/threonine prote 100.0 1.5E-44 3.1E-49 409.0 26.4 262 666-961 14-281 (370)
17 KOG0661 MAPK related serine/th 100.0 1.5E-45 3.2E-50 400.3 17.0 263 666-964 7-300 (538)
18 KOG0585 Ca2+/calmodulin-depend 100.0 5.5E-45 1.2E-49 394.8 20.3 266 666-960 94-377 (576)
19 KOG0690 Serine/threonine prote 100.0 5.7E-45 1.2E-49 376.2 18.3 283 665-978 164-447 (516)
20 KOG0659 Cdk activating kinase 100.0 2.7E-44 5.9E-49 364.4 22.5 261 669-963 2-289 (318)
21 KOG0580 Serine/threonine prote 100.0 3.8E-45 8.3E-50 365.8 14.6 260 666-960 19-278 (281)
22 cd05612 STKc_PRKX_like Catalyt 100.0 6.7E-44 1.4E-48 396.4 26.0 281 669-983 1-282 (291)
23 KOG0600 Cdc2-related protein k 100.0 1.7E-44 3.6E-49 394.8 20.3 262 666-960 114-405 (560)
24 PTZ00426 cAMP-dependent protei 100.0 9.1E-44 2E-48 403.7 27.1 285 665-983 26-312 (340)
25 PTZ00263 protein kinase A cata 100.0 1.5E-43 3.3E-48 400.6 26.9 268 667-968 16-284 (329)
26 cd05571 STKc_PKB Catalytic dom 100.0 1.7E-43 3.8E-48 399.1 26.8 265 675-970 1-266 (323)
27 KOG0612 Rho-associated, coiled 100.0 6.8E-45 1.5E-49 428.0 15.6 287 665-983 71-364 (1317)
28 KOG0582 Ste20-like serine/thre 100.0 1.6E-43 3.5E-48 381.6 24.2 273 662-964 19-302 (516)
29 KOG0578 p21-activated serine/t 100.0 3.7E-44 8E-49 399.2 19.5 266 656-960 262-528 (550)
30 cd05631 STKc_GRK4 Catalytic do 100.0 4.4E-43 9.6E-48 388.6 26.6 280 670-977 1-283 (285)
31 cd05628 STKc_NDR1 Catalytic do 100.0 9.3E-43 2E-47 399.6 30.0 295 669-970 1-308 (363)
32 KOG0599 Phosphorylase kinase g 100.0 1.8E-44 3.9E-49 365.1 12.8 270 668-971 16-299 (411)
33 cd05629 STKc_NDR_like_fungal C 100.0 5.9E-43 1.3E-47 403.4 27.1 303 669-980 1-328 (377)
34 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.3E-43 2E-47 394.9 27.6 277 669-983 1-283 (333)
35 KOG0663 Protein kinase PITSLRE 100.0 1.8E-43 3.9E-48 368.2 19.3 264 667-964 74-370 (419)
36 KOG0198 MEKK and related serin 100.0 2.2E-43 4.8E-48 383.7 20.5 261 669-961 17-282 (313)
37 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-42 2.6E-47 399.1 27.5 301 669-973 1-314 (364)
38 cd05593 STKc_PKB_gamma Catalyt 100.0 1.8E-42 4E-47 391.5 27.6 264 675-969 1-265 (328)
39 cd05585 STKc_YPK1_like Catalyt 100.0 2.5E-42 5.4E-47 387.7 27.5 262 677-970 1-262 (312)
40 cd05596 STKc_ROCK Catalytic do 100.0 1.9E-42 4.1E-47 397.7 27.0 285 665-982 39-331 (370)
41 cd05595 STKc_PKB_beta Catalyti 100.0 3.5E-42 7.6E-47 388.4 28.1 263 675-968 1-264 (323)
42 cd05626 STKc_LATS2 Catalytic d 100.0 5.4E-42 1.2E-46 395.9 29.6 296 670-971 2-321 (381)
43 KOG0611 Predicted serine/threo 100.0 2.5E-43 5.4E-48 372.9 16.7 255 668-959 52-307 (668)
44 cd05627 STKc_NDR2 Catalytic do 100.0 3.4E-42 7.3E-47 394.6 26.5 299 669-971 1-309 (360)
45 cd05590 STKc_nPKC_eta Catalyti 100.0 4.2E-42 9.1E-47 387.2 26.6 273 675-978 1-276 (320)
46 cd05587 STKc_cPKC Catalytic do 100.0 6.1E-42 1.3E-46 386.7 27.6 278 670-978 1-280 (324)
47 cd05601 STKc_CRIK Catalytic do 100.0 2E-42 4.3E-47 391.7 23.5 273 669-973 1-281 (330)
48 cd05625 STKc_LATS1 Catalytic d 100.0 6.3E-42 1.4E-46 395.6 28.0 294 670-967 2-317 (382)
49 KOG0660 Mitogen-activated prot 100.0 1.3E-42 2.8E-47 368.6 20.1 261 668-961 21-316 (359)
50 cd05598 STKc_LATS Catalytic do 100.0 4.5E-42 9.9E-47 396.0 26.6 292 669-967 1-313 (376)
51 cd05621 STKc_ROCK2 Catalytic d 100.0 4.2E-42 9E-47 394.6 25.9 285 666-983 40-332 (370)
52 KOG0032 Ca2+/calmodulin-depend 100.0 5.5E-42 1.2E-46 387.6 26.3 259 668-961 34-299 (382)
53 cd05591 STKc_nPKC_epsilon Cata 100.0 7.3E-42 1.6E-46 385.5 27.3 273 675-978 1-277 (321)
54 KOG0986 G protein-coupled rece 100.0 3.7E-43 8E-48 378.0 15.6 296 664-989 180-480 (591)
55 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.2E-42 6.9E-47 393.2 24.1 305 669-981 1-309 (350)
56 cd05589 STKc_PKN Catalytic dom 100.0 9.2E-42 2E-46 385.2 27.6 267 671-969 1-271 (324)
57 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-41 2.4E-46 384.5 27.4 278 670-978 1-280 (323)
58 cd05575 STKc_SGK Catalytic dom 100.0 9.5E-42 2.1E-46 384.9 26.8 264 675-969 1-265 (323)
59 cd05574 STKc_phototropin_like 100.0 3E-41 6.5E-46 379.5 30.6 311 669-979 1-313 (316)
60 cd05594 STKc_PKB_alpha Catalyt 100.0 6.9E-42 1.5E-46 386.4 25.2 264 675-969 1-266 (325)
61 cd05619 STKc_nPKC_theta Cataly 100.0 1.8E-41 3.9E-46 381.3 27.8 269 675-978 1-271 (316)
62 cd05615 STKc_cPKC_alpha Cataly 100.0 2.5E-41 5.3E-46 381.5 28.4 278 670-978 1-280 (323)
63 cd05588 STKc_aPKC Catalytic do 100.0 1.9E-41 4.2E-46 383.4 27.2 267 675-972 1-279 (329)
64 cd05592 STKc_nPKC_theta_delta 100.0 2.3E-41 4.9E-46 380.6 27.4 270 675-978 1-271 (316)
65 cd05570 STKc_PKC Catalytic dom 100.0 2.2E-41 4.8E-46 381.0 27.4 273 675-978 1-275 (318)
66 cd05607 STKc_GRK7 Catalytic do 100.0 3.2E-41 6.9E-46 372.1 27.3 272 677-977 1-276 (277)
67 cd05620 STKc_nPKC_delta Cataly 100.0 3.1E-41 6.7E-46 379.5 27.3 270 675-978 1-271 (316)
68 cd05622 STKc_ROCK1 Catalytic d 100.0 3.5E-41 7.6E-46 387.2 27.7 268 665-966 39-315 (371)
69 cd05604 STKc_SGK3 Catalytic do 100.0 2.4E-41 5.2E-46 382.0 25.9 267 675-972 1-268 (325)
70 cd05608 STKc_GRK1 Catalytic do 100.0 4.7E-41 1E-45 371.4 27.2 272 677-977 1-279 (280)
71 KOG0608 Warts/lats-like serine 100.0 4.1E-42 9E-47 380.5 17.9 305 666-974 626-947 (1034)
72 KOG4717 Serine/threonine prote 100.0 7.7E-42 1.7E-46 370.7 19.6 262 668-965 17-280 (864)
73 cd05605 STKc_GRK4_like Catalyt 100.0 5.3E-41 1.1E-45 371.9 26.9 280 670-977 1-283 (285)
74 cd05618 STKc_aPKC_iota Catalyt 100.0 5.3E-41 1.1E-45 379.8 27.4 265 675-970 1-277 (329)
75 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.8E-41 1.3E-45 379.2 27.4 277 675-982 1-287 (327)
76 KOG0594 Protein kinase PCTAIRE 100.0 3E-41 6.5E-46 360.1 23.4 261 668-961 10-308 (323)
77 cd05584 STKc_p70S6K Catalytic 100.0 6.9E-41 1.5E-45 377.9 27.7 265 674-969 1-270 (323)
78 cd05586 STKc_Sck1_like Catalyt 100.0 2.2E-41 4.8E-46 383.1 23.5 273 677-979 1-277 (330)
79 cd05602 STKc_SGK1 Catalytic do 100.0 6.1E-41 1.3E-45 378.7 27.0 264 675-969 1-265 (325)
80 KOG0201 Serine/threonine prote 100.0 6.7E-43 1.5E-47 377.2 9.1 258 669-962 13-270 (467)
81 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-40 2.6E-45 377.2 28.0 273 669-972 1-283 (331)
82 KOG0192 Tyrosine kinase specif 100.0 7.6E-41 1.7E-45 375.1 25.8 259 663-951 35-299 (362)
83 cd05603 STKc_SGK2 Catalytic do 100.0 9.7E-41 2.1E-45 376.4 26.8 263 675-968 1-264 (321)
84 KOG0614 cGMP-dependent protein 100.0 1.5E-42 3.2E-47 376.8 10.3 295 665-989 416-711 (732)
85 cd07848 STKc_CDKL5 Catalytic d 100.0 1.4E-40 3E-45 368.6 25.7 257 669-958 1-287 (287)
86 cd05614 STKc_MSK2_N N-terminal 100.0 1.9E-40 4.1E-45 375.9 27.1 279 670-978 1-290 (332)
87 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-40 2.7E-45 377.1 25.6 277 669-974 1-285 (331)
88 KOG0667 Dual-specificity tyros 100.0 4.1E-41 8.9E-46 382.3 21.3 253 670-961 187-508 (586)
89 cd05623 STKc_MRCK_alpha Cataly 100.0 1.9E-40 4.2E-45 375.8 26.8 275 669-974 1-285 (332)
90 cd05582 STKc_RSK_N N-terminal 100.0 8.5E-41 1.8E-45 376.4 23.6 266 674-971 1-270 (318)
91 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.9E-40 4.1E-45 368.1 25.9 256 668-958 4-288 (288)
92 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.9E-40 4.2E-45 370.8 26.0 261 668-963 4-296 (303)
93 KOG0696 Serine/threonine prote 100.0 1.7E-41 3.8E-46 359.6 14.4 289 664-983 344-634 (683)
94 cd06649 PKc_MEK2 Catalytic dom 100.0 1.1E-39 2.4E-44 369.4 29.1 262 666-964 2-310 (331)
95 KOG0589 Serine/threonine prote 100.0 6.2E-41 1.3E-45 372.7 17.7 262 668-962 3-265 (426)
96 cd05632 STKc_GRK5 Catalytic do 100.0 1.5E-39 3.2E-44 360.4 28.2 280 670-977 1-283 (285)
97 cd05580 STKc_PKA Catalytic dom 100.0 2.1E-39 4.5E-44 360.0 29.5 278 669-980 1-279 (290)
98 KOG0197 Tyrosine kinases [Sign 100.0 1.8E-40 3.8E-45 369.9 20.4 255 661-947 198-453 (468)
99 cd05630 STKc_GRK6 Catalytic do 100.0 1.4E-39 3E-44 360.6 27.0 270 670-968 1-274 (285)
100 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9.6E-40 2.1E-44 370.7 25.7 263 670-964 1-299 (338)
101 cd07862 STKc_CDK6 Catalytic do 100.0 1.7E-39 3.8E-44 360.3 26.3 256 669-958 1-290 (290)
102 KOG0579 Ste20-like serine/thre 100.0 4.8E-41 1E-45 371.2 13.1 260 668-962 31-296 (1187)
103 KOG0658 Glycogen synthase kina 100.0 1.2E-40 2.6E-45 354.2 15.3 266 670-977 25-326 (364)
104 PHA03212 serine/threonine kina 100.0 1.8E-39 3.9E-44 375.0 26.2 254 666-961 89-382 (391)
105 KOG0596 Dual specificity; seri 100.0 3.3E-40 7.3E-45 363.3 18.9 261 665-960 357-632 (677)
106 PLN00034 mitogen-activated pro 100.0 3.8E-39 8.3E-44 368.3 27.8 257 665-961 70-334 (353)
107 cd06650 PKc_MEK1 Catalytic dom 100.0 6E-39 1.3E-43 363.6 27.8 259 666-961 2-305 (333)
108 KOG0574 STE20-like serine/thre 100.0 1.1E-41 2.4E-46 348.3 4.3 256 670-962 34-290 (502)
109 cd07853 STKc_NLK Catalytic dom 100.0 7.8E-39 1.7E-43 368.5 28.1 261 670-964 1-297 (372)
110 PTZ00036 glycogen synthase kin 100.0 3.9E-39 8.4E-44 378.0 25.9 256 668-963 65-359 (440)
111 cd07876 STKc_JNK2 Catalytic do 100.0 6.8E-39 1.5E-43 367.2 27.3 255 668-960 20-320 (359)
112 cd07875 STKc_JNK1 Catalytic do 100.0 8.2E-39 1.8E-43 367.2 27.7 255 668-960 23-323 (364)
113 cd05609 STKc_MAST Catalytic do 100.0 2.9E-38 6.3E-43 353.5 30.6 302 669-987 1-303 (305)
114 KOG0695 Serine/threonine prote 100.0 9.8E-40 2.1E-44 338.1 17.0 290 662-982 243-543 (593)
115 KOG0577 Serine/threonine prote 100.0 3.2E-40 6.9E-45 363.4 14.2 254 670-960 27-283 (948)
116 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-38 2.3E-43 365.0 26.8 256 668-961 16-317 (355)
117 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.2E-38 2.5E-43 357.4 26.2 259 668-961 5-292 (309)
118 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-38 2.3E-43 353.5 25.0 255 670-958 1-288 (288)
119 PTZ00283 serine/threonine prot 100.0 1.5E-38 3.2E-43 377.6 26.1 269 666-965 29-307 (496)
120 KOG0607 MAP kinase-interacting 100.0 1.7E-39 3.7E-44 335.6 15.4 265 671-964 79-370 (463)
121 PTZ00284 protein kinase; Provi 100.0 1.9E-38 4.2E-43 376.0 26.6 254 667-961 127-444 (467)
122 PTZ00267 NIMA-related protein 100.0 2.4E-38 5.2E-43 375.5 27.3 261 668-961 66-329 (478)
123 cd06625 STKc_MEKK3_like Cataly 100.0 6E-38 1.3E-42 342.5 28.2 260 669-958 2-263 (263)
124 cd05577 STKc_GRK Catalytic dom 100.0 3.5E-38 7.5E-43 347.7 26.6 264 677-968 1-267 (277)
125 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-38 2.5E-43 362.9 23.3 255 668-961 14-304 (343)
126 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-38 4.6E-43 360.0 24.6 257 664-947 2-326 (338)
127 KOG0604 MAP kinase-activated p 100.0 1.3E-39 2.9E-44 334.4 13.1 253 668-960 60-327 (400)
128 KOG0983 Mitogen-activated prot 100.0 6E-39 1.3E-43 325.5 16.8 260 666-961 89-355 (391)
129 cd06644 STKc_STK10_LOK Catalyt 100.0 1.1E-37 2.5E-42 346.4 28.3 264 668-966 11-280 (292)
130 cd05572 STKc_cGK_PKG Catalytic 100.0 8.6E-38 1.9E-42 341.3 26.6 258 677-964 1-261 (262)
131 cd08227 PK_STRAD_alpha Pseudok 100.0 7E-38 1.5E-42 354.1 26.7 265 673-962 2-314 (327)
132 cd07873 STKc_PCTAIRE1 Catalyti 100.0 9.8E-38 2.1E-42 348.5 26.9 260 668-962 5-293 (301)
133 cd08223 STKc_Nek4 Catalytic do 100.0 2E-37 4.4E-42 337.1 28.5 256 670-958 1-257 (257)
134 cd08529 STKc_FA2-like Catalyti 100.0 2E-37 4.4E-42 336.7 28.1 256 670-958 1-256 (256)
135 cd06637 STKc_TNIK Catalytic do 100.0 1.6E-37 3.4E-42 341.0 26.3 256 668-958 5-272 (272)
136 PHA03207 serine/threonine kina 100.0 7.7E-38 1.7E-42 362.5 25.0 262 667-968 90-388 (392)
137 cd06619 PKc_MKK5 Catalytic dom 100.0 2.5E-37 5.5E-42 341.3 27.7 252 669-961 1-259 (279)
138 PTZ00266 NIMA-related protein 100.0 1.3E-37 2.7E-42 379.7 27.3 264 666-963 10-303 (1021)
139 cd05633 STKc_GRK3 Catalytic do 100.0 2.9E-37 6.4E-42 340.9 27.9 261 676-968 1-268 (279)
140 PF00069 Pkinase: Protein kina 100.0 3.8E-38 8.3E-43 343.0 20.5 254 671-958 1-260 (260)
141 cd07861 STKc_CDK1_euk Catalyti 100.0 1.9E-37 4.2E-42 342.8 26.2 256 670-958 1-285 (285)
142 cd05611 STKc_Rim15_like Cataly 100.0 2.2E-37 4.9E-42 337.6 26.0 256 675-964 2-260 (260)
143 cd05579 STKc_MAST_like Catalyt 100.0 1.7E-37 3.6E-42 338.6 24.9 265 677-963 1-265 (265)
144 cd06611 STKc_SLK_like Catalyti 100.0 2.2E-37 4.8E-42 341.7 26.1 260 668-962 4-269 (280)
145 PHA03211 serine/threonine kina 100.0 1.8E-37 4E-42 362.8 26.7 254 667-960 167-460 (461)
146 cd06609 STKc_MST3_like Catalyt 100.0 3.4E-37 7.4E-42 339.0 27.1 257 669-961 1-257 (274)
147 PHA03209 serine/threonine kina 100.0 1.1E-37 2.5E-42 356.6 23.5 252 667-961 64-357 (357)
148 PHA02988 hypothetical protein; 100.0 2.9E-37 6.2E-42 341.7 25.9 246 675-954 26-278 (283)
149 cd06643 STKc_SLK Catalytic dom 100.0 5.4E-37 1.2E-41 339.0 27.9 257 670-961 6-268 (282)
150 cd06645 STKc_MAP4K3 Catalytic 100.0 2.9E-37 6.4E-42 338.1 25.5 254 668-957 8-267 (267)
151 cd06615 PKc_MEK Catalytic doma 100.0 4.7E-37 1E-41 344.3 27.6 255 669-960 1-292 (308)
152 KOG0662 Cyclin-dependent kinas 100.0 5.5E-38 1.2E-42 299.9 16.4 259 669-961 2-289 (292)
153 cd05606 STKc_beta_ARK Catalyti 100.0 6.3E-37 1.4E-41 338.0 27.5 260 676-972 1-272 (278)
154 cd05061 PTKc_InsR Catalytic do 100.0 6.6E-37 1.4E-41 339.6 27.7 271 665-963 2-288 (288)
155 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.3E-37 1.8E-41 334.4 28.1 261 670-958 1-267 (267)
156 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.2E-37 9.1E-42 339.8 26.0 256 668-958 15-282 (282)
157 cd07868 STKc_CDK8 Catalytic do 100.0 4.3E-37 9.3E-42 345.9 26.2 251 674-958 6-317 (317)
158 cd08221 STKc_Nek9 Catalytic do 100.0 1E-36 2.2E-41 331.5 28.2 256 670-958 1-256 (256)
159 cd06654 STKc_PAK1 Catalytic do 100.0 5.7E-37 1.2E-41 341.6 26.7 256 669-961 20-276 (296)
160 cd06656 STKc_PAK3 Catalytic do 100.0 4.4E-37 9.5E-42 342.7 25.1 256 669-961 19-275 (297)
161 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8E-37 1.7E-41 334.0 26.4 261 669-958 1-267 (267)
162 cd08218 STKc_Nek1 Catalytic do 100.0 9.4E-37 2E-41 331.8 26.6 256 670-958 1-256 (256)
163 cd06655 STKc_PAK2 Catalytic do 100.0 8.8E-37 1.9E-41 340.1 26.9 257 669-962 19-276 (296)
164 cd06646 STKc_MAP4K5 Catalytic 100.0 6.6E-37 1.4E-41 335.3 25.1 254 668-957 8-267 (267)
165 KOG0586 Serine/threonine prote 100.0 7.5E-38 1.6E-42 351.8 17.7 263 663-962 50-313 (596)
166 cd06651 STKc_MEKK3 Catalytic d 100.0 1.5E-36 3.3E-41 332.5 27.5 259 670-959 3-265 (266)
167 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-36 2.6E-41 336.5 26.8 256 669-958 1-286 (286)
168 cd05578 STKc_Yank1 Catalytic d 100.0 3.8E-37 8.2E-42 335.4 22.4 255 670-958 1-258 (258)
169 cd07839 STKc_CDK5 Catalytic do 100.0 3.9E-37 8.6E-42 340.3 22.8 255 670-958 1-284 (284)
170 cd05610 STKc_MASTL Catalytic d 100.0 1.9E-36 4E-41 371.6 31.1 151 668-820 3-153 (669)
171 cd06631 STKc_YSK4 Catalytic do 100.0 1.6E-36 3.4E-41 331.9 27.3 261 670-958 1-265 (265)
172 cd07832 STKc_CCRK Catalytic do 100.0 1.4E-36 3.1E-41 335.8 27.3 257 670-959 1-286 (286)
173 KOG0671 LAMMER dual specificit 100.0 1.9E-38 4.1E-43 337.3 11.5 262 660-961 81-412 (415)
174 KOG4236 Serine/threonine prote 100.0 2.3E-38 5E-43 344.5 12.0 258 674-967 569-832 (888)
175 cd08220 STKc_Nek8 Catalytic do 100.0 2.2E-36 4.8E-41 328.5 27.3 255 670-958 1-256 (256)
176 KOG4721 Serine/threonine prote 100.0 2.9E-38 6.4E-43 346.7 12.4 248 663-956 118-365 (904)
177 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-36 2.7E-41 336.3 25.2 256 670-958 1-284 (284)
178 cd06652 STKc_MEKK2 Catalytic d 100.0 2.7E-36 5.9E-41 330.2 27.7 260 669-959 2-265 (265)
179 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-36 3.1E-41 347.2 26.4 255 668-960 15-316 (353)
180 cd05106 PTKc_CSF-1R Catalytic 100.0 7.5E-37 1.6E-41 351.7 24.0 257 665-948 34-365 (374)
181 cd05064 PTKc_EphR_A10 Catalyti 100.0 2E-36 4.4E-41 331.6 26.0 254 666-953 2-259 (266)
182 cd06613 STKc_MAP4K3_like Catal 100.0 2.5E-36 5.4E-41 329.3 26.6 254 669-957 3-262 (262)
183 cd05048 PTKc_Ror Catalytic Dom 100.0 2.1E-36 4.5E-41 334.3 26.0 258 666-955 2-279 (283)
184 cd06612 STKc_MST1_2 Catalytic 100.0 2.5E-36 5.5E-41 328.0 26.1 253 669-958 3-256 (256)
185 cd05104 PTKc_Kit Catalytic dom 100.0 1.4E-36 3.1E-41 349.7 25.3 259 665-954 31-369 (375)
186 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-36 2.8E-41 338.1 24.1 255 669-960 22-277 (292)
187 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-36 5E-41 338.7 26.3 264 667-964 5-299 (309)
188 KOG4279 Serine/threonine prote 100.0 7.1E-38 1.5E-42 349.6 13.8 250 676-960 582-837 (1226)
189 cd05052 PTKc_Abl Catalytic dom 100.0 3.2E-36 6.9E-41 329.3 26.6 251 666-947 3-254 (263)
190 cd05096 PTKc_DDR1 Catalytic do 100.0 3.1E-36 6.6E-41 337.0 27.0 255 667-952 3-298 (304)
191 KOG0193 Serine/threonine prote 100.0 1.1E-37 2.3E-42 347.9 14.9 264 662-956 385-654 (678)
192 KOG2345 Serine/threonine prote 100.0 5E-38 1.1E-42 315.9 11.0 266 665-955 17-296 (302)
193 cd06608 STKc_myosinIII_like Ca 100.0 2.5E-36 5.4E-41 331.4 25.5 256 668-958 5-275 (275)
194 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.3E-36 4.9E-41 334.7 25.3 257 669-961 1-268 (286)
195 cd06605 PKc_MAPKK Catalytic do 100.0 1.6E-36 3.5E-41 331.6 23.7 256 669-960 1-262 (265)
196 cd08219 STKc_Nek3 Catalytic do 100.0 3.7E-36 8E-41 327.0 26.4 252 670-955 1-252 (255)
197 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.7E-36 5.9E-41 333.9 25.6 257 667-960 3-271 (284)
198 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.9E-36 6.3E-41 333.0 25.7 261 669-964 1-270 (283)
199 KOG1989 ARK protein kinase fam 100.0 3.2E-37 6.9E-42 361.3 18.5 259 665-948 33-304 (738)
200 cd05072 PTKc_Lyn Catalytic dom 100.0 3.6E-36 7.8E-41 328.3 25.6 249 665-945 2-251 (261)
201 cd06630 STKc_MEKK1 Catalytic d 100.0 4.1E-36 8.8E-41 329.0 26.0 261 670-959 1-268 (268)
202 cd06648 STKc_PAK_II Catalytic 100.0 7.8E-36 1.7E-40 330.6 27.7 255 670-961 20-275 (285)
203 PLN00009 cyclin-dependent kina 100.0 5.1E-36 1.1E-40 333.3 26.2 260 669-961 2-290 (294)
204 cd05054 PTKc_VEGFR Catalytic d 100.0 3.1E-36 6.8E-41 341.8 24.7 261 664-955 2-329 (337)
205 cd06639 STKc_myosinIIIB Cataly 100.0 8.5E-36 1.8E-40 331.1 27.6 257 668-959 21-291 (291)
206 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.7E-36 5.8E-41 333.8 23.4 256 669-958 1-286 (286)
207 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.6E-36 1.7E-40 327.8 26.6 258 670-958 2-272 (272)
208 cd06632 STKc_MEKK1_plant Catal 100.0 1E-35 2.2E-40 323.5 27.3 255 670-958 1-258 (258)
209 cd06607 STKc_TAO Catalytic dom 100.0 8.5E-36 1.8E-40 333.9 27.5 256 669-961 15-273 (307)
210 cd06640 STKc_MST4 Catalytic do 100.0 7.8E-36 1.7E-40 329.0 26.6 257 669-962 4-260 (277)
211 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.8E-36 4E-41 333.9 21.5 257 669-962 4-260 (277)
212 cd06638 STKc_myosinIIIA Cataly 100.0 6.2E-36 1.3E-40 331.1 25.7 257 667-958 16-286 (286)
213 PRK13184 pknD serine/threonine 100.0 7.3E-36 1.6E-40 363.2 28.6 270 669-947 2-281 (932)
214 cd07841 STKc_CDK7 Catalytic do 100.0 5.2E-36 1.1E-40 333.8 25.3 259 670-961 1-288 (298)
215 KOG0584 Serine/threonine prote 100.0 3E-37 6.4E-42 347.1 15.1 253 672-961 43-302 (632)
216 cd06623 PKc_MAPKK_plant_like C 100.0 8.7E-36 1.9E-40 325.2 26.3 258 669-962 1-263 (264)
217 cd05613 STKc_MSK1_N N-terminal 100.0 1.1E-35 2.3E-40 330.1 27.4 269 670-968 1-281 (290)
218 PHA03210 serine/threonine kina 100.0 1.3E-36 2.8E-41 362.0 21.4 268 668-966 147-465 (501)
219 cd07844 STKc_PCTAIRE_like Cata 100.0 6.6E-36 1.4E-40 331.8 25.6 256 668-958 4-291 (291)
220 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.6E-36 1E-40 340.7 24.7 289 669-1001 5-328 (337)
221 cd07867 STKc_CDC2L6 Catalytic 100.0 8.1E-36 1.7E-40 335.4 26.2 250 675-958 7-317 (317)
222 cd06626 STKc_MEKK4 Catalytic d 100.0 1.8E-35 4E-40 322.9 28.1 259 670-958 1-264 (264)
223 cd08225 STKc_Nek5 Catalytic do 100.0 8.5E-36 1.8E-40 324.1 25.4 256 670-958 1-257 (257)
224 cd05049 PTKc_Trk Catalytic dom 100.0 8.6E-36 1.9E-40 328.7 25.7 255 667-953 3-275 (280)
225 cd07837 STKc_CdkB_plant Cataly 100.0 9E-36 2E-40 331.3 26.1 258 669-959 1-295 (295)
226 cd08228 STKc_Nek6 Catalytic do 100.0 1E-35 2.2E-40 325.8 26.1 255 669-954 2-260 (267)
227 cd06917 STKc_NAK1_like Catalyt 100.0 7.5E-36 1.6E-40 328.8 25.2 256 670-961 2-261 (277)
228 cd07880 STKc_p38gamma_MAPK12 C 100.0 7.5E-36 1.6E-40 339.8 25.9 255 668-961 14-304 (343)
229 cd05581 STKc_PDK1 Catalytic do 100.0 6E-36 1.3E-40 329.4 24.3 279 669-958 1-280 (280)
230 cd08217 STKc_Nek2 Catalytic do 100.0 1.6E-35 3.4E-40 322.9 27.3 256 670-958 1-265 (265)
231 cd06659 STKc_PAK6 Catalytic do 100.0 6.3E-36 1.4E-40 333.4 24.5 257 669-962 21-278 (297)
232 cd06633 STKc_TAO3 Catalytic do 100.0 2.9E-35 6.4E-40 330.6 30.0 257 670-963 22-281 (313)
233 cd05105 PTKc_PDGFR_alpha Catal 100.0 1E-35 2.2E-40 344.1 26.9 260 663-949 31-391 (400)
234 PHA03390 pk1 serine/threonine- 100.0 9.6E-36 2.1E-40 326.6 25.3 248 669-960 14-267 (267)
235 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2E-35 4.3E-40 327.5 28.1 258 669-961 1-272 (287)
236 cd06647 STKc_PAK_I Catalytic d 100.0 5.1E-36 1.1E-40 333.4 23.2 257 668-961 18-275 (293)
237 cd05062 PTKc_IGF-1R Catalytic 100.0 1.3E-35 2.8E-40 327.2 26.0 257 666-954 3-273 (277)
238 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-35 3.1E-40 328.7 26.3 272 670-972 1-283 (288)
239 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-35 3.7E-40 328.6 26.9 256 668-958 4-291 (291)
240 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-35 3.3E-40 322.5 25.9 251 667-954 2-253 (256)
241 cd07835 STKc_CDK1_like Catalyt 100.0 1.2E-35 2.7E-40 328.1 25.4 255 671-958 1-283 (283)
242 cd05148 PTKc_Srm_Brk Catalytic 100.0 9.6E-36 2.1E-40 324.8 24.3 251 668-950 5-256 (261)
243 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-35 2.9E-40 324.8 25.4 253 669-948 2-258 (267)
244 cd07831 STKc_MOK Catalytic dom 100.0 1.8E-35 4E-40 326.3 26.5 251 671-958 1-282 (282)
245 cd07842 STKc_CDK8_like Catalyt 100.0 1E-35 2.3E-40 334.1 25.0 260 670-958 1-316 (316)
246 cd05068 PTKc_Frk_like Catalyti 100.0 1.8E-35 4E-40 322.9 26.1 250 666-947 3-253 (261)
247 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-35 4.7E-40 327.4 27.1 253 666-947 2-271 (288)
248 cd07833 STKc_CDKL Catalytic do 100.0 1.3E-35 2.8E-40 328.5 25.3 257 669-958 1-288 (288)
249 cd07843 STKc_CDC2L1 Catalytic 100.0 1.4E-35 2.9E-40 329.8 25.5 257 668-958 4-293 (293)
250 cd06616 PKc_MKK4 Catalytic dom 100.0 8.3E-36 1.8E-40 330.5 23.4 262 668-964 3-276 (288)
251 KOG0194 Protein tyrosine kinas 100.0 2.7E-36 5.9E-41 342.0 19.8 262 661-951 149-416 (474)
252 cd08215 STKc_Nek Catalytic dom 100.0 2.9E-35 6.2E-40 319.3 27.0 256 670-958 1-258 (258)
253 cd07849 STKc_ERK1_2_like Catal 100.0 9.9E-36 2.1E-40 337.8 24.2 260 668-961 4-298 (336)
254 cd07836 STKc_Pho85 Catalytic d 100.0 1.8E-35 3.9E-40 326.9 25.6 255 670-958 1-284 (284)
255 cd05108 PTKc_EGFR Catalytic do 100.0 1.6E-35 3.5E-40 333.1 25.5 255 666-950 4-263 (316)
256 cd06635 STKc_TAO1 Catalytic do 100.0 4.1E-35 8.9E-40 330.0 28.7 255 669-960 25-282 (317)
257 cd06641 STKc_MST3 Catalytic do 100.0 2.4E-35 5.2E-40 325.1 26.2 254 670-960 5-258 (277)
258 cd07865 STKc_CDK9 Catalytic do 100.0 2.1E-35 4.5E-40 330.6 26.1 261 668-958 11-310 (310)
259 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-35 4.5E-40 325.2 25.6 258 665-954 2-273 (277)
260 cd05071 PTKc_Src Catalytic dom 100.0 2.3E-35 5E-40 322.5 25.8 248 666-946 3-251 (262)
261 cd08226 PK_STRAD_beta Pseudoki 100.0 1.5E-35 3.2E-40 335.2 25.0 262 675-961 4-314 (328)
262 cd06614 STKc_PAK Catalytic dom 100.0 2.4E-35 5.1E-40 326.6 26.1 258 668-961 18-276 (286)
263 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.8E-35 1E-39 320.2 28.2 259 669-958 2-264 (264)
264 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.4E-35 5.2E-40 321.7 25.6 252 665-953 2-254 (260)
265 cd05090 PTKc_Ror1 Catalytic do 100.0 2.6E-35 5.6E-40 325.8 26.2 256 667-954 3-278 (283)
266 cd07834 STKc_MAPK Catalytic do 100.0 1.3E-35 2.7E-40 336.0 24.2 260 670-961 1-295 (330)
267 KOG0666 Cyclin C-dependent kin 100.0 9.3E-37 2E-41 314.6 13.3 264 668-961 23-343 (438)
268 cd05055 PTKc_PDGFR Catalytic d 100.0 2.9E-35 6.4E-40 328.8 26.7 257 665-948 31-294 (302)
269 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.2E-35 4.8E-40 322.0 24.9 252 665-953 2-254 (260)
270 cd06624 STKc_ASK Catalytic dom 100.0 5.2E-35 1.1E-39 320.6 27.5 255 669-958 8-268 (268)
271 cd07855 STKc_ERK5 Catalytic do 100.0 1.2E-35 2.6E-40 336.8 22.9 263 669-962 5-301 (334)
272 cd05059 PTKc_Tec_like Catalyti 100.0 2.9E-35 6.2E-40 320.5 24.9 250 668-954 3-253 (256)
273 cd05053 PTKc_FGFR Catalytic do 100.0 2.6E-35 5.6E-40 327.4 24.9 261 662-954 5-286 (293)
274 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.9E-35 6.2E-40 320.6 24.7 252 667-955 2-254 (256)
275 cd05088 PTKc_Tie2 Catalytic do 100.0 2.5E-35 5.4E-40 329.6 24.7 255 666-955 4-276 (303)
276 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.3E-35 1.4E-39 319.2 27.2 252 669-947 2-257 (267)
277 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.6E-35 1E-39 322.8 26.1 257 667-955 4-274 (277)
278 cd05033 PTKc_EphR Catalytic do 100.0 6.1E-35 1.3E-39 319.7 26.8 254 668-954 3-260 (266)
279 cd05082 PTKc_Csk Catalytic dom 100.0 4E-35 8.8E-40 319.2 25.1 247 665-953 2-250 (256)
280 cd05084 PTKc_Fes Catalytic dom 100.0 7.3E-35 1.6E-39 316.2 27.0 246 675-953 1-247 (252)
281 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.2E-35 9.1E-40 333.5 26.0 259 668-961 4-306 (342)
282 cd07851 STKc_p38 Catalytic dom 100.0 2.7E-35 5.9E-40 335.2 24.4 255 668-961 14-304 (343)
283 cd05123 STKc_AGC Catalytic dom 100.0 5.3E-35 1.2E-39 316.5 25.5 250 677-958 1-250 (250)
284 cd05091 PTKc_Ror2 Catalytic do 100.0 3.8E-35 8.3E-40 324.3 24.9 257 666-954 2-278 (283)
285 cd08216 PK_STRAD Pseudokinase 100.0 3.8E-35 8.3E-40 329.5 25.1 256 681-961 12-301 (314)
286 cd05034 PTKc_Src_like Catalyti 100.0 7.3E-35 1.6E-39 317.9 26.1 253 665-953 2-255 (261)
287 cd06634 STKc_TAO2 Catalytic do 100.0 7.4E-35 1.6E-39 326.5 26.8 257 668-961 14-273 (308)
288 cd06657 STKc_PAK4 Catalytic do 100.0 6.4E-35 1.4E-39 324.4 26.1 254 671-961 22-276 (292)
289 cd06606 STKc_MAPKKK Catalytic 100.0 1.1E-34 2.4E-39 314.5 27.2 257 670-958 1-260 (260)
290 cd05051 PTKc_DDR Catalytic dom 100.0 6.5E-35 1.4E-39 324.6 25.8 256 667-953 3-291 (296)
291 cd05069 PTKc_Yes Catalytic dom 100.0 7.5E-35 1.6E-39 317.9 25.8 251 666-953 3-254 (260)
292 cd05035 PTKc_Axl_like Catalyti 100.0 9.1E-35 2E-39 319.0 26.3 253 671-954 1-267 (273)
293 cd05116 PTKc_Syk Catalytic dom 100.0 1.2E-34 2.5E-39 315.9 26.8 248 676-952 2-252 (257)
294 cd07838 STKc_CDK4_6_like Catal 100.0 8.4E-35 1.8E-39 321.7 26.0 254 671-958 1-287 (287)
295 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.7E-35 1.9E-39 336.2 27.2 260 664-954 32-394 (401)
296 cd05122 PKc_STE Catalytic doma 100.0 1.6E-34 3.5E-39 312.0 27.5 252 670-957 1-253 (253)
297 cd05092 PTKc_TrkA Catalytic do 100.0 9.4E-35 2E-39 321.0 26.0 253 666-947 2-273 (280)
298 KOG1026 Nerve growth factor re 100.0 8.1E-36 1.8E-40 347.5 18.2 256 665-948 482-755 (774)
299 cd00192 PTKc Catalytic domain 100.0 1.3E-34 2.8E-39 315.0 26.6 249 675-955 1-260 (262)
300 cd06627 STKc_Cdc7_like Catalyt 100.0 2.1E-34 4.5E-39 312.2 28.1 254 670-958 1-254 (254)
301 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.7E-35 1.9E-39 325.7 25.8 260 664-951 13-295 (307)
302 cd05094 PTKc_TrkC Catalytic do 100.0 9.6E-35 2.1E-39 322.7 25.8 257 667-952 3-279 (291)
303 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-34 2.9E-39 327.3 27.4 254 668-960 9-293 (328)
304 cd07879 STKc_p38delta_MAPK13 C 100.0 4.9E-35 1.1E-39 333.0 23.9 257 668-964 14-306 (342)
305 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-34 2.3E-39 318.1 25.7 254 667-948 2-259 (267)
306 cd05039 PTKc_Csk_like Catalyti 100.0 1.7E-34 3.7E-39 314.1 27.1 245 666-947 3-248 (256)
307 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.5E-35 1.4E-39 332.3 24.8 254 668-960 16-305 (345)
308 cd05075 PTKc_Axl Catalytic dom 100.0 1.5E-34 3.2E-39 317.5 26.7 253 671-954 1-266 (272)
309 cd08530 STKc_CNK2-like Catalyt 100.0 1.2E-34 2.6E-39 314.6 25.8 254 670-958 1-256 (256)
310 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.2E-35 1.8E-39 331.2 25.3 259 666-955 4-335 (343)
311 cd05040 PTKc_Ack_like Catalyti 100.0 1.8E-34 4E-39 313.9 26.8 248 675-953 1-252 (257)
312 cd05109 PTKc_HER2 Catalytic do 100.0 1.8E-34 4E-39 318.3 27.0 254 666-953 4-262 (279)
313 cd05073 PTKc_Hck Catalytic dom 100.0 2E-34 4.2E-39 314.7 26.7 250 665-947 2-252 (260)
314 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-34 3.3E-39 323.2 26.4 259 664-950 10-291 (304)
315 cd05089 PTKc_Tie1 Catalytic do 100.0 1.7E-34 3.7E-39 321.8 26.6 249 669-948 2-268 (297)
316 cd05097 PTKc_DDR_like Catalyti 100.0 1.3E-34 2.8E-39 322.3 25.5 254 667-947 3-288 (295)
317 cd05046 PTK_CCK4 Pseudokinase 100.0 1.5E-34 3.3E-39 318.0 25.6 256 667-954 3-271 (275)
318 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-34 2.9E-39 322.4 25.2 262 663-960 9-278 (296)
319 cd07857 STKc_MPK1 Catalytic do 100.0 2.9E-34 6.4E-39 325.2 28.2 260 670-960 1-297 (332)
320 PTZ00024 cyclin-dependent prot 100.0 2E-34 4.4E-39 326.9 26.9 273 669-961 8-319 (335)
321 cd05045 PTKc_RET Catalytic dom 100.0 2.7E-34 5.9E-39 318.9 27.0 251 670-948 1-279 (290)
322 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-34 2.7E-39 324.4 24.4 268 668-958 7-311 (311)
323 cd05111 PTK_HER3 Pseudokinase 100.0 3E-34 6.5E-39 316.8 27.0 253 666-948 4-261 (279)
324 cd05050 PTKc_Musk Catalytic do 100.0 2.2E-34 4.9E-39 319.1 26.1 253 667-947 3-281 (288)
325 cd07840 STKc_CDK9_like Catalyt 100.0 2E-34 4.4E-39 318.5 25.6 255 671-958 1-287 (287)
326 cd05060 PTKc_Syk_like Catalyti 100.0 3.5E-34 7.5E-39 312.0 26.9 248 675-952 1-252 (257)
327 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.8E-34 6.1E-39 314.7 26.4 254 667-948 3-260 (268)
328 cd07852 STKc_MAPK15 Catalytic 100.0 1.6E-34 3.4E-39 328.1 25.0 263 668-961 6-301 (337)
329 cd05099 PTKc_FGFR4 Catalytic d 100.0 3E-34 6.5E-39 322.5 26.9 256 664-947 7-285 (314)
330 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-34 5.1E-39 320.4 25.8 256 668-950 4-292 (296)
331 PF07714 Pkinase_Tyr: Protein 100.0 1E-34 2.2E-39 317.0 22.3 250 672-953 2-256 (259)
332 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-34 3.9E-39 322.0 24.9 259 667-958 5-302 (302)
333 cd05118 STKc_CMGC Catalytic do 100.0 1.3E-34 2.7E-39 319.6 23.1 254 671-958 1-283 (283)
334 cd05065 PTKc_EphR_B Catalytic 100.0 2.8E-34 6.2E-39 314.9 25.7 257 668-954 3-263 (269)
335 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.9E-34 6.2E-39 325.6 26.0 263 662-952 5-290 (334)
336 KOG1151 Tousled-like protein k 100.0 1.1E-35 2.4E-40 317.7 13.2 267 668-960 462-746 (775)
337 cd08222 STKc_Nek11 Catalytic d 100.0 1.7E-34 3.6E-39 314.9 22.8 256 670-958 1-260 (260)
338 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.4E-34 9.5E-39 316.0 26.2 250 669-947 3-273 (283)
339 KOG0603 Ribosomal protein S6 k 100.0 3.5E-35 7.5E-40 332.1 17.6 244 667-958 320-566 (612)
340 cd05083 PTKc_Chk Catalytic dom 100.0 3.2E-34 6.9E-39 311.8 24.2 243 666-947 3-246 (254)
341 KOG1035 eIF-2alpha kinase GCN2 100.0 3.4E-35 7.3E-40 349.3 17.6 273 667-959 477-875 (1351)
342 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.8E-34 8.3E-39 316.7 24.8 255 669-954 4-278 (284)
343 KOG4645 MAPKKK (MAP kinase kin 100.0 2E-36 4.4E-41 361.0 6.9 261 669-961 1235-1500(1509)
344 cd05115 PTKc_Zap-70 Catalytic 100.0 8.8E-34 1.9E-38 309.2 27.1 246 676-950 2-250 (257)
345 cd07829 STKc_CDK_like Catalyti 100.0 3.6E-34 7.9E-39 315.8 24.1 254 671-958 1-282 (282)
346 cd05112 PTKc_Itk Catalytic dom 100.0 6.3E-34 1.4E-38 309.5 25.6 250 668-954 3-253 (256)
347 cd05057 PTKc_EGFR_like Catalyt 100.0 9.8E-34 2.1E-38 312.5 27.1 256 666-951 4-264 (279)
348 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9E-34 1.9E-38 313.5 26.9 254 668-953 3-277 (284)
349 cd07830 STKc_MAK_like Catalyti 100.0 5.2E-34 1.1E-38 315.0 24.9 253 671-958 1-283 (283)
350 cd05085 PTKc_Fer Catalytic dom 100.0 1.8E-33 3.9E-38 304.8 27.8 246 675-951 1-247 (250)
351 smart00219 TyrKc Tyrosine kina 100.0 1.2E-33 2.5E-38 307.1 26.0 251 671-954 1-256 (258)
352 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-33 2.4E-38 312.2 26.1 255 666-948 3-269 (280)
353 KOG1095 Protein tyrosine kinas 100.0 2E-34 4.4E-39 347.5 21.8 258 666-951 689-957 (1025)
354 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-33 3.1E-38 305.7 26.3 246 675-954 1-247 (251)
355 cd05056 PTKc_FAK Catalytic dom 100.0 1.3E-33 2.8E-38 309.9 26.1 250 667-947 4-257 (270)
356 cd05047 PTKc_Tie Catalytic dom 100.0 1.7E-33 3.7E-38 309.1 26.4 244 675-949 1-262 (270)
357 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.7E-34 1E-38 311.4 21.5 238 675-954 1-255 (258)
358 cd05576 STKc_RPK118_like Catal 100.0 4.5E-34 9.8E-39 307.6 21.0 233 680-958 4-237 (237)
359 KOG1187 Serine/threonine prote 100.0 4.1E-34 8.9E-39 323.1 21.5 253 668-952 74-349 (361)
360 cd05044 PTKc_c-ros Catalytic d 100.0 1.4E-33 3E-38 309.3 23.4 245 675-947 1-262 (269)
361 cd08528 STKc_Nek10 Catalytic d 100.0 3.1E-33 6.8E-38 306.5 26.2 252 670-949 1-264 (269)
362 cd05110 PTKc_HER4 Catalytic do 100.0 3E-33 6.5E-38 312.7 26.2 256 666-951 4-264 (303)
363 cd05042 PTKc_Aatyk Catalytic d 100.0 3.7E-33 8E-38 306.1 26.3 245 675-947 1-262 (269)
364 cd05058 PTKc_Met_Ron Catalytic 100.0 5.5E-33 1.2E-37 303.2 27.1 248 675-953 1-253 (262)
365 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.5E-33 7.6E-38 308.3 24.9 257 668-951 3-279 (284)
366 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4E-33 8.6E-38 305.0 25.0 239 675-955 1-260 (262)
367 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.6E-33 1.2E-37 304.8 26.0 247 675-953 1-264 (269)
368 KOG0668 Casein kinase II, alph 100.0 2.9E-34 6.3E-39 284.6 13.8 255 667-964 36-331 (338)
369 KOG1006 Mitogen-activated prot 100.0 3.6E-35 7.7E-40 297.3 6.8 263 665-962 60-334 (361)
370 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.1E-33 1.3E-37 305.6 25.1 238 676-955 2-272 (274)
371 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.2E-33 1.5E-37 304.3 25.2 252 671-953 1-266 (273)
372 KOG0665 Jun-N-terminal kinase 100.0 2.7E-34 5.8E-39 299.0 12.9 264 668-972 16-325 (369)
373 KOG1290 Serine/threonine prote 100.0 2.5E-33 5.5E-38 305.1 20.9 142 659-805 68-222 (590)
374 KOG0587 Traf2- and Nck-interac 100.0 1.3E-33 2.9E-38 326.5 19.6 259 668-961 18-288 (953)
375 PHA02882 putative serine/threo 100.0 9E-33 1.9E-37 307.5 25.8 259 666-954 9-291 (294)
376 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.9E-33 1.5E-37 301.6 24.3 236 675-954 1-256 (259)
377 KOG0670 U4/U6-associated splic 100.0 1.5E-34 3.2E-39 315.3 10.0 257 666-960 429-751 (752)
378 KOG0669 Cyclin T-dependent kin 100.0 5.7E-35 1.2E-39 293.2 5.4 265 666-960 14-320 (376)
379 KOG4278 Protein tyrosine kinas 100.0 2.2E-33 4.9E-38 310.2 18.0 255 662-947 260-515 (1157)
380 cd05086 PTKc_Aatyk2 Catalytic 100.0 3E-32 6.5E-37 299.0 26.4 247 675-953 1-263 (268)
381 KOG0199 ACK and related non-re 100.0 2.6E-33 5.7E-38 314.5 17.0 259 667-953 108-370 (1039)
382 KOG4250 TANK binding protein k 100.0 2.7E-33 5.8E-38 318.7 15.9 245 669-943 13-296 (732)
383 PLN03225 Serine/threonine-prot 100.0 1.6E-32 3.5E-37 328.8 22.2 263 666-967 129-462 (566)
384 KOG4257 Focal adhesion tyrosin 100.0 8.1E-33 1.8E-37 306.9 17.7 253 665-948 385-642 (974)
385 KOG1094 Discoidin domain recep 100.0 1.4E-32 3E-37 303.9 17.2 253 665-945 534-794 (807)
386 KOG0664 Nemo-like MAPK-related 100.0 6.8E-34 1.5E-38 288.0 4.9 263 670-966 54-354 (449)
387 PLN03224 probable serine/threo 100.0 3E-31 6.5E-36 310.0 25.5 266 665-960 141-505 (507)
388 smart00220 S_TKc Serine/Threon 100.0 4.7E-31 1E-35 282.7 24.5 242 681-958 1-244 (244)
389 KOG0196 Tyrosine kinase, EPH ( 100.0 1.6E-32 3.5E-37 312.6 12.4 260 661-948 621-884 (996)
390 KOG1167 Serine/threonine prote 100.0 1.2E-31 2.6E-36 289.7 13.1 280 668-961 35-387 (418)
391 KOG0984 Mitogen-activated prot 100.0 4.7E-31 1E-35 258.6 13.8 224 662-916 39-271 (282)
392 PRK13560 hypothetical protein; 100.0 2E-29 4.4E-34 319.7 28.4 411 168-620 183-620 (807)
393 KOG1027 Serine/threonine prote 100.0 5.2E-31 1.1E-35 303.8 11.6 252 670-960 510-772 (903)
394 KOG0576 Mitogen-activated prot 100.0 3.3E-31 7.1E-36 297.7 7.8 276 668-979 14-300 (829)
395 KOG1025 Epidermal growth facto 100.0 7.4E-30 1.6E-34 291.5 18.1 253 670-952 697-954 (1177)
396 KOG1152 Signal transduction se 100.0 2.3E-30 5E-35 286.3 10.6 202 668-900 560-771 (772)
397 KOG0200 Fibroblast/platelet-de 100.0 1.2E-28 2.7E-33 298.1 23.3 264 663-955 290-579 (609)
398 PLN00113 leucine-rich repeat r 100.0 7.7E-29 1.7E-33 320.0 20.0 239 669-951 690-947 (968)
399 KOG3653 Transforming growth fa 100.0 2.7E-28 5.7E-33 265.9 16.7 244 667-946 208-494 (534)
400 KOG2052 Activin A type IB rece 100.0 4.9E-28 1.1E-32 262.0 17.8 243 669-945 211-493 (513)
401 PRK09776 putative diguanylate 99.9 1.1E-27 2.5E-32 313.6 17.2 380 176-594 270-659 (1092)
402 cd00180 PKc Catalytic domain o 99.9 3.8E-26 8.2E-31 238.3 23.5 213 677-956 1-215 (215)
403 smart00221 STYKc Protein kinas 99.9 1.3E-25 2.9E-30 238.2 22.4 215 671-914 1-218 (225)
404 KOG1345 Serine/threonine kinas 99.9 1.1E-26 2.4E-31 236.3 11.2 254 668-959 23-291 (378)
405 KOG1024 Receptor-like protein 99.9 2.3E-25 4.9E-30 236.7 18.5 255 665-947 280-547 (563)
406 PLN00181 protein SPA1-RELATED; 99.9 3.1E-26 6.8E-31 288.2 13.3 221 726-961 29-271 (793)
407 TIGR02040 PpsR-CrtJ transcript 99.9 1.2E-25 2.6E-30 264.8 16.0 363 195-593 2-368 (442)
408 KOG0603 Ribosomal protein S6 k 99.9 8.5E-27 1.8E-31 264.3 5.4 264 676-981 1-269 (612)
409 KOG1163 Casein kinase (serine/ 99.9 1E-24 2.2E-29 218.7 14.3 274 665-966 11-301 (341)
410 KOG1165 Casein kinase (serine/ 99.9 5.9E-24 1.3E-28 222.3 16.2 223 663-912 22-253 (449)
411 KOG1164 Casein kinase (serine/ 99.9 3.9E-23 8.4E-28 232.7 23.5 252 670-945 19-287 (322)
412 PRK13560 hypothetical protein; 99.9 1.7E-23 3.7E-28 265.5 22.0 380 175-593 53-469 (807)
413 smart00750 KIND kinase non-cat 99.9 6E-24 1.3E-28 217.6 12.8 161 754-959 1-169 (176)
414 KOG0606 Microtubule-associated 99.9 4.8E-24 1E-28 252.1 11.4 242 669-966 83-326 (1205)
415 KOG0590 Checkpoint kinase and 99.9 1.3E-24 2.9E-29 259.6 6.5 261 672-962 321-592 (601)
416 COG0515 SPS1 Serine/threonine 99.9 1.1E-21 2.4E-26 218.5 26.6 262 671-960 2-280 (384)
417 PRK09188 serine/threonine prot 99.9 1E-22 2.2E-27 228.9 16.5 177 664-872 13-194 (365)
418 PRK11359 cyclic-di-GMP phospho 99.9 4.1E-20 8.9E-25 234.5 26.5 241 186-592 9-254 (799)
419 KOG1240 Protein kinase contain 99.9 4.2E-22 9.1E-27 235.4 6.8 266 670-973 24-316 (1431)
420 TIGR02938 nifL_nitrog nitrogen 99.8 4.4E-21 9.4E-26 228.8 13.8 245 188-596 3-258 (494)
421 PRK10359 lipopolysaccharide co 99.8 8.3E-21 1.8E-25 198.7 11.5 176 666-893 28-217 (232)
422 cd05147 RIO1_euk RIO kinase fa 99.8 3.6E-20 7.9E-25 191.7 13.0 141 674-820 2-166 (190)
423 PF14531 Kinase-like: Kinase-l 99.8 1.7E-20 3.8E-25 202.0 10.8 236 670-942 13-288 (288)
424 KOG0195 Integrin-linked kinase 99.8 5.6E-20 1.2E-24 187.2 8.9 245 666-947 187-438 (448)
425 cd05145 RIO1_like RIO kinase f 99.8 6.2E-19 1.4E-23 183.0 15.8 143 673-822 1-168 (190)
426 PRK12274 serine/threonine prot 99.8 8.8E-19 1.9E-23 179.5 15.6 203 671-902 4-211 (218)
427 KOG1166 Mitotic checkpoint ser 99.8 4.8E-19 1E-23 215.2 11.4 198 665-896 694-901 (974)
428 PRK10345 hypothetical protein; 99.8 6.7E-18 1.4E-22 176.5 15.2 136 672-818 5-156 (210)
429 KOG4158 BRPK/PTEN-induced prot 99.7 1.6E-17 3.5E-22 177.7 13.7 205 727-958 274-516 (598)
430 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.1E-18 6.7E-23 191.6 5.3 185 742-958 329-515 (516)
431 smart00090 RIO RIO-like kinase 99.7 4.1E-17 8.9E-22 174.7 13.7 145 670-821 29-198 (237)
432 KOG0606 Microtubule-associated 99.7 1.5E-17 3.2E-22 197.6 7.5 298 667-967 802-1104(1205)
433 PRK14879 serine/threonine prot 99.7 4.3E-16 9.2E-21 164.5 15.7 138 674-820 1-143 (211)
434 TIGR03724 arch_bud32 Kae1-asso 99.7 5.9E-16 1.3E-20 161.9 14.8 133 676-820 1-138 (199)
435 cd05144 RIO2_C RIO kinase fami 99.7 8.1E-16 1.8E-20 160.8 13.3 139 670-821 16-175 (198)
436 KOG0590 Checkpoint kinase and 99.6 1.9E-17 4.2E-22 198.3 -0.9 264 668-960 19-291 (601)
437 PF13426 PAS_9: PAS domain; PD 99.6 4.8E-15 1E-19 136.7 14.4 104 199-305 1-104 (104)
438 PRK09605 bifunctional UGMP fam 99.6 2.4E-15 5.2E-20 181.0 16.0 139 669-820 333-476 (535)
439 PF13426 PAS_9: PAS domain; PD 99.6 5.1E-15 1.1E-19 136.5 13.3 104 482-588 1-104 (104)
440 cd05119 RIO RIO kinase family, 99.6 5.8E-15 1.2E-19 152.7 13.3 140 673-822 1-165 (187)
441 KOG1023 Natriuretic peptide re 99.6 1.1E-14 2.3E-19 166.9 13.4 199 723-947 1-216 (484)
442 PRK01723 3-deoxy-D-manno-octul 99.6 2.9E-14 6.2E-19 153.1 15.0 137 675-820 37-191 (239)
443 cd05120 APH_ChoK_like Aminogly 99.5 6.7E-14 1.4E-18 138.3 12.8 132 673-820 2-138 (155)
444 PF08448 PAS_4: PAS fold; Int 99.5 2.1E-13 4.4E-18 127.2 12.6 110 195-308 1-110 (110)
445 KOG0601 Cyclin-dependent kinas 99.5 1.9E-14 4.2E-19 164.6 6.2 263 666-961 111-385 (524)
446 PF08448 PAS_4: PAS fold; Int 99.5 1.7E-13 3.7E-18 127.8 11.2 110 478-591 1-110 (110)
447 PF00989 PAS: PAS fold; Inter 99.5 3.4E-13 7.3E-18 126.5 12.8 112 189-303 1-113 (113)
448 PRK09776 putative diguanylate 99.5 2.9E-14 6.3E-19 187.4 6.7 267 168-470 389-663 (1092)
449 PF00989 PAS: PAS fold; Inter 99.5 4.3E-13 9.3E-18 125.7 11.7 111 473-586 2-113 (113)
450 PRK13559 hypothetical protein; 99.4 3.4E-12 7.4E-17 146.4 17.7 122 472-593 43-164 (361)
451 PRK13557 histidine kinase; Pro 99.4 4.8E-12 1E-16 153.1 19.1 133 182-314 23-155 (540)
452 PRK13557 histidine kinase; Pro 99.4 2.3E-12 5E-17 155.9 15.4 148 472-619 30-177 (540)
453 PRK13559 hypothetical protein; 99.4 8.9E-12 1.9E-16 143.0 19.0 129 186-314 40-168 (361)
454 PRK11091 aerobic respiration c 99.4 2.1E-12 4.6E-17 163.4 14.3 142 171-315 137-278 (779)
455 PRK11091 aerobic respiration c 99.4 4.2E-12 9E-17 160.8 15.6 135 456-593 138-273 (779)
456 TIGR01982 UbiB 2-polyprenylphe 99.4 1.9E-12 4.2E-17 150.8 11.5 144 674-822 122-308 (437)
457 PRK04750 ubiB putative ubiquin 99.3 5.5E-13 1.2E-17 156.9 5.3 186 629-822 80-315 (537)
458 KOG1266 Protein kinase [Signal 99.3 3.9E-12 8.4E-17 134.2 8.0 211 722-964 120-340 (458)
459 PRK13558 bacterio-opsin activa 99.3 7.1E-11 1.5E-15 146.9 17.4 128 188-315 147-274 (665)
460 KOG0601 Cyclin-dependent kinas 99.3 4.8E-12 1E-16 145.2 5.9 253 665-959 261-518 (524)
461 cd05151 ChoK Choline Kinase (C 99.2 2.7E-11 5.9E-16 123.0 10.7 127 674-819 3-135 (170)
462 cd05146 RIO3_euk RIO kinase fa 99.2 1.4E-10 3E-15 119.3 14.9 140 674-821 2-174 (197)
463 PRK10060 RNase II stability mo 99.2 1E-10 2.2E-15 144.6 16.1 153 174-330 96-255 (663)
464 KOG1243 Protein kinase [Genera 99.2 1.9E-10 4E-15 133.1 16.8 226 687-966 30-257 (690)
465 KOG3087 Serine/threonine prote 99.2 1.7E-10 3.7E-15 113.4 12.4 146 673-820 11-165 (229)
466 PRK13558 bacterio-opsin activa 99.2 2.9E-10 6.2E-15 141.4 17.5 121 474-594 150-270 (665)
467 TIGR02040 PpsR-CrtJ transcript 99.2 9.6E-11 2.1E-15 138.3 11.8 132 170-311 236-369 (442)
468 PRK10060 RNase II stability mo 99.1 6.2E-10 1.4E-14 137.6 17.0 115 474-592 113-229 (663)
469 COG3642 Mn2+-dependent serine/ 99.1 9E-10 1.9E-14 109.3 13.8 134 675-820 2-140 (204)
470 TIGR00229 sensory_box PAS doma 99.1 9.2E-10 2E-14 100.1 13.3 120 189-312 3-123 (124)
471 TIGR02938 nifL_nitrog nitrogen 99.1 1.8E-10 3.8E-15 137.5 10.7 116 474-592 6-121 (494)
472 PF08447 PAS_3: PAS fold; Int 99.1 5.1E-10 1.1E-14 100.9 10.0 86 497-583 1-91 (91)
473 PRK11359 cyclic-di-GMP phospho 99.0 1.1E-09 2.4E-14 139.3 14.4 141 167-314 118-259 (799)
474 TIGR00229 sensory_box PAS doma 99.0 2.3E-09 4.9E-14 97.5 11.8 115 474-592 5-120 (124)
475 cd05154 ACAD10_11_like Acyl-Co 99.0 2.8E-09 6E-14 113.1 11.9 140 675-820 4-206 (223)
476 PF08447 PAS_3: PAS fold; Int 99.0 4.1E-09 8.9E-14 95.0 10.2 86 214-300 1-91 (91)
477 KOG3741 Poly(A) ribonuclease s 98.9 3.9E-08 8.4E-13 110.6 18.2 204 682-941 289-512 (655)
478 PRK15123 lipopolysaccharide co 98.9 3.7E-08 8E-13 107.1 16.6 134 684-819 37-193 (268)
479 COG3829 RocR Transcriptional r 98.9 2.4E-08 5.2E-13 113.8 14.7 221 192-591 4-224 (560)
480 PF01163 RIO1: RIO1 family; I 98.9 2.1E-08 4.6E-13 102.9 12.5 127 684-820 1-155 (188)
481 cd00130 PAS PAS domain; PAS mo 98.8 9.5E-08 2.1E-12 82.4 14.0 103 481-586 1-103 (103)
482 cd00130 PAS PAS domain; PAS mo 98.8 1.8E-07 4E-12 80.5 14.0 103 198-303 1-103 (103)
483 PRK11073 glnL nitrogen regulat 98.8 2.8E-08 6E-13 113.4 11.0 113 473-595 8-120 (348)
484 PRK11360 sensory histidine kin 98.7 8.2E-08 1.8E-12 117.6 15.1 140 473-618 263-403 (607)
485 TIGR02966 phoR_proteo phosphat 98.7 4.6E-08 1E-12 110.2 11.4 114 185-314 2-115 (333)
486 COG4248 Uncharacterized protei 98.7 2.7E-07 5.8E-12 101.3 16.4 236 673-947 15-292 (637)
487 KOG2137 Protein kinase [Signal 98.7 6.7E-09 1.4E-13 121.0 4.1 169 778-969 106-279 (700)
488 PRK11073 glnL nitrogen regulat 98.7 1.2E-07 2.6E-12 108.2 14.3 118 187-314 5-122 (348)
489 PRK11360 sensory histidine kin 98.7 2E-07 4.3E-12 114.2 16.7 128 182-315 255-383 (607)
490 PF13596 PAS_10: PAS domain; P 98.7 9.6E-08 2.1E-12 89.0 10.0 106 191-304 1-106 (106)
491 TIGR02966 phoR_proteo phosphat 98.7 9.5E-08 2.1E-12 107.6 11.0 103 473-591 7-109 (333)
492 KOG0501 K+-channel KCNQ [Inorg 98.6 2.9E-07 6.2E-12 103.2 12.9 119 474-592 16-139 (971)
493 COG0478 RIO-like serine/threon 98.6 3.3E-07 7.3E-12 96.4 12.2 138 671-820 93-251 (304)
494 PF06176 WaaY: Lipopolysacchar 98.6 5.6E-07 1.2E-11 93.2 13.3 142 665-819 27-182 (229)
495 PF12860 PAS_7: PAS fold 98.6 1.9E-07 4.1E-12 88.4 9.3 105 195-311 1-115 (115)
496 PF06293 Kdo: Lipopolysacchari 98.6 6.2E-07 1.3E-11 94.3 13.8 105 714-820 56-170 (206)
497 PRK09902 hypothetical protein; 98.6 8.4E-07 1.8E-11 91.6 13.8 140 678-820 27-179 (216)
498 KOG0501 K+-channel KCNQ [Inorg 98.5 3.2E-07 6.9E-12 102.8 10.2 120 190-309 15-139 (971)
499 PF12860 PAS_7: PAS fold 98.5 3.3E-07 7.2E-12 86.7 8.7 104 478-593 1-114 (115)
500 PF13596 PAS_10: PAS domain; P 98.5 4.5E-07 9.8E-12 84.4 9.1 106 474-587 1-106 (106)
No 1
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-54 Score=462.37 Aligned_cols=336 Identities=54% Similarity=0.968 Sum_probs=293.1
Q ss_pred CCCCCCCCCchhHHHhhc-ccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHH
Q 001865 643 PKPHRKDSPPWKAIQKIL-DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE 721 (1002)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~-~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~ 721 (1002)
.+||.....-|.....+. .....+..++|++++.||.|.-|+||+|+...++..+|+|++.+..+.......+...|.+
T Consensus 50 ~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~e 129 (459)
T KOG0610|consen 50 NKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTERE 129 (459)
T ss_pred CCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHH
Confidence 446666666777776665 4667788999999999999999999999999999999999999998888888999999999
Q ss_pred HHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001865 722 ILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 722 il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~N 801 (1002)
||..++||.++.||..|+.+.+.|+|||||+||+|..++++++.+.+++..+++|+..++.||+|||-.|||.|||||+|
T Consensus 130 IL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN 209 (459)
T KOG0610|consen 130 ILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN 209 (459)
T ss_pred HHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcc----------------------h-hhhhc---ccC--CCCCccccccc-
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT----------------------N-EKKRR---HKG--QQNPVFMAEPM- 852 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~----------------------~-~~~~~---~~~--~~~~~~~~~~~- 852 (1002)
|||.++|++.|+||.++......+....... . ..++. ... ...+..+..+.
T Consensus 210 ILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~ 289 (459)
T KOG0610|consen 210 ILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTG 289 (459)
T ss_pred eEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCC
Confidence 9999999999999999976543332221100 0 00000 000 00112223333
Q ss_pred ccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Q 001865 853 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMY 932 (1002)
Q Consensus 853 ~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~ 932 (1002)
..+.+++||-.|+|||++.|..++.++|+|.||+++|||++|..||.|.+..+.+.+|+.....+|..+..+..+++||+
T Consensus 290 ~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr 369 (459)
T KOG0610|consen 290 ARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIR 369 (459)
T ss_pred ccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 933 RLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 933 ~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
++|.+||.+|+.+...|.||.+||||++++|+++++..||+++.|.
T Consensus 370 ~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~ 415 (459)
T KOG0610|consen 370 KLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPV 415 (459)
T ss_pred HHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCcc
Confidence 9999999999999999999999999999999999999999987664
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.3e-53 Score=468.84 Aligned_cols=319 Identities=42% Similarity=0.707 Sum_probs=269.6
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|+++++||+|+||.||+|+-+.||.+||+|++++..+.....+..+..|..+|...++|+||++|..|++..++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 45678999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||||++||++..+|.+. ..|++..+++|+.+++.|+..||+.|+|||||||+|+||+..|++||+|||++.-+...
T Consensus 217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999999874 56999999999999999999999999999999999999999999999999999654432
Q ss_pred CCCCCCcch--hhhhcc--cCCCCC----------------cccccccccccccccCCcccccccccCCCCCChhhHHHH
Q 001865 825 PQLLLPTTN--EKKRRH--KGQQNP----------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 884 (1002)
Q Consensus 825 ~~~~~~~~~--~~~~~~--~~~~~~----------------~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSl 884 (1002)
......... ...... .....+ .+.........+.+|||.|||||++.+..|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 221100000 000000 000000 000112233456799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 885 GILLYEMLYGYTPFRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 885 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
|||+||||.|.+||.+.+..+.+++|+... +.+|....++.++++||.+||+ ||++|+. ...++||.+||||++++
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccCC
Confidence 999999999999999999999999999765 7888888899999999999999 9999998 56799999999999999
Q ss_pred hhhhhccCCCCCCCCCC----CCcccccccc
Q 001865 963 WALVRCMNPPELDAPLF----ATDTEKEYKV 989 (1002)
Q Consensus 963 ~~~~~~~~~~~~~~p~~----~~~~~~~~~~ 989 (1002)
|+.++.+.+| .+|.+ .|..+++|.+
T Consensus 453 W~~l~~~~ap--fvP~v~~~~DT~yFddF~e 481 (550)
T KOG0605|consen 453 WDHLREMPAP--FVPQVNSELDTQYFDDFPE 481 (550)
T ss_pred cchhhcCCCC--CCCCCCCcccccccccCcc
Confidence 9999998887 55754 4444445544
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-53 Score=451.26 Aligned_cols=283 Identities=45% Similarity=0.771 Sum_probs=256.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||.|+||+||.|+.+.+++.||+|+++|..+...........|..||..++||+||.++..|++...+|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 45679999999999999999999999999999999999988888878889999999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|+||+.||.|+..|+++ +.+++..++.|+..|+.||.|||++|||||||||+|||++.+|+++|+|||+++..-.
T Consensus 102 lVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~-- 177 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK-- 177 (357)
T ss_pred EEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc--
Confidence 999999999999999875 5699999999999999999999999999999999999999999999999999964211
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......++|||+.|||||++.+.+|+..+|+||||+++|+|++|.+||.+.+..+
T Consensus 178 -------------------------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~ 232 (357)
T KOG0598|consen 178 -------------------------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK 232 (357)
T ss_pred -------------------------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH
Confidence 1123456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.+.+|+++....+.. ..+.++++||+++|..||++|......+.+|.+||||++++|+.+.....+.+..|.
T Consensus 233 ~~~~I~~~k~~~~p~-~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~ 304 (357)
T KOG0598|consen 233 MYDKILKGKLPLPPG-YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPN 304 (357)
T ss_pred HHHHHhcCcCCCCCc-cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecC
Confidence 999999987443322 268899999999999999999875566999999999999999999777666666674
No 4
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6e-52 Score=425.77 Aligned_cols=289 Identities=44% Similarity=0.806 Sum_probs=261.2
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
...++|+.++.||.|+||.|.+++++.+|.+||+|++.+..+....+.+...+|..+|+.+.||+++++++.|.+.+++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 45679999999999999999999999999999999999988878888888999999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
|||||++||.|+.++++. +.+++..+++|+.||+.||+|||+++|++|||||+|||++++|++||+|||+|....
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 999999999999999874 569999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
....+.||||.|+|||++...+|+.++|.|+|||++|||+.|.+||...+...
T Consensus 196 ---------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~ 248 (355)
T KOG0616|consen 196 ---------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ 248 (355)
T ss_pred ---------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence 12346899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhh--hccCCCCCCCC----C
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELDAP----L 978 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~~p----~ 978 (1002)
++.+|+.+...+|.. .++.+++||.++|+.|-.+|.... ...++|.+||||++++|..+ +.+++|..+ | .
T Consensus 249 iY~KI~~~~v~fP~~--fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~p-p~~~~~ 325 (355)
T KOG0616|consen 249 IYEKILEGKVKFPSY--FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEP-PNIHGP 325 (355)
T ss_pred HHHHHHhCcccCCcc--cCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCC-ccccCC
Confidence 999999999999875 688999999999999999996654 47899999999999999999 455555432 2 2
Q ss_pred CCCcccccccc
Q 001865 979 FATDTEKEYKV 989 (1002)
Q Consensus 979 ~~~~~~~~~~~ 989 (1002)
..++..++|..
T Consensus 326 gdtsnfd~y~e 336 (355)
T KOG0616|consen 326 GDTSNFDDYEE 336 (355)
T ss_pred ccccccccccc
Confidence 44555555555
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-52 Score=457.04 Aligned_cols=288 Identities=39% Similarity=0.668 Sum_probs=259.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
....+|...+.||+|+|++|++|+++.+++.||||++.+..+....+...+..|..+|.+| +||.|++||..|+++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3457999999999999999999999999999999999988777777788889999999999 899999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|+||+++|+|.+++++. +.|++.-++.|+.||+.||+|||++|||||||||+|||++.||+++|+|||.|..+...
T Consensus 150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999999999885 66999999999999999999999999999999999999999999999999999887654
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
....- .+...........+++||..|.+||+|.....++.+|||+||||||+|+.|.+||.+.+..
T Consensus 228 ~~~~~--------------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney 293 (604)
T KOG0592|consen 228 QKSQE--------------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY 293 (604)
T ss_pred hcccc--------------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH
Confidence 33211 0111111111236799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCC
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 975 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~ 975 (1002)
.++++|+.-...||.. .++.+.+||.++|..||..|+| +++|.+||||.+++|..++...||.+.
T Consensus 294 liFqkI~~l~y~fp~~--fp~~a~dLv~KLLv~dp~~Rlt----~~qIk~HpFF~~Vdw~nlw~~~PP~l~ 358 (604)
T KOG0592|consen 294 LIFQKIQALDYEFPEG--FPEDARDLIKKLLVRDPSDRLT----SQQIKAHPFFEGVDWENLWQQTPPKLQ 358 (604)
T ss_pred HHHHHHHHhcccCCCC--CCHHHHHHHHHHHccCcccccc----HHHHhhCcccccCChhhhhhcCCCccc
Confidence 9999999988888765 5689999999999999999999 999999999999999999999999874
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-50 Score=454.61 Aligned_cols=257 Identities=33% Similarity=0.575 Sum_probs=241.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|+..+.||+|||+.||.+++..+|..||+|++.+..+......+.+.+|++|.+.|+|||||+++++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 57999999999999999999999999999999999988888888999999999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+|..++|..+++++ +.+++.+++.+++||+.||.|||+++|||||||..|||++.+.+|||+|||+|.....+
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~---- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD---- 171 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc----
Confidence 999999999999864 67999999999999999999999999999999999999999999999999999765422
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....+.||||+|+|||++....++..+||||+||++|.||+|++||...+..+.+.
T Consensus 172 -----------------------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~ 228 (592)
T KOG0575|consen 172 -----------------------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN 228 (592)
T ss_pred -----------------------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH
Confidence 123457899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+|......+|. .++.++++||.+||+.||.+||| ++++|.|+||+.
T Consensus 229 ~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rps----l~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 229 KIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPS----LDEVLDHPFFKS 274 (592)
T ss_pred HHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCC----HHHHhcCHhhhC
Confidence 99999888887 57999999999999999999999 999999999943
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-51 Score=438.42 Aligned_cols=261 Identities=33% Similarity=0.508 Sum_probs=229.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChH----HHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----KVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.+.|.+.+.||+|+||.|-+|..+.||+.||||++++....... ....+.+|++||++|+|||||+++++|+..++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 57899999999999999999999999999999999987554422 34456799999999999999999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC---CcEEEEeccCCcc
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCL 820 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~ 820 (1002)
.|||||||+||+|++.+-.+ +.+.+...+.+++||+.||.|||++||+||||||+|||++.+ -.+||+|||+|+.
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999999999875 558999999999999999999999999999999999999876 5799999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC---CChhhHHHHHHHHHHHHcCCCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~---~~~sDIwSlGvil~elltG~~P 897 (1002)
... .....++||||.|.|||++.+..+ ..++|||||||+||-+++|.+|
T Consensus 329 ~g~----------------------------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pP 380 (475)
T KOG0615|consen 329 SGE----------------------------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPP 380 (475)
T ss_pred ccc----------------------------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCC
Confidence 431 122357899999999999977653 3478999999999999999999
Q ss_pred CCCCChHH-HHHHHHhCCCCC--CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 898 FRGKTRQK-TFANILHKDLKF--PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 898 f~~~~~~~-~~~~i~~~~~~~--~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
|.+..... ..++|.++...+ +.+..++.++.+||.+||..||++||| +.++|+||||+...
T Consensus 381 FS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s----~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 381 FSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPS----ADEALNHPWFKDAP 444 (475)
T ss_pred cccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcC----HHHHhcChhhhccc
Confidence 98876555 788888887655 355678999999999999999999999 99999999999754
No 8
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-50 Score=427.03 Aligned_cols=263 Identities=28% Similarity=0.463 Sum_probs=234.6
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT- 742 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 742 (1002)
..+...+.+.++.||+|+.|+||+|+|+.|++.||+|++.. ..+....+++.+|+++++..+|||||.+|+.|..++
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE 151 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence 34566789999999999999999999999999999999953 346777889999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
.++|+||||++|+|.+++... +.+++..+..++.++++||.|||. ++||||||||+|||+++.|.|||||||.|..+
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGIL 229 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHh
Confidence 599999999999999999875 559999999999999999999996 89999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
..+ ...+++||..|||||.+.+..|+.++||||||++++|+++|++||...
T Consensus 230 vnS-----------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 230 VNS-----------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred hhh-----------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 311 456789999999999999999999999999999999999999999874
Q ss_pred -----ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001865 902 -----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 902 -----~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
...+.+..|..+..+-.....+|+++.+||..||++||.+|++ +.||++|||++....
T Consensus 281 ~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s----~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 281 NPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPS----AKQLLQHPFIKKFED 343 (364)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCC----HHHHhcCHHHhhccc
Confidence 5677778888765443333358999999999999999999999 999999999997543
No 9
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-49 Score=445.15 Aligned_cols=289 Identities=40% Similarity=0.753 Sum_probs=262.5
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCC
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
..+..++|+++++||+|+||+|+++..+.++++||||+++|..+.....+...+.|..|+... +||+++.++.+|++..
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 367889999999999999999999999999999999999999999999999999999999888 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
++|+||||+.||++....+ ...+++..++.|+..|+.||.|||++|||+||||.+|||++.+|++||+|||+++..-
T Consensus 443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999999544433 3569999999999999999999999999999999999999999999999999995421
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.......++||||.|||||++.+..|+.++|.|||||+||+||.|..||.|.+
T Consensus 520 ---------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 520 ---------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred ---------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 01124578999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCC
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 981 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 981 (1002)
..+.+..|+.....+|.. +|.++.++|+++|++||++|+.+- ..+++|.+||||+.++|.++..++.+....|....
T Consensus 573 Eee~FdsI~~d~~~yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~ 650 (694)
T KOG0694|consen 573 EEEVFDSIVNDEVRYPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKG 650 (694)
T ss_pred HHHHHHHHhcCCCCCCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCC
Confidence 999999999999888876 688999999999999999999963 34789999999999999999888877778887665
Q ss_pred ccc
Q 001865 982 DTE 984 (1002)
Q Consensus 982 ~~~ 984 (1002)
...
T Consensus 651 ~~D 653 (694)
T KOG0694|consen 651 PED 653 (694)
T ss_pred hhh
Confidence 543
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-46 Score=401.52 Aligned_cols=258 Identities=28% Similarity=0.498 Sum_probs=229.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|.+.+.||+|+||+||+++++.++..||||.+.+..+ .+...+.+..|+.||+.++|||||.+++++...+++|+|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 5799999999999999999999999999999999987644 556677788999999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC------CcEEEEeccCCccc
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------GHVSLTDFDLSCLT 821 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~------g~vkL~DFG~a~~~ 821 (1002)
||||.||+|.+|+.+. +.+++..++.++.||+.||++||+++||||||||+|||++.+ -.+||+|||+|+.+
T Consensus 88 MEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999999885 469999999999999999999999999999999999999865 35899999999775
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.. .....+.||+|.|||||++....|+.|+|+||+|+|+|++++|+.||...
T Consensus 166 ~~----------------------------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 166 QP----------------------------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred Cc----------------------------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 42 23455789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCC-CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 902 TRQKTFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~-~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+..+....+.++.-..+.. ...+....+|+...|+.+|..|.+ ..+-+.|+++..
T Consensus 218 t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~----~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 218 TPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRIS----FEDFFDHPFLAA 273 (429)
T ss_pred CHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCc----hHHhhhhhhccc
Confidence 9999988777665443332 224555679999999999999999 788889998876
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.1e-47 Score=389.67 Aligned_cols=259 Identities=27% Similarity=0.466 Sum_probs=222.4
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|+.+..+|+|+||+||+|+++.||+.||||.+... ..++.-.+-..+|+.+|++++|||+|.++++|.....+++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES-EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 5799999999999999999999999999999998754 334555566689999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||| .-++.+-+.+.+.+ ++...++.|+.|++.|+.|+|++++|||||||+|||++.+|.+||||||+|+.+..
T Consensus 81 E~~-dhTvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~----- 153 (396)
T KOG0593|consen 81 EYC-DHTVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA----- 153 (396)
T ss_pred eec-chHHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-----
Confidence 999 55666666665543 89999999999999999999999999999999999999999999999999987642
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
+....+.++.|.+|+|||.+.+ ..|+..+|||++||++.||++|.+.|+|.++.+.+
T Consensus 154 ----------------------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQL 211 (396)
T KOG0593|consen 154 ----------------------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQL 211 (396)
T ss_pred ----------------------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHH
Confidence 1223345688999999999988 68999999999999999999999999999998887
Q ss_pred HHHHhC-------------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~-------------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..|... .+.+|. .+..+.-+.+|+++||..||++|++ .+|+|.||||
T Consensus 212 y~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s----c~qll~H~yF 287 (396)
T KOG0593|consen 212 YLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS----CEQLLHHPYF 287 (396)
T ss_pred HHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc----HHHHhcChHH
Confidence 776542 112222 1334556789999999999999999 9999999999
Q ss_pred CCC
Q 001865 959 KGV 961 (1002)
Q Consensus 959 ~~~ 961 (1002)
.++
T Consensus 288 d~~ 290 (396)
T KOG0593|consen 288 DGF 290 (396)
T ss_pred HHH
Confidence 764
No 12
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-46 Score=417.14 Aligned_cols=264 Identities=31% Similarity=0.548 Sum_probs=240.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++.+.||.|+.|.|-+|++..||+..|||++.+...........+.+||-||+.+.||||+++|++++++.++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 46899999999999999999999999999999999887555566678899999999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
.||++||.|++++-+. +.+++..+..++.||+.||.|||..+|+||||||+|+|++..+++||+|||+|..-.
T Consensus 91 lEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~----- 163 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV----- 163 (786)
T ss_pred EEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc-----
Confidence 9999999999999774 569999999999999999999999999999999999999999999999999995532
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~-~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
+...-.+.||+|.|.|||++.|.+|. .++||||.|||||.||+|++||.+++....
T Consensus 164 -----------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L 220 (786)
T KOG0588|consen 164 -----------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL 220 (786)
T ss_pred -----------------------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence 11233467999999999999998874 599999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhh
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
+.++.++.+..|. .++.++++||.+||..||+.|+| .++|++|||+.++.-....
T Consensus 221 LlKV~~G~f~MPs--~Is~eaQdLLr~ml~VDp~~RiT----~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 221 LLKVQRGVFEMPS--NISSEAQDLLRRMLDVDPSTRIT----TEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred HHHHHcCcccCCC--cCCHHHHHHHHHHhccCcccccc----HHHHhhCchhhcCCCCChh
Confidence 9999999888884 47999999999999999999999 9999999999997665554
No 13
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.2e-46 Score=409.02 Aligned_cols=255 Identities=33% Similarity=0.545 Sum_probs=234.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|.+...||+|+||+||+++.+.+.+.||+|.+.+... .....+.+.+|++|++.++||||+.++++|+...++|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 579999999999999999999999999999999987532 3445678899999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.| +|+.++... +.++++.++.++.|++.||.|||+++|+|||+||.|||+..+|++|+||||+|+.+....
T Consensus 81 e~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t--- 154 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT--- 154 (808)
T ss_pred hhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc---
Confidence 99955 999999875 559999999999999999999999999999999999999999999999999998765322
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
....+..|||.|||||++.+.+|+..+|+|||||++||+++|++||...+....++
T Consensus 155 ------------------------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~ 210 (808)
T KOG0597|consen 155 ------------------------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVK 210 (808)
T ss_pred ------------------------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 22345679999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.|......+|. ..+..+++||+.+|.+||.+|++ +.+++.|||.++
T Consensus 211 ~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~Rlt----W~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 211 SILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLT----WTDLLGHPFWKG 256 (808)
T ss_pred HHhcCCCCCcc--cccHHHHHHHHHHhhcChhhccc----HHHHhcChHHhh
Confidence 99999888887 47889999999999999999999 999999999998
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-46 Score=382.24 Aligned_cols=257 Identities=28% Similarity=0.460 Sum_probs=224.0
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEE-EEeeCCe-E
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTH-V 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~~-~ 744 (1002)
...+|++++.||.|+||.||+|.+..+|+.+|.|.+.-+ ..+......+..|+.+|++|+|||||++++ .|..++. +
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 456899999999999999999999999999999999855 346667788899999999999999999998 5555555 8
Q ss_pred EEEEeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--cC--cccCCCCCCcEEEecCCcEEEEeccCC
Q 001865 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC--QG--IIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~--~g--IiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+||||||.+|+|..++++ ...+.+++..++.++.|++.||.++|+ .. |+||||||.||+++.+|.+||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999984 456789999999999999999999999 45 999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
+.+..+ .....+++|||.||+||.+.+.+|+.+||||||||++|||+.-++||
T Consensus 176 r~l~s~---------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF 228 (375)
T KOG0591|consen 176 RFLSSK---------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF 228 (375)
T ss_pred hHhcch---------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence 876532 12345789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 899 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.|.+-.+..++|.++..+.-.....|..+..||..|+..||+.||+..+.+.+
T Consensus 229 ~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 229 YGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred ccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 99999999999998865522223478889999999999999999984333333
No 15
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=376.16 Aligned_cols=261 Identities=30% Similarity=0.487 Sum_probs=233.4
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
...+.|.+...||+|.|+.||++.+..+|+.||+|++....+... ..+.+.+|+.|.+.|+||||+++++.+...++.|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence 345789999999999999999999999999999999876544333 6688899999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec---CCcEEEEeccCCcccC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~---~g~vkL~DFG~a~~~~ 822 (1002)
+|+|+|.|++|..-+-.+ ..+++..+-.+++||+.+|.|+|.+||||||+||.|+++.+ ..-+||+|||+|....
T Consensus 87 lvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999999997665443 45899999999999999999999999999999999999964 3359999999996654
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. ......++|||+|||||++...+|+..+|||+.||+||-|+.|++||.+.+
T Consensus 165 ~----------------------------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 165 D----------------------------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 216 (355)
T ss_pred C----------------------------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence 1 123446789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 903 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
....++.|+.+..+++ .++.+++++++|+++||..||.+|+| +.|+|+|||+...
T Consensus 217 ~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt----a~EAL~HpWi~~r 273 (355)
T KOG0033|consen 217 QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT----ADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc----HHHHhCCchhcch
Confidence 9999999999877665 46788999999999999999999999 9999999999873
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=408.98 Aligned_cols=262 Identities=34% Similarity=0.614 Sum_probs=234.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh--HHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCC
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR--NKVHRACAEREILDMLD-HPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~--~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~ 742 (1002)
...+.|.+.+.||+|+||+|+.+.+..++..||+|++.+...... .....+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 346799999999999999999999999999999998876533211 23456678999999998 999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCccc
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~ 821 (1002)
.+|+|||||.||+|++++.. .+.+.+..++.+++||+.||+|||++||+||||||+|||++.+ +++||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 99999999999999999988 3569999999999999999999999999999999999999999 99999999999664
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CC-ChhhHHHHHHHHHHHHcCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-SAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~-~~-~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
. .......+.|||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||.
T Consensus 172 ~---------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 P---------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred C---------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 2 0112345789999999999999877 75 69999999999999999999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+....+..|..+...+|.... +.++..|+.+||..||.+|++ +.+|++||||+..
T Consensus 225 d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t----~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 225 DSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRIT----LLEILEHPWFQKE 281 (370)
T ss_pred CccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCC----HHHHhhChhhccC
Confidence 99999999999999999888755 999999999999999999999 9999999999973
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=400.29 Aligned_cols=263 Identities=28% Similarity=0.470 Sum_probs=227.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCC-e
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT-H 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~-~ 743 (1002)
+..++|.++++||.|+||.||+|+.+.++..||||.+++... .-+.+- -.+|+.-|++|+ ||||+++++++.+++ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~-nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECM-NLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHH-HHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 346799999999999999999999999999999999987643 222222 357999999998 999999999999888 9
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||| ..+|+++++.+ .+.+++..++.|+.||++||+|+|++|+.||||||+|||+..+..+||+|||+|+....
T Consensus 85 L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999999 89999999987 78899999999999999999999999999999999999999889999999999987653
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
++ ..+.++.|.+|+|||+|.. ..|+.+.|+|++|||++|+++-++.|+|.+
T Consensus 163 kp----------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 163 KP----------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred CC----------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 32 2345688999999999754 568899999999999999999999999999
Q ss_pred hHHHHHHHHh--C-----------------CCCCCCC---------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 903 RQKTFANILH--K-----------------DLKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 903 ~~~~~~~i~~--~-----------------~~~~~~~---------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..+.+.+|.. + .+.+|.. +..+.++.+||.+||.+||.+||| |.|+|+
T Consensus 215 E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpT----A~~al~ 290 (538)
T KOG0661|consen 215 EIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPT----ASQALQ 290 (538)
T ss_pred HHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCcc----HHHHhc
Confidence 9888877754 1 2233322 336788999999999999999999 999999
Q ss_pred CCCcCCCChh
Q 001865 955 HPFFKGVNWA 964 (1002)
Q Consensus 955 Hp~f~~~~~~ 964 (1002)
||||+.....
T Consensus 291 ~pffq~~~~~ 300 (538)
T KOG0661|consen 291 HPFFQVGRAS 300 (538)
T ss_pred Cccccccccc
Confidence 9999975433
No 18
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-45 Score=394.85 Aligned_cols=266 Identities=34% Similarity=0.563 Sum_probs=228.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC-----------hHHHHHHHHHHHHHHhCCCCCccee
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------RNKVHRACAEREILDMLDHPFVPAL 734 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~-----------~~~~~~~~~E~~il~~l~hpnIv~l 734 (1002)
...++|++.+.||+|.||.|-+|++..+++.||||++.+..... ....+.+.+||.||+++.|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34679999999999999999999999999999999998643211 1124678899999999999999999
Q ss_pred EEEEee--CCeEEEEEeccCCCchhHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEE
Q 001865 735 YASFQT--KTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 735 ~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~-l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
+++..+ .+.+|||+|||..|.+...-.. +. +++.+++.|+++++.||+|||.+|||||||||+|+|++++|++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 999975 5689999999988877654333 33 99999999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC----CCChhhHHHHHHH
Q 001865 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGIL 887 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~----~~~~sDIwSlGvi 887 (1002)
|+|||.+........ .+........+|||.|+|||.+.+.. .+.+.||||+||+
T Consensus 251 IsDFGVs~~~~~~~~----------------------~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT 308 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSD----------------------EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT 308 (576)
T ss_pred eeccceeeecccCCc----------------------cccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence 999999965532210 00001112368999999999987732 3458999999999
Q ss_pred HHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 888 LYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 888 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
||.|+.|+.||.+....+.+.+|....+.+|..+.+...+++||.+||++||++|++ +.+|..|||...
T Consensus 309 LYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~----l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 309 LYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRIT----LPDIKLHPWVTR 377 (576)
T ss_pred HHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheee----hhhheecceecc
Confidence 999999999999999999999999999999999888999999999999999999999 999999999886
No 19
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-45 Score=376.21 Aligned_cols=283 Identities=40% Similarity=0.731 Sum_probs=257.6
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+.+++|..++.||.|.||.|-+|+.+.+++.||+|++++..+..+..+..-..|-.+|+...||++..+...|+.++.+
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 45678999999999999999999999999999999999999888888888888999999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||..||.|+-.+.+. ..+++...+.+-..|+.||.|||+++||.||||.+|+|++.+|++||.|||+++..-.
T Consensus 244 CFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~- 320 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK- 320 (516)
T ss_pred EEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc-
Confidence 9999999999999999774 5699999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
......++||||.|+|||++....|+.++|.|.+||++|||++|++||...+..
T Consensus 321 --------------------------~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~ 374 (516)
T KOG0690|consen 321 --------------------------YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE 374 (516)
T ss_pred --------------------------ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence 112346799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
..+..|+-..+.+|.. ++++++.||..+|.+||.+|+..- +.|.+|.+|+||.+++|+..-.+..+....|.
T Consensus 375 kLFeLIl~ed~kFPr~--ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPq 447 (516)
T KOG0690|consen 375 KLFELILMEDLKFPRT--LSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQ 447 (516)
T ss_pred HHHHHHHhhhccCCcc--CCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCC
Confidence 9999999999999875 689999999999999999999863 56999999999999999998655544446665
No 20
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.7e-44 Score=364.45 Aligned_cols=261 Identities=26% Similarity=0.460 Sum_probs=225.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|..++.||+|.||+||+|++..+|+.||||.++.....+.- .....+|+++|+.++|+||+.++++|...+.+.+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi-~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI-NRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc-cHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 4799999999999999999999999999999999876433222 235678999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||| ..+|...++.. ...++..+++.++.++++||+|||++.|+||||||.|+|++++|.+||+|||+|+.+.....
T Consensus 81 Efm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-- 156 (318)
T KOG0659|consen 81 EFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-- 156 (318)
T ss_pred Eec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc--
Confidence 999 78999998765 46799999999999999999999999999999999999999999999999999987653322
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.....+-|..|+|||.++|. .|+..+|+||.|||+.||+-|.+.|+|.++.+.+
T Consensus 157 -------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL 211 (318)
T KOG0659|consen 157 -------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL 211 (318)
T ss_pred -------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence 22233789999999999886 5889999999999999999999999999999998
Q ss_pred HHHHhC--C---CCCCC---------------------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 908 ANILHK--D---LKFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 908 ~~i~~~--~---~~~~~---------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..|.+- . -.||. .+..+.++.+|+.+||.+||.+|++ +.|+|+|+||+..
T Consensus 212 ~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit----a~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 212 SKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT----ASQALKHPYFKSL 287 (318)
T ss_pred HHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc----HHHHhcchhhhcC
Confidence 888762 1 11221 1234667789999999999999999 9999999999974
Q ss_pred Ch
Q 001865 962 NW 963 (1002)
Q Consensus 962 ~~ 963 (1002)
..
T Consensus 288 P~ 289 (318)
T KOG0659|consen 288 PL 289 (318)
T ss_pred CC
Confidence 33
No 21
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-45 Score=365.76 Aligned_cols=260 Identities=35% Similarity=0.595 Sum_probs=242.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
...++|.+.+.||.|.||.||+|+.+.++..+|+|++.+..+......+++.+|++|...|+||||+++|++|.+...+|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 45679999999999999999999999999999999999887777777788999999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+++||..+|+|+..|..+....+++.....|+.|++.||.|+|.++||||||||+|+|++..|.+||+|||.+..
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~----- 173 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH----- 173 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee-----
Confidence 999999999999999977778899999999999999999999999999999999999999999999999999833
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.++....+.|||..|.+||...+..++..+|+|++|++.|+++.|.+||...+..+
T Consensus 174 ------------------------~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e 229 (281)
T KOG0580|consen 174 ------------------------APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE 229 (281)
T ss_pred ------------------------cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence 23445668899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.++.|.+..+.+| ..++..+.+||.+||.++|.+|.. ..|++.|||+..
T Consensus 230 tYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~----l~~v~~hpwI~a 278 (281)
T KOG0580|consen 230 TYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLA----LTEVMDHPWIVA 278 (281)
T ss_pred HHHHHHHccccCC--cccChhHHHHHHHHhccCcccccc----HHHHhhhHHHHh
Confidence 9999999888888 457899999999999999999999 999999999875
No 22
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.7e-44 Score=396.39 Aligned_cols=281 Identities=39% Similarity=0.693 Sum_probs=243.4
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 37999999999999999999999999999999997653333445567889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 208 (291)
T cd05612 154 -------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE 208 (291)
T ss_pred -------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 1123469999999999999889999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC-hhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCcc
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 983 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~ 983 (1002)
.+..+...++.. .+..+++||.+||+.||.+|++. ...++++++||||+.++|..+....-.....|.++.+.
T Consensus 209 ~i~~~~~~~~~~--~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 282 (291)
T cd05612 209 KILAGKLEFPRH--LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDG 282 (291)
T ss_pred HHHhCCcCCCcc--CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCcc
Confidence 888887766654 57889999999999999999953 23499999999999999998876554544566655444
No 23
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-44 Score=394.84 Aligned_cols=262 Identities=27% Similarity=0.416 Sum_probs=224.6
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--Ce
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--TH 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~ 743 (1002)
...+.|+.+.+||+|.||.||+|++..+|+.||+|.++.+.. +.....-..+||.||++|+||||++|.+..... +.
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 345789999999999999999999999999999999987632 344455667899999999999999999998765 78
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|||+||| .-+|.-++.. +...|++.+++.|++||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+.+..
T Consensus 193 iYlVFeYM-dhDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 193 IYLVFEYM-DHDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEEEecc-cchhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99999999 6788888764 345699999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
+... ..++.+-|++|+|||.|.|. .|+.++|+||.||||.||+.|++.|.|.+
T Consensus 271 ~~~~--------------------------~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t 324 (560)
T KOG0600|consen 271 SGSA--------------------------PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT 324 (560)
T ss_pred CCCc--------------------------ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc
Confidence 3321 23456889999999999885 68999999999999999999999999999
Q ss_pred hHHHHHHHHhC--CC--------CCCC-----------------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 903 RQKTFANILHK--DL--------KFPS-----------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 903 ~~~~~~~i~~~--~~--------~~~~-----------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
..+.+..|.+- .. .+|. ....+..+.+|+..||..||.+|.| |.++|+|
T Consensus 325 EveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t----A~~aL~s 400 (560)
T KOG0600|consen 325 EVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGT----ASSALQS 400 (560)
T ss_pred HHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccccc----HHHHhcC
Confidence 99999988752 10 1110 1124566789999999999999999 9999999
Q ss_pred CCcCC
Q 001865 956 PFFKG 960 (1002)
Q Consensus 956 p~f~~ 960 (1002)
+||+.
T Consensus 401 eyF~t 405 (560)
T KOG0600|consen 401 EYFTT 405 (560)
T ss_pred ccccc
Confidence 99964
No 24
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=9.1e-44 Score=403.75 Aligned_cols=285 Identities=35% Similarity=0.677 Sum_probs=244.6
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++.+.||+|+||.||+|.+..++ ..||+|++.+...........+.+|+.+++.++||||+++++++...+.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 356779999999999999999999976654 6899999976544444556678899999999999999999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+.+|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999764 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 233 (340)
T PTZ00426 184 ------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP 233 (340)
T ss_pred ------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH
Confidence 01235799999999999998899999999999999999999999999988
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC-hhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCc
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 982 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 982 (1002)
...+..+..+...+|.. .+..+.+||.+||+.||.+|++. .+.++++++||||++++|..+.....+....|.+...
T Consensus 234 ~~~~~~i~~~~~~~p~~--~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 311 (340)
T PTZ00426 234 LLIYQKILEGIIYFPKF--LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNV 311 (340)
T ss_pred HHHHHHHhcCCCCCCCC--CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCC
Confidence 88888888877666543 67889999999999999999732 2339999999999999999887555555566765444
Q ss_pred c
Q 001865 983 T 983 (1002)
Q Consensus 983 ~ 983 (1002)
.
T Consensus 312 ~ 312 (340)
T PTZ00426 312 F 312 (340)
T ss_pred c
Confidence 3
No 25
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-43 Score=400.60 Aligned_cols=268 Identities=40% Similarity=0.770 Sum_probs=237.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++..++.+|+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 45799999999999999999999999999999999986544444556678899999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 96 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~--- 170 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD--- 170 (329)
T ss_pred EEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC---
Confidence 99999999999999764 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 171 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 223 (329)
T PTZ00263 171 ---------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI 223 (329)
T ss_pred ---------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH
Confidence 11235799999999999999899999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC-hhcHHHHHcCCCcCCCChhhhhc
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
+..+..+...+|.. .+..+++||.+||+.||.+||+. .+.+++|++||||++.+|..+..
T Consensus 224 ~~~i~~~~~~~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~ 284 (329)
T PTZ00263 224 YEKILAGRLKFPNW--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYA 284 (329)
T ss_pred HHHHhcCCcCCCCC--CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHh
Confidence 88888877666543 67889999999999999999974 24589999999999999998754
No 26
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.7e-43 Score=399.07 Aligned_cols=265 Identities=42% Similarity=0.768 Sum_probs=230.3
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||+|.+..+|+.||+|++++...........+.+|+.+++.++||||+++++++..++.+|+||||+.++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998764444555667788999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001865 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----------
Confidence 999998764 45899999999999999999999999999999999999999999999999998532110
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001865 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05571 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211 (323)
T ss_pred -----------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC
Confidence 011234579999999999999999999999999999999999999999988888877777776
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccC
Q 001865 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
..++. ..+..+.+||.+||..||++||+... .+.+|++||||++++|..+....
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~ 266 (323)
T cd05571 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKK 266 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCC
Confidence 66654 46889999999999999999993211 29999999999999999996433
No 27
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-45 Score=427.99 Aligned_cols=287 Identities=38% Similarity=0.683 Sum_probs=256.9
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|.+++.||+|+||.|.+|+++.+++.||+|++.+-.+.......-|..|..||..-+++-|+.++..|+++.++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 35678999999999999999999999999999999999886555566667788899999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|..++.+.. .+++..+++|+..|+.||.-||+.|.|||||||+|||++.+|++||+|||.+-.+..+
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999998753 6999999999999999999999999999999999999999999999999988655422
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
....+..-+|||.|+|||+|.. +.|+..+|+||+||++|||++|..||+
T Consensus 229 --------------------------G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 229 --------------------------GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred --------------------------CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 2234556799999999999943 468889999999999999999999999
Q ss_pred CCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001865 900 GKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
..+..+.|-+|+.- .+.||....+|.++++||.++++ +|+.|++ ...++++..||||.+++|..++...|| .+|
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg-rngiedik~HpFF~g~~W~~iR~~~pP--~vP 358 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLG-RNGIEDIKNHPFFEGIDWDNIRESVPP--VVP 358 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc-cccHHHHHhCccccCCChhhhhhcCCC--CCC
Confidence 99999999999864 78888777799999999999996 8899987 556999999999999999999999999 557
Q ss_pred CCCCcc
Q 001865 978 LFATDT 983 (1002)
Q Consensus 978 ~~~~~~ 983 (1002)
.++-|.
T Consensus 359 evssd~ 364 (1317)
T KOG0612|consen 359 EVSSDD 364 (1317)
T ss_pred cCCCCC
Confidence 765444
No 28
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=381.58 Aligned_cols=273 Identities=26% Similarity=0.401 Sum_probs=237.8
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.++.++.+.|++...||.|..++||+|+...++.+||||++..+.. ......+.+|+..|+.++||||+.++..|..+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc--~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC--NNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh--hhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 3456778999999999999999999999999999999999986543 33478899999999999999999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||.||.+|++.+++...-...+++..+..|++++++||.|||++|.||||||+.||||+.+|.|||+|||.+..+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999998754455999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccc-cccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS-NSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gt~~Y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.... ...... .+++||+.|||||++.. ..|+.|+||||||++..||.+|..||
T Consensus 177 ~~~G------------------------~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf 232 (516)
T KOG0582|consen 177 FDSG------------------------DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPF 232 (516)
T ss_pred cccC------------------------ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCc
Confidence 4321 011112 67899999999999754 46888999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCC--------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001865 899 RGKTRQKTFANILHKDLKFPSS--------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~--------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
....+.+++..-+++.++.+.. ...+..+..++..||++||.+||| |.++|+|+||+...-.
T Consensus 233 ~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRpt----AskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 233 SKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPT----ASKLLKHAFFKKAKSK 302 (516)
T ss_pred ccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCC----HHHHhccHHHhhccch
Confidence 9999999888888877654432 224567889999999999999999 9999999999986543
No 29
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-44 Score=399.21 Aligned_cols=266 Identities=27% Similarity=0.462 Sum_probs=235.1
Q ss_pred HHhhcccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeE
Q 001865 656 IQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALY 735 (1002)
Q Consensus 656 ~~~~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~ 735 (1002)
++.+...+... ..|.....||+|+.|.||.|....+++.||+|.+.... .....-+.+|+.+|+..+|+|||.++
T Consensus 262 l~~v~~~~dP~--~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---Q~~keLilnEi~Vm~~~~H~NiVnfl 336 (550)
T KOG0578|consen 262 LKRVVSQGDPR--SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK---QPKKELLLNEILVMRDLHHPNIVNFL 336 (550)
T ss_pred hheeccCCChh--hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc---CCchhhhHHHHHHHHhccchHHHHHH
Confidence 34444555543 48999999999999999999999999999999997653 33446688999999999999999999
Q ss_pred EEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEec
Q 001865 736 ASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
+.|...+.+|+|||||+||+|.+.+.. ..+++.++..|++.++.||+|||.+||||||||.+|||++.+|.+||+||
T Consensus 337 ~Sylv~deLWVVMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 337 DSYLVGDELWVVMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred HHhcccceeEEEEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeee
Confidence 999999999999999999999999976 34999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001865 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
|++..+.... ....+.+|||+|||||++....|++++||||||+++.||+-|+
T Consensus 414 GFcaqi~~~~---------------------------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGE 466 (550)
T KOG0578|consen 414 GFCAQISEEQ---------------------------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGE 466 (550)
T ss_pred eeeecccccc---------------------------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCC
Confidence 9996654221 1345779999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 896 TPFRGKTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+||...+....+..|.. +...+.....+|+.+++||.+||+.|+.+|++ |.+||+||||+-
T Consensus 467 PPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ras----A~eLL~HpFl~~ 528 (550)
T KOG0578|consen 467 PPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRAS----AKELLEHPFLKM 528 (550)
T ss_pred CCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCC----HHHHhcChhhhh
Confidence 99998888777777764 55666777779999999999999999999999 999999999964
No 30
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.4e-43 Score=388.57 Aligned_cols=280 Identities=33% Similarity=0.551 Sum_probs=231.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++++..++..|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 47889999999999999999999999999999876544333444567789999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
||++|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 999999998886544456899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05631 156 -----------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE 212 (285)
T ss_pred -----------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence 011234689999999999999999999999999999999999999987654322222
Q ss_pred HHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001865 910 ILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 910 i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+... ..........+..+.+||.+||+.||.+||+..+ .++++++||||.+++|..+.....+....|
T Consensus 213 ~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05631 213 VDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP 283 (285)
T ss_pred HHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCC
Confidence 2111 1112222346889999999999999999997542 389999999999999999987755544545
No 31
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=9.3e-43 Score=399.64 Aligned_cols=295 Identities=36% Similarity=0.636 Sum_probs=235.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||+||+|.+..+++.||+|++++...........+.+|+.++..++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 37999999999999999999999999999999998754444455567888999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999764 459999999999999999999999999999999999999999999999999986543211100
Q ss_pred CCcchh-h--hhcccCCC-----CCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 829 LPTTNE-K--KRRHKGQQ-----NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 829 ~~~~~~-~--~~~~~~~~-----~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
...... . ........ ...............+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 000000 0 00000000 000000001112356899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCC---CCChhcHHHHHcCCCcCCCChhhhhccC
Q 001865 901 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSR---LGSHEGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 901 ~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~R---pt~~~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
.+..+.+..+... ...+|.....+..+++||.+|+. +|.+| |+ +++|++||||++++|..+....
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~----~~ei~~hp~f~~~~~~~~~~~~ 308 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG----VEEIKTNPFFEGVDWEHIRERP 308 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC----HHHHhCCCCCCCCCHHHHHhCC
Confidence 8888888888763 45566656688999999999775 55555 66 9999999999999999996644
No 32
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-44 Score=365.07 Aligned_cols=270 Identities=31% Similarity=0.532 Sum_probs=235.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC-----hHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeC
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (1002)
...|.-.+.||.|..++|-+|.++.+|..+|+|++....... ....+.-.+|+.||+++ +||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 457888899999999999999999999999999986432211 12234456799999998 899999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+++|+|.|+.|.|++++... ..+++...+.|++||+.|++|||.++||||||||+|||++++.++||+|||+|+.+
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999999999874 56999999999999999999999999999999999999999999999999999775
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC------CCCCChhhHHHHHHHHHHHHcCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~------~~~~~~sDIwSlGvil~elltG~ 895 (1002)
.... .-...||||+|+|||.+.. ..|+..+|+|++|+|+|.|+.|+
T Consensus 174 ~~Ge----------------------------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 174 EPGE----------------------------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred CCch----------------------------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 4221 1235799999999999854 46788999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCC--CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCC
Q 001865 896 TPFRGKTRQKTFANILHKDLKF--PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNP 971 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~ 971 (1002)
+||......-+++.|+.+...+ |.+..++...++||.+||+.||.+|+| ++|+|.||||..+.....+.+.|
T Consensus 226 pPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rit----ake~LaHpff~q~~~~~~r~msP 299 (411)
T KOG0599|consen 226 PPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRIT----AKEALAHPFFIQIAQQQARQMSP 299 (411)
T ss_pred CchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhccc----HHHHhcChHHHHHHHhcccccCC
Confidence 9999998889999999987765 456678889999999999999999999 99999999998876666665554
No 33
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.9e-43 Score=403.42 Aligned_cols=303 Identities=36% Similarity=0.683 Sum_probs=239.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+++++.++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 37999999999999999999999999999999997654434455667888999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..+.......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999996432111000
Q ss_pred C-----Ccchhhhh---cccCCCCC------------cccccccccccccccCCcccccccccCCCCCChhhHHHHHHHH
Q 001865 829 L-----PTTNEKKR---RHKGQQNP------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 829 ~-----~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
. ........ ........ .+...........+||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0 00000000 00000000 0000000011246799999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CChhcHHHHHcCCCcCCCCh
Q 001865 889 YEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL---GSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 889 ~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rp---t~~~~a~elL~Hp~f~~~~~ 963 (1002)
|+|++|..||.+.+..+.+..+.. ..+.++.....+..+.+||.+||. +|.+|+ + +.++++||||++++|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~----~~~~l~hp~~~~~~~ 313 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG----AHEIKSHPFFRGVDW 313 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC----HHHHhcCCCcCCCCH
Confidence 999999999998888777777765 344556555678899999999997 788765 6 999999999999999
Q ss_pred hhhhccCCCCCCCCCCC
Q 001865 964 ALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 964 ~~~~~~~~~~~~~p~~~ 980 (1002)
+.++...+|-+ |.+.
T Consensus 314 ~~~~~~~~~~~--~~~~ 328 (377)
T cd05629 314 DTIRQIRAPFI--PQLK 328 (377)
T ss_pred HHHccCCCCcc--cCCC
Confidence 99987766644 5443
No 34
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=9.3e-43 Score=394.91 Aligned_cols=277 Identities=37% Similarity=0.643 Sum_probs=238.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++++...........+.+|+.++..++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998764444455667889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~ 208 (333)
T cd05600 154 -------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE 208 (333)
T ss_pred -------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH
Confidence 1234579999999999999999999999999999999999999999988877777
Q ss_pred HHHhCC--CCCCCCC----CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCc
Q 001865 909 NILHKD--LKFPSST----PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 982 (1002)
Q Consensus 909 ~i~~~~--~~~~~~~----~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 982 (1002)
.+.... ...+... ..+.++.+||.+||..+|.+||+ +.++++||||+.++|+.+....+| .+|.+..+
T Consensus 209 ~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s----~~~ll~h~~~~~~~~~~~~~~~~~--~~~~~~~~ 282 (333)
T cd05600 209 NLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS----LEDIKNHPFFKEVDWNELRELKPP--FVPELESE 282 (333)
T ss_pred HHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC----HHHHHhCcccCCCCHHHHhhCCCC--CCCCCCCc
Confidence 665432 2222221 45889999999999999999999 999999999999999998866665 34654443
Q ss_pred c
Q 001865 983 T 983 (1002)
Q Consensus 983 ~ 983 (1002)
.
T Consensus 283 ~ 283 (333)
T cd05600 283 I 283 (333)
T ss_pred c
Confidence 3
No 35
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-43 Score=368.21 Aligned_cols=264 Identities=23% Similarity=0.354 Sum_probs=224.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--CCeE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~ 744 (1002)
..+.|+.+..|++|+||.||+|+++.|++.||+|.++-..- .....-.-.+||.+|.+.+|||||.+-++... -+.+
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke-k~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE-KEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccc-cCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 45689999999999999999999999999999999986532 11222345789999999999999999998763 4679
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||||| .-+|..++...+ ..+...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.++..
T Consensus 153 y~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 153 YIVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eeeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999999 779999998764 56999999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
....+..+-|.+|+|||.+.+. .|+.+.|+||+|||+.||+++++.|+|.+.
T Consensus 231 ---------------------------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE 283 (419)
T KOG0663|consen 231 ---------------------------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE 283 (419)
T ss_pred ---------------------------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch
Confidence 1233456889999999999886 589999999999999999999999999999
Q ss_pred HHHHHHHHhC-----C--------------CCCCCC-----------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 904 QKTFANILHK-----D--------------LKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~~-----~--------------~~~~~~-----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+.+|.+- . +.++.. ...+....+|+..+|.+||.+|+| |.+.|
T Consensus 284 ~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t----A~~~L 359 (419)
T KOG0663|consen 284 IDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT----AEDGL 359 (419)
T ss_pred HHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc----HHHhh
Confidence 9888888651 0 111111 114567889999999999999999 99999
Q ss_pred cCCCcCCCChh
Q 001865 954 KHPFFKGVNWA 964 (1002)
Q Consensus 954 ~Hp~f~~~~~~ 964 (1002)
+|+||.....+
T Consensus 360 ~h~~F~e~P~p 370 (419)
T KOG0663|consen 360 KHEYFRETPLP 370 (419)
T ss_pred cccccccCCCC
Confidence 99999985444
No 36
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-43 Score=383.66 Aligned_cols=261 Identities=32% Similarity=0.479 Sum_probs=218.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC--eEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCL 746 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 746 (1002)
..|...+.||+|+||+||++.+..+|..+|+|.+... .....+.+.+|+.+|.+++|||||++++...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~---~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE---DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecc---cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 4688899999999999999999999999999998754 2222677899999999999999999999755444 6899
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|||+++|+|.+++....+ .+++..++.+.+||++||+|||++|||||||||+|||++. +|.+||+|||++......
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~- 171 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK- 171 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc-
Confidence 9999999999999998765 7999999999999999999999999999999999999999 799999999998654320
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCC-CCh
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG-KTR 903 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~-~~~ 903 (1002)
...........||+.|||||++... ...+++|||||||++.||+||+.||.. ...
T Consensus 172 -----------------------~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~ 228 (313)
T KOG0198|consen 172 -----------------------GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE 228 (313)
T ss_pred -----------------------cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch
Confidence 0011223457899999999999853 334599999999999999999999987 344
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
...+-.+........-+..++.++++||.+||.+||++||| |.++|+|||.+..
T Consensus 229 ~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpt----a~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 229 AEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPT----AEELLEHPFLKQN 282 (313)
T ss_pred HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcC----HHHHhhChhhhcc
Confidence 44444454444222334458899999999999999999999 9999999999874
No 37
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.2e-42 Score=399.06 Aligned_cols=301 Identities=38% Similarity=0.696 Sum_probs=240.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||.|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++||||++++++|..++++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998654444455667788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.+|+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++..+.......
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999999764 459999999999999999999999999999999999999999999999999986543211100
Q ss_pred C-Ccchhhhhc----------ccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001865 829 L-PTTNEKKRR----------HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 829 ~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
. ......... ........+...........+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 0 000000000 00000000000000112245799999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCC
Q 001865 898 FRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 973 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~ 973 (1002)
|.+.+....+..+.... ..++.....+..+.+||.+||. +|.+|++. ..+.++|+||||++++|..+....+|.
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~~ 314 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN-NGVNEIKSHPFFKGVDWEHIRERPAPI 314 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCCC
Confidence 99988888877776543 4455555678999999999997 99999974 359999999999999999887766553
No 38
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.8e-42 Score=391.50 Aligned_cols=264 Identities=44% Similarity=0.793 Sum_probs=228.9
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765444556677889999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001865 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------
Confidence 999988764 45899999999999999999999999999999999999999999999999998542110
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001865 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~ 211 (328)
T cd05593 149 -----------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211 (328)
T ss_pred -----------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC
Confidence 011224579999999999998889999999999999999999999999888877777777666
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhcc
Q 001865 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
..+|. ..+..+.+||.+||..||.+|++.. +.+.++++||||.+++|..+...
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~ 265 (328)
T cd05593 212 IKFPR--TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDK 265 (328)
T ss_pred ccCCC--CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 66554 4688999999999999999998321 12999999999999999987544
No 39
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.5e-42 Score=387.73 Aligned_cols=262 Identities=42% Similarity=0.743 Sum_probs=228.7
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCch
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|+||.||+|.+..+++.||+|++++...........+.+|+.+++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999999999999999865444455567788899999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001865 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------------ 146 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------------ 146 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC------------
Confidence 9999764 45899999999999999999999999999999999999999999999999998542110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001865 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 147 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 211 (312)
T cd05585 147 ---------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR 211 (312)
T ss_pred ---------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC
Confidence 01123457999999999999999999999999999999999999999998888888888877666
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccC
Q 001865 917 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 917 ~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
++. ..+..+.+||.+||..||.+||++. .+.++|+||||+..+|..+....
T Consensus 212 ~~~--~~~~~~~~li~~~L~~dp~~R~~~~-~~~e~l~hp~~~~~~~~~~~~~~ 262 (312)
T cd05585 212 FPD--GFDRDAKDLLIGLLSRDPTRRLGYN-GAQEIKNHPFFSQLSWKKLLMKG 262 (312)
T ss_pred CCC--cCCHHHHHHHHHHcCCCHHHcCCCC-CHHHHHcCCCcCCCCHHHHHhCC
Confidence 654 4678999999999999999998642 28999999999999998775433
No 40
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.9e-42 Score=397.75 Aligned_cols=285 Identities=34% Similarity=0.603 Sum_probs=238.8
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++..++.+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 34567999999999999999999999999999999999765433444455677899999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999998653 4889999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC----CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~----~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred C--------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence 0 0112345799999999998654 377899999999999999999999999
Q ss_pred CChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCC
Q 001865 901 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDA 976 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~ 976 (1002)
.+....+..+.... +.++.....+..+.+||.+||+.+|.+ |++ ++++++||||+..+|............+
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s----~~ell~h~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T cd05596 250 DSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNG----VDEIKSHPFFKNDQWTFDNIRETVAPVV 325 (370)
T ss_pred CCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCC----HHHHhcCcccCCCChhhHHhcCCCcCcc
Confidence 88888888887643 456666668999999999999999987 999 9999999999998887553333333345
Q ss_pred CCCCCc
Q 001865 977 PLFATD 982 (1002)
Q Consensus 977 p~~~~~ 982 (1002)
|.++.+
T Consensus 326 p~~~~~ 331 (370)
T cd05596 326 PELSSD 331 (370)
T ss_pred CcCCCc
Confidence 554443
No 41
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.5e-42 Score=388.43 Aligned_cols=263 Identities=41% Similarity=0.777 Sum_probs=228.4
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||++.+..+|+.||+|++++...........+.+|+.+++.++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998764444555667788999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001865 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---------- 148 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----------
Confidence 999988764 45899999999999999999999999999999999999999999999999988532110
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001865 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05595 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211 (323)
T ss_pred -----------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 011123579999999999999899999999999999999999999999888888888877776
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhc
Q 001865 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
..++. ..+..+.+||.+||..||.+|++.. ..+.++++||||.+++|..+..
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 264 (323)
T cd05595 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ 264 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 66654 4688999999999999999998321 1399999999999999998754
No 42
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.4e-42 Score=395.87 Aligned_cols=296 Identities=36% Similarity=0.581 Sum_probs=233.4
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++++.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999999999999999999987654455566778899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99999999999764 4589999999999999999999999999999999999999999999999999854321110000
Q ss_pred CcchhhhhcccCC--------------------CCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001865 830 PTTNEKKRRHKGQ--------------------QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 830 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
............. ................+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 0000000000000 00000000111223568999999999999988999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHccc--cCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001865 890 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLH--RDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 890 elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~~~~Ll~~~L~--~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
+|++|..||...+.......+.. .....+....++.++.+||.+||. .+|..|++ +.++++||||+.++|..
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~----~~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNG----ADDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCcccCCCChhH
Confidence 99999999998887776666654 334555555688999999999654 45556999 99999999999999987
Q ss_pred hhccCC
Q 001865 966 VRCMNP 971 (1002)
Q Consensus 966 ~~~~~~ 971 (1002)
.....+
T Consensus 316 ~~~~~~ 321 (381)
T cd05626 316 DIRTQP 321 (381)
T ss_pred HhhcCC
Confidence 644433
No 43
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-43 Score=372.91 Aligned_cols=255 Identities=30% Similarity=0.555 Sum_probs=234.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..+|++.+.||.|.||.|-+|++...|+.||||.++++.+.+..+.-.+.+||+||..|+||||+++|++|++.+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||..+|.|++|+... +.|++..++.+++||+.|+.|+|+++++|||||.+|||++.|+++||.|||++..+..+
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--- 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--- 206 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc---
Confidence 9999999999999875 56999999999999999999999999999999999999999999999999999665422
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
..-.++||+|.|.+||.+.+.+| ++.+|.||||++||.|+.|..||.|.+....
T Consensus 207 -------------------------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l 261 (668)
T KOG0611|consen 207 -------------------------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL 261 (668)
T ss_pred -------------------------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH
Confidence 12357899999999999999887 5689999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+++|..+...-|.. +..+..||+.||..||+.|.| +++|-.|=|+.
T Consensus 262 vrQIs~GaYrEP~~---PSdA~gLIRwmLmVNP~RRAT----ieDiAsHWWvN 307 (668)
T KOG0611|consen 262 VRQISRGAYREPET---PSDASGLIRWMLMVNPERRAT----IEDIASHWWVN 307 (668)
T ss_pred HHHhhcccccCCCC---CchHHHHHHHHHhcCcccchh----HHHHhhhheee
Confidence 99999887655543 345778999999999999999 99999998864
No 44
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.4e-42 Score=394.64 Aligned_cols=299 Identities=37% Similarity=0.683 Sum_probs=238.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++++...........+.+|+.++..++||||+++++++...+.+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998654444555677888999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||+|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999986543211000
Q ss_pred C------CcchhhhhcccCC--CCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 829 L------PTTNEKKRRHKGQ--QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 829 ~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
. ............. ....+...........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 0 0000000000000 0000000011122356899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCC
Q 001865 901 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNP 971 (1002)
Q Consensus 901 ~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~ 971 (1002)
.+....+..+... ...+|.....+..+++||.+|+. ||.+|++.. .++++++||||++++|..+.....
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~-~~~ei~~hp~f~~~~~~~~~~~~~ 309 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSN-GVEEIKSHPFFEGVDWGHIRERPA 309 (360)
T ss_pred CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCC-CHHHHhcCCCCCCCCHHHHhcCCC
Confidence 8888888777753 34555555678999999999874 999999632 389999999999999999976543
No 45
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.2e-42 Score=387.25 Aligned_cols=273 Identities=37% Similarity=0.704 Sum_probs=231.5
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|+++.+++.||+|++++...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999865443444556777888888876 799999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--------- 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--------- 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 211 (320)
T cd05590 150 ------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211 (320)
T ss_pred ------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999988999999999999999999999999999888888888877
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh--cHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~--~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. ..+..+.+||.+||+.||.+||++.+ ..+++++||||+.++|..+.....+....|.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 276 (320)
T cd05590 212 EVVYPT--WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPR 276 (320)
T ss_pred CCCCCC--CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 666554 36889999999999999999999432 2389999999999999988654433333343
No 46
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.1e-42 Score=386.67 Aligned_cols=278 Identities=35% Similarity=0.666 Sum_probs=236.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC-CCcceeEEEEeeCCeEEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~lV~ 748 (1002)
+|++++.||+|+||.||+|.+..+++.||||++++...........+..|+.++..+.| ++|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 58999999999999999999999999999999987644444556677889999999976 46889999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~---- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG---- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC----
Confidence 999999999998764 45899999999999999999999999999999999999999999999999988432100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (324)
T cd05587 155 -----------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ 211 (324)
T ss_pred -----------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011224579999999999999999999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.+......++. ..+..+.+|+.+||..||.+|++.. ...+++++||||+.++|..+.....+....|.
T Consensus 212 ~i~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd05587 212 SIMEHNVSYPK--SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPK 280 (324)
T ss_pred HHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCc
Confidence 88877666554 4688899999999999999999853 34589999999999999988655443333443
No 47
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2e-42 Score=391.71 Aligned_cols=273 Identities=38% Similarity=0.673 Sum_probs=236.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|.+.+.||+|+||.||+|.+..+++.||+|++++...........+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998764444455667888999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-- 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-- 157 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--
Confidence 9999999999997652 4599999999999999999999999999999999999999999999999999865431110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCccccccccc------CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~------~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.......||+.|+|||++. ...++.++|||||||++|+|++|+.||...+
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 158 ------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 0112346899999999986 4567789999999999999999999999888
Q ss_pred hHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCC
Q 001865 903 RQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 973 (1002)
Q Consensus 903 ~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~ 973 (1002)
....+..+... ...++.....+..+.+||.+||+ +|.+||+ ++++++||||+.++|..+....+|.
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t----~~~l~~h~~~~~~~~~~~~~~~~~~ 281 (330)
T cd05601 214 SAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLG----YEGLCCHPFFSKIDWNNIRNSLPPF 281 (330)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCC----HHHHhCCCCcCCCCHHHHhhCCCCc
Confidence 88887777654 24456656678999999999998 9999999 9999999999999999998766653
No 48
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.3e-42 Score=395.59 Aligned_cols=294 Identities=38% Similarity=0.633 Sum_probs=233.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||++++++|..++.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 68999999999999999999999999999999986544445556778899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
||++|+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..+........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999999764 4589999999999999999999999999999999999999999999999999854321111000
Q ss_pred Ccchhhhhc-------ccCCC-------------CCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001865 830 PTTNEKKRR-------HKGQQ-------------NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 830 ~~~~~~~~~-------~~~~~-------------~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
.......+. ..+.. ...............+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 000000000 00000 0000000111223568999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhh
Q 001865 890 EMLYGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 890 elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
+|++|+.||.+.+..+....+... ....|.....++++.+||.+|+ .+|.+|++ ...+.++++||||+.++|....
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~-~~~~~ei~~hp~f~~~~~~~~~ 317 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG-KNGADEIKAHPFFKTIDFSSDL 317 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC-CCCHHHHhcCCCcCCcChHHHH
Confidence 999999999998887777777653 3445555567899999999987 59999997 3348999999999999998643
No 49
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=368.64 Aligned_cols=261 Identities=27% Similarity=0.414 Sum_probs=222.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee-----CC
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KT 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~ 742 (1002)
...|..++.||.|+||.|+.|.++.+|+.||||.+... +......++..+|+.+|+.++|+||+.+++++.. -+
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 35677789999999999999999999999999998754 4566778889999999999999999999999865 45
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+|+|+| +.+|...++.+ ..+++.++..++.||+.||+|+|+.||+||||||+|+|++.+..+||+|||+|+...
T Consensus 100 DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecc
Confidence 799999999 99999999875 449999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
..+ .....+..+.|..|+|||.+. ...|+...||||+|||+.||++|++.|+|.
T Consensus 177 ~~~-------------------------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~ 231 (359)
T KOG0660|consen 177 KFF-------------------------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK 231 (359)
T ss_pred ccC-------------------------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC
Confidence 220 011224568899999999974 467899999999999999999999999998
Q ss_pred ChHHHHHHHHhC-----------------------CCCCC------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 902 TRQKTFANILHK-----------------------DLKFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~~~~~~~~i~~~-----------------------~~~~~------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+....+..|+.- ....| ..+..++.+.+||.+||..||.+|+| ++|+
T Consensus 232 d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit----a~eA 307 (359)
T KOG0660|consen 232 DYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT----AEEA 307 (359)
T ss_pred chHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC----HHHH
Confidence 777766665431 11111 12446788999999999999999999 9999
Q ss_pred HcCCCcCCC
Q 001865 953 KKHPFFKGV 961 (1002)
Q Consensus 953 L~Hp~f~~~ 961 (1002)
|+||||...
T Consensus 308 L~hPYl~~~ 316 (359)
T KOG0660|consen 308 LAHPYLAPY 316 (359)
T ss_pred hcChhhhhh
Confidence 999999984
No 50
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.5e-42 Score=395.96 Aligned_cols=292 Identities=38% Similarity=0.639 Sum_probs=231.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+.++||||+++++.|..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 37999999999999999999999999999999997654333445567788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||++|+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..+.......
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999985432111000
Q ss_pred CCcchhhhhccc--------CCC----CC----cccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH
Q 001865 829 LPTTNEKKRRHK--------GQQ----NP----VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 829 ~~~~~~~~~~~~--------~~~----~~----~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ell 892 (1002)
........+... ... .+ .............+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 000000000000 000 00 00000111223568999999999999999999999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCC---CChhcHHHHHcCCCcCCCChhhhh
Q 001865 893 YGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRL---GSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 893 tG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rp---t~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
+|+.||.+.+..+....+... ....+....++..+.+||.+|+ .+|.+|+ + +.++++||||+.++|..+.
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t----~~ell~h~~~~~~~~~~~~ 313 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNG----ADEIKAHPFFKGIDFASLI 313 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCC----HHHHhCCCCcCCCCHHHHh
Confidence 999999998877766666543 2334444567889999999987 5999999 6 9999999999999999984
No 51
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.2e-42 Score=394.57 Aligned_cols=285 Identities=34% Similarity=0.629 Sum_probs=234.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++..++.+|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999999999999999997654434444556788999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|||||++|+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999999653 48999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~----~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.......+||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.
T Consensus 197 --------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred --------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 01123457999999999997643 678999999999999999999999998
Q ss_pred ChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001865 902 TRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 902 ~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+....+..+.... +.++.....+..+++|+.+||..++.. |++ +.++++||||+...|........+....|
T Consensus 251 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~----~~e~l~hp~~~~~~~~~~~~~~~~~~~~p 326 (370)
T cd05621 251 SLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNG----VEEIKQHPFFKNDQWNWDNIRETAAPVVP 326 (370)
T ss_pred CHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCC----HHHHhcCcccCCCCcChHhcCCCCCCcCC
Confidence 8888888887643 455665567899999999999855543 778 99999999999866654332222223445
Q ss_pred CCCCcc
Q 001865 978 LFATDT 983 (1002)
Q Consensus 978 ~~~~~~ 983 (1002)
.++.+.
T Consensus 327 ~~~~~~ 332 (370)
T cd05621 327 ELSSDI 332 (370)
T ss_pred CCCCcc
Confidence 544443
No 52
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=387.55 Aligned_cols=259 Identities=33% Similarity=0.559 Sum_probs=236.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCeEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~l 746 (1002)
...|.+.+.||.|.||.||+|.++.+|+.||+|++.+...........+.+|+.||+++. |||||.++++|++...+|+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 568999999999999999999999999999999999887666666788999999999998 9999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC----CcEEEEeccCCcccC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~----g~vkL~DFG~a~~~~ 822 (1002)
|||+|.||.|++.+... .+++..+..++.||+.+++|||+.||+||||||+|+|+... +.+|++|||+|....
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 99999999999999876 39999999999999999999999999999999999999743 579999999996643
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. .......+||+.|+|||++....|+..+||||+|+++|.|++|.+||.+.+
T Consensus 191 ~----------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 191 P----------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred C----------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence 2 123346799999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 903 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.......+..+.+.++ .+..++..+++||.+||..||.+|++ +.++|+|||+++.
T Consensus 243 ~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t----a~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 243 EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT----AAQALQHPWIKSI 299 (382)
T ss_pred hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC----HHHHhcCccccCC
Confidence 9999999999877655 45667999999999999999999999 9999999999874
No 53
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=7.3e-42 Score=385.54 Aligned_cols=273 Identities=39% Similarity=0.724 Sum_probs=233.3
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999876444445556677888998866 899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--------- 149 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--------- 149 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 211 (321)
T cd05591 150 ------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211 (321)
T ss_pred ------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999989999999999999999999999999999988888888887
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh---cHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~---~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...+|. ..+.++.+||.+||..||++||+..+ .++++++||||..++|..+..........|.
T Consensus 212 ~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T cd05591 212 DVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPK 277 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCC
Confidence 666554 36889999999999999999994433 3999999999999999998665544444443
No 54
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-43 Score=377.98 Aligned_cols=296 Identities=34% Similarity=0.564 Sum_probs=250.9
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.++..+.|+.-++||.||||.||-|.-..||+.||+|.+.+..+..+.......+|..||.++++++||.+-..|+..+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 34667889999999999999999999999999999999987666555666677899999999999999999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||..|.||+|.-.+-......+++..+++|+.+|+.||++||+.+||.|||||+|||+|+.|+|+|+|+|+|..+..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999999888776666799999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.. .....+||.+|||||++.+..|+...|.|||||+||+|+.|+.||.....
T Consensus 340 g~----------------------------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 340 GK----------------------------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred CC----------------------------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 21 12234899999999999999999999999999999999999999975432
Q ss_pred ----HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 904 ----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 904 ----~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.++-+.++.....++ ...|+++++|...+|++||.+|+..+ +.++++.+||||+.+||..++.-.-+...+|.
T Consensus 392 Kvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPd 469 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPD 469 (591)
T ss_pred hhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCC
Confidence 344445555555665 45799999999999999999999998 78999999999999999999543333335665
Q ss_pred CCCcccccccc
Q 001865 979 FATDTEKEYKV 989 (1002)
Q Consensus 979 ~~~~~~~~~~~ 989 (1002)
-.+-.++|..+
T Consensus 470 p~aVyakDv~D 480 (591)
T KOG0986|consen 470 PGAVYAKDVLD 480 (591)
T ss_pred ccccchhhhhh
Confidence 44433444333
No 55
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.2e-42 Score=393.16 Aligned_cols=305 Identities=41% Similarity=0.716 Sum_probs=245.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|.+++.||+|+||.||+|.+..+++.||+|++++...........+..|+.++..++||||+++++++.+++++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998764444455667888999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999875 569999999999999999999999999999999999999999999999999987654322100
Q ss_pred CCcchhhhhcc--cCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 829 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........... ....................||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 00000000000 0000000000011123356799999999999999999999999999999999999999999888888
Q ss_pred HHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCC
Q 001865 907 FANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 981 (1002)
Q Consensus 907 ~~~i~~--~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 981 (1002)
+..+.. ....++....++..+.+||.+||. ||.+|++. +.++++||||++++|.......+|. .|.++.
T Consensus 239 ~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s---~~~ll~hp~~~~~~~~~~~~~~~~~--~~~~~~ 309 (350)
T cd05573 239 YNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGS---FEEIKSHPFFKGIDWENLRETKPPF--VPELSS 309 (350)
T ss_pred HHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCC---HHHHhcCCCcCCCCHHHHhhCCCCc--CCCCCC
Confidence 888876 555666665678999999999997 99999984 7899999999999999888555553 354443
No 56
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=9.2e-42 Score=385.22 Aligned_cols=267 Identities=40% Similarity=0.768 Sum_probs=229.6
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHH---HhCCCCCcceeEEEEeeCCeEEEE
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL---DMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il---~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
|++++.||+|+||.||+|.+..+++.||||++++...........+.+|+.++ +.++||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78899999999999999999999999999999865433344455666776665 456899999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.+++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--- 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC---
Confidence 999999999988754 35999999999999999999999999999999999999999999999999987432100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+
T Consensus 155 ------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~ 210 (324)
T cd05589 155 ------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210 (324)
T ss_pred ------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 01123467999999999999998999999999999999999999999999888888
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhcc
Q 001865 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
..+......++. .++..+.+||.+||+.||.+||+..+ .+.++++||||+.++|......
T Consensus 211 ~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~ 271 (324)
T cd05589 211 DSIVNDEVRYPR--FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLAR 271 (324)
T ss_pred HHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhC
Confidence 888877666554 36888999999999999999996543 4999999999999999987543
No 57
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-41 Score=384.45 Aligned_cols=278 Identities=35% Similarity=0.665 Sum_probs=238.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+|.+++.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+ .|++|+.+++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 588999999999999999999999999999999876443444455667788888877 5899999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC----
Confidence 999999999998764 45899999999999999999999999999999999999999999999999998532110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~ 211 (323)
T cd05616 155 -----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 211 (323)
T ss_pred -----------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.+......+|. ..+.++.+|+.+||+.||.+|++.. +...++++||||+.++|..+.....+....|.
T Consensus 212 ~i~~~~~~~p~--~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05616 212 SIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPK 280 (323)
T ss_pred HHHhCCCCCCC--cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCc
Confidence 88887766654 4688999999999999999999853 34689999999999999999765544444444
No 58
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.5e-42 Score=384.94 Aligned_cols=264 Identities=41% Similarity=0.744 Sum_probs=227.2
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||+||+|.+..+|+.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654433344455556655 46788999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--------- 149 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 211 (323)
T cd05575 150 ------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK 211 (323)
T ss_pred ------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhcc
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
....+. ..+..+.+||.+||+.||.+||+..+.+.++++||||..++|..+...
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~ 265 (323)
T cd05575 212 PLRLKP--NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNK 265 (323)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhc
Confidence 655443 468899999999999999999998777899999999999999988543
No 59
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3e-41 Score=379.50 Aligned_cols=311 Identities=59% Similarity=1.016 Sum_probs=256.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+..|+++++.++||||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 37999999999999999999999999999999998765444456677889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++.......+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999987656679999999999999999999999999999999999999999999999999986543221111
Q ss_pred CCcchhhhhcc--cCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 829 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........... ....................|+..|+|||++.+..++.++||||||+++|+|++|..||.+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 00000000000 0000000011111223456799999999999998899999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCC
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 979 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 979 (1002)
+..+......++.....+..+.+||.+||..||++||+....++++|+||||++++|..++-..+|.++.|..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (316)
T cd05574 241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRPDD 313 (316)
T ss_pred HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCccc
Confidence 8888777777766655788999999999999999999999999999999999999999999988888866544
No 60
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.9e-42 Score=386.42 Aligned_cols=264 Identities=42% Similarity=0.780 Sum_probs=227.7
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||+|.+..+++.||+|++++...........+.+|+.+++.++||||+++++++..++.+|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765444555667788999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
+|..++... ..+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--------- 149 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--------- 149 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---------
Confidence 999988764 458999999999999999999997 79999999999999999999999999998532110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~ 211 (325)
T cd05594 150 ------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211 (325)
T ss_pred ------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC
Confidence 01112457999999999999988999999999999999999999999998888777777776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhcc
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
...++. ..+..+.+||.+||++||.+|++.. +.+.++++||||+++.|......
T Consensus 212 ~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~ 266 (325)
T cd05594 212 EIRFPR--TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEK 266 (325)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 666654 3688999999999999999998321 12999999999999999977543
No 61
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.8e-41 Score=381.32 Aligned_cols=269 Identities=37% Similarity=0.740 Sum_probs=226.0
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999875432333445566788888764 999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---------
Confidence 9999999764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~ 211 (316)
T cd05619 150 ------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD 211 (316)
T ss_pred ------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01122457999999999999988999999999999999999999999998888777777665
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH-HHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~-elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. ..+..+.+||.+||+.||++||+ +. ++++||||+.++|..+.....+....|.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05619 212 NPCYPR--WLTREAKDILVKLFVREPERRLG----VKGDIRQHPFFREIDWSALEEREIEPPFKPK 271 (316)
T ss_pred CCCCCc--cCCHHHHHHHHHHhccCHhhcCC----ChHHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 544443 36788999999999999999999 64 8999999999999988655443333443
No 62
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.5e-41 Score=381.51 Aligned_cols=278 Identities=35% Similarity=0.666 Sum_probs=236.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCeEEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+|...+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788899999999999999999999999999998754434445566778888988885 578889999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~--- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG--- 155 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC---
Confidence 999999999998764 459999999999999999999999999999999999999999999999999985321100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 156 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (323)
T cd05615 156 ------------------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 211 (323)
T ss_pred ------------------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 01224569999999999999889999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.+......+|. ..+..+.+|+.+||..+|.+|++.. +..+++++||||+.++|..+.....+....|.
T Consensus 212 ~i~~~~~~~p~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05615 212 SIMEHNVSYPK--SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPK 280 (323)
T ss_pred HHHhCCCCCCc--cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCc
Confidence 88887766654 3678899999999999999999864 34789999999999999988655433333343
No 63
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.9e-41 Score=383.40 Aligned_cols=267 Identities=38% Similarity=0.740 Sum_probs=224.9
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+ +||||++++++|...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876554555667788899999988 799999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---------- 148 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc----------
Confidence 9999988764 4599999999999999999999999999999999999999999999999999843110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---------ChH
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---------TRQ 904 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~---------~~~ 904 (1002)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||... ...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05588 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence 001123457999999999999999999999999999999999999999631 112
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccCCC
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
.....+.......|. .++..+.+||.+||+.||.+|++.. ..++++++||||+.++|..+...+..
T Consensus 212 ~~~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~ 279 (329)
T cd05588 212 YLFQVILEKQIRIPR--SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVL 279 (329)
T ss_pred HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCC
Confidence 234445555555543 4688899999999999999999853 23789999999999999988655443
No 64
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.3e-41 Score=380.62 Aligned_cols=270 Identities=40% Similarity=0.787 Sum_probs=228.1
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+ +||||+++++++..++.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999875443444455666777777654 899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--------- 149 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---------
Confidence 9999998764 45999999999999999999999999999999999999999999999999998542110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 211 (316)
T cd05592 150 ------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND 211 (316)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999988999999999999999999999999998888887777665
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. .++..+.+||.+||..||.+||+. ..++++||||+.++|..+.....+....|.
T Consensus 212 ~~~~~~--~~~~~~~~ll~~~l~~~P~~R~~~---~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05592 212 RPHFPR--WISKEAKDCLSKLFERDPTKRLGV---DGDIRQHPFFRGIDWERLEKREIPPPFKPK 271 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 544443 368889999999999999999983 358899999999999988765555444443
No 65
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.2e-41 Score=381.04 Aligned_cols=273 Identities=39% Similarity=0.731 Sum_probs=231.3
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++...........+..|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876544455566778899999888 799999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 149 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--------- 149 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999988432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~ 211 (318)
T cd05570 150 ------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211 (318)
T ss_pred ------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 01122457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. ..+..+.+||.+||..||.+||+.. ..+.++++||||+.++|.............|.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (318)
T cd05570 212 EVRYPR--WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPK 275 (318)
T ss_pred CCCCCC--cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 665554 3688999999999999999999931 12299999999999999887654444333343
No 66
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.2e-41 Score=372.08 Aligned_cols=272 Identities=32% Similarity=0.555 Sum_probs=225.4
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCch
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|+||.||++.++.+|+.||+|.+.............+..|+++++.++||||+++++++..+.++|+||||+.|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999999999999999999764433333344556799999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001865 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++.......++...+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-----------
Confidence 988876555568999999999999999999999999999999999999999999999999985432110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHHHh
Q 001865 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANILH 912 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~ 912 (1002)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||..... .........
T Consensus 150 -----------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05607 150 -----------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE 212 (277)
T ss_pred -----------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc
Confidence 11224689999999999988899999999999999999999999976432 233333333
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001865 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
.....+ ....+.++.+||.+||++||++||++.+..++++.||||+.++|..++....|..++|
T Consensus 213 ~~~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05607 213 DEVKFE-HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFVP 276 (277)
T ss_pred cccccc-cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCCCCCCC
Confidence 333332 2346888999999999999999999877779999999999999999976555544443
No 67
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.1e-41 Score=379.49 Aligned_cols=270 Identities=39% Similarity=0.736 Sum_probs=226.2
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+ +||||+++++++...+++|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4689999999999999999999999999875433333455667788888754 899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999988432100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (316)
T cd05620 150 ------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD 211 (316)
T ss_pred ------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999999999999999999999999999999998888777777666
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. ..+.++.+||.+||..||++||+. .+++++||||+.++|..+.....+....|.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~~~---~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05620 212 TPHYPR--WITKESKDILEKLFERDPTRRLGV---VGNIRGHPFFKTINWTALEKRELDPPFKPK 271 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 555544 368899999999999999999992 358999999999999987544433333343
No 68
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.5e-41 Score=387.23 Aligned_cols=268 Identities=36% Similarity=0.660 Sum_probs=227.9
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++..++++
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 34568999999999999999999999999999999999764333444455677899999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||++++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999998753 4899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~----~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
. .......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred C--------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 0 01123457999999999997543 77899999999999999999999999
Q ss_pred CChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCC---CCCChhcHHHHHcCCCcCCCChhhh
Q 001865 901 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS---RLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~---Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
.+....+..+.... +.++.....+..+++||.+||. +|.. |++ ++++++||||++..|...
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~----~~ei~~h~~~~~~~~~~~ 315 (371)
T cd05622 250 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNG----VEEIKRHLFFKNDQWAWE 315 (371)
T ss_pred CCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCC----HHHHhcCcccCCCChhHH
Confidence 88888888887643 4566666689999999999998 5554 556 999999999999666443
No 69
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.4e-41 Score=382.04 Aligned_cols=267 Identities=42% Similarity=0.739 Sum_probs=228.5
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+|+.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654333344455556655 46778999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--------- 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--------- 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---------
Confidence 9999988764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~ 211 (325)
T cd05604 150 ------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211 (325)
T ss_pred ------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCC
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
....+. ..+..+.++|.+||..+|.+||+..+.+.++++||||+.++|..+.....|
T Consensus 212 ~~~~~~--~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~ 268 (325)
T cd05604 212 PLVLRP--GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIP 268 (325)
T ss_pred CccCCC--CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCCC
Confidence 554433 468889999999999999999998888899999999999999988654433
No 70
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.7e-41 Score=371.35 Aligned_cols=272 Identities=32% Similarity=0.588 Sum_probs=223.5
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCch
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|+||+||++.+..+++.||+|.+.+...........+..|+.+++.++|+||+++++++...+.+|+|||||++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999999999999999999765443444456678899999999999999999999999999999999999999
Q ss_pred hHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001865 757 FLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 757 ~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
..++.. .....+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 888743 223468999999999999999999999999999999999999999999999999985432110
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH----HHHHHH
Q 001865 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ----KTFANI 910 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~----~~~~~i 910 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+
T Consensus 152 ------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 213 (280)
T cd05608 152 ------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI 213 (280)
T ss_pred ------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh
Confidence 0112357899999999999999999999999999999999999999765432 222333
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001865 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
......++ ...+..+.+|+.+||+.||++||++.+ .++++++||||+.++|..+.....|....|
T Consensus 214 ~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~ 279 (280)
T cd05608 214 LNDSVTYP--DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP 279 (280)
T ss_pred cccCCCCc--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCC
Confidence 33322222 346889999999999999999996543 499999999999999998866555444443
No 71
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-42 Score=380.54 Aligned_cols=305 Identities=37% Similarity=0.635 Sum_probs=251.4
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
++..-|..++.||=|+||.|.+|+-..|...||+|.+++..+..++.+..+..|..||..-+++-||+||..|++.+.+|
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence 56678999999999999999999999999999999999887888888888999999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||+|++||++-.+|.+. +.+.+..+++|+..+.+|++++|+.|+|||||||+|||||.+|++||+|||++.-+....
T Consensus 706 FVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred EEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999999999885 569999999999999999999999999999999999999999999999999986443221
Q ss_pred CCCCCcchhhhhcccCCCCCccc---------------ccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFM---------------AEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~e 890 (1002)
...+....+..|.......+.+. ..........+||+.|+|||++....|+..||.||.|||||+
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 11111111111111000000000 011123346799999999999999999999999999999999
Q ss_pred HHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhc
Q 001865 891 MLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 891 lltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
|+.|++||...+..+...+++. ..+.++....++.++.+||+++++ +++.|+. +..++++..||||++++|..++.
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLG-kng~d~vKaHpfFkgIDfsslRk 941 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLG-KNGADQVKAHPFFKGIDFSSLRK 941 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhc-ccchhhhhcCccccccchHhhhh
Confidence 9999999998887776666653 345667777789999999998774 8899998 55688999999999999999988
Q ss_pred cCCCCC
Q 001865 969 MNPPEL 974 (1002)
Q Consensus 969 ~~~~~~ 974 (1002)
..-|=+
T Consensus 942 q~ApYI 947 (1034)
T KOG0608|consen 942 QRAPYI 947 (1034)
T ss_pred ccCCcC
Confidence 776633
No 72
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-42 Score=370.70 Aligned_cols=262 Identities=31% Similarity=0.487 Sum_probs=235.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
-+-|.+.+.||+|-|++|-+|++..||..||||++.+..+.+ .....+.+|+.+|+.++|||||++|++...+..+|+|
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 367999999999999999999999999999999999876543 4456788899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEE-ecCCcEEEEeccCCcccCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl-~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
+|+-++|+|++|+.+.. ..+++..++.|+.||+.|+.|+|+..+|||||||+|+.| .+-|-|||.|||++..+.+
T Consensus 96 LELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P--- 171 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP--- 171 (864)
T ss_pred EEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCC---
Confidence 99999999999998764 449999999999999999999999999999999999876 4678999999999854321
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~-~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
...-.+.||++.|-|||+|.+..|+ +++||||||||||-|++|++||...++.+
T Consensus 172 -------------------------G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE 226 (864)
T KOG4717|consen 172 -------------------------GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE 226 (864)
T ss_pred -------------------------cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh
Confidence 1234578999999999999999886 48999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
.+..|+......|.. .+.++++||++||..||.+|.+ +++|..|+|++.++-.+
T Consensus 227 TLTmImDCKYtvPsh--vS~eCrdLI~sMLvRdPkkRAs----lEeI~s~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 227 TLTMIMDCKYTVPSH--VSKECRDLIQSMLVRDPKKRAS----LEEIVSTSWLQAGDRGL 280 (864)
T ss_pred hhhhhhcccccCchh--hhHHHHHHHHHHHhcCchhhcc----HHHHhccccccCCCCCc
Confidence 999999988777765 6899999999999999999999 99999999999976543
No 73
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5.3e-41 Score=371.95 Aligned_cols=280 Identities=33% Similarity=0.563 Sum_probs=229.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999999999999999976544333344566789999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG----- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-----
Confidence 999999998886654456999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
......+|++.|+|||++.+..++.++||||+||++|+|++|..||.+.........
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05605 156 -----------------------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE 212 (285)
T ss_pred -----------------------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH
Confidence 011234689999999999988899999999999999999999999988665433322
Q ss_pred HHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001865 910 ILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 910 i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+... ..........+..+.+||.+||..||.+||++. +.+.++++||||...+|..+.....+....|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05605 213 VERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP 283 (285)
T ss_pred HHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCC
Confidence 2211 111112234678899999999999999999322 1289999999999999999966555444443
No 74
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.3e-41 Score=379.77 Aligned_cols=265 Identities=38% Similarity=0.739 Sum_probs=222.7
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++...........+.+|+.++.++ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555666788899888776 899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--------- 149 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--------- 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---------
Confidence 9999888764 45999999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC---------CChH
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---------KTRQ 904 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~---------~~~~ 904 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.. ....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05618 150 ------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 211 (329)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence 0112345799999999999999999999999999999999999999952 1122
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccC
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
.....+......+|. ..+..+.+||.+||..||.+||++. ..+.++++||||+.++|......+
T Consensus 212 ~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~ 277 (329)
T cd05618 212 YLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQ 277 (329)
T ss_pred HHHHHHhcCCCCCCC--CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCC
Confidence 334445555555554 4678899999999999999999853 236899999999999998885543
No 75
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.8e-41 Score=379.17 Aligned_cols=277 Identities=37% Similarity=0.689 Sum_probs=230.2
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++...........+.+|+.++.++ +||||+.+++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876554555667788899999888 699999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--------- 149 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--------- 149 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999988532100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-------ChHHH
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-------TRQKT 906 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~-------~~~~~ 906 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... .....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~ 211 (327)
T cd05617 150 ------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211 (327)
T ss_pred ------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence 01123467999999999999999999999999999999999999999532 22234
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCc
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 982 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 982 (1002)
...+......+|. ..+..+.++|.+||..||.+|++.. ..++++++||||+.++|..+.....+....|....+
T Consensus 212 ~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
T cd05617 212 FQVILEKPIRIPR--FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDD 287 (327)
T ss_pred HHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCCC
Confidence 4444454444443 3678899999999999999999843 236899999999999999997766665555554333
No 76
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-41 Score=360.12 Aligned_cols=261 Identities=26% Similarity=0.453 Sum_probs=222.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC-cceeEEEEeeCC----
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKT---- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~---- 742 (1002)
...|..+++||+|+||+||+|+.+.+|+.||+|.++-.... ........+|+.+|+.|+|+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 45788999999999999999999999999999999865321 123345678999999999999 999999998877
Q ss_pred --eEEEEEeccCCCchhHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001865 743 --HVCLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~~--~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
.+++||||+ .-+|..++..... ..++...++.++.||+.||+|||+++|+||||||+||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 8899999987543 35788999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+... .+....+..++|..|+|||++.+. .|+...||||+|||++||+++++.
T Consensus 168 ra~~---------------------------ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 168 RAFS---------------------------IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHhc---------------------------CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 7543 122335567899999999999987 788999999999999999999999
Q ss_pred CCCCChHHHHHHHHhC-----CCCC-------------CCC----------CCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001865 898 FRGKTRQKTFANILHK-----DLKF-------------PSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~-----~~~~-------------~~~----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
|+|.+.......|.+- ...| +.. +..+....+|+.+||+++|.+|.| +
T Consensus 221 FpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S----a 296 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRIS----A 296 (323)
T ss_pred CCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcC----H
Confidence 9999998888888651 1111 111 112347889999999999999999 9
Q ss_pred HHHHcCCCcCCC
Q 001865 950 NEIKKHPFFKGV 961 (1002)
Q Consensus 950 ~elL~Hp~f~~~ 961 (1002)
+.+|.||||...
T Consensus 297 ~~al~h~yf~~~ 308 (323)
T KOG0594|consen 297 KGALTHPYFSEL 308 (323)
T ss_pred HHHhcChhhccc
Confidence 999999999985
No 77
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.9e-41 Score=377.90 Aligned_cols=265 Identities=45% Similarity=0.794 Sum_probs=225.2
Q ss_pred cccccccCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 674 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
++.||+|+||.||+|++. .+++.||+|++++.... .......+.+|+.+|+.++||||++++++|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 46889999999864322 22334566789999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 153 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE----- 153 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-----
Confidence 99999999999764 45889999999999999999999999999999999999999999999999998532110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 154 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~ 211 (323)
T cd05584 154 ----------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK 211 (323)
T ss_pred ----------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 0112235799999999999998899999999999999999999999999888888888
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhcc
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
+..+...++. ..+..+.+||.+||+.+|++||+.. ..++++++||||+..+|..+...
T Consensus 212 ~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~~ 270 (323)
T cd05584 212 ILKGKLNLPP--YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLAR 270 (323)
T ss_pred HHcCCCCCCC--CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhcC
Confidence 8877665554 4678899999999999999999321 12999999999999999888543
No 78
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.2e-41 Score=383.14 Aligned_cols=273 Identities=40% Similarity=0.718 Sum_probs=229.6
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
||+|+||+||+|.+..+++.||+|++.+..............|..++..+ +||||+.+++++...+.+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999765443334445556677777655 799999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--------- 149 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--------- 149 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998542111
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHh
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 912 (1002)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~ 211 (330)
T cd05586 150 ------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF 211 (330)
T ss_pred ------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence 0112345799999999998764 478899999999999999999999999888888888877
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCC
Q 001865 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 979 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 979 (1002)
+...++.. ..+..+.+||.+||..||.+||+..+.+.++++||||+.++|..+.....+....|..
T Consensus 212 ~~~~~~~~-~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~ 277 (330)
T cd05586 212 GKVRFPKN-VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKPIV 277 (330)
T ss_pred CCCCCCCc-cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCccCCC
Confidence 76666543 3678899999999999999999877779999999999999999886554443344443
No 79
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.1e-41 Score=378.71 Aligned_cols=264 Identities=39% Similarity=0.707 Sum_probs=225.3
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHH-HHHHhCCCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER-EILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|. .+++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999865332223333444444 456788999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--------- 149 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--------- 149 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---------
Confidence 9999999764 45889999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (325)
T cd05602 150 ------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 211 (325)
T ss_pred ------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhcc
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
...++ ...+..+.+||.+||+.||.+|++..+.+.++++|+||..++|..+...
T Consensus 212 ~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~~ 265 (325)
T cd05602 212 PLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINK 265 (325)
T ss_pred CcCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHhC
Confidence 55443 3468899999999999999999998888899999999999999988543
No 80
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-43 Score=377.22 Aligned_cols=258 Identities=27% Similarity=0.433 Sum_probs=227.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|..+..||+|+||.||++.+..+++.||+|++.... .......+.+|+.+|..++++||.++|+.|..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 46888899999999999999999999999999998543 3456778899999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.||++.++++.. ..+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||++..+..
T Consensus 91 ey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~----- 163 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN----- 163 (467)
T ss_pred HHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec-----
Confidence 999999999999763 4468999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
......+++|||.|||||++.+..|+.++||||||++.|||++|.+||....+...+.
T Consensus 164 ----------------------~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf 221 (467)
T KOG0201|consen 164 ----------------------TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF 221 (467)
T ss_pred ----------------------hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE
Confidence 1122367899999999999999899999999999999999999999999888765555
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.|-+...+.... ..++.+++|+..||.+||+.||+ |.+||+|+|++...
T Consensus 222 lIpk~~PP~L~~-~~S~~~kEFV~~CL~k~P~~Rps----A~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 222 LIPKSAPPRLDG-DFSPPFKEFVEACLDKNPEFRPS----AKELLKHKFIKRAK 270 (467)
T ss_pred eccCCCCCcccc-ccCHHHHHHHHHHhhcCcccCcC----HHHHhhhHHHHhcC
Confidence 554444433333 67888999999999999999999 99999999999843
No 81
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-40 Score=377.21 Aligned_cols=273 Identities=38% Similarity=0.678 Sum_probs=228.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++..++|+||+.+++++..++++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998643334445566788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++.+. ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 157 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-- 157 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--
Confidence 999999999999753 34589999999999999999999999999999999999999999999999999854321100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
......+||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 158 ------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred ------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 01123469999999999863 4567899999999999999999999998887
Q ss_pred HHHHHHHHhCC--CCCCCC-CCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCC
Q 001865 904 QKTFANILHKD--LKFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 904 ~~~~~~i~~~~--~~~~~~-~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
.+.+..+.... ..++.. ...+..+++||++||..++.. |++ ++++++||||++++|..+....+|
T Consensus 214 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~----~~~~l~hp~~~~~~~~~~~~~~~~ 283 (331)
T cd05597 214 VETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNG----LQDFKDHPFFEGIDWDNIRNSTAP 283 (331)
T ss_pred HHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCCCCCCCCHHHHhhCCCC
Confidence 77777776543 223222 346889999999998754333 667 999999999999999999876665
No 82
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-41 Score=375.09 Aligned_cols=259 Identities=28% Similarity=0.433 Sum_probs=221.4
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeE-EEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~-~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.+.++.....+...||.|+||+||++.+ .|.. +|+|++......... ...+.+|+.+|.+++|||||++++++...
T Consensus 35 ~~~i~~~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~ 111 (362)
T KOG0192|consen 35 EEEIDPDELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSP 111 (362)
T ss_pred ceecChHHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3456667778888899999999999999 4445 999999876443333 77899999999999999999999999988
Q ss_pred C-eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-cccCCCCCCcEEEecCC-cEEEEeccCC
Q 001865 742 T-HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG-HVSLTDFDLS 818 (1002)
Q Consensus 742 ~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g-IiHrDLKP~NILl~~~g-~vkL~DFG~a 818 (1002)
. ..++|||||++|+|.+++.......++...+..++.||+.||.|||+++ ||||||||+|||++.++ ++||+|||++
T Consensus 112 ~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGls 191 (362)
T KOG0192|consen 112 PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLS 191 (362)
T ss_pred CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccc
Confidence 7 7999999999999999998744567999999999999999999999999 99999999999999998 9999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc--CCCCCChhhHHHHHHHHHHHHcCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~--~~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
+...... .......||+.|||||++. ...|+.++||||||+++|||++|+.
T Consensus 192 r~~~~~~---------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~ 244 (362)
T KOG0192|consen 192 REKVISK---------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI 244 (362)
T ss_pred eeecccc---------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC
Confidence 6643211 1123367999999999999 5689999999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
||.+.........+..+....+....+++.+..|+.+||..||..||++.+.+..
T Consensus 245 Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~ 299 (362)
T KOG0192|consen 245 PFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSR 299 (362)
T ss_pred CCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence 9999988777777766555554444588899999999999999999998765443
No 83
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9.7e-41 Score=376.39 Aligned_cols=263 Identities=43% Similarity=0.756 Sum_probs=225.2
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHH-HHHhCCCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+|||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654333333445555554 67889999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--------- 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---------
Confidence 9999888764 45899999999999999999999999999999999999999999999999988532100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (321)
T cd05603 150 ------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK 211 (321)
T ss_pred ------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999988999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhc
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
...++. ..+..+.++|.+||+.||.+|++....+.++++||||..++|..+..
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T cd05603 212 PLQLPG--GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYH 264 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhc
Confidence 655543 46788999999999999999999777788999999999999998754
No 84
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=376.79 Aligned_cols=295 Identities=37% Similarity=0.631 Sum_probs=261.6
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
++...+++++..||-|+||.|-++........+|+|++++..+.+......+..|.+||...++|+||++|..|.++.++
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 45567899999999999999999998777667999999998888888888899999999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|++||-|-||.|+..+..+ +.+.+...++|+..+++|++|||++|||.|||||+|+|++.+|.+||.|||+|+.+...
T Consensus 496 YmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999999875 56999999999999999999999999999999999999999999999999999765422
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
....++||||.|.|||++.+..++.++|.||||+++|||++|.+||.+.++.
T Consensus 574 ----------------------------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 574 ----------------------------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred ----------------------------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 2345799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC-hhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCcc
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 983 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~ 983 (1002)
..+..|+++--.+.-+..+...+.+||+++++.+|.+|+.. ...+.+|.+|.||.+++|..++..+-|.+..|.++-+.
T Consensus 626 ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~pt 705 (732)
T KOG0614|consen 626 KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPT 705 (732)
T ss_pred HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcc
Confidence 99999998743322224467889999999999999999985 45699999999999999999977666666678877766
Q ss_pred cccccc
Q 001865 984 EKEYKV 989 (1002)
Q Consensus 984 ~~~~~~ 989 (1002)
.-.|+.
T Consensus 706 D~s~Fd 711 (732)
T KOG0614|consen 706 DVSNFD 711 (732)
T ss_pred cchhcc
Confidence 555543
No 85
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.4e-40 Score=368.57 Aligned_cols=257 Identities=26% Similarity=0.383 Sum_probs=212.4
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|+++.... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 479999999999999999999999999999999976422 2334566788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++++.|..+... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 155 (287)
T cd07848 80 EYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-- 155 (287)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc--
Confidence 99988766655433 24589999999999999999999999999999999999999999999999999865321110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|++||.+.+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~ 211 (287)
T cd07848 156 ------------------------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211 (287)
T ss_pred ------------------------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 11123568999999999998889999999999999999999999998876655443
Q ss_pred HHHhCC-------------------CCCCCC-----------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 909 NILHKD-------------------LKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~-------------------~~~~~~-----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+.... ..++.. ...+..+.+||++||++||++||| ++++|+||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s----~~~~l~hp~f 287 (287)
T cd07848 212 TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYL----TEQCLNHPAF 287 (287)
T ss_pred HHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 332210 011110 125678999999999999999999 9999999998
No 86
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.9e-40 Score=375.88 Aligned_cols=279 Identities=43% Similarity=0.754 Sum_probs=224.7
Q ss_pred CccccccccccCcEEEEEEEEc---CCCeEEEEEEeecccccC-hHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
+|++++.||+|+||.||+|++. .+++.||+|++.+..... ......+..|+.+++.+ +||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4899999999999999999874 468999999997643222 23345677899999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999998764 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC--
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~-- 901 (1002)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||...
T Consensus 159 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 212 (332)
T cd05614 159 E--------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212 (332)
T ss_pred C--------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC
Confidence 0 0112245799999999999875 4788999999999999999999999643
Q ss_pred --ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001865 902 --TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 902 --~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
........+......++ ...+..+.+||.+||..||++||+.. +.++++++||||+..+|..+.....+....|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
T cd05614 213 RNTQSEVSRRILKCDPPFP--SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPS 290 (332)
T ss_pred CCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 22333444444443333 34688999999999999999999432 23899999999999999888654333333343
No 87
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-40 Score=377.11 Aligned_cols=277 Identities=37% Similarity=0.662 Sum_probs=230.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++++..+++.||+|++.+...........+.+|+.++..++|+||+++++++...++.|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997643333444556778999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.||+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-- 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-- 157 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc--
Confidence 9999999999997642 4589999999999999999999999999999999999999999999999999855321100
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 158 ------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred ------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 01123579999999999875 4577899999999999999999999999888
Q ss_pred HHHHHHHHhCC--CCCCCC-CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001865 904 QKTFANILHKD--LKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 904 ~~~~~~i~~~~--~~~~~~-~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
.+.+..+.... +.++.. ...+..+.+||.+||+.++. |+. ...++++++||||+.++|..+....+|..
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~-~~~-~~~~~~~~~h~~f~~~~~~~~~~~~~~~~ 285 (331)
T cd05624 214 VETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRER-RLG-QNGIEDFKKHAFFEGIDWENIRNLEAPYI 285 (331)
T ss_pred HHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchh-hcC-CCCHHHHhcCCCcCCCCHHHHhhCCCCcc
Confidence 88777776643 333332 33688999999999986554 432 12299999999999999999988776644
No 88
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.1e-41 Score=382.27 Aligned_cols=253 Identities=29% Similarity=0.498 Sum_probs=219.9
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-C-----CCcceeEEEEeeCCe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-----PFVPALYASFQTKTH 743 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-----pnIv~l~~~~~~~~~ 743 (1002)
+|.+++.||+|+||+|.+|.+..|++.||||+++.. +....+...|+.+|..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 899999999999999999999999999999999864 556677788999999996 4 399999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC--cEEEEeccCCccc
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCLT 821 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g--~vkL~DFG~a~~~ 821 (1002)
.|||+|++ +.+|.++++.+....++...++.|+.||+.||.+||++||||+||||+|||+..-+ .|||+|||.|+..
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999999 99999999998888899999999999999999999999999999999999998543 6999999999764
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .-+++.+..|+|||++.|.+|+.+.||||||||++||++|.+.|+|.
T Consensus 342 ~q~------------------------------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 342 SQR------------------------------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CCc------------------------------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 311 11567899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhC--------------------C-C-------------------------------CCC-CC-------C
Q 001865 902 TRQKTFANILHK--------------------D-L-------------------------------KFP-SS-------T 921 (1002)
Q Consensus 902 ~~~~~~~~i~~~--------------------~-~-------------------------------~~~-~~-------~ 921 (1002)
+..+.+..|++- . . ..| .. .
T Consensus 392 ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~ 471 (586)
T KOG0667|consen 392 NEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLP 471 (586)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcc
Confidence 988888777541 0 0 001 00 0
Q ss_pred -CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 922 -PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 922 -~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.....+.+||.+||.+||.+|+| ..++|+||||+..
T Consensus 472 ~~~~~~F~dflk~~L~~dP~~R~t----p~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 472 KADDKLFIDFLKRCLEWDPAERIT----PAQALNHPFLTGT 508 (586)
T ss_pred cccHHHHHHHHHHHhccCchhcCC----HHHHhcCcccccc
Confidence 11235789999999999999999 9999999999964
No 89
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.9e-40 Score=375.78 Aligned_cols=275 Identities=36% Similarity=0.642 Sum_probs=229.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 37999999999999999999999999999999997643333344455778999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+|+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 999999999999764 2458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.......+||+.|+|||++. ...++.++|||||||++|+|++|+.||...+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred -----------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 01112357999999999986 34578899999999999999999999999888
Q ss_pred HHHHHHHHhCCC--CCCCC-CCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001865 904 QKTFANILHKDL--KFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 904 ~~~~~~i~~~~~--~~~~~-~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
.+.+..+..... .++.. ..++..+++||.+||..++.. |++ ++++++||||.+++|..+.....|.+
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~----~~~~~~h~~f~~~~~~~~~~~~~~~~ 285 (332)
T cd05623 214 VETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNG----IEDFKQHPFFTGIDWDNIRNCEAPYI 285 (332)
T ss_pred HHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCC----HHHHhCCCCcCCCCHHHHhhCCCCcc
Confidence 888888876543 23332 346889999999999765544 567 99999999999999999977665544
No 90
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=8.5e-41 Score=376.36 Aligned_cols=266 Identities=43% Similarity=0.768 Sum_probs=228.1
Q ss_pred cccccccCcEEEEEEEE---cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 674 IKPLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~---~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
++.||+|+||.||++++ ..+|+.||+|++.+... .......+.+|++++++++||||+++++++..++.+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 36799999999999987 35789999999986532 222345567899999999999999999999999999999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----- 152 (318)
T cd05582 80 LRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE----- 152 (318)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-----
Confidence 9999999999764 458999999999999999999999999999999999999999999999999985432110
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i 910 (1002)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+
T Consensus 153 ----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 153 ----------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred ----------------------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 1122457999999999999888899999999999999999999999998888888888
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccCC
Q 001865 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNP 971 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~~ 971 (1002)
......++. ..+..+.+||.+||+.||++||++.+ .++++++||||..++|..+.....
T Consensus 211 ~~~~~~~p~--~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (318)
T cd05582 211 LKAKLGMPQ--FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREI 270 (318)
T ss_pred HcCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCC
Confidence 777665554 36788999999999999999999654 478899999999999998865443
No 91
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.9e-40 Score=368.11 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=213.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||.|+||.||+|.+..++..||+|+++.... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 4689999999999999999999999999999999875421 22234567899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||++ ++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--- 156 (288)
T cd07871 82 FEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--- 156 (288)
T ss_pred EeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---
Confidence 99995 5899888654 345899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~ 212 (288)
T cd07871 157 ------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE 212 (288)
T ss_pred ------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011223468999999999875 5688899999999999999999999998877666
Q ss_pred HHHHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+.... ..++. ....+.++++||.+||++||.+||| ++|+|+||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t----~~~~l~hp~f 288 (288)
T cd07871 213 LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS----AEAALRHSYF 288 (288)
T ss_pred HHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHhcCCCC
Confidence 65554311 00111 1235778999999999999999999 9999999998
No 92
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.9e-40 Score=370.77 Aligned_cols=261 Identities=25% Similarity=0.408 Sum_probs=210.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++......|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875421 22234567899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 82 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 156 (303)
T cd07869 82 FEYV-HTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP--- 156 (303)
T ss_pred EECC-CcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC---
Confidence 9999 57888887654 245899999999999999999999999999999999999999999999999998542211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 905 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~-~ 905 (1002)
........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.... .
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 212 (303)
T cd07869 157 ------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD 212 (303)
T ss_pred ------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 011223468999999999865 45788999999999999999999999875432 2
Q ss_pred HHHHHHhC--CC---CCC-------------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 906 TFANILHK--DL---KFP-------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 906 ~~~~i~~~--~~---~~~-------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.+..+... .. .++ .....+..+.+||.+||++||.+||| +.++|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s----~~~~l~h 288 (303)
T cd07869 213 QLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS----AQAALSH 288 (303)
T ss_pred HHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC----HHHHhcC
Confidence 23222210 00 000 00113457889999999999999999 9999999
Q ss_pred CCcCCCCh
Q 001865 956 PFFKGVNW 963 (1002)
Q Consensus 956 p~f~~~~~ 963 (1002)
|||+.+++
T Consensus 289 ~~f~~~~~ 296 (303)
T cd07869 289 EYFSDLPP 296 (303)
T ss_pred cccccCCh
Confidence 99998754
No 93
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=359.64 Aligned_cols=289 Identities=35% Similarity=0.654 Sum_probs=256.1
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCC
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
..+...+|..+..||.|+||.|.++..+.+...||||+++++.+....+.+--..|-.+|... +-|.+++++.+|+.-+
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 356678999999999999999999999999999999999998887777777777888888877 5689999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+.||+|--.+++- +.+.+..+..|+..|+-||-+||++|||.||||.+|||++.+|++||+|||++..--
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred heeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999999998888764 558999999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. ......++||||.|+|||.+...+|+.++|.||+||+||||+.|++||.|.+
T Consensus 502 ~---------------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 502 F---------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred c---------------------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 1 1123457899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCC
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 981 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 981 (1002)
..+.++.|......+|.. .|.++.++...+|.+.|.+|+..- +.-++|..||||+.++|+.++....+....|..++
T Consensus 555 E~elF~aI~ehnvsyPKs--lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~ 632 (683)
T KOG0696|consen 555 EDELFQAIMEHNVSYPKS--LSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKC 632 (683)
T ss_pred HHHHHHHHHHccCcCccc--ccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCcccc
Confidence 999999999999888876 689999999999999999999875 34568999999999999999766655556677654
Q ss_pred cc
Q 001865 982 DT 983 (1002)
Q Consensus 982 ~~ 983 (1002)
..
T Consensus 633 ~r 634 (683)
T KOG0696|consen 633 GR 634 (683)
T ss_pred CC
Confidence 43
No 94
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.1e-39 Score=369.38 Aligned_cols=262 Identities=24% Similarity=0.390 Sum_probs=218.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||+|.+..++..+|+|++.... .......+.+|+++|+.++||||+++++++..++.+|
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 44679999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999999999764 4589999999999999999999986 6999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 158 -----------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 158 -----------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred -----------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 112346899999999999988999999999999999999999999766544
Q ss_pred HHHHHHH----------------------------------------------hCCCCCCCCCCCCHHHHHHHHHccccC
Q 001865 905 KTFANIL----------------------------------------------HKDLKFPSSTPTSLHAKQLMYRLLHRD 938 (1002)
Q Consensus 905 ~~~~~i~----------------------------------------------~~~~~~~~~~~~s~~~~~Ll~~~L~~d 938 (1002)
+....+. ....+.......+.++++||.+||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~ 288 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN 288 (331)
T ss_pred HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC
Confidence 3322111 000011111235778999999999999
Q ss_pred cCCCCCChhcHHHHHcCCCcCCCChh
Q 001865 939 PKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 939 P~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
|++||| +++|++||||+.....
T Consensus 289 P~~Rpt----~~ell~h~~~~~~~~~ 310 (331)
T cd06649 289 PAERAD----LKMLMNHTFIKRSEVE 310 (331)
T ss_pred cccCCC----HHHHhcChHHhhcccc
Confidence 999999 9999999999875443
No 95
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.2e-41 Score=372.73 Aligned_cols=262 Identities=25% Similarity=0.451 Sum_probs=236.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe-EEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH-VCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~l 746 (1002)
++.|.+++++|.|+||.+++++++..++.||+|.+.-.....+.. ....+|..+++++.|||||.+.+.|..++. +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r-~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER-RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh-HHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 568999999999999999999999999999999998765544443 366789999999999999999999998887 999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+||+||+|.+.+.++.+..++++.+..++.||+.||.|||+++|+|||||+.|||++.++.|+|+|||+|+.+..+.
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 9999999999999998877889999999999999999999999999999999999999999999999999998765332
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
....+.+|||.||+||.+.+.+|+.++|||||||++|||++-+.+|.+.+-...
T Consensus 161 --------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L 214 (426)
T KOG0589|consen 161 --------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL 214 (426)
T ss_pred --------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH
Confidence 134578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
+.+|.+.. -.|.+...+.+++.||..||+.+|..||+ +.+||.+|.+...-
T Consensus 215 i~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPs----a~~LL~~P~l~~~~ 265 (426)
T KOG0589|consen 215 ILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPS----ALELLRRPHLLRYL 265 (426)
T ss_pred HHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCC----HHHHhhChhhhhHH
Confidence 99998876 34445557889999999999999999999 99999999988543
No 96
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.5e-39 Score=360.36 Aligned_cols=280 Identities=33% Similarity=0.560 Sum_probs=230.6
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|+..+.||.|+||+||++.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++++..++..|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 47788999999999999999999999999999976544333444567789999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG----- 155 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-----
Confidence 999999998887654456999999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~ 212 (285)
T cd05632 156 -----------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE 212 (285)
T ss_pred -----------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011234689999999999988899999999999999999999999988765444333
Q ss_pred HHhCC--CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc-HHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001865 910 ILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG-ANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 910 i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~-a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+.... .........+..+.+|+.+||+.||.+||++.+. +.++++|+||+.++|..+....-....+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05632 213 VDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVP 283 (285)
T ss_pred HHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCC
Confidence 33211 1112223467789999999999999999997644 88999999999999998755444433333
No 97
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.1e-39 Score=359.98 Aligned_cols=278 Identities=43% Similarity=0.770 Sum_probs=240.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||++.+..+++.+|+|++.+...........+.+|++++++++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 37999999999999999999999999999999998654444555677889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.+|.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999999999775 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+......
T Consensus 155 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 208 (290)
T cd05580 155 --------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE 208 (290)
T ss_pred --------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 123468999999999988888899999999999999999999999888777777
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC-hhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
.+..+...++.. .+..++++|.+||..||.+|++. .+.++++++||||+.++|..+....-+....|...
T Consensus 209 ~~~~~~~~~~~~--~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (290)
T cd05580 209 KILEGKVRFPSF--FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVK 279 (290)
T ss_pred HHhcCCccCCcc--CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCCC
Confidence 777666555543 57889999999999999999932 23499999999999999999976555555555543
No 98
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=369.87 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=221.1
Q ss_pred ccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee
Q 001865 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
...+.+....+++++.||+|.||.||++.+.. ...+|+|.++...+ ....+.+|+++|++|+|++||++++++..
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~ 272 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTK 272 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEec
Confidence 44567888899999999999999999999933 33799999987533 23567799999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+..+|||||||+.|+|.++|+...+..+...+...++.||++|++||+++++|||||...||||++++.|||+|||+|+.
T Consensus 273 ~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 273 QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccc
Confidence 88999999999999999999986677899999999999999999999999999999999999999999999999999984
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
...+.. ......--...|.|||++....++.+||||||||+||||+| |+.||.
T Consensus 353 ~~d~~Y--------------------------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~ 406 (468)
T KOG0197|consen 353 IGDDEY--------------------------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP 406 (468)
T ss_pred cCCCce--------------------------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC
Confidence 332111 01111123557999999999999999999999999999997 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+.+..+.+..+.++ ..+|.+..++.++.+++..||..+|++|||+..
T Consensus 407 ~msn~ev~~~le~G-yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 407 GMSNEEVLELLERG-YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred CCCHHHHHHHHhcc-CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 99999999887765 456666678999999999999999999999653
No 99
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.4e-39 Score=360.59 Aligned_cols=270 Identities=35% Similarity=0.619 Sum_probs=224.2
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|++|+.+++.+...+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 47788999999999999999999999999999876544444444567789999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-----
Confidence 999999999987654456999999999999999999999999999999999999999999999999988543210
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH---HH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ---KT 906 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~---~~ 906 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.... ..
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~ 212 (285)
T cd05630 156 -----------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 212 (285)
T ss_pred -----------------------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH
Confidence 0112346899999999999988999999999999999999999999875432 22
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhc
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
...+... .........+..+.+|+.+||+.||++|||+. ..++++++||||+.++|..++.
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~ 274 (285)
T cd05630 213 VERLVKE-VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEA 274 (285)
T ss_pred HHhhhhh-hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhc
Confidence 2222221 11112234678899999999999999999843 1378999999999999998866
No 100
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=9.6e-40 Score=370.70 Aligned_cols=263 Identities=25% Similarity=0.401 Sum_probs=211.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC-----CeE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~~ 744 (1002)
+|++.+.||+|+||.||+|.+..++..||||.+.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5899999999999999999999999999999987532 2233445788999999999999999999987543 358
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||| +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 67899988764 35899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. ........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+
T Consensus 157 ~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~ 212 (338)
T cd07859 157 TP------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 212 (338)
T ss_pred cC------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 00 0011234579999999999876 578889999999999999999999998766
Q ss_pred hHHHHHHHHh--------------------------CCCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 903 RQKTFANILH--------------------------KDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~--------------------------~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.......+.. .....+ ..+..+..+.+||.+||+.||++||+ +.++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~e~l 288 (338)
T cd07859 213 VVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT----AEEAL 288 (338)
T ss_pred hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC----HHHHh
Confidence 4433221111 000000 11235677899999999999999999 99999
Q ss_pred cCCCcCCCChh
Q 001865 954 KHPFFKGVNWA 964 (1002)
Q Consensus 954 ~Hp~f~~~~~~ 964 (1002)
+||||+++...
T Consensus 289 ~hp~f~~~~~~ 299 (338)
T cd07859 289 ADPYFKGLAKV 299 (338)
T ss_pred cCchhhhcCcc
Confidence 99999986654
No 101
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.7e-39 Score=360.34 Aligned_cols=256 Identities=26% Similarity=0.440 Sum_probs=209.9
Q ss_pred CCccccccccccCcEEEEEEEEcC-CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCcceeEEEEe-----
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ----- 739 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~----- 739 (1002)
++|++++.||+|+||.||+|.+.. +++.||+|.++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 379999999999999999999854 4788999998754322 22233455677777665 6999999999875
Q ss_pred eCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001865 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
....+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 345789999999 5799999987655668999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|++||.
T Consensus 159 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 159 IYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eccCC----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 43211 11234568999999999988889999999999999999999999999
Q ss_pred CCChHHHHHHHHhCCC-----CCCC--------------------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 900 GKTRQKTFANILHKDL-----KFPS--------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~-----~~~~--------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+.+..+.+..+..... .++. .+..+..+.+||.+||+.||++||| +.++|+
T Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~ 286 (290)
T cd07862 211 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALS 286 (290)
T ss_pred CCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC----HHHHhc
Confidence 9888777777654211 0100 1235677899999999999999999 999999
Q ss_pred CCCc
Q 001865 955 HPFF 958 (1002)
Q Consensus 955 Hp~f 958 (1002)
||||
T Consensus 287 hp~f 290 (290)
T cd07862 287 HPYF 290 (290)
T ss_pred CCCC
Confidence 9998
No 102
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-41 Score=371.16 Aligned_cols=260 Identities=27% Similarity=0.442 Sum_probs=227.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|.++..||.|+||.||+|..+.++...|-|++.. ........+.-||+||..++||+||++++.|..++.++|+
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence 3578899999999999999999999999999998863 3466778889999999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
.|||.||-...++-.- +..|++.++.-+++|++.||.|||+++|||||||..|||++-+|.++|+|||++....
T Consensus 108 iEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~----- 181 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK----- 181 (1187)
T ss_pred EeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch-----
Confidence 9999888887776543 4569999999999999999999999999999999999999999999999999984311
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.......+++|||+|||||+.. ..+|++++||||||++|.+|..+.+|-..-+
T Consensus 182 ----------------------~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln 239 (1187)
T KOG0579|consen 182 ----------------------STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN 239 (1187)
T ss_pred ----------------------hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc
Confidence 0112346789999999999974 4689999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 903 RQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
...++-+|.+...+ +..+...+..+.+||.+||.+||..||+ +.+||+||||++++
T Consensus 240 pMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~----aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 240 PMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP----AAQLLKHPFVQNAP 296 (1187)
T ss_pred hHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCC----HHHHhhCcccccCC
Confidence 98888888876544 3344456788999999999999999999 99999999999754
No 103
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=354.19 Aligned_cols=266 Identities=27% Similarity=0.459 Sum_probs=216.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--C---eE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T---HV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~---~~ 744 (1002)
.|...+.+|+|+||.||.+...++++.+|||.+-.+. ..--+|+++|+.++|||||++..+|... . +.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 6888999999999999999999999999999876442 1224699999999999999999888632 2 45
Q ss_pred EEEEeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCccc
Q 001865 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~ 821 (1002)
.+||||| .-+|.++++. ..+..++.-.++.++.||++||+|||+.||+||||||+|||+|.+ |.+||||||.|+..
T Consensus 98 nlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 6899999 7799998874 123558999999999999999999999999999999999999965 99999999999765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... ....++..|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|+|
T Consensus 177 ~~~----------------------------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 177 VKG----------------------------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred ccC----------------------------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 422 123466789999999999885 688999999999999999999999999
Q ss_pred CChHHHHHHHHhC-----------------CCCCC----------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 901 KTRQKTFANILHK-----------------DLKFP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 901 ~~~~~~~~~i~~~-----------------~~~~~----------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.+...++..|.+- ...+| .....++++.+|+.++|+++|.+|.+ +.|++
T Consensus 229 ~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~----~~~~l 304 (364)
T KOG0658|consen 229 DSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS----ALEAL 304 (364)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC----HHHHh
Confidence 9888777766541 11111 12335788999999999999999999 99999
Q ss_pred cCCCcCCCChhhhhccCCCCCCCC
Q 001865 954 KHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 954 ~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
.||||...--. ..+.|-..++|
T Consensus 305 ~h~fFdelr~~--~~~l~~g~~lp 326 (364)
T KOG0658|consen 305 AHPFFDELRDP--NTKLPNGRPLP 326 (364)
T ss_pred cchhhHHhhCc--CccCcCCCcCC
Confidence 99999874333 33334444444
No 104
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-39 Score=374.95 Aligned_cols=254 Identities=24% Similarity=0.365 Sum_probs=207.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+...+|++++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+|+.++||||++++++|..+...|
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 456789999999999999999999999999999996532 34678999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|||++ +++|..++... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|.......
T Consensus 160 lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999999 67898888664 458999999999999999999999999999999999999999999999999985421100
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC---
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--- 902 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~--- 902 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 237 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~ 290 (391)
T PHA03212 237 --------------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLD 290 (391)
T ss_pred --------------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence 011224579999999999999999999999999999999999998875432
Q ss_pred ----hHHHHHHHHhC--------------------------CCCCCC-------CCCCCHHHHHHHHHccccCcCCCCCC
Q 001865 903 ----RQKTFANILHK--------------------------DLKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 903 ----~~~~~~~i~~~--------------------------~~~~~~-------~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
....+..+... ....+. ....+.++.+||.+||++||.+|||
T Consensus 291 ~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpt- 369 (391)
T PHA03212 291 GDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPS- 369 (391)
T ss_pred ccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCC-
Confidence 11111111110 000000 0123557889999999999999999
Q ss_pred hhcHHHHHcCCCcCCC
Q 001865 946 HEGANEIKKHPFFKGV 961 (1002)
Q Consensus 946 ~~~a~elL~Hp~f~~~ 961 (1002)
+.|+|+||||+.+
T Consensus 370 ---a~elL~hp~f~~~ 382 (391)
T PHA03212 370 ---AEALLDFAAFQDI 382 (391)
T ss_pred ---HHHHhcChhhccC
Confidence 9999999999874
No 105
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-40 Score=363.25 Aligned_cols=261 Identities=26% Similarity=0.427 Sum_probs=213.0
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.++...|+++++||+||.+.||+|.... ...||+|.+... ..+......+.+|+.+|.+| +|.+|+++++|-..+++
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 4677899999999999999999999844 445666554332 34677788999999999999 79999999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+||||||- ..+|..+|++.. ..++...++.|..||+.|+.++|+.||||.||||.|+|+. .|.+||+|||.|..+..
T Consensus 435 lYmvmE~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 435 LYMVMECG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQP 511 (677)
T ss_pred EEEEeecc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence 99999988 899999998754 3355569999999999999999999999999999999998 78999999999976543
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-----------CCChhhHHHHHHHHHHHH
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEML 892 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~-----------~~~~sDIwSlGvil~ell 892 (1002)
+... -...+.+||+.||+||++.... .+.++||||||||||+|+
T Consensus 512 DTTs-------------------------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 512 DTTS-------------------------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV 566 (677)
T ss_pred cccc-------------------------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence 3222 2345679999999999995433 456899999999999999
Q ss_pred cCCCCCCCCC-hHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 893 YGYTPFRGKT-RQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 893 tG~~Pf~~~~-~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.|+.||.... ....+..|..- .+.||..+. ..+++++++.||.+||.+||+ +.+||+|||+..
T Consensus 567 YgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~s----i~eLLqhpFl~~ 632 (677)
T KOG0596|consen 567 YGKTPFGQIINQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWS----IPELLQHPFLQI 632 (677)
T ss_pred hcCCchHHHHHHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCC----cHHHhcCccccc
Confidence 9999997643 23333334332 345665543 234999999999999999999 999999999997
No 106
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.8e-39 Score=368.34 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=209.9
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.....+|+.++.||+|+||.||+|.+..+++.||||++.... .......+.+|+++++.++|+||+++++++..++.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 344678999999999999999999999999999999986542 334456788999999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||.+++|... ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 148 ~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 148 QVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999999998653 23567888999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
........||+.|+|||++.. ...+.++|||||||++|+|++|+.||.
T Consensus 222 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 222 ---------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred ---------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 011223579999999999743 234568999999999999999999997
Q ss_pred CCChH---HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 900 GKTRQ---KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 900 ~~~~~---~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..... .....+.. .........++..+.+||.+||..||++||+ +.++|+||||...
T Consensus 275 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt----~~ell~hp~~~~~ 334 (353)
T PLN00034 275 VGRQGDWASLMCAICM-SQPPEAPATASREFRHFISCCLQREPAKRWS----AMQLLQHPFILRA 334 (353)
T ss_pred CCCCccHHHHHHHHhc-cCCCCCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccccC
Confidence 43322 22222221 1222223456889999999999999999999 9999999999985
No 107
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6e-39 Score=363.60 Aligned_cols=259 Identities=24% Similarity=0.400 Sum_probs=215.8
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||.|+||.||++.+..++..+|+|++.... .......+.+|+++++.++||||++++++|..++.+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 45679999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
+||||+.+++|.+++... ..+++..+..++.||+.||.|||++ +|+|+||||+|||++.+|.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999999999764 4589999999999999999999985 7999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 158 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 158 -----------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred -----------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 112346899999999999888999999999999999999999999765443
Q ss_pred HHHHHH--------------------------------------------HhCCCCCCCCCCCCHHHHHHHHHccccCcC
Q 001865 905 KTFANI--------------------------------------------LHKDLKFPSSTPTSLHAKQLMYRLLHRDPK 940 (1002)
Q Consensus 905 ~~~~~i--------------------------------------------~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~ 940 (1002)
.....+ .....+.......+.++++||.+||++||+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~ 288 (333)
T cd06650 209 ELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPA 288 (333)
T ss_pred HHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcc
Confidence 322111 111101111112467889999999999999
Q ss_pred CCCCChhcHHHHHcCCCcCCC
Q 001865 941 SRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 941 ~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+||| +.++++||||+..
T Consensus 289 ~Rpt----~~ell~h~~~~~~ 305 (333)
T cd06650 289 ERAD----LKQLMVHAFIKRS 305 (333)
T ss_pred cCcC----HHHHhhCHHHhcC
Confidence 9999 9999999999864
No 108
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=348.29 Aligned_cols=256 Identities=26% Similarity=0.427 Sum_probs=224.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-|.++.+||+|+||.||+|.++++|..+|+|.+... .+...+..|+.||+++++|+||++|+.|.....+|+|||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 488999999999999999999999999999987643 467889999999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
||..|+..+.+..+ .+.|++..+..+++..++||+|||...-||||||..|||++.+|++||.|||.|..+
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL-------- 179 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQL-------- 179 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchh--------
Confidence 99999999999754 577999999999999999999999999999999999999999999999999998432
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.+.....+++.|||.|||||++....|+.++||||||++..+|..|++||....+...+-.
T Consensus 180 -------------------TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM 240 (502)
T KOG0574|consen 180 -------------------TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM 240 (502)
T ss_pred -------------------hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe
Confidence 2233445678999999999999999999999999999999999999999988776554433
Q ss_pred HHhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 910 ILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 910 i~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
|-... ..+..+...|.++.+|+++||.++|++|-| |-+|++|||+++..
T Consensus 241 IPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~T----A~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 241 IPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKT----ALRLCEHTFIKNAP 290 (502)
T ss_pred ccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHH----HHHHhhhhhhcCCC
Confidence 33222 223344446788999999999999999999 99999999999854
No 109
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7.8e-39 Score=368.49 Aligned_cols=261 Identities=27% Similarity=0.418 Sum_probs=214.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-----eE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (1002)
+|++.+.||+|+||.||++.+..+++.||+|.+... .........+.+|+.+++.++||||+++++++...+ .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478899999999999999999999999999998653 223345567889999999999999999999998776 89
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELM-QSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeecc-ccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999999 56888877553 45999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.. .......+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 210 (372)
T cd07853 157 ES--------------------------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP 210 (372)
T ss_pred cc--------------------------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH
Confidence 10 111234689999999999874 478899999999999999999999988776
Q ss_pred HHHHHHHHh-----------------------CCCCCC-------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 904 QKTFANILH-----------------------KDLKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~-----------------------~~~~~~-------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+..+.. .....+ .....+.++.+||.+||+.||.+||| +.++|
T Consensus 211 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l 286 (372)
T cd07853 211 IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRIS----AADAL 286 (372)
T ss_pred HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcC----HHHHh
Confidence 655544432 111111 11234778999999999999999999 99999
Q ss_pred cCCCcCCCChh
Q 001865 954 KHPFFKGVNWA 964 (1002)
Q Consensus 954 ~Hp~f~~~~~~ 964 (1002)
+||||++..+.
T Consensus 287 ~hp~~~~~~~~ 297 (372)
T cd07853 287 AHPYLDEGRLR 297 (372)
T ss_pred cCHhhCCCcch
Confidence 99999986543
No 110
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.9e-39 Score=377.97 Aligned_cols=256 Identities=26% Similarity=0.419 Sum_probs=207.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee-------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------- 740 (1002)
..+|++++.||+|+||.||+|.+..+++.||||.+.... ....+|+.+|+.++||||++++++|..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 468999999999999999999999999999999886431 223469999999999999999988743
Q ss_pred -CCeEEEEEeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-cEEEEecc
Q 001865 741 -KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFD 816 (1002)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g-~vkL~DFG 816 (1002)
..++++||||++ ++|.+++.. .....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus 138 ~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 235789999995 577777653 2345699999999999999999999999999999999999999665 79999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCC
Q 001865 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~ 895 (1002)
+|...... ......+||+.|+|||++.+. .++.++|||||||++|+|++|.
T Consensus 217 la~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 268 (440)
T PTZ00036 217 SAKNLLAG----------------------------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY 268 (440)
T ss_pred cchhccCC----------------------------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99643211 011235789999999998764 6899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhC-----------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 896 TPFRGKTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
+||.+.+..+.+..+... .+.++. ....+.++.+||.+||++||.+|||
T Consensus 269 ~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t---- 344 (440)
T PTZ00036 269 PIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN---- 344 (440)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC----
Confidence 999998777666655431 111111 1124678999999999999999999
Q ss_pred HHHHHcCCCcCCCCh
Q 001865 949 ANEIKKHPFFKGVNW 963 (1002)
Q Consensus 949 a~elL~Hp~f~~~~~ 963 (1002)
+.++|+||||..+..
T Consensus 345 a~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 345 PIEALADPFFDDLRD 359 (440)
T ss_pred HHHHhCChhHHhhhc
Confidence 999999999987543
No 111
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.8e-39 Score=367.18 Aligned_cols=255 Identities=25% Similarity=0.483 Sum_probs=208.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||++.+..+|+.||+|++.+.. ........+.+|+.+++.++||||+++++++...
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 579999999999999999999999999999999997642 2344556778899999999999999999998644
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+. ++|.+.+.. .++...+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 35799999994 567666643 3889999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 174 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 174 CTN----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccC----------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 210 0112347899999999999999999999999999999999999999877
Q ss_pred ChHHHHHHHHh----------------------CCCCCC--------------C----CCCCCHHHHHHHHHccccCcCC
Q 001865 902 TRQKTFANILH----------------------KDLKFP--------------S----STPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~----------------------~~~~~~--------------~----~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+....+..+.. ....++ . ....+..+.+||.+||+.||++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 305 (359)
T cd07876 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDK 305 (359)
T ss_pred CHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCccc
Confidence 65443332221 111110 0 0113567899999999999999
Q ss_pred CCCChhcHHHHHcCCCcCC
Q 001865 942 RLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~ 960 (1002)
||| +.|+|+||||..
T Consensus 306 R~t----~~e~l~hp~~~~ 320 (359)
T cd07876 306 RIS----VDEALRHPYITV 320 (359)
T ss_pred CCC----HHHHhcCchhhh
Confidence 999 999999999985
No 112
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.2e-39 Score=367.19 Aligned_cols=255 Identities=25% Similarity=0.461 Sum_probs=211.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 579999999999999999999999999999999987642 2334456778899999999999999999987543
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+ +++|.+++.. .++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 102 QDVYIVMELM-DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred CeEEEEEeCC-CCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 4679999999 5577777753 3889999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 177 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 177 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCC----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 211 0112356899999999999999999999999999999999999999988
Q ss_pred ChHHHHHHHHhCCC----------------------C--------------CCC----CCCCCHHHHHHHHHccccCcCC
Q 001865 902 TRQKTFANILHKDL----------------------K--------------FPS----STPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~----------------------~--------------~~~----~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+....+..++.... . ++. ....+..+.+||.+||+.||.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~ 308 (364)
T cd07875 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308 (364)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCccc
Confidence 77666655543100 0 000 0112456889999999999999
Q ss_pred CCCChhcHHHHHcCCCcCC
Q 001865 942 RLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~ 960 (1002)
||| +.++|+||||..
T Consensus 309 R~t----~~e~L~hp~~~~ 323 (364)
T cd07875 309 RIS----VDEALQHPYINV 323 (364)
T ss_pred CCC----HHHHhcCccccc
Confidence 999 999999999985
No 113
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.9e-38 Score=353.49 Aligned_cols=302 Identities=38% Similarity=0.676 Sum_probs=242.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..+++.|++|.+.+...........+.+|+++++.++||||+++++.+..++++|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 37999999999999999999999999999999987654434445567889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++|++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.+|.++|+|||++..........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999985421110000
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.... . ..............|+..|+|||.+.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus 159 ~~~~---------~---~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 159 LYEG---------H---IEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred cccc---------c---cccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 0000 0 000000011123568899999999988889999999999999999999999999988888777
Q ss_pred HHHhCCCCCCCCC-CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCcccccc
Q 001865 909 NILHKDLKFPSST-PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 987 (1002)
Q Consensus 909 ~i~~~~~~~~~~~-~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 987 (1002)
.+.......+... ..+..+.+||.+||..+|++||++. .+.++|+||||...+|+....... -.+|.+..--..+|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~-~~~~ll~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 303 (305)
T cd05609 227 QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG-GAFEVKQHRFFLGLDWNGLLRQKA--EFIPQLESEDDTSY 303 (305)
T ss_pred HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCcc-CHHHHHhCccccCCCHHHHhhcCC--CCCCCCCCcccccc
Confidence 7776655544432 4688899999999999999999853 378999999999999998754332 34566643333433
No 114
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-40 Score=338.14 Aligned_cols=290 Identities=36% Similarity=0.694 Sum_probs=251.2
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEee
Q 001865 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 740 (1002)
..+.+.+++|.+++.||+|+|+.|.++++++|.+.||+|++++..+.+.+++.=+..|..+..+- +||++|-++.+|+.
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 34567789999999999999999999999999999999999999888888888888888887766 79999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+..+++|.||++||+|--.++++ ..+++++++.+...|..||.|||++|||.||||.+|+|++..|++||+|+|+++.
T Consensus 323 esrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhc
Confidence 99999999999999999888876 4599999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC-
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR- 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~- 899 (1002)
.- .+....+++||||+|+|||.+.+..|+..+|.|+||+++++|+.|+.||.
T Consensus 401 ~l---------------------------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 401 GL---------------------------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CC---------------------------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 21 12234568999999999999999999999999999999999999999994
Q ss_pred -------CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh--cHHHHHcCCCcCCCChhhhhccC
Q 001865 900 -------GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 900 -------~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~--~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
..+....++-|+...+..|.. .|-.+..+|+..|.+||.+|+.... ...++..|+||+.++|..++-++
T Consensus 454 vgm~n~d~ntedylfqvilekqiriprs--lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~ 531 (593)
T KOG0695|consen 454 VGMDNPDMNTEDYLFQVILEKQIRIPRS--LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQ 531 (593)
T ss_pred ecCCCcccchhHHHHHHHhhhcccccce--eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcc
Confidence 123344556677777777765 4556778999999999999998763 57899999999999999998776
Q ss_pred CCCCCCCCCCCc
Q 001865 971 PPELDAPLFATD 982 (1002)
Q Consensus 971 ~~~~~~p~~~~~ 982 (1002)
.-....|....|
T Consensus 532 v~ppf~p~i~~d 543 (593)
T KOG0695|consen 532 VLPPFQPQITDD 543 (593)
T ss_pred cCCCCCCccccc
Confidence 555555654433
No 115
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-40 Score=363.35 Aligned_cols=254 Identities=26% Similarity=0.377 Sum_probs=232.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|.-++.||.|+||.||-|++..+...||||.+........+....+..|+..|+++.|||++.+.++|-.+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 47888999999999999999999999999999987766677888999999999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|| -|+-.+++.-. .+++-+-.+..|+.+.+.||+|||+.+.||||||..|||++..|.|||+|||.|....
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------- 177 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------- 177 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-------
Confidence 99 77888888754 4679999999999999999999999999999999999999999999999999985532
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
..++++|||+|||||++. .+.|+-++||||||++..+|...++|+...+....
T Consensus 178 ------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA 233 (948)
T KOG0577|consen 178 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 233 (948)
T ss_pred ------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH
Confidence 356789999999999984 46788999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.-|.+...+.......|..+.+|+.+||++-|.+||| .+++|.|+|+..
T Consensus 234 LYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRpt----se~ll~H~fv~R 283 (948)
T KOG0577|consen 234 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPT----SEELLKHRFVLR 283 (948)
T ss_pred HHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCc----HHHHhhcchhcc
Confidence 98898887766666678999999999999999999999 999999999875
No 116
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-38 Score=365.02 Aligned_cols=256 Identities=25% Similarity=0.466 Sum_probs=209.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 579999999999999999999999999999999987642 2334456778899999999999999999988643
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+ +++|.+.+.. .++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 95 ~~~~lv~e~~-~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 95 QDVYLVMELM-DANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred ceeEEEhhhh-cccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 3579999999 4567777653 3889999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 170 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 170 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred CCc----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 211 0112357899999999999999999999999999999999999999887
Q ss_pred ChHHHHHHHHhC----------------------CCC-----CC-------------CCCCCCHHHHHHHHHccccCcCC
Q 001865 902 TRQKTFANILHK----------------------DLK-----FP-------------SSTPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~~----------------------~~~-----~~-------------~~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+....+..+... ... ++ .....+..+.+||.+||..||++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 301 (355)
T cd07874 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301 (355)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchh
Confidence 655444333221 000 00 00112456789999999999999
Q ss_pred CCCChhcHHHHHcCCCcCCC
Q 001865 942 RLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
||| +.|+|+||||...
T Consensus 302 Rps----~~ell~hp~~~~~ 317 (355)
T cd07874 302 RIS----VDEALQHPYINVW 317 (355)
T ss_pred cCC----HHHHhcCcchhcc
Confidence 999 9999999999854
No 117
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.2e-38 Score=357.42 Aligned_cols=259 Identities=23% Similarity=0.410 Sum_probs=213.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|.+++.||+|+||.||++.+..+++.+|+|.++.... ......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 4689999999999999999999999999999999875422 22234567899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||++ ++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 83 FEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred EeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 99995 5888887654 3458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 159 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 213 (309)
T cd07872 159 -------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE 213 (309)
T ss_pred -------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 11123467899999999865 4578899999999999999999999988776655
Q ss_pred HHHHHhCC-------------------CCCC---------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKD-------------------LKFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~-------------------~~~~---------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+.... ..++ ....++.++.+||.+||+.||.+||| +.++|+||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~ 289 (309)
T cd07872 214 LHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRIS----AEEAMKHAYF 289 (309)
T ss_pred HHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCC----HHHHhcChhh
Confidence 54443210 1111 11235778999999999999999999 9999999999
Q ss_pred CCC
Q 001865 959 KGV 961 (1002)
Q Consensus 959 ~~~ 961 (1002)
+.+
T Consensus 290 ~~~ 292 (309)
T cd07872 290 RSL 292 (309)
T ss_pred hhc
Confidence 975
No 118
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-38 Score=353.54 Aligned_cols=255 Identities=28% Similarity=0.461 Sum_probs=207.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCcceeEEEEee-----C
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQT-----K 741 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~-----~ 741 (1002)
+|++++.||+|+||.||+|.+..+++.||+|.++..... ........+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 589999999999999999999999999999998754221 12223445677766655 79999999998864 3
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 56899999995 68988887655556899999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 159 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 159 SCQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cCc----------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 211 0112346899999999999888999999999999999999999999887
Q ss_pred ChHHHHHHHHhCC-----CCCC--------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001865 902 TRQKTFANILHKD-----LKFP--------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 902 ~~~~~~~~i~~~~-----~~~~--------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
.....+..+.... ..++ .....+..+.+||.+||++||.+||| +.+++.||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~~~l~hp 286 (288)
T cd07863 211 SEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS----AFRALQHP 286 (288)
T ss_pred CHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC----HHHHhcCC
Confidence 7766555554310 0000 01235667899999999999999999 99999999
Q ss_pred Cc
Q 001865 957 FF 958 (1002)
Q Consensus 957 ~f 958 (1002)
||
T Consensus 287 ~f 288 (288)
T cd07863 287 FF 288 (288)
T ss_pred CC
Confidence 98
No 119
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.5e-38 Score=377.63 Aligned_cols=269 Identities=28% Similarity=0.408 Sum_probs=227.0
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC---
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--- 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--- 742 (1002)
...++|++.+.||+|+||+||+|.+..+++.||||++..... .......+.+|+.++..++|+||++++..+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345799999999999999999999999999999999976533 3445567888999999999999999988775432
Q ss_pred -----eEEEEEeccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEec
Q 001865 743 -----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 743 -----~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
.+++||||+++|+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 478999999999999998643 2346899999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001865 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
|+++.+..... .......+||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus 188 Gls~~~~~~~~-------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~ 242 (496)
T PTZ00283 188 GFSKMYAATVS-------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242 (496)
T ss_pred ccCeecccccc-------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99865431100 01123467999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001865 896 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
.||.+.+..+.+..+..+... +....++..+.+|+.+||..||.+||+ +.++++|||++...-..
T Consensus 243 ~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs----~~ell~~p~~~~~~~~~ 307 (496)
T PTZ00283 243 RPFDGENMEEVMHKTLAGRYD-PLPPSISPEMQEIVTALLSSDPKRRPS----SSKLLNMPICKLFISGL 307 (496)
T ss_pred CCCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccChhhCcC----HHHHHhCHHHHHhhhhH
Confidence 999998888877777765443 233457889999999999999999999 99999999998754333
No 120
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=335.62 Aligned_cols=265 Identities=30% Similarity=0.483 Sum_probs=223.1
Q ss_pred cccc-ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEE
Q 001865 671 FRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 671 y~i~-~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
|++. ..||+|+|+.|-.|....+|..||||++.+. ......++.+|++++.+. +|+||++++++|+++..+|+||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 4443 4689999999999999999999999999875 445667889999999988 7999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC---cEEEEeccCCcccCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g---~vkL~DFG~a~~~~~~~ 825 (1002)
|.|.||+|...+.++ +.+++..+..+.++|+.||.|||.+||.||||||+|||..+.. -+|||||.+..-+.-..
T Consensus 156 EKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred ecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 999999999999875 5599999999999999999999999999999999999998655 48999999974321110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
. .. ......-.+.+|+..|||||+.. ...|+.++|.||||+|||.|++|.+||.|
T Consensus 234 ~-------------------~s-pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 234 D-------------------CS-PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred C-------------------CC-CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 0 00 01111234678999999999862 34688999999999999999999999976
Q ss_pred C---------------ChHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001865 901 K---------------TRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 901 ~---------------~~~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
. .....+..|..+...+|+ +..+|.++++|+..+|..++.+|.+ +.++++|||+..+..
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rls----a~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLS----AAQVLNHPWVQRCAP 369 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhh----hhhccCCccccccch
Confidence 4 234677788888888885 4557899999999999999999999 999999999998755
Q ss_pred h
Q 001865 964 A 964 (1002)
Q Consensus 964 ~ 964 (1002)
+
T Consensus 370 e 370 (463)
T KOG0607|consen 370 E 370 (463)
T ss_pred h
Confidence 4
No 121
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.9e-38 Score=375.95 Aligned_cols=254 Identities=23% Similarity=0.380 Sum_probs=203.6
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC------CCcceeEEEEee
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQT 740 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~~ 740 (1002)
..++|++++.||+|+||+||+|.+..+++.||||+++.. .........|+.+++.+.| .+++.++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 457899999999999999999999999999999998642 1223345567777776644 458889998875
Q ss_pred C-CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCC----------
Q 001865 741 K-THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG---------- 808 (1002)
Q Consensus 741 ~-~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g---------- 808 (1002)
+ +++|+||+++ |++|.+++.+. ..+++..++.|+.||+.||.|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 4 5789999999 88999888764 459999999999999999999998 5999999999999998765
Q ss_pred ------cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001865 809 ------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 809 ------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIw 882 (1002)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 329 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMW 329 (467)
T ss_pred cCCCCceEEECCCCccccCc------------------------------cccccccCCccccCcHHhhcCCCCcHHHHH
Confidence 49999999874311 112346799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC------------------------C----------------CCC
Q 001865 883 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP------------------------S----------------STP 922 (1002)
Q Consensus 883 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~----------------~~~ 922 (1002)
||||++|+|++|++||.+.+..+.+..+......+| . ...
T Consensus 330 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (467)
T PTZ00284 330 SMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVI 409 (467)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhh
Confidence 999999999999999988776554443322110000 0 001
Q ss_pred CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 923 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 923 ~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+..+.+||.+||++||.+||| ++|+|+||||...
T Consensus 410 ~~~~~~dli~~mL~~dP~~R~t----a~e~L~Hp~~~~~ 444 (467)
T PTZ00284 410 RDDLLCDLIYGLLHYDRQKRLN----ARQMTTHPYVLKY 444 (467)
T ss_pred chHHHHHHHHHhCCcChhhCCC----HHHHhcCcccccc
Confidence 1345779999999999999999 9999999999873
No 122
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-38 Score=375.45 Aligned_cols=261 Identities=25% Similarity=0.394 Sum_probs=223.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCC-CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
...|.+.+.||+|+||.||+|....+ +..+|+|.+... .......+.+|+.+|+.++||||+++++++..++..|+
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 34599999999999999999999877 788999976533 34445567789999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 747 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||++||+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999999887542 2346899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus 223 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~ 277 (478)
T PTZ00267 223 VS-------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR 277 (478)
T ss_pred cc-------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 00 01223567999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+..+..+... +....++..+.+||.+||..||++||+ +.+++.|||++.+
T Consensus 278 ~~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps----~~~~l~~~~~~~~ 329 (478)
T PTZ00267 278 EIMQQVLYGKYD-PFPCPVSSGMKALLDPLLSKNPALRPT----TQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHHhCCCC-CCCccCCHHHHHHHHHHhccChhhCcC----HHHHHhCHHHHHH
Confidence 888877766543 223457889999999999999999999 9999999999754
No 123
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6e-38 Score=342.45 Aligned_cols=260 Identities=26% Similarity=0.381 Sum_probs=220.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC--hHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+.|.+.+.||+|++|.||+|.+..+++.||+|.+....... ......+.+|++++++++||||+++++++..++.+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46899999999999999999999999999999987543221 2234578889999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+++++|.+++... ..+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999998764 4589999999999999999999999999999999999999999999999999854321100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.........|+..|+|||++.+..++.++||||||+++|+|++|+.||...+....
T Consensus 160 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 215 (263)
T cd06625 160 ------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA 215 (263)
T ss_pred ------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH
Confidence 00011234688999999999998899999999999999999999999988777666
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+.............+..+.+||.+||..+|.+||+ +.++++||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 263 (263)
T cd06625 216 IFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPS----AEELLRHFFV 263 (263)
T ss_pred HHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCC----HHHHhhCCCC
Confidence 66665554444444457889999999999999999999 9999999998
No 124
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.5e-38 Score=347.71 Aligned_cols=264 Identities=34% Similarity=0.601 Sum_probs=219.1
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCch
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|+||+||+|.+..+|+.||+|++.+...........+..|+++++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999999765443334455667899999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001865 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++.......+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~------------ 148 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG------------ 148 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC------------
Confidence 99997755456999999999999999999999999999999999999999999999999988543210
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCC-
Q 001865 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL- 915 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~- 915 (1002)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.....
T Consensus 149 ----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05577 149 ----------------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE 212 (277)
T ss_pred ----------------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc
Confidence 011233578899999999888889999999999999999999999977544222222222111
Q ss_pred -CCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhc
Q 001865 916 -KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 916 -~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
........+..+.+||.+||+.||.+||++.+ .+.++++||||+.++|..+..
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~ 267 (277)
T cd05577 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEA 267 (277)
T ss_pred ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhc
Confidence 12222346889999999999999999997766 699999999999999988843
No 125
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-38 Score=362.92 Aligned_cols=255 Identities=27% Similarity=0.431 Sum_probs=210.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||.|+||.||+|.+..+++.||+|.+.+.. ........+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 468999999999999999999999999999999987542 2233445677899999999999999999987533
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...|++|+++ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 4579999999 8899888764 34999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CC------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 21 1123478999999999877 5678899999999999999999999988
Q ss_pred CChHHHHHHHHhCCC-----------------------CCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 901 KTRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~-----------------------~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+..... ..+. ....++.+.+||.+||..||.+||| +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s----~~e 294 (343)
T cd07878 219 NDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRIS----ASE 294 (343)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCC----HHH
Confidence 766555544432100 0000 0124566889999999999999999 999
Q ss_pred HHcCCCcCCC
Q 001865 952 IKKHPFFKGV 961 (1002)
Q Consensus 952 lL~Hp~f~~~ 961 (1002)
+|+||||...
T Consensus 295 ll~hp~~~~~ 304 (343)
T cd07878 295 ALAHPYFSQY 304 (343)
T ss_pred HhcCcchhcc
Confidence 9999999874
No 126
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.1e-38 Score=359.99 Aligned_cols=257 Identities=24% Similarity=0.347 Sum_probs=205.2
Q ss_pred cccccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEE
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (1002)
+++..++|++.+.||+|+||.||+|.+. .+++.||+|+++... .......+.+|+.++..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 3566789999999999999999999852 345689999987542 233456788999999999 89999999998
Q ss_pred Eee-CCeEEEEEeccCCCchhHHHhhCC----------------------------------------------------
Q 001865 738 FQT-KTHVCLITDYCPGGELFLLLDRQP---------------------------------------------------- 764 (1002)
Q Consensus 738 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------- 764 (1002)
+.. ++.+|+||||+++|+|.+++....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 775 456899999999999999987531
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001865 765 --------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 765 --------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~---------- 229 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD---------- 229 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc----------
Confidence 12478889999999999999999999999999999999999999999999999865321110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCC
Q 001865 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (1002)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+....
T Consensus 230 ---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~ 294 (338)
T cd05102 230 ---------------YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT 294 (338)
T ss_pred ---------------hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC
Confidence 001123356788999999999889999999999999999996 9999988654444444443333
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 916 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 916 ~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
........+..+.+|+.+||..||.+|||+.+
T Consensus 295 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~e 326 (338)
T cd05102 295 RMRAPENATPEIYRIMLACWQGDPKERPTFSA 326 (338)
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 33333456888999999999999999999443
No 127
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=334.39 Aligned_cols=253 Identities=27% Similarity=0.436 Sum_probs=214.0
Q ss_pred cCCcccc-ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHH-hCCCCCcceeEEEEee----C
Q 001865 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD-MLDHPFVPALYASFQT----K 741 (1002)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~-~l~hpnIv~l~~~~~~----~ 741 (1002)
.++|.+- ++||-|-.|.|-.|.++.|+.++|+|++.-. ....+|+++-- .-.|||||.++++|++ .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 3566654 4699999999999999999999999987532 34456776643 3479999999999864 3
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec---CCcEEEEeccCC
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~---~g~vkL~DFG~a 818 (1002)
..+.+|||.|+||.|++.++.+....+++.++..|++||..||.|||+.+|.||||||+|+|++. |..+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 56789999999999999999988888999999999999999999999999999999999999975 457999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
+.... ...-.+.|-||.|.|||++-...|+..+|+||+||++|-|++|.+||
T Consensus 212 K~t~~----------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 212 KETQE----------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred cccCC----------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 65321 11224568899999999999999999999999999999999999999
Q ss_pred CCCCh----HHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 899 RGKTR----QKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 899 ~~~~~----~~~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.... ..+..+|..+...|| .+...|..++++|+++|..+|.+|+| +.+++.|||+.+
T Consensus 264 YS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT----I~~~m~hpwi~~ 327 (400)
T KOG0604|consen 264 YSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT----IEEVMDHPWINQ 327 (400)
T ss_pred cccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhee----HHHhhcCchhcc
Confidence 86543 344456666666665 45668999999999999999999999 999999999997
No 128
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=6e-39 Score=325.48 Aligned_cols=260 Identities=27% Similarity=0.440 Sum_probs=222.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
.+.++.+.+..||+|+.|+|++++.+.+|...|||.+.+. .+.+..+++...+.++.+- ++|+||+++++|..+..+
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 3456778889999999999999999999999999999875 3566777888888877665 599999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
++.||.| +.++..++++. .+++++..+-.+..-++.||.||..+ ||||||+||+|||++..|++||||||.+..+..
T Consensus 167 ~IcMelM-s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 167 FICMELM-STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHHHHHH-HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec
Confidence 9999999 77777777654 45699999999999999999999865 899999999999999999999999999865432
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
+ ...+...|.+.|||||.+. ...|+.++||||||++++||.||..||.+
T Consensus 245 S----------------------------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 245 S----------------------------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred c----------------------------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence 2 2334457999999999985 34688899999999999999999999988
Q ss_pred -CChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 901 -KTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 901 -~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.++.+++.+++....+ ++.....|+.+.+|+..||++|+.+||. +.+||+|||+...
T Consensus 297 c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~----Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 297 CKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK----YNKLLEHPFIKRY 355 (391)
T ss_pred CCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc----hHHHhcCcceeec
Confidence 4667888888875443 4444558999999999999999999999 9999999999864
No 129
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.1e-37 Score=346.36 Aligned_cols=264 Identities=26% Similarity=0.447 Sum_probs=222.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++++.||.|+||.||++.+..+++.+++|++... .......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 46799999999999999999999999999999998754 345567788899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|..++.... ..+++..++.++.||+.+|.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 88 IEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred EecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999999988875432 45899999999999999999999999999999999999999999999999987432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
........+++.|+|||++. ...++.++|||||||++|+|++|..||...+
T Consensus 164 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 219 (292)
T cd06644 164 ------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 219 (292)
T ss_pred ------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc
Confidence 01122346889999999985 3446779999999999999999999998877
Q ss_pred hHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001865 903 RQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 903 ~~~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
....+..+..... ........+..+.+||.+||..+|++||+ ++++++||||..++++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~~~ 280 (292)
T cd06644 220 PMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPS----AAQLLEHPFVSSVTSNRP 280 (292)
T ss_pred HHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccccccchh
Confidence 6666655554332 22233446788999999999999999999 999999999999888764
No 130
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=8.6e-38 Score=341.32 Aligned_cols=258 Identities=41% Similarity=0.749 Sum_probs=221.3
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCch
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||.|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++..++.+|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999988999999999876544455567889999999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001865 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++.+. ..++...+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------- 147 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------- 147 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------
Confidence 9999764 348999999999999999999999999999999999999999999999999985532110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHHHhCC
Q 001865 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQKTFANILHKD 914 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~--~~~~~~~i~~~~ 914 (1002)
......|++.|++||.+.+..++.++|+||||+++|+|++|..||.... ....+..+..+.
T Consensus 148 -----------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 210 (262)
T cd05572 148 -----------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN 210 (262)
T ss_pred -----------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC
Confidence 1123468899999999988888999999999999999999999998776 666666666433
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCC-hhcHHHHHcCCCcCCCChh
Q 001865 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~ 964 (1002)
.........+..+.+||.+||..+|++||++ ...++|+++||||++.+|+
T Consensus 211 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 211 GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 3333333347889999999999999999984 3458999999999999886
No 131
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=7e-38 Score=354.09 Aligned_cols=265 Identities=21% Similarity=0.352 Sum_probs=210.2
Q ss_pred cccccccc--CcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 673 PIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 673 i~~~LG~G--~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
+++.||+| +|++||++.++.+|+.||+|.+..... .......+.+|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 789999999999999999999875432 233445677899999999999999999999999999999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+..........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~-- 158 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL-- 158 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc--
Confidence 999999999976544568999999999999999999999999999999999999999999999998653321100000
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||..........
T Consensus 159 ------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 220 (327)
T cd08227 159 ------------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 220 (327)
T ss_pred ------------------cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH
Confidence 000001122357788999999976 458899999999999999999999998765544433
Q ss_pred HHHhCCCCC--------------------------------------------CCCCCCCHHHHHHHHHccccCcCCCCC
Q 001865 909 NILHKDLKF--------------------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 909 ~i~~~~~~~--------------------------------------------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
.......+. +.....++.+.+||.+||++||++|||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 300 (327)
T cd08227 221 EKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPS 300 (327)
T ss_pred HHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCC
Confidence 333221110 001123567899999999999999999
Q ss_pred ChhcHHHHHcCCCcCCCC
Q 001865 945 SHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 945 ~~~~a~elL~Hp~f~~~~ 962 (1002)
++++++||||+.+.
T Consensus 301 ----~~ell~~p~f~~~~ 314 (327)
T cd08227 301 ----ASTLLNHSFFKQIK 314 (327)
T ss_pred ----HHHHhcChhhhhcc
Confidence 99999999998753
No 132
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=9.8e-38 Score=348.51 Aligned_cols=260 Identities=25% Similarity=0.412 Sum_probs=214.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||.|+||.||++.+..+++.||+|.++.... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 5689999999999999999999999999999999875422 22234567899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred Eeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 99995 6898888654 3458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.
T Consensus 159 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~ 213 (301)
T cd07873 159 -------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ 213 (301)
T ss_pred -------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111234578999999998654 477899999999999999999999998776655
Q ss_pred HHHHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+.... ..++. ....+..+.+||.+||+.||.+||| +.++|+||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~eil~h~~f 289 (301)
T cd07873 214 LHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRIS----AEEAMKHPYF 289 (301)
T ss_pred HHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcC----HHHHhcCccc
Confidence 54443210 01111 1235778899999999999999999 9999999999
Q ss_pred CCCC
Q 001865 959 KGVN 962 (1002)
Q Consensus 959 ~~~~ 962 (1002)
+.+.
T Consensus 290 ~~~~ 293 (301)
T cd07873 290 HCLG 293 (301)
T ss_pred cccc
Confidence 9865
No 133
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2e-37 Score=337.05 Aligned_cols=256 Identities=25% Similarity=0.445 Sum_probs=218.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee-CCeEEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lV~ 748 (1002)
+|++++.||.|++|.||++.+..+++.||+|.+..... .......+.+|+++++.++|+|++++++.+.. .+.+|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 58999999999999999999999999999999875422 33445667889999999999999999998864 45789999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.......+++.+++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--- 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--- 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC---
Confidence 99999999999987555668999999999999999999999999999999999999999999999999985542110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+......
T Consensus 157 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~ 212 (257)
T cd08223 157 ------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY 212 (257)
T ss_pred ------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 11224568999999999999889999999999999999999999998877766666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+..+.... .....+..+.+|+.+||+.+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 257 (257)
T cd08223 213 RIIEGKLPP-MPKDYSPELGELIATMLSKRPEKRPS----VKSILRQPYI 257 (257)
T ss_pred HHHhcCCCC-CccccCHHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence 665554322 22346789999999999999999999 9999999997
No 134
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2e-37 Score=336.67 Aligned_cols=256 Identities=28% Similarity=0.445 Sum_probs=222.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|.+.+.||+|++|.||+|.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 47888999999999999999999999999999875432 34456678899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---- 155 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---- 155 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc----
Confidence 9999999999987655679999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 212 (256)
T cd08529 156 -----------------------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK 212 (256)
T ss_pred -----------------------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 111234688999999999988889999999999999999999999998887777777
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+...... ...+..+.++|.+||+.+|++||+ +.++++|||+
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 256 (256)
T cd08529 213 IIRGVFPPVS-QMYSQQLAQLIDQCLTKDYRQRPD----TFQLLRNPSL 256 (256)
T ss_pred HHcCCCCCCc-cccCHHHHHHHHHHccCCcccCcC----HHHHhhCCCC
Confidence 7665433222 256788999999999999999999 9999999996
No 135
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.6e-37 Score=341.03 Aligned_cols=256 Identities=27% Similarity=0.406 Sum_probs=213.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEee------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT------ 740 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~------ 740 (1002)
.+.|++.+.||.|+||.||++.+..+++.+|+|++.... .....+.+|+.+++.+ +|+||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 357999999999999999999999999999999987532 2235677899999988 79999999999875
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
...+|+||||+.+++|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++..
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 34689999999999999999875556789999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
.... ........|++.|+|||++. ...++.++|||||||++|+|++|.
T Consensus 161 ~~~~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~ 213 (272)
T cd06637 161 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 213 (272)
T ss_pred cccc---------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 3211 01123457899999999986 345778999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 896 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.||...........+............++..+.+||.+||..+|.+||| +.++++||||
T Consensus 214 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~~ 272 (272)
T cd06637 214 PPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPT----TEQLMKHPFI 272 (272)
T ss_pred CCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCC----HHHHhhCCCC
Confidence 9998766555554444433333333456789999999999999999999 9999999998
No 136
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.7e-38 Score=362.50 Aligned_cols=262 Identities=25% Similarity=0.408 Sum_probs=212.4
Q ss_pred ccCCccccccccccCcEEEEEEEEc--CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
...+|.+++.||.|+||.||+|... .+++.+|+|.+... ....+|+.+|+.++||||+++++++...+.+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 3468999999999999999999764 34678999988643 2345799999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||++ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 162 ~lv~e~~-~~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 162 CMVMPKY-KCDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred EEEehhc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9999999 6788888854 356999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~- 903 (1002)
.. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...
T Consensus 239 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~ 293 (392)
T PHA03207 239 PD-------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVK 293 (392)
T ss_pred cc-------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCC
Confidence 10 0112245799999999999999999999999999999999999999976532
Q ss_pred --HHHHHHHHhC----CCCCC-------------------------C---CCCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001865 904 --QKTFANILHK----DLKFP-------------------------S---STPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 904 --~~~~~~i~~~----~~~~~-------------------------~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
...+..+.+. ...++ . ....+..+.+||.+||+.||++||+ +
T Consensus 294 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rps----a 369 (392)
T PHA03207 294 SSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPS----A 369 (392)
T ss_pred CcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCC----H
Confidence 1222222210 00000 0 0123567889999999999999999 9
Q ss_pred HHHHcCCCcCCCChhhhhc
Q 001865 950 NEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 950 ~elL~Hp~f~~~~~~~~~~ 968 (1002)
.++|.||||+...|+.++-
T Consensus 370 ~e~l~~p~f~~~~~~~~~~ 388 (392)
T PHA03207 370 QDILSLPLFTKEPINLLNI 388 (392)
T ss_pred HHHhhCchhhccchhhhcC
Confidence 9999999999988887643
No 137
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.5e-37 Score=341.27 Aligned_cols=252 Identities=26% Similarity=0.425 Sum_probs=210.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 36889999999999999999999999999999987542 2334467889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|..+. .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 79 EFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred ecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 999999986542 3788999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-----
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----- 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~----- 903 (1002)
.....+|++.|+|||++.+..++.++|+|||||++|+|++|+.||.....
T Consensus 149 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~ 203 (279)
T cd06619 149 -------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL 203 (279)
T ss_pred -------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc
Confidence 11235789999999999998899999999999999999999999965321
Q ss_pred --HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 904 --QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 904 --~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
......+.............+..+.+|+.+||+.+|.+||+ ++++++||||...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~eil~~~~~~~~ 259 (279)
T cd06619 204 MPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPA----PENLMDHPFIVQY 259 (279)
T ss_pred chHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCC----HHHHhcCcccccc
Confidence 12222222222222122336778999999999999999999 9999999999875
No 138
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-37 Score=379.74 Aligned_cols=264 Identities=25% Similarity=0.388 Sum_probs=217.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--CCe
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTH 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~ 743 (1002)
...++|++++.||.|+||+||+|.+..++..+|+|++..... .......+..|+.+|+.|+||||++++++|.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 346799999999999999999999999999999999876533 33445678899999999999999999998854 467
Q ss_pred EEEEEeccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-------CcccCCCCCCcEEEec--------
Q 001865 744 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-------GIIYRDLKPENVLLQG-------- 806 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~-------gIiHrDLKP~NILl~~-------- 806 (1002)
+||||||+++++|.+++... ....+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 99999999999999998752 234699999999999999999999985 4999999999999964
Q ss_pred ---------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCC
Q 001865 807 ---------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGH 875 (1002)
Q Consensus 807 ---------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~--~~~ 875 (1002)
.+.+||+|||++..+... ......+||+.|+|||++.+ ..+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------s~~~s~vGTp~YmAPEvL~ge~~~~ 220 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------SMAHSCVGTPYYWSPELLLHETKSY 220 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc----------------------------ccccccCCCccccCHHHHhccCCCC
Confidence 235899999998543211 01123579999999999865 457
Q ss_pred CChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 876 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 876 ~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+.++||||||||||+|++|..||........+...+.....++. ...+..+.+||..||..+|.+||+ +.++|.|
T Consensus 221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPS----a~QlL~h 295 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI-KGKSKELNILIKNLLNLSAKERPS----ALQCLGY 295 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc-CCCCHHHHHHHHHHhcCChhHCcC----HHHHhcc
Confidence 88999999999999999999999876665555455444433332 336788999999999999999999 9999999
Q ss_pred CCcCCCCh
Q 001865 956 PFFKGVNW 963 (1002)
Q Consensus 956 p~f~~~~~ 963 (1002)
|||+.+..
T Consensus 296 ~~ik~i~~ 303 (1021)
T PTZ00266 296 QIIKNVGP 303 (1021)
T ss_pred HHHhhcCC
Confidence 99987644
No 139
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.9e-37 Score=340.90 Aligned_cols=261 Identities=36% Similarity=0.645 Sum_probs=206.6
Q ss_pred cccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHH---hCCCCCcceeEEEEeeCCeEEEEEeccC
Q 001865 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD---MLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~---~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
.||+|+||.||++.+..+++.+|+|++.+.............++..+++ ..+||||+.+++++..++..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999997654332222233344544443 3479999999999999999999999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 001865 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
+++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-------- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--------
Confidence 99999998764 45999999999999999999999999999999999999999999999999998543210
Q ss_pred hhhhhcccCCCCCcccccccccccccccCCccccccccc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--HHHHHH
Q 001865 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTFAN 909 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--~~~~~~ 909 (1002)
......|++.|+|||.+. +..++.++|||||||++|+|++|..||..... ......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~ 209 (279)
T cd05633 151 ---------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (279)
T ss_pred ---------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH
Confidence 011236899999999986 45678899999999999999999999975432 122222
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhc
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
... ..........+..+.+||.+||..||.+|++.. ..+.++++||||++++|.....
T Consensus 210 ~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~ 268 (279)
T cd05633 210 MTL-TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYL 268 (279)
T ss_pred Hhh-cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhc
Confidence 111 112222234688999999999999999999321 2289999999999999998743
No 140
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.8e-38 Score=342.99 Aligned_cols=254 Identities=38% Similarity=0.629 Sum_probs=211.1
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|++++.||+|+||+||++.+..+++.||+|++..... .........+|+.+++.++||||+++++++......|+||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI-EEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH-HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc-cccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 7899999999999999999999999999999987632 122223345699999999999999999999999999999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+++++|.+++... ..++...+..++.||+.||++||++||+|+||||+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~------- 150 (260)
T PF00069_consen 80 CPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE------- 150 (260)
T ss_dssp ETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-------
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence 9888999999843 4589999999999999999999999999999999999999999999999999854210
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCccccccccc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC---hHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQKT 906 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-~~~~~~~sDIwSlGvil~elltG~~Pf~~~~---~~~~ 906 (1002)
.........+++.|+|||++. +..++.++||||||+++|+|++|..||.... ....
T Consensus 151 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~ 210 (260)
T PF00069_consen 151 --------------------NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI 210 (260)
T ss_dssp --------------------TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH
T ss_pred --------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 111233457899999999998 7888999999999999999999999999873 3333
Q ss_pred HHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+........... .....+..+.+||.+||+.||++||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~l~~~~~~ 260 (260)
T PF00069_consen 211 IEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPS----AEELLKHPWF 260 (260)
T ss_dssp HHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTT----HHHHHTSGGG
T ss_pred hhhcccccccccccccchhHHHHHHHHHHHccCChhHCcC----HHHHhcCCCC
Confidence 333333221111 11112378999999999999999999 9999999998
No 141
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.9e-37 Score=342.76 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=209.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||+|++|.||+|.+..++..||+|.++.... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58899999999999999999999999999999875422 22334567889999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 750 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+. ++|.+++.... ...+++..++.++.||+.||+|||++||+|+||||+||+++.+|.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 154 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP---- 154 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC----
Confidence 995 68888886533 256899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
........+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+.....
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~ 211 (285)
T cd07861 155 -----------------------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL 211 (285)
T ss_pred -----------------------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 0112234678999999998654 4688999999999999999999999887654444
Q ss_pred HHHHhCCC------------------CC---------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHKDL------------------KF---------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~------------------~~---------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+..... .+ ......+.++.+||.+||..||.+||| +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~~ll~~~~~ 285 (285)
T cd07861 212 FRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS----AKKALNHPYF 285 (285)
T ss_pred HHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC----HHHHhcCCCC
Confidence 33321100 00 011236788899999999999999999 9999999998
No 142
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.2e-37 Score=337.62 Aligned_cols=256 Identities=43% Similarity=0.758 Sum_probs=215.9
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHH-HhCCCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||.|+||.||+|.+..+++.||+|++++...........+..|..++ ...+|+|++++++++...+.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999999999999999998765332333334445555544 445899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 9999999764 4589999999999999999999999999999999999999999999999998743210
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+....+..+...
T Consensus 150 ---------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 208 (260)
T cd05611 150 ---------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208 (260)
T ss_pred ---------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 12346888999999998888889999999999999999999999988888777777666
Q ss_pred CCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001865 914 DLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 914 ~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
...++.. ..++..+.+++.+||..+|++||++.. ++|++.||||+.++|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~-~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 209 RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANG-YQEIKSHPFFKSINWD 260 (260)
T ss_pred ccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCc-HHHHHcChHhhcCCCC
Confidence 5544432 246889999999999999999997322 6899999999999984
No 143
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.7e-37 Score=338.56 Aligned_cols=265 Identities=45% Similarity=0.827 Sum_probs=225.8
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCch
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||.|+||.||++.+..+++.+++|++.............+.+|++++++++||||+++++.+..++..|+||||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999989999999999765444445667888999999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001865 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------- 151 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL------- 151 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-------
Confidence 99997643 589999999999999999999999999999999999999999999999999854322111000
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001865 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (1002)
...........++..|+|||.+....++.++|+||||+++|+|++|..||...........+..+...
T Consensus 152 ------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 152 ------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred ------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 00011223456888999999998888889999999999999999999999988888888888776666
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001865 917 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 917 ~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
++.....+..+.+|+.+||+.+|.+|||+.. +.++|+||||+.++|
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~-~~~~l~~~~~~~~~~ 265 (265)
T cd05579 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAKS-IEEIKNHPFFKGIDW 265 (265)
T ss_pred CCccccCCHHHHHHHHHHhcCCHhhcCCCcc-HHHHhcCccccCCCC
Confidence 6665556889999999999999999999322 389999999999988
No 144
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.2e-37 Score=341.67 Aligned_cols=260 Identities=27% Similarity=0.458 Sum_probs=221.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||.|+||.||++.+..++..+|+|+++.. .......+.+|+++++.++||||+++++++..++..|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 35799999999999999999999889999999998643 445567788999999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~--- 156 (280)
T cd06611 81 IEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST--- 156 (280)
T ss_pred eeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc---
Confidence 9999999999998764 245999999999999999999999999999999999999999999999999987542211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
........|++.|+|||++. ...++.++|||||||++|+|++|+.||...+
T Consensus 157 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~ 212 (280)
T cd06611 157 ------------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN 212 (280)
T ss_pred ------------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC
Confidence 01122356899999999985 3446779999999999999999999998887
Q ss_pred hHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 903 RQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
....+..+.....+ +......+..+.+||.+||+.+|.+||+ +.++++||||+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~~ 269 (280)
T cd06611 213 PMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPT----AAELLKHPFVSDQS 269 (280)
T ss_pred HHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcC----HHHHhcChhhcccc
Confidence 77766666654332 2233446788999999999999999999 99999999999853
No 145
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-37 Score=362.82 Aligned_cols=254 Identities=26% Similarity=0.362 Sum_probs=205.4
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
...+|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+.+|++++|+||+++++++..++..|+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 35689999999999999999999999999999996432 235689999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
|||++ .++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 238 v~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 238 VLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99999 678988886542 3599999999999999999999999999999999999999999999999999865421100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC----
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---- 902 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~---- 902 (1002)
........||+.|+|||++.+..++.++|||||||++|+|++|..|+....
T Consensus 316 -------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~ 370 (461)
T PHA03211 316 -------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE 370 (461)
T ss_pred -------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc
Confidence 011124579999999999999999999999999999999999876653321
Q ss_pred ----hHHHHHHHHhCCCC---C-----------------------------CCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001865 903 ----RQKTFANILHKDLK---F-----------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 903 ----~~~~~~~i~~~~~~---~-----------------------------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
.......+...... + ......+..+.+||.+||+.||.+|||
T Consensus 371 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPs-- 448 (461)
T PHA03211 371 RRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPS-- 448 (461)
T ss_pred cCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcC--
Confidence 12222222211110 1 111123457889999999999999999
Q ss_pred hcHHHHHcCCCcCC
Q 001865 947 EGANEIKKHPFFKG 960 (1002)
Q Consensus 947 ~~a~elL~Hp~f~~ 960 (1002)
+.|+|+||||+.
T Consensus 449 --a~elL~hp~f~~ 460 (461)
T PHA03211 449 --AAELLRLPLFQS 460 (461)
T ss_pred --HHHHhhCcccCC
Confidence 999999999975
No 146
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.4e-37 Score=339.03 Aligned_cols=257 Identities=30% Similarity=0.471 Sum_probs=221.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++|+||+++++++..+..+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47999999999999999999999999999999987542 2344567789999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... .+++..++.++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--- 152 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc---
Confidence 999999999998764 58999999999999999999999999999999999999999999999999986543210
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus 153 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~ 208 (274)
T cd06609 153 ------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF 208 (274)
T ss_pred ------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 11223468899999999998889999999999999999999999998877666655
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+.....+.......+..+.++|.+||..+|++||+ ++++++||||+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt----~~~il~~~~~~~~ 257 (274)
T cd06609 209 LIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPS----AKELLKHKFIKKA 257 (274)
T ss_pred HhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcC----HHHHhhChhhcCC
Confidence 555443332222226788999999999999999999 9999999999974
No 147
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-37 Score=356.58 Aligned_cols=252 Identities=25% Similarity=0.398 Sum_probs=201.5
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
...+|++++.||+|+||.||+|.+..+++.||+|+..+. ....|+.++++++||||+++++++...+..|+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 345899999999999999999999999999999986543 23468999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
|||++ .++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 135 VLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred EEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99999 67888888654 346899999999999999999999999999999999999999999999999998532110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC-CCCCh--
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF-RGKTR-- 903 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf-~~~~~-- 903 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|+++..|+ .....
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~ 264 (357)
T PHA03209 211 --------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTP 264 (357)
T ss_pred --------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcH
Confidence 0112356999999999999999999999999999999999754444 32111
Q ss_pred -------HHHHHHHHhC----CCCCC----------------------------CCCCCCHHHHHHHHHccccCcCCCCC
Q 001865 904 -------QKTFANILHK----DLKFP----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 904 -------~~~~~~i~~~----~~~~~----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
...+..+... ...++ .....+..+.+||.+||+.||.+|||
T Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpt 344 (357)
T PHA03209 265 EEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPS 344 (357)
T ss_pred HHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcC
Confidence 0111111110 00011 01123456678999999999999999
Q ss_pred ChhcHHHHHcCCCcCCC
Q 001865 945 SHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 945 ~~~~a~elL~Hp~f~~~ 961 (1002)
+.|+|+||||+.+
T Consensus 345 ----a~e~l~hp~f~~~ 357 (357)
T PHA03209 345 ----AEEILNYPMFAQL 357 (357)
T ss_pred ----HHHHhcCchhccC
Confidence 9999999999863
No 148
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-37 Score=341.70 Aligned_cols=246 Identities=18% Similarity=0.200 Sum_probs=208.1
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee----CCeEEEEEec
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDY 750 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~lV~E~ 750 (1002)
..||+|+++.||++.. +|+.||+|.+++...........+.+|+.+|++++||||+++++++.+ ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5789999999999998 789999999987544344445778899999999999999999999876 4578999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
+++|+|.+++... ..++......++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----- 176 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----- 176 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc-----
Confidence 9999999999764 4588999999999999999999984 9999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus 177 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 177 -------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY 231 (283)
T ss_pred -------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 112468899999999976 67899999999999999999999999998888887
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..+......++....++..+.+|+.+||+.||++|||+.+++..+-+
T Consensus 232 ~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~ 278 (283)
T PHA02988 232 DLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL 278 (283)
T ss_pred HHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence 77766655555444578899999999999999999995554444433
No 149
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.4e-37 Score=339.03 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=217.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-|++++.||.|+||.||++.+..++..+++|.+... .......+.+|+++++.++||||+++++++...+..|+|||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 378899999999999999999999999999998653 34456678889999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|..++... ...+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~----- 156 (282)
T cd06643 83 FCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT----- 156 (282)
T ss_pred ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-----
Confidence 99999999887653 245899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
........|++.|+|||++. +..++.++|||||||++|+|++|..||...+..
T Consensus 157 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 214 (282)
T cd06643 157 ----------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM 214 (282)
T ss_pred ----------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH
Confidence 01122346899999999984 345677999999999999999999999888776
Q ss_pred HHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 905 KTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+..+..... ........+..+.+||.+||..||.+||+ +.++++||||+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 268 (282)
T cd06643 215 RVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWT----TTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCCCEecc
Confidence 66666655432 22233446788999999999999999999 9999999999863
No 150
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.9e-37 Score=338.07 Aligned_cols=254 Identities=26% Similarity=0.438 Sum_probs=213.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE---PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 45899999999999999999999999999999998754 233445677899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06645 85 MEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--- 159 (267)
T ss_pred EeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc---
Confidence 9999999999998764 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
........|++.|+|||++. ...++.++|+|||||++|+|++|..||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~ 215 (267)
T cd06645 160 ------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch
Confidence 01112346899999999974 455788999999999999999999999766554
Q ss_pred HHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001865 905 KTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
.............+. ....+..+.+||.+||..+|++||+ +.++++|||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~ll~~~~ 267 (267)
T cd06645 216 RALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPT----AEKLLQHPF 267 (267)
T ss_pred hhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcC----HHHHhcCCC
Confidence 444443333332222 2235678999999999999999999 999999998
No 151
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.7e-37 Score=344.31 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=213.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++..++.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36999999999999999999999999999999987532 2344567889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+++++|.+++... ..+++..+..++.||+.||.|||+ .+++|+||||+|||++.++.++|+|||++.....
T Consensus 79 ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 152 (308)
T cd06615 79 EHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 152 (308)
T ss_pred eccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc----
Confidence 999999999999764 458999999999999999999997 5999999999999999999999999998743211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.....
T Consensus 153 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~ 207 (308)
T cd06615 153 -------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE 207 (308)
T ss_pred -------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH
Confidence 0112357899999999998888899999999999999999999999765543332
Q ss_pred HHHHhCC------------------------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 908 ANILHKD------------------------------------LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 908 ~~i~~~~------------------------------------~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
..+.... .+.......+.++.+|+.+||..+|++||+ +.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ 283 (308)
T cd06615 208 AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD----LKE 283 (308)
T ss_pred HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcC----HHH
Confidence 2221100 000001125678999999999999999999 999
Q ss_pred HHcCCCcCC
Q 001865 952 IKKHPFFKG 960 (1002)
Q Consensus 952 lL~Hp~f~~ 960 (1002)
+++||||.+
T Consensus 284 ll~~~~~~~ 292 (308)
T cd06615 284 LTKHPFIKR 292 (308)
T ss_pred HhcChhhhh
Confidence 999999986
No 152
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-38 Score=299.95 Aligned_cols=259 Identities=24% Similarity=0.438 Sum_probs=219.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|.-.++||+|.||+||++++..+++.||+|.++.+.. +........+|+.+|+.++|.|||+++++...+..+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 467888999999999999999999999999999986532 3333456788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||| ..+|..+...- .+.+....++.++.|++.||.++|++++.||||||.|+||+.||.+||.|||+|+.++.
T Consensus 81 e~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi----- 153 (292)
T KOG0662|consen 81 EFC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI----- 153 (292)
T ss_pred HHh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC-----
Confidence 999 77898888754 35599999999999999999999999999999999999999999999999999976542
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CCChhhHHHHHHHHHHHH-cCCCCCCCCChHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEML-YGYTPFRGKTRQKT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~-~~~~sDIwSlGvil~ell-tG~~Pf~~~~~~~~ 906 (1002)
+.+..+..+-|..|.+|.++.+.. |+...|+||.|||+.|+. .|++.|+|.+..+.
T Consensus 154 ----------------------pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq 211 (292)
T KOG0662|consen 154 ----------------------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_pred ----------------------ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence 223345567899999999998864 788999999999999999 59999999998888
Q ss_pred HHHHHhC-----CCCCCCC----------------------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 907 FANILHK-----DLKFPSS----------------------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 907 ~~~i~~~-----~~~~~~~----------------------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
.++|... .-.||.. +..+...++|++++|..+|.+|++ ++.+++||||.
T Consensus 212 lkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris----aeaalqhpyf~ 287 (292)
T KOG0662|consen 212 LKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS----AEAALQHPYFS 287 (292)
T ss_pred HHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC----HHHHhcCcccc
Confidence 8888652 1112211 112234579999999999999999 99999999998
Q ss_pred CC
Q 001865 960 GV 961 (1002)
Q Consensus 960 ~~ 961 (1002)
..
T Consensus 288 d~ 289 (292)
T KOG0662|consen 288 DF 289 (292)
T ss_pred cc
Confidence 63
No 153
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.3e-37 Score=338.04 Aligned_cols=260 Identities=35% Similarity=0.641 Sum_probs=210.5
Q ss_pred cccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHH---HHHHhCCCCCcceeEEEEeeCCeEEEEEeccC
Q 001865 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER---EILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~---~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
.||+|+||.||+|.+..+++.||+|++.+..............|. .+++...||+|+.+++++...+.+|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765433222222233343 34455689999999999999999999999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 001865 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
|++|..++... ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-------- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------
Confidence 99999988754 45999999999999999999999999999999999999999999999999998543210
Q ss_pred hhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC---ChHHHHH
Q 001865 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK---TRQKTFA 908 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~---~~~~~~~ 908 (1002)
......|+..|+|||++.+. .++.++||||+||++|+|++|+.||... .......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~ 209 (278)
T cd05606 151 ---------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (278)
T ss_pred ---------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence 11234689999999998754 6788999999999999999999999875 2233222
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CChhcHHHHHcCCCcCCCChhhhhccCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-----GSHEGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rp-----t~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
.+......++. ..+..+.+++.+||..+|.+|| + +.++++||||+.++|..+.....|
T Consensus 210 ~~~~~~~~~~~--~~s~~~~~li~~~l~~~p~~R~~~~~~~----~~~ll~~~~~~~~~~~~~~~~~~~ 272 (278)
T cd05606 210 MTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRG----AQEVKEHPFFRSLDWQMVFLQKYP 272 (278)
T ss_pred HhhccCCCCCC--cCCHHHHHHHHHHhhcCHHhccCCCCCC----HHHHHhCccccCCCchHhhhcccC
Confidence 33222333332 3588999999999999999999 7 999999999999999999655554
No 154
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=6.6e-37 Score=339.60 Aligned_cols=271 Identities=18% Similarity=0.262 Sum_probs=219.1
Q ss_pred ccccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+..++|++.+.||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4567899999999999999999997642 35589999876432 2233456778999999999999999999999
Q ss_pred eCCeEEEEEeccCCCchhHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEE
Q 001865 740 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
..+..|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||+++.++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999999997532 13356778899999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001865 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 L~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el 214 (288)
T cd05061 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214 (288)
T ss_pred ECcCCcccccccccc-------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence 999999864321100 0111223457789999999988899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc--CCCcCCCCh
Q 001865 892 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFKGVNW 963 (1002)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~--Hp~f~~~~~ 963 (1002)
++ |..||.+....+....+..+... +.....+..+.+|+.+||+.+|++||++.++++.+.+ ||||.+++|
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 215 TSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 98 89999888777766666544322 2223457889999999999999999996665555555 999999988
No 155
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=8.3e-37 Score=334.37 Aligned_cols=261 Identities=28% Similarity=0.419 Sum_probs=217.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh------HHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------NKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
+|.+.+.||.|+||.||+|.+..+++.+|+|.+........ .....+.+|+.+++.++||||+++++++...++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47888999999999999999988999999999876433221 223567889999999999999999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999999764 4589999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.... ...........|++.|+|||.+.+..++.++|+|||||++|+|++|+.||.+.+.
T Consensus 159 ~~~~---------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 217 (267)
T cd06628 159 NSLS---------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217 (267)
T ss_pred cccc---------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH
Confidence 1100 0001112235688999999999988889999999999999999999999988776
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+..+..... .......+..+.+||.+||+.||.+||+ +.++++||||
T Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 267 (267)
T cd06628 218 LQAIFKIGENAS-PEIPSNISSEAIDFLEKTFEIDHNKRPT----AAELLKHPFL 267 (267)
T ss_pred HHHHHHHhccCC-CcCCcccCHHHHHHHHHHccCCchhCcC----HHHHhhCCCC
Confidence 665555544211 1222346788999999999999999999 9999999998
No 156
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.2e-37 Score=339.79 Aligned_cols=256 Identities=28% Similarity=0.406 Sum_probs=213.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEe------e
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ------T 740 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~------~ 740 (1002)
.+.|++.+.||.|+||.||++.+..+++.+|+|++... ......+..|+.+++++ +|+||+++++++. .
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 46899999999999999999999999999999998653 23345677899999888 7999999999985 3
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+.+|++|||+.+++|.+++.......+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 56889999999999999999876556689999999999999999999999999999999999999999999999998854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
.... ........|++.|+|||++. ...++.++|||||||++|+|++|.
T Consensus 171 ~~~~---------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 171 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred hhcc---------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 3210 01112356899999999986 345778999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 896 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.||........+..+.............+..+.+||.+||..||.+||+ +.+|++||||
T Consensus 224 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~ell~~~~~ 282 (282)
T cd06636 224 PPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS----TEQLLKHPFI 282 (282)
T ss_pred CCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcC----HHHHhcCCCC
Confidence 9998766555554444433222233346789999999999999999999 9999999997
No 157
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.3e-37 Score=345.92 Aligned_cols=251 Identities=26% Similarity=0.435 Sum_probs=193.3
Q ss_pred cccccccCcEEEEEEEEc--CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--CCeEEEEEe
Q 001865 674 IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLITD 749 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~lV~E 749 (1002)
.++||+|+||.||+|.++ .+++.||+|.+.... ....+.+|+.+|+.++||||+++++++.. +..+|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 367999999999999975 467899999986532 12346789999999999999999999853 567899999
Q ss_pred ccCCCchhHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEE----ecCCcEEEEeccCC
Q 001865 750 YCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 818 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl----~~~g~vkL~DFG~a 818 (1002)
|+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 66888887532 12358999999999999999999999999999999999999 45678999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~P 897 (1002)
........ .........||+.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 215 (317)
T cd07868 160 RLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred eccCCCCc------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 65432110 01112345789999999999774 578899999999999999999999
Q ss_pred CCCCCh---------HHHHHHHHhC-C------------C-------------CCC----------CCCCCCHHHHHHHH
Q 001865 898 FRGKTR---------QKTFANILHK-D------------L-------------KFP----------SSTPTSLHAKQLMY 932 (1002)
Q Consensus 898 f~~~~~---------~~~~~~i~~~-~------------~-------------~~~----------~~~~~s~~~~~Ll~ 932 (1002)
|.+... ...+..+... . + ... .....+..+.+||.
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 295 (317)
T cd07868 216 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQ 295 (317)
T ss_pred ccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHH
Confidence 965332 1111111110 0 0 000 00113456889999
Q ss_pred HccccCcCCCCCChhcHHHHHcCCCc
Q 001865 933 RLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 933 ~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+||++||.+||| ++|+|+||||
T Consensus 296 ~mL~~dP~~R~t----~~e~l~hp~f 317 (317)
T cd07868 296 KLLTMDPIKRIT----SEQAMQDPYF 317 (317)
T ss_pred HHhccCcccCCC----HHHHhcCCCC
Confidence 999999999999 9999999998
No 158
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1e-36 Score=331.52 Aligned_cols=256 Identities=28% Similarity=0.477 Sum_probs=223.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||.|+||.||.+++..++..+++|.+..... .......+.+|+.++++++|+||+++++++...+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 58999999999999999999999999999999875432 33445678899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++.......+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 9999999999987655668999999999999999999999999999999999999999999999999985432111
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+....
T Consensus 156 -----------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08221 156 -----------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK 212 (256)
T ss_pred -----------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 012235689999999999888888999999999999999999999998888887777
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+.... .....+..+.++|.+||..+|.+||+ +.++++|||+
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~s----~~~ll~~~~l 256 (256)
T cd08221 213 IVQGNYTP-VVSVYSSELISLVHSLLQQDPEKRPT----ADEVLDQPLL 256 (256)
T ss_pred HHcCCCCC-CccccCHHHHHHHHHHcccCcccCCC----HHHHhhCcCC
Confidence 77655433 22456889999999999999999999 9999999996
No 159
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.7e-37 Score=341.61 Aligned_cols=256 Identities=25% Similarity=0.414 Sum_probs=217.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|++++.||+|+||.||++.+..+++.|++|.+.... ......+.+|+.+++.++|+||+++++.+..+...|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 58999999999999999999999999999999987543 233466788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..++..++..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 97 e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 97 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred cccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||..........
T Consensus 171 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~ 226 (296)
T cd06654 171 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226 (296)
T ss_pred ------------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH
Confidence 01123468899999999988888999999999999999999999998877654444
Q ss_pred HHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 909 NILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 909 ~i~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+.... ...+.....+..+.+|+.+||..+|++||+ +.++++||||...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~ 276 (296)
T cd06654 227 LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS----AKELLQHQFLKIA 276 (296)
T ss_pred HHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC----HHHHhhChhhhcc
Confidence 333322 222233446778999999999999999999 9999999999864
No 160
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.4e-37 Score=342.71 Aligned_cols=256 Identities=25% Similarity=0.419 Sum_probs=216.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|++++.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++|+||+++++++..++..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 68999999999999999999999999999999987542 233456788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 96 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred cccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 99999999999865 348999999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~ 225 (297)
T cd06656 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (297)
T ss_pred ------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee
Confidence 01123468899999999998888999999999999999999999998766544333
Q ss_pred HHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 909 NILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 909 ~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+... ..........+..+.+|+.+||..+|++||+ +.++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~ 275 (297)
T cd06656 226 LIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS----AKELLQHPFLKLA 275 (297)
T ss_pred eeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhccc
Confidence 23222 2222223346778899999999999999999 9999999999963
No 161
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8e-37 Score=333.98 Aligned_cols=261 Identities=28% Similarity=0.432 Sum_probs=220.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||+||+|.+..++..+++|++..... ......+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc--chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 479999999999999999999988999999999875432 225677889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|++++++|.+++..... ..+++..++.++.||+.||+|||++||+|+||+|+||++++++.++|+|||++..+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999976422 46899999999999999999999999999999999999999999999999998654322110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.........|++.|+|||++... .++.++|+|||||++|+|++|+.||...+..+.
T Consensus 159 -----------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 215 (267)
T cd06610 159 -----------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV 215 (267)
T ss_pred -----------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh
Confidence 00112345689999999998776 788899999999999999999999988877766
Q ss_pred HHHHHhCCCC-CCCC---CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKDLK-FPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~-~~~~---~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+......... ++.. ...+..+.+|+.+||..||++||+ +.+|++||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~ll~~p~~ 267 (267)
T cd06610 216 LMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT----AEELLKHKFF 267 (267)
T ss_pred HHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC----HHHHhhCCCC
Confidence 6666554322 1111 245778999999999999999999 9999999998
No 162
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.4e-37 Score=331.78 Aligned_cols=256 Identities=25% Similarity=0.471 Sum_probs=221.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 58999999999999999999999999999999875422 23344678899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---- 155 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch----
Confidence 9999999999976544568999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+.+..
T Consensus 156 -----------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08218 156 -----------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK 212 (256)
T ss_pred -----------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH
Confidence 011124588899999999988888999999999999999999999998888777777
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+.... .....+..+.++|.+||+.+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~vl~~~~~ 256 (256)
T cd08218 213 IIRGSYPP-VSSHYSYDLRNLVSQLFKRNPRDRPS----VNSILEKNFI 256 (256)
T ss_pred HhcCCCCC-CcccCCHHHHHHHHHHhhCChhhCcC----HHHHhhCcCC
Confidence 76654432 23346788999999999999999999 9999999998
No 163
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.8e-37 Score=340.09 Aligned_cols=257 Identities=26% Similarity=0.436 Sum_probs=219.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|++.+.||.|+||.||++.+..+++.|++|.+.... ......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 47999999999999999999999999999999986532 233567788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|..++... .+++.++..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 96 EYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred EecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 999999999998653 48999999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~ 225 (296)
T cd06655 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (296)
T ss_pred ------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 01123468899999999998888999999999999999999999999887766555
Q ss_pred HHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 909 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.+..... .+.....++..+.+||.+||..||.+||+ +.++++||||+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~il~~~~~~~~~ 276 (296)
T cd06655 226 LIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKLAK 276 (296)
T ss_pred HHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCC----HHHHhhChHhhhcc
Confidence 5543322 22233456788999999999999999999 99999999998753
No 164
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.6e-37 Score=335.30 Aligned_cols=254 Identities=25% Similarity=0.401 Sum_probs=211.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++.+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 468999999999999999999999999999999987542 23345677899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06646 85 MEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT--- 159 (267)
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc---
Confidence 9999999999998754 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
........|++.|+|||.+. ...++.++|+|||||++|+|++|..||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~ 215 (267)
T cd06646 160 ------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 01112346889999999984 344678999999999999999999999766544
Q ss_pred HHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001865 905 KTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
.....+....+..+. ....+..+.+||++||..+|++||+ ++++|+|+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~l~ 267 (267)
T cd06646 216 RALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPT----AERLLTHLF 267 (267)
T ss_pred hhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcC----HHHHhcCCC
Confidence 443333333332222 2345788999999999999999999 999999997
No 165
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.5e-38 Score=351.78 Aligned_cols=263 Identities=29% Similarity=0.494 Sum_probs=234.7
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC
Q 001865 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
..+...+.|.+.+.||.|.|+.|.++++..++..||||++.+..... .....+.+|+++|+.|+|||||+++.+.....
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSLNHPNIVKLFSVIETEA 128 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence 34456789999999999999999999999999999999999876544 44455899999999999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+.+|.+++++.+. ..+.+..++.++.|++.|++|||+++|||||||++|||++.+.++||+|||++..+.
T Consensus 129 ~lylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred eeEEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999999999886 447889999999999999999999999999999999999999999999999996654
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
. .....++||++.|.|||++.+..| ++.+|+||+|++||.|+.|.+||.+.
T Consensus 207 ~----------------------------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 207 Y----------------------------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred c----------------------------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 2 223457899999999999999876 56999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
+..+.-...+.+.+..|.. ++.++.+||+++|..+|.+|++ ++++.+|.|.....
T Consensus 259 ~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~----~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 259 NLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGP----CDQIMKDRWRNDLL 313 (596)
T ss_pred ccccccchheeeeecccce--eechhHHHHHHhhccCccccCC----HHHhhhhcccchhh
Confidence 8888888888887776654 5667899999999999999999 99999999988643
No 166
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.5e-36 Score=332.51 Aligned_cols=259 Identities=26% Similarity=0.393 Sum_probs=212.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--CCeEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVC 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~ 745 (1002)
.|++.+.||+|+||.||+|.+..++..|++|.+...... .......+.+|+.+++.++||||+++++++.. ...++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 699999999999999999999999999999998754321 22345678889999999999999999998875 46789
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
++|||+++++|.+++... ..++...++.++.||+.||+|||+++|+|+||||+||+++.++.++|+|||++.......
T Consensus 83 l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 999999999999999764 348999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
. .........|+..|+|||++.+..++.++|||||||++|+|++|+.||.......
T Consensus 161 ~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~ 216 (266)
T cd06651 161 M------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA 216 (266)
T ss_pred c------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH
Confidence 0 0001123458899999999998888999999999999999999999998776666
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
.+..+.............+..+.+|+ +||..+|++||+ ++++++||||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~----~~eil~hp~~~ 265 (266)
T cd06651 217 AIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPS----AEELLRHPFAQ 265 (266)
T ss_pred HHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcC----HHHHhcCcccc
Confidence 55554433222222233577788888 577789999999 99999999996
No 167
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.2e-36 Score=336.51 Aligned_cols=256 Identities=27% Similarity=0.426 Sum_probs=210.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++.....+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999999999999999875421 2223345678999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|..++... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07847 80 EYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-- 155 (286)
T ss_pred eccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc--
Confidence 999888888776543 3589999999999999999999999999999999999999999999999999865421110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
......++..|+|||++.+ ..++.++||||||+++|+|++|++||.+.+..+..
T Consensus 156 -------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~ 210 (286)
T cd07847 156 -------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQL 210 (286)
T ss_pred -------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 1123457889999999876 45788999999999999999999999987765544
Q ss_pred HHHHhCC-------------------CCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHKD-------------------LKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~-------------------~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+.... ...+. ....+..+.+||.+||+.+|++||+ +.+++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~~~~f 286 (286)
T cd07847 211 YLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS----CEELLEHPYF 286 (286)
T ss_pred HHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC----HHHHhcCCCC
Confidence 4432210 00111 1234677899999999999999999 9999999998
No 168
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.8e-37 Score=335.42 Aligned_cols=255 Identities=38% Similarity=0.725 Sum_probs=217.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||+|.+..++..||+|++.+...........+.+|++++++++||||+++++++..+...|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48999999999999999999998999999999987654444567788999999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|..++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc----
Confidence 99999999999765 468999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--HHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTF 907 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--~~~~ 907 (1002)
......|+..|+|||++.+..++.++|+||||+++|+|++|..||...+. ...+
T Consensus 155 ------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (258)
T cd05578 155 ------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210 (258)
T ss_pred ------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 11234688899999999888889999999999999999999999987663 2222
Q ss_pred HHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~-~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..... .....+ ...+..+.++|.+||..||.+||++. +.++++||||
T Consensus 211 ~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~~~~--~~~l~~~~~~ 258 (258)
T cd05578 211 RAKQETADVLYP--ATWSTEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258 (258)
T ss_pred HHHhccccccCc--ccCcHHHHHHHHHHccCChhHcCCcc--HHHHhcCCCC
Confidence 22222 222222 34678899999999999999999932 3999999998
No 169
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.9e-37 Score=340.26 Aligned_cols=255 Identities=23% Similarity=0.417 Sum_probs=206.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||.|+||.||+|.+..+|..||+|.++.... .......+.+|+.+++.++||||+++++++...+..|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 48899999999999999999999999999999875422 22233556789999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+. ++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---- 153 (284)
T cd07839 80 YCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV---- 153 (284)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC----
Confidence 995 6888877653 2458999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC-CCCChHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF-RGKTRQKTF 907 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf-~~~~~~~~~ 907 (1002)
.......+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~ 210 (284)
T cd07839 154 -----------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 210 (284)
T ss_pred -----------------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH
Confidence 111234578899999998764 4688999999999999999988885 444444444
Q ss_pred HHHHhCC--------------CC---CC----------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHKD--------------LK---FP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~--------------~~---~~----------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+.... .. ++ .....+..+.+||.+||+.||.+||| ++++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~il~h~~f 284 (284)
T cd07839 211 KRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS----AEEALQHPYF 284 (284)
T ss_pred HHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCC----HHHHhcCCCC
Confidence 3332210 00 00 01235778899999999999999999 9999999998
No 170
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.9e-36 Score=371.65 Aligned_cols=151 Identities=39% Similarity=0.653 Sum_probs=139.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++++...........+..|+.+++.++||||+++++++...+++|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999876555556667888999999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
|||+.|++|.+++... ..+++..++.|+.||+.||.|||.+|||||||||+|||++.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999764 4589999999999999999999999999999999999999999999999999864
No 171
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.6e-36 Score=331.92 Aligned_cols=261 Identities=24% Similarity=0.347 Sum_probs=215.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc---ChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+|++.+.||.|+||.||++.+ .+++.+|+|.+...... .......+.+|+++++.++|+||+++++++...+.+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999987 57889999988753211 22344668889999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+++++|.+++... ..+++..+..++.||+.||+|||+.||+|+||+|+||++++++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999764 3589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.. ..........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 158 ~~---------------------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~ 216 (265)
T cd06631 158 HG---------------------THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA 216 (265)
T ss_pred cc---------------------cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH
Confidence 00 001112335689999999999988889999999999999999999999987766555
Q ss_pred HHHHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+.... ...+.....+..+.+||++||..+|.+||+ +.++++||||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~ 265 (265)
T cd06631 217 MFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPS----ALQLLRHDFL 265 (265)
T ss_pred HHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 54444332 222233457888999999999999999999 9999999997
No 172
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.4e-36 Score=335.85 Aligned_cols=257 Identities=30% Similarity=0.490 Sum_probs=214.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 58999999999999999999999999999999876532 23345678899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+ +++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 99 999999987543 5699999999999999999999999999999999999999999999999999865432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~ 211 (286)
T cd07832 155 -----------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211 (286)
T ss_pred -----------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH
Confidence 112234689999999998654 45889999999999999999999998877766655
Q ss_pred HHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 909 NILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 909 ~i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
.+.... ..++. ....+..+.+||++||..+|++||+ ++++++||||.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~~l~h~~~~ 286 (286)
T cd07832 212 IVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS----AAEALRHPYFT 286 (286)
T ss_pred HHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC----HHHHhhCcCcC
Confidence 554311 01111 1234678899999999999999999 99999999994
No 173
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=337.34 Aligned_cols=262 Identities=24% Similarity=0.421 Sum_probs=215.4
Q ss_pred cccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--C----Ccce
Q 001865 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--P----FVPA 733 (1002)
Q Consensus 660 ~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h--p----nIv~ 733 (1002)
+..+..+ .++|.+++.+|+|.||.|-.|.+..++..+|||+++.- ....+...-|+++|.++.+ | -+|+
T Consensus 81 ~~~gD~l-~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~ 155 (415)
T KOG0671|consen 81 YQVGDIL-TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQ 155 (415)
T ss_pred EEecccc-ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 3344433 68999999999999999999999999999999998742 2233455678999999932 2 5789
Q ss_pred eEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC------
Q 001865 734 LYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------ 807 (1002)
Q Consensus 734 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~------ 807 (1002)
+.++|+..+++|||+|.+ |.|+++++..+...+++..+++.|+.||+.+|+|||+++++|.||||+|||+.+.
T Consensus 156 m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~ 234 (415)
T KOG0671|consen 156 MRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTY 234 (415)
T ss_pred eehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEe
Confidence 999999999999999999 9999999999888999999999999999999999999999999999999999532
Q ss_pred --------------CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC
Q 001865 808 --------------GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 873 (1002)
Q Consensus 808 --------------g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~ 873 (1002)
-.++|+|||.|..-. ....+.+.|..|+|||++.+-
T Consensus 235 ~~k~~~~~~r~~ks~~I~vIDFGsAtf~~------------------------------e~hs~iVsTRHYRAPEViLgL 284 (415)
T KOG0671|consen 235 NPKKKVCFIRPLKSTAIKVIDFGSATFDH------------------------------EHHSTIVSTRHYRAPEVILGL 284 (415)
T ss_pred ccCCccceeccCCCcceEEEecCCcceec------------------------------cCcceeeeccccCCchheecc
Confidence 248999999885422 123567899999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHh------------------CCCCCCCC------------
Q 001865 874 GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK---TFANILH------------------KDLKFPSS------------ 920 (1002)
Q Consensus 874 ~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~---~~~~i~~------------------~~~~~~~~------------ 920 (1002)
+++.++||||+||||+||++|...|+..++.+ +++.|+. +.+.|+..
T Consensus 285 GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ 364 (415)
T KOG0671|consen 285 GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEP 364 (415)
T ss_pred CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcC
Confidence 99999999999999999999999999877665 3333322 12222211
Q ss_pred -----------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 921 -----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 921 -----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
......+.+||++||.+||.+|+| +.|+|.||||+..
T Consensus 365 ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT----l~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 365 CKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT----LREALSHPFFARL 412 (415)
T ss_pred CccHHHHhccCcHHHhHHHHHHHHHHccCcccccc----HHHHhcCHHhhcC
Confidence 001225789999999999999999 9999999999974
No 174
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=344.48 Aligned_cols=258 Identities=29% Similarity=0.475 Sum_probs=221.2
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
.+.||+|.||+||-+.++.+|+.||||++.+-.+..+. ...+.+|+.||+++.||.||.+--.|+..+.+++|||.+ .
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-H 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-c
Confidence 36799999999999999999999999999987654443 378899999999999999999999999999999999999 5
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC---CcEEEEeccCCcccCCCCCCCCC
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
|++.+++-....+.|++...++++.||+.||.|||-+||+|+||||+|||+.+. -++||||||+|+.+..+.
T Consensus 647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----- 721 (888)
T KOG4236|consen 647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----- 721 (888)
T ss_pred chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh-----
Confidence 555555555556789999999999999999999999999999999999999754 369999999998875332
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i 910 (1002)
...+++|||.|+|||++....|+..-|+||.|+|+|--++|.+||..+. ++-.+|
T Consensus 722 -----------------------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQI 776 (888)
T KOG4236|consen 722 -----------------------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQI 776 (888)
T ss_pred -----------------------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHh
Confidence 1236799999999999999999999999999999999999999997653 344455
Q ss_pred HhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC-Chhhhh
Q 001865 911 LHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV-NWALVR 967 (1002)
Q Consensus 911 ~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~-~~~~~~ 967 (1002)
....+-+|. +..++.++++||..+|+..-.+|.+ +++.|.|||+++. .|-+++
T Consensus 777 QNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRys----vdk~lsh~Wlq~yq~w~DLR 832 (888)
T KOG4236|consen 777 QNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYS----VDKSLSHPWLQDYQTWLDLR 832 (888)
T ss_pred hccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcc----hHhhccchhhhcchHHHHHH
Confidence 555554443 3457899999999999999999999 9999999999984 466664
No 175
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.2e-36 Score=328.47 Aligned_cols=255 Identities=28% Similarity=0.476 Sum_probs=219.3
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||+|+||.||+|.+..++..+|+|.+..... .......+.+|+.+++.++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 58899999999999999999999999999999976533 33446778899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCcccCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+++++|.+++.......+++..+..++.|++.+|+|||++||+|+||||+||+++.+ +.++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK---- 155 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC----
Confidence 9999999999987555568999999999999999999999999999999999999855 46899999998553211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.+.+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 211 (256)
T cd08220 156 ------------------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVL 211 (256)
T ss_pred ------------------------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 01123468899999999998888899999999999999999999998887777666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+...... +.....+..+.+|+.+||..+|++||| +.++++||||
T Consensus 212 ~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~ll~~p~~ 256 (256)
T cd08220 212 KIMSGTFA-PISDRYSPDLRQLILSMLNLDPSKRPQ----LSQIMAQPIC 256 (256)
T ss_pred HHHhcCCC-CCCCCcCHHHHHHHHHHccCChhhCCC----HHHHhhCCCC
Confidence 66554332 223346888999999999999999999 9999999997
No 176
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=346.70 Aligned_cols=248 Identities=26% Similarity=0.430 Sum_probs=214.3
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC
Q 001865 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.|+|.+....-+..||+|+-|.||+++. .++.||||.++. .-..+|+-|++|+||||+.+.+++....
T Consensus 118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsP 185 (904)
T KOG4721|consen 118 LWEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSP 185 (904)
T ss_pred hccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCc
Confidence 4556666777788999999999999998 677899997752 2235788899999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|||||||..|.|..+|+.. ..++......+.++|+.|+.|||.+.|||||||.-||||+.+..|||+|||-++...
T Consensus 186 cyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 186 CYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred eeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 999999999999999999864 568899999999999999999999999999999999999999999999999886654
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
... ..-+++||..|||||++...+.+.++|||||||+|||||||..||..-+
T Consensus 264 ~~S----------------------------TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd 315 (904)
T KOG4721|consen 264 DKS----------------------------TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD 315 (904)
T ss_pred hhh----------------------------hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc
Confidence 221 2236899999999999999999999999999999999999999998766
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
...++--+-...+.+|-+..++..++=||+.||.-.|.+||+ ..+||.|=
T Consensus 316 ssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPS----Frqil~Hl 365 (904)
T KOG4721|consen 316 SSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPS----FRQILLHL 365 (904)
T ss_pred hheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCcc----HHHHHHHH
Confidence 555444444445666777778889999999999999999999 77888774
No 177
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.2e-36 Score=336.30 Aligned_cols=256 Identities=27% Similarity=0.454 Sum_probs=211.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++++.||.|++|.||+|.+..++..||||.++.... .......+.+|++++++++||||+++++++...+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998875422 22334567889999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+ .++|..++.......+++..++.++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---- 154 (284)
T cd07860 80 FL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---- 154 (284)
T ss_pred cc-ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc----
Confidence 99 5689998876655678999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......+++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+......
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~ 211 (284)
T cd07860 155 -----------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 211 (284)
T ss_pred -----------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 0112335788999999987644 5789999999999999999999998876655444
Q ss_pred HHHhCCC------------------CCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 909 NILHKDL------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~------------------~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+..... .++. ....+..+.+||.+||+.||.+||| ++++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~~~f 284 (284)
T cd07860 212 RIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS----AKAALAHPFF 284 (284)
T ss_pred HHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC----HHHHhcCCCC
Confidence 4332100 0010 1235678899999999999999999 9999999998
No 178
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.7e-36 Score=330.15 Aligned_cols=260 Identities=25% Similarity=0.367 Sum_probs=213.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--CCeE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 744 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~ 744 (1002)
..|++.+.||+|+||.||++.+..+++.||+|.+..... ........+.+|+.+++.++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 479999999999999999999999999999998864321 123445678889999999999999999999876 3578
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 8999999999999998764 34889999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.. .........|+..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 215 (265)
T cd06652 160 CL------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM 215 (265)
T ss_pred cc------------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH
Confidence 00 001122346899999999998888899999999999999999999999877666
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
..+..+.............+..+.++|.+||. +|.+||+ ++++++|||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~----~~~il~~~~~~ 265 (265)
T cd06652 216 AAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPS----ADELLRHTFVH 265 (265)
T ss_pred HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCC----HHHHhcCcccC
Confidence 65555543332222233456788999999995 9999999 99999999984
No 179
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.4e-36 Score=347.16 Aligned_cols=255 Identities=26% Similarity=0.491 Sum_probs=209.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|.+.+.. ........+.+|+.++++++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 478999999999999999999999999999999987542 2334456677899999999999999999988643
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...|+||||+ +++|.+.+... ++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred CcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 3579999999 56888887643 899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......|++.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 169 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 169 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CCC----------------------------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 211 0112346889999999999999999999999999999999999999877
Q ss_pred ChHHHHHHHHhCC----------------------C--------------CCCC-----CCCCCHHHHHHHHHccccCcC
Q 001865 902 TRQKTFANILHKD----------------------L--------------KFPS-----STPTSLHAKQLMYRLLHRDPK 940 (1002)
Q Consensus 902 ~~~~~~~~i~~~~----------------------~--------------~~~~-----~~~~s~~~~~Ll~~~L~~dP~ 940 (1002)
+....+..+.... . .++. ....+..+.+||.+||+.||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 300 (353)
T cd07850 221 DHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPE 300 (353)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChh
Confidence 6555444432210 0 0000 012345688999999999999
Q ss_pred CCCCChhcHHHHHcCCCcCC
Q 001865 941 SRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 941 ~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+||| +.++|+||||+.
T Consensus 301 ~R~t----~~eiL~~~~~~~ 316 (353)
T cd07850 301 KRIS----VDDALQHPYINV 316 (353)
T ss_pred hCcC----HHHHhcChhHhh
Confidence 9999 999999999985
No 180
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=7.5e-37 Score=351.71 Aligned_cols=257 Identities=22% Similarity=0.331 Sum_probs=208.7
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 738 (1002)
.+..++|++.+.||+|+||.||+|.+...+ ..||+|+++... .......+.+|+.+++.+ +|+||+++++++
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 345668999999999999999999875443 579999997542 233456788999999999 899999999999
Q ss_pred eeCCeEEEEEeccCCCchhHHHhhCC------------------------------------------------------
Q 001865 739 QTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 764 (1002)
...+.+|+|||||.+|+|.+++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999999999999986421
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 765 --------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 765 --------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~---- 267 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN---- 267 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc----
Confidence 12478889999999999999999999999999999999999999999999999854321100
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 909 (1002)
........+++.|+|||++.+..++.++|||||||++|+|++ |+.||........+..
T Consensus 268 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~ 326 (374)
T cd05106 268 ---------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK 326 (374)
T ss_pred ---------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH
Confidence 001122345678999999998889999999999999999997 9999988765555555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
+.............+.++.+|+.+||+.||.+||++.++
T Consensus 327 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l 365 (374)
T cd05106 327 MVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQI 365 (374)
T ss_pred HHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 555544444444467899999999999999999994443
No 181
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2e-36 Score=331.63 Aligned_cols=254 Identities=19% Similarity=0.268 Sum_probs=210.3
Q ss_pred cccCCccccccccccCcEEEEEEEEc---CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
++..+|++.+.||+|+||.||++.+. ..+..+|+|.++... .......+.+|+.+++.++||||+++++++..++
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 44568999999999999999999875 346689999987542 2334467889999999999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+++++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||.+....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999999997643 458999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
... ........++..|+|||++.+..++.++|||||||++|++++ |..||.+.
T Consensus 159 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 159 SEA--------------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred ccc--------------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 100 001112345678999999999999999999999999999775 99999988
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
+....+..+..+ ...+....++..+.+++.+||+.+|.+||+ +++|+
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~RP~----~~~i~ 259 (266)
T cd05064 213 SGQDVIKAVEDG-FRLPAPRNCPNLLHQLMLDCWQKERGERPR----FSQIH 259 (266)
T ss_pred CHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCCchhCCC----HHHHH
Confidence 877777666544 333444557888999999999999999999 55554
No 182
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.5e-36 Score=329.29 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=216.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||+|.+..+++.+++|++... .......+.+|+.+++.++||||+++++++...+.+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE---PGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC---chhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5899999999999999999999999999999999754 2335677889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++... ...+++..++.++.|++.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---- 154 (262)
T cd06613 80 EYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT---- 154 (262)
T ss_pred eCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh----
Confidence 999999999998764 245899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~---~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
........|+..|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+...
T Consensus 155 -----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 155 -----------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred -----------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0111235688899999999776 78889999999999999999999999877666
Q ss_pred HHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001865 906 TFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
....+....+..+. ....+..+.+||.+||..+|..||+ +.+++.|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~ 262 (262)
T cd06613 212 ALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT----ATKLLQHPF 262 (262)
T ss_pred HHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCC----HHHHhcCCC
Confidence 65555554333222 2234678899999999999999999 999999998
No 183
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.1e-36 Score=334.32 Aligned_cols=258 Identities=24% Similarity=0.389 Sum_probs=214.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCC-----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
+..++|++++.||+|+||.||++.+...+ ..+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34568999999999999999999986655 689999987542 34445678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~ 806 (1002)
.+..|++|||+++++|.+++..... ..++...++.++.||+.||.|||++||+|+||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 9999999999999999999975321 45888999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHH
Q 001865 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (1002)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGv 886 (1002)
++.++|+|||++........ ........+++.|+|||.+.+..++.++|||||||
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~ 214 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY-------------------------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGV 214 (283)
T ss_pred CCcEEECCCcceeecccccc-------------------------ccccCCCcccccccCHHHhccCcCchhhhHHHHHH
Confidence 99999999999864321110 01122345788999999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 887 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 887 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
++|+|++ |..||.+.+..+....+..+.. .+....++..+.+|+.+||+.||.+||+ +.+++++
T Consensus 215 il~el~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~l~~~c~~~~p~~Rp~----~~~i~~~ 279 (283)
T cd05048 215 VLWEIFSYGLQPYYGFSNQEVIEMIRSRQL-LPCPEDCPARVYALMIECWNEIPARRPR----FKDIHTR 279 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-CCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 9999997 9999999888777766655433 2334457889999999999999999999 6676653
No 184
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.5e-36 Score=328.04 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=215.6
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||++.+..+++.|++|.+.... ....+.+|+.+++.++||||+++++++......|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 58999999999999999999998889999999987542 2678889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++... ...+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--- 153 (256)
T cd06612 78 EYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--- 153 (256)
T ss_pred ecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc---
Confidence 999999999998653 3468999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||..........
T Consensus 154 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~ 209 (256)
T cd06612 154 ------------------------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF 209 (256)
T ss_pred ------------------------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh
Confidence 01123457889999999998889999999999999999999999998776655444
Q ss_pred HHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 909 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+..... .+......+..+.+||.+||+.||++||+ +.++|+||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~il~~~~~ 256 (256)
T cd06612 210 MIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS----AIQLLQHPFI 256 (256)
T ss_pred hhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC----HHHHhcCCCC
Confidence 4333221 12222345778999999999999999999 9999999997
No 185
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.4e-36 Score=349.69 Aligned_cols=259 Identities=22% Similarity=0.324 Sum_probs=208.7
Q ss_pred ccccCCccccccccccCcEEEEEEEE-----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 738 (1002)
.+..++|++.+.||+|+||.||+|.+ ..++..||+|+++... .......+.+|+.+++.+ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 34566899999999999999999974 3457789999987542 233446788999999999 899999999999
Q ss_pred eeCCeEEEEEeccCCCchhHHHhhCC------------------------------------------------------
Q 001865 739 QTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 764 (1002)
...+..|+|||||++|+|.+++....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999999999999986421
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 765 -------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 765 -------------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 1247888999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
. ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 269 ~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~ 323 (375)
T cd05104 269 N-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD 323 (375)
T ss_pred c-------------------------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch
Confidence 0 001112345678999999999999999999999999999997 99999876654
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..+...+............+.++.+||.+||+.||++||+ +.++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 369 (375)
T cd05104 324 SKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPT----FKQIVQ 369 (375)
T ss_pred HHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcC----HHHHHH
Confidence 4444454443333333345788999999999999999999 555543
No 186
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.3e-36 Score=338.07 Aligned_cols=255 Identities=27% Similarity=0.464 Sum_probs=216.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|.....||.|+||.||++.+..++..||||.+... .......+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 3566678899999999999999999999999998643 2344566889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 99 e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---- 171 (292)
T cd06658 99 EFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE---- 171 (292)
T ss_pred eCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc----
Confidence 99999999998854 34899999999999999999999999999999999999999999999999988543211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
........|++.|+|||.+.+..++.++||||||+++|+|++|+.||........+.
T Consensus 172 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~ 228 (292)
T cd06658 172 -----------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR 228 (292)
T ss_pred -----------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123568999999999988889999999999999999999999998877766555
Q ss_pred HHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 909 NILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 909 ~i~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+.... ...+.....+..+.+||.+||..||.+||| ++++++||||..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~~~ 277 (292)
T cd06658 229 RIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRAT----AQELLQHPFLKL 277 (292)
T ss_pred HHHhcCCCccccccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhhc
Confidence 544321 222333346788999999999999999999 999999999996
No 187
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-36 Score=338.74 Aligned_cols=264 Identities=28% Similarity=0.390 Sum_probs=214.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--CeE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 744 (1002)
..++|++.+.||.|+||.||+|.+..+|..||+|.++.... .......+.+|+.++++++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 45789999999999999999999999999999999875422 112223456799999999999999999998754 578
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYC-EQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecC-CCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999999 568888887542 55899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. .......+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~ 214 (309)
T cd07845 162 A---------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE 214 (309)
T ss_pred c---------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0 01112245788999999865 4578899999999999999999999998888
Q ss_pred HHHHHHHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 904 QKTFANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 904 ~~~~~~i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
...+..+.... ...+. ....+..+.+||.+||+.||++||| +.+++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~~il~h 290 (309)
T cd07845 215 IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRAT----AEEALES 290 (309)
T ss_pred HHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcC----HHHHhcC
Confidence 77776665421 00110 0124678899999999999999999 9999999
Q ss_pred CCcCCCChh
Q 001865 956 PFFKGVNWA 964 (1002)
Q Consensus 956 p~f~~~~~~ 964 (1002)
|||+.....
T Consensus 291 ~~f~~~~~~ 299 (309)
T cd07845 291 SYFKEKPLP 299 (309)
T ss_pred hhhccCCCC
Confidence 999974333
No 188
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-38 Score=349.60 Aligned_cols=250 Identities=26% Similarity=0.419 Sum_probs=210.3
Q ss_pred cccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCc
Q 001865 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGE 755 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggs 755 (1002)
+||.|.||+||.++|..|...+|||.+... +......+..||.+-++|+|.|||++++++..++++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 499999999999999999999999988643 45566778899999999999999999999999999999999999999
Q ss_pred hhHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEe-cCCcEEEEeccCCcccCCCCCCCCCcc
Q 001865 756 LFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 756 L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~-~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
|.+++.... +++ ++..+..|.+||++||+|||.+.|||||||-+|+|++ -.|.+||+|||-++.+..
T Consensus 659 LSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--------- 728 (1226)
T KOG4279|consen 659 LSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--------- 728 (1226)
T ss_pred HHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc---------
Confidence 999998764 346 8899999999999999999999999999999999997 578999999998855421
Q ss_pred hhhhhcccCCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH-HHH
Q 001865 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT-FAN 909 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~--~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~-~~~ 909 (1002)
-.....++.||+.|||||++..+ .|+.++|||||||++.||.||++||........ +-+
T Consensus 729 ------------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk 790 (1226)
T KOG4279|consen 729 ------------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK 790 (1226)
T ss_pred ------------------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh
Confidence 12234578899999999999765 478899999999999999999999976433222 211
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+---..-.|.+..++.+++.||.+|+.++|..||+ |.++|..||++.
T Consensus 791 VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~s----A~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 791 VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPS----AKDLLQDPFLQH 837 (1226)
T ss_pred hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCcc----HHHhccCccccc
Confidence 11111222333346889999999999999999999 999999999986
No 189
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.2e-36 Score=329.33 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=212.0
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+...+|.+.+.||+|+||.||+|.+..+++.+|+|.+... ......+.+|+.+++.++||||+++++++...+.++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 4566899999999999999999999999999999998753 233567888999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+++++|.+++.......++...++.++.|++.||+|||++|++|+||||+||++++++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
. .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus 159 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 212 (263)
T cd05052 159 Y--------------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 212 (263)
T ss_pred e--------------------------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 0 00112234678999999998889999999999999999998 99999988777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+....+... ...+.....+..+.+|+.+||..||++||++.+
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 254 (263)
T cd05052 213 QVYELLEKG-YRMERPEGCPPKVYELMRACWQWNPSDRPSFAE 254 (263)
T ss_pred HHHHHHHCC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 666665543 333344457889999999999999999999444
No 190
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.1e-36 Score=336.96 Aligned_cols=255 Identities=24% Similarity=0.342 Sum_probs=205.0
Q ss_pred ccCCccccccccccCcEEEEEEEEcC----------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 730 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn 730 (1002)
..++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++.+++|||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCC
Confidence 35689999999999999999998632 34579999987542 3444567889999999999999
Q ss_pred cceeEEEEeeCCeEEEEEeccCCCchhHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcc
Q 001865 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------------TKVLKEDAVRFYAAEVVVALEYLHCQGII 793 (1002)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------------~~~l~~~~i~~i~~qil~aL~~LH~~gIi 793 (1002)
|+++++++...+..|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999986531 12467788999999999999999999999
Q ss_pred cCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC
Q 001865 794 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 873 (1002)
Q Consensus 794 HrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~ 873 (1002)
||||||+|||++.++.+||+|||++....... .........++..|+|||++.+.
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~ 215 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGD-------------------------YYRIQGRAVLPIRWMAWECILMG 215 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCc-------------------------eeEecCcCCCCccccCHHHHhcC
Confidence 99999999999999999999999985432110 00112234567899999999888
Q ss_pred CCCChhhHHHHHHHHHHHHc--CCCCCCCCChHHHHHHHHh---C---CCCCCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001865 874 GHTSAVDWWALGILLYEMLY--GYTPFRGKTRQKTFANILH---K---DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 874 ~~~~~sDIwSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~---~---~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
.++.++|||||||++|+|++ |..||.+.+....+..+.. . .........++..+.+|+.+||..||.+|||
T Consensus 216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs- 294 (304)
T cd05096 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPS- 294 (304)
T ss_pred CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcC-
Confidence 89999999999999999986 6788887766655544322 1 1112223456788999999999999999999
Q ss_pred hhcHHHH
Q 001865 946 HEGANEI 952 (1002)
Q Consensus 946 ~~~a~el 952 (1002)
+.+|
T Consensus 295 ---~~~i 298 (304)
T cd05096 295 ---FSDI 298 (304)
T ss_pred ---HHHH
Confidence 6666
No 191
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=347.94 Aligned_cols=264 Identities=21% Similarity=0.283 Sum_probs=215.1
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..|.|..+...+...||+|.||+||++++-. .||||++... ...++..+.|.+|+.++++-+|.||+-+.|++...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~-~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVD-DPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecC-CCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 4566777889999999999999999999955 4999999876 34566889999999999999999999999999998
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+. .||+.+|+|.+|+.++.... ..|...+.+.|++||++|+.|||.++|||||||..|||+.++++|||+|||++..-
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 87 99999999999999997653 56999999999999999999999999999999999999999999999999998432
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~---~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
. .+ .+ ........|...|||||++.. .+|++.+||||||+++|||++|.+||
T Consensus 539 ~-------------~w--~g----------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPy 593 (678)
T KOG0193|consen 539 T-------------RW--SG----------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPY 593 (678)
T ss_pred e-------------ee--cc----------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCc
Confidence 1 00 00 011223458899999999864 47889999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCC---CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001865 899 RGKTRQKTFANILHKDLK---FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~---~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
.......++-.+-++... ......++.++++|+..||.+++++||.+.++...|+.++
T Consensus 594 si~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 594 SIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred CCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 954444443333333211 1122346778999999999999999999777666555444
No 192
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5e-38 Score=315.93 Aligned_cols=266 Identities=24% Similarity=0.331 Sum_probs=215.4
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe-----
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----- 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----- 739 (1002)
.|+..+|++.+.||+|||+-||+++...+++.||+|.+.... .+..+...+|++..++++||||++++++..
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 467899999999999999999999999999999999998653 566778899999999999999999988753
Q ss_pred eCCeEEEEEeccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCcEEEecCCcEEEEec
Q 001865 740 TKTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~g--IiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
.....|+++.|+..|+|.+.++.. ++..+++.++..|+.+|++||++||+.. .+||||||.|||++..+.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 334699999999999999999853 3457999999999999999999999998 999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC---CCCChhhHHHHHHHHHHHH
Q 001865 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~---~~~~~sDIwSlGvil~ell 892 (1002)
|.++.....-. ...+ ............|..|+|||.+.-. ..+.++|||||||+||.|+
T Consensus 174 GS~~~a~i~i~----~~~~--------------a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m 235 (302)
T KOG2345|consen 174 GSATQAPIQIE----GSRQ--------------ALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM 235 (302)
T ss_pred cCccccceEee----chHH--------------HHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH
Confidence 99865321100 0000 0001112334679999999998544 4567999999999999999
Q ss_pred cCCCCCCCCC--hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 893 YGYTPFRGKT--RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 893 tG~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+|..||.... .....-.+....+.+|...+.|..+.+||++||+.||.+||+ +.+++.+
T Consensus 236 f~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~----i~~ll~~ 296 (302)
T KOG2345|consen 236 FGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPT----IPELLSK 296 (302)
T ss_pred HcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCC----HHHHHHH
Confidence 9999995321 111222334457788988889999999999999999999999 7777653
No 193
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.5e-36 Score=331.40 Aligned_cols=256 Identities=29% Similarity=0.438 Sum_probs=212.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCC----
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~---- 742 (1002)
.++|++.+.||.|+||.||+|.+..+++.+++|++.... .....+.+|+.+++++ +|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 468999999999999999999999899999999987542 2346788999999998 7999999999997544
Q ss_pred --eEEEEEeccCCCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001865 743 --HVCLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
.+|+||||+++++|.+++.... ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999999999987533 456899999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHc
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-----~~~~~~sDIwSlGvil~ellt 893 (1002)
...... ........|++.|+|||++.. ..++.++|||||||++|+|++
T Consensus 161 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 161 AQLDST---------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred eecccc---------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 543211 011123468999999999854 345678999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 894 GYTPFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
|..||...........+...... .......+..+.+||.+||..||++||| +.++++|||+
T Consensus 214 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~ll~~~~~ 275 (275)
T cd06608 214 GKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPF----MEELLEHPFI 275 (275)
T ss_pred CCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcC----HHHHhcCCCC
Confidence 99999877666666666554322 2222235678999999999999999999 9999999996
No 194
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-36 Score=334.69 Aligned_cols=257 Identities=30% Similarity=0.457 Sum_probs=213.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..++..||+|.++.. ........+.+|+.++++++||||+++++++..++.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 3789999999999999999999989999999988753 13444577889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 749 DYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+++++|..++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 9999999999887531 2368999999999999999999997 59999999999999999999999999988543210
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC------CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~------~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
......|++.|+|||++.+.. ++.++|||||||++|+|++|+.||..
T Consensus 157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 157 ---------------------------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred ---------------------------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 112345888999999985543 47799999999999999999999976
Q ss_pred CChHHHHHH---HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 901 KTRQKTFAN---ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 901 ~~~~~~~~~---i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
......... +.... ........+..+.+||.+||..+|++||+ +.++++||||...
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~~~~~~~~ 268 (286)
T cd06622 210 ETYANIFAQLSAIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPT----YAQLLEHPWLVKY 268 (286)
T ss_pred cchhhHHHHHHHHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCC----HHHHhcChhhhhc
Confidence 554443332 22222 22222347889999999999999999999 9999999999874
No 195
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.6e-36 Score=331.58 Aligned_cols=256 Identities=28% Similarity=0.456 Sum_probs=215.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++++...+..|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 46889999999999999999999999999999987653 2345567889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+.+++|.+++.... ..+++..+..++.||+.||+|||+ .|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--- 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--- 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence 9999999999997643 568999999999999999999999 99999999999999999999999999988443210
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-----C
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-----T 902 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~-----~ 902 (1002)
......|+..|+|||.+.+..++.++||||||+++|+|++|..||... .
T Consensus 155 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 208 (265)
T cd06605 155 --------------------------LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG 208 (265)
T ss_pred --------------------------HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence 001156888999999999989999999999999999999999999754 2
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.......+.............+..+.+||.+||..||++||+ +.+++.||||+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~~~ 262 (265)
T cd06605 209 IFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPS----YKELLEHPFIKK 262 (265)
T ss_pred HHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcC----HHHHhhCchhhc
Confidence 233344444332211111126788999999999999999999 999999999986
No 196
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.7e-36 Score=327.04 Aligned_cols=252 Identities=26% Similarity=0.476 Sum_probs=216.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||++.+..+++.||+|.++... .......+.+|+.+++.++|+||+++++++..++.+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 5889999999999999999999999999999987532 23455677889999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~----- 153 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP----- 153 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-----
Confidence 999999999987655566899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......
T Consensus 154 ----------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~ 211 (255)
T cd08219 154 ----------------------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK 211 (255)
T ss_pred ----------------------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH
Confidence 0112235689999999999988899999999999999999999999998877777666
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+..+.... .....+..+.+||.+||..||++||+ +.+++.-
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~ 252 (255)
T cd08219 212 VCQGSYKP-LPSHYSYELRSLIKQMFKRNPRSRPS----ATTILSR 252 (255)
T ss_pred HhcCCCCC-CCcccCHHHHHHHHHHHhCCcccCCC----HHHHhhc
Confidence 66554332 22346788999999999999999999 7777653
No 197
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.7e-36 Score=333.90 Aligned_cols=257 Identities=25% Similarity=0.426 Sum_probs=215.3
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++++.||+|+||+||++.+..+++.||+|++.... .......+.+|+++++.++||||+++++++...+.+|+
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICM 80 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEE
Confidence 4578999999999999999999999999999999987542 23445678899999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
||||+++++|.+++... +.++...++.++.+++.+|.|||+ .+++|+||||+||+++.++.++|+|||++......
T Consensus 81 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 81 CMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 99999999999998764 458999999999999999999997 59999999999999999999999999987432110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH-
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ- 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~- 904 (1002)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 158 ----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~ 209 (284)
T cd06620 158 ----------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDD 209 (284)
T ss_pred ----------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhh
Confidence 012346899999999998888899999999999999999999999865432
Q ss_pred ----------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 905 ----------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 ----------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..+..+.............+..+.+|+.+||..||++||+ +.++++||||..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~e~~~~~~~~~ 271 (284)
T cd06620 210 DGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPT----PQQLCAMPPFIQ 271 (284)
T ss_pred hhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccc
Confidence 2233333322221112225678999999999999999999 999999999975
No 198
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.9e-36 Score=333.00 Aligned_cols=261 Identities=26% Similarity=0.391 Sum_probs=209.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
++|++++.||+|+||.||++.+..+|+.||+|.++.... ......+..|+.+ ++.++||||+++++++..++.+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 479999999999999999999999999999999876532 1223345556654 6677999999999999999999999
Q ss_pred EeccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|||+ .++|.+++... ....+++..++.++.||+.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhh-cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999 57888877642 235689999999999999999999997 9999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC----CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~----~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.......|+..|+|||++.+ ..++.++|+|||||++|+|++|+.||..
T Consensus 158 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 ----------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred ----------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 01122458889999999865 4467899999999999999999999965
Q ss_pred C-ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001865 901 K-TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 901 ~-~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
. ...+.+..+............++..+.+||.+||..+|.+||+ ++++++||||......
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~ 270 (283)
T cd06617 210 WKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPN----YPELLQHPFFELHLSK 270 (283)
T ss_pred cccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhhhcccc
Confidence 3 3334444444432221122246788999999999999999999 9999999999986543
No 199
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=361.31 Aligned_cols=259 Identities=28% Similarity=0.396 Sum_probs=214.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEE-Ee---
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS-FQ--- 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~-~~--- 739 (1002)
.+...+++|.+.|.+|||+.||+|.+...|..||+|.+-. .+....+.+.+|+++|++| +|+|||.+++. ..
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~ 109 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS 109 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc
Confidence 3556788999999999999999999988889999998753 3778889999999999999 59999999993 22
Q ss_pred e---CCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCcEEEecCCcEEEEe
Q 001865 740 T---KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 740 ~---~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g--IiHrDLKP~NILl~~~g~vkL~D 814 (1002)
. .-.++|+||||.||.|-+++..+....|++.+++.|+.|+++||++||... |||||||-+||||+.+|+.||||
T Consensus 110 ~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 110 SNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred CCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCc
Confidence 1 135789999999999999999765566999999999999999999999997 99999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccc---cCCCCCChhhHHHHHHHHHHH
Q 001865 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l---~~~~~~~~sDIwSlGvil~el 891 (1002)
||.|+..-.... ...+. .-........-|+.|+|||++ .+.+.+.|+|||+|||+||-|
T Consensus 190 FGSatt~~~~~~----~~~e~--------------~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 190 FGSATTKILSPT----SAQEV--------------NYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred ccccccccCCCc----cHHHH--------------HHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence 999854221110 00000 000111233569999999997 567889999999999999999
Q ss_pred HcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 892 LYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 892 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
++...||.+.-. -.|+.+.+.+|..+.++..+++||..||+.||.+||+.-++
T Consensus 252 Cy~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv 304 (738)
T KOG1989|consen 252 CYFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQV 304 (738)
T ss_pred HHhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHH
Confidence 999999987532 35678889999998999999999999999999999995443
No 200
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.6e-36 Score=328.30 Aligned_cols=249 Identities=22% Similarity=0.347 Sum_probs=210.7
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||++.+. ++..||+|.+.... .....+.+|+.+++.++|+||+++++++...+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 456789999999999999999999974 56679999876532 2356788999999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++.......++...+..++.||+.||+|||+++++|+||||+||+++.++.++|+|||++......
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999999998765567899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.. .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 157 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 210 (261)
T cd05072 157 EY--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210 (261)
T ss_pred ce--------------------------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence 00 01112345678999999988888999999999999999998 9999998877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
......+... ...+.....+..+.+|+.+||..+|++||++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 251 (261)
T cd05072 211 SDVMSALQRG-YRMPRMENCPDELYDIMKTCWKEKAEERPTF 251 (261)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCCcccCcCH
Confidence 7766666543 3444445578899999999999999999993
No 201
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.1e-36 Score=328.95 Aligned_cols=261 Identities=23% Similarity=0.386 Sum_probs=212.9
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC---hHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+|+..+.||+|+||.||++.+..+++.+|+|++....... ......+.+|+.+++.++|+||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4788899999999999999999999999999987543211 2245678899999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-cEEEEeccCCcccCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~~~ 825 (1002)
||||+.+++|.+++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||++.......
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999999764 4589999999999999999999999999999999999998776 59999999985543110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
. ..........|+..|+|||.+.+..++.++|+|||||++|+|++|..||.......
T Consensus 159 ~-----------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 215 (268)
T cd06630 159 T-----------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN 215 (268)
T ss_pred c-----------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc
Confidence 0 00011233568999999999988888999999999999999999999997544322
Q ss_pred HHH---HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 906 TFA---NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 906 ~~~---~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
... .+.............+..+.+++.+||..+|.+||+ +.++++||||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~ll~~~~~~ 268 (268)
T cd06630 216 HLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP----SRELLKHPVFR 268 (268)
T ss_pred hHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC----HHHHhcCcccC
Confidence 222 222222222222346788999999999999999999 99999999985
No 202
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.8e-36 Score=330.56 Aligned_cols=255 Identities=27% Similarity=0.470 Sum_probs=216.9
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|...+.||+|++|.||++.+..+++.+++|.+... .......+.+|+.+++.++||||+++++++...+..|+|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 466668899999999999999889999999988643 23344567889999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++.. ..++...+..++.||+.||+|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~----- 168 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE----- 168 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-----
Confidence 9999999999876 34899999999999999999999999999999999999999999999999987432210
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
........|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+....+..
T Consensus 169 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~ 226 (285)
T cd06648 169 ----------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR 226 (285)
T ss_pred ----------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence 0111234689999999999888899999999999999999999999988877766666
Q ss_pred HHhCCCCCC-CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 910 ILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 910 i~~~~~~~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+........ .....+..+.+|+.+||..+|++||+ +.++++||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~ 275 (285)
T cd06648 227 IRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT----AAELLNHPFLAKA 275 (285)
T ss_pred HHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcC----HHHHccCcccccC
Confidence 655432222 22236788999999999999999999 9999999999874
No 203
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.1e-36 Score=333.34 Aligned_cols=260 Identities=23% Similarity=0.365 Sum_probs=212.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999865422 2233456778999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+ +++|.+++.......+++..++.++.||+.||+|||++||+|+||+|+||+++. ++.+||+|||++.......
T Consensus 81 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-- 157 (294)
T PLN00009 81 EYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-- 157 (294)
T ss_pred ecc-cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--
Confidence 999 568888886655555789999999999999999999999999999999999985 5679999999985432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......|++.|+|||++.+. .++.++|||||||++|+|++|+.||...+....
T Consensus 158 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~ 212 (294)
T PLN00009 158 -------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE 212 (294)
T ss_pred -------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111234578899999998664 578899999999999999999999988776666
Q ss_pred HHHHHhCCC---------------------CCC------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 907 FANILHKDL---------------------KFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 907 ~~~i~~~~~---------------------~~~------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+..+..... .++ .....+..+.+|+.+||+.+|++||+ +.++++||||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~~l~~~~~~ 288 (294)
T PLN00009 213 LFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRIT----ARAALEHEYFK 288 (294)
T ss_pred HHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcC----HHHHhcCchHh
Confidence 555432100 000 01235778899999999999999999 99999999999
Q ss_pred CC
Q 001865 960 GV 961 (1002)
Q Consensus 960 ~~ 961 (1002)
.+
T Consensus 289 ~~ 290 (294)
T PLN00009 289 DL 290 (294)
T ss_pred HH
Confidence 75
No 204
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.1e-36 Score=341.79 Aligned_cols=261 Identities=24% Similarity=0.358 Sum_probs=208.7
Q ss_pred cccccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEE
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (1002)
|++..++|++++.||+|+||.||+|.+.. +++.||+|+++... .......+..|+.+++++ +|+||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 44566799999999999999999997543 45789999987532 233445678899999999 89999999998
Q ss_pred Eee-CCeEEEEEeccCCCchhHHHhhCCC---------------------------------------------------
Q 001865 738 FQT-KTHVCLITDYCPGGELFLLLDRQPT--------------------------------------------------- 765 (1002)
Q Consensus 738 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~~--------------------------------------------------- 765 (1002)
+.. +..++++|||+++++|.+++.....
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 764 5678999999999999999864321
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhh
Q 001865 766 --------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 837 (1002)
Q Consensus 766 --------~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~ 837 (1002)
..++...+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++..+......
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~---------- 229 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---------- 229 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch----------
Confidence 25789999999999999999999999999999999999999999999999998654211100
Q ss_pred cccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCC
Q 001865 838 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLK 916 (1002)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~ 916 (1002)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+.....
T Consensus 230 ---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~ 294 (337)
T cd05054 230 ---------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR 294 (337)
T ss_pred ---------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC
Confidence 01123356778999999999999999999999999999997 99999876554444444444333
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 917 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 917 ~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.......+..+.+++.+||+.+|++||+ +.++++|
T Consensus 295 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs----~~ell~~ 329 (337)
T cd05054 295 MRAPEYATPEIYSIMLDCWHNNPEDRPT----FSELVEI 329 (337)
T ss_pred CCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 3333456788999999999999999999 6666653
No 205
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.5e-36 Score=331.05 Aligned_cols=257 Identities=28% Similarity=0.388 Sum_probs=211.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeC-----
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK----- 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~----- 741 (1002)
.++|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 578999999999999999999999999999999986531 2235567889999988 899999999998753
Q ss_pred CeEEEEEeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001865 742 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
+..|+||||+++++|.+++.. .....+++..++.++.|++.||.|||+.||+|+||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 468999999999999998863 223568999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-----CCCChhhHHHHHHHHHHHHcC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-----~~~~~sDIwSlGvil~elltG 894 (1002)
...... .......|+..|+|||++... .++.++|||||||++|+|++|
T Consensus 177 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g 229 (291)
T cd06639 177 QLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229 (291)
T ss_pred hccccc---------------------------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence 432110 011234688999999998543 257899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 895 YTPFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+.||........+..+...... .......+..+.+||.+||+.+|++||+ +.+|++||||+
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~il~~~~~~ 291 (291)
T cd06639 230 DPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPS----VTHLLEHPFIK 291 (291)
T ss_pred CCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcC----HHHHhcCcccC
Confidence 9999887766666555544222 2222335678999999999999999999 99999999995
No 206
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.7e-36 Score=333.83 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=210.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|.+.+... .......+.+|+++++.++||||+++++++..++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 378999999999999999999998999999999875432 2234456788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|..+.... ..+++..++.++.||+.||+|||+.||+|+||+|+||++++++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07846 80 EFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 154 (286)
T ss_pred ecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence 999988888776543 348999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......++..|+|||++.+ ..++.++||||||+++|+|++|++||.+....+..
T Consensus 155 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 210 (286)
T cd07846 155 ------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL 210 (286)
T ss_pred ------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHH
Confidence 11123468899999999875 34678999999999999999999999876655444
Q ss_pred HHHHhC-------------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~-------------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+... ....+. .+.++..+.+|+.+||..+|++||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~~ 286 (286)
T cd07846 211 YHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS----SSQLLHHEFF 286 (286)
T ss_pred HHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh----HHHHhcCCCC
Confidence 433321 011111 1245778999999999999999999 9999999998
No 207
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.6e-36 Score=327.81 Aligned_cols=258 Identities=27% Similarity=0.428 Sum_probs=212.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC-------hHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------RNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~-------~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
+|.+.+.||.|+||.||++.+..+++.+|+|.++...... ......+..|+.+++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 5888999999999999999998899999999886432111 112356778999999999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+++||||+++++|.+++... ..++...++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999999765 458999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~--~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.... ........|+..|+|||++.... ++.++|+||||+++|++++|..||..
T Consensus 160 ~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 160 DIYD-------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred cccc-------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 1100 00122346889999999987654 78899999999999999999999976
Q ss_pred CChHHHHHHHHhCC--CCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 901 KTRQKTFANILHKD--LKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.........+.... ..++. ...++..+.+||.+||..+|++||+ ++++|+||||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~ 272 (272)
T cd06629 215 EEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT----ARELLQHPFI 272 (272)
T ss_pred cchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCC----HHHHhhCCCC
Confidence 66555444433222 12222 1245788999999999999999999 9999999997
No 208
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1e-35 Score=323.52 Aligned_cols=255 Identities=30% Similarity=0.453 Sum_probs=214.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+|+..+.||+|+||.||+|.+..++..|++|.+..... ........+.+|+.+++.++|+||+++++++......|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47888999999999999999988999999999875422 1234556788999999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ..+++..+..++.||+.||+|||++||+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 9999999999999764 358999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
......|++.|++||.+.... ++.++|+|||||++|+|++|..||........
T Consensus 157 --------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~ 210 (258)
T cd06632 157 --------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA 210 (258)
T ss_pred --------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence 112356889999999987766 88899999999999999999999987765555
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+.............+..+.+|+.+||..+|++||+ +.+++.|||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 258 (258)
T cd06632 211 VFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPT----AAELLEHPFV 258 (258)
T ss_pred HHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcC----HHHHhcCCCC
Confidence 54444322222223346788999999999999999999 9999999996
No 209
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=8.5e-36 Score=333.90 Aligned_cols=256 Identities=27% Similarity=0.384 Sum_probs=215.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|.+.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 46999999999999999999999899999999987554444555677889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+. ++|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~----- 167 (307)
T cd06607 95 EYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP----- 167 (307)
T ss_pred HhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-----
Confidence 9995 6777776543 24589999999999999999999999999999999999999999999999998854221
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....|++.|+|||++. ...++.++||||||+++|+|++|..||.+.+...
T Consensus 168 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~ 221 (307)
T cd06607 168 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (307)
T ss_pred --------------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH
Confidence 11346788999999984 3557889999999999999999999998877766
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
....+.............+..+.+||.+||..+|++||+ +.+++.||||...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 273 (307)
T cd06607 222 ALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPS----SEELLKHRFVLRE 273 (307)
T ss_pred HHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcC----HHHHhcChhhccc
Confidence 655554433222222335778999999999999999999 9999999999863
No 210
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7.8e-36 Score=328.97 Aligned_cols=257 Identities=28% Similarity=0.399 Sum_probs=217.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|+.++.||.|+||.||+|.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46889999999999999999999999999999987542 2345577889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06640 82 EYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......++..|+|||++.+..++.++|+|||||++|+|++|..||...+......
T Consensus 156 ------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06640 156 ------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF 211 (277)
T ss_pred ------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh
Confidence 01123468889999999988889999999999999999999999998877666555
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.+..... .......+..+.+|+.+||..+|++||+ +.++++||||....
T Consensus 212 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~ 260 (277)
T cd06640 212 LIPKNNP-PTLTGEFSKPFKEFIDACLNKDPSFRPT----AKELLKHKFIVKNA 260 (277)
T ss_pred hhhcCCC-CCCchhhhHHHHHHHHHHcccCcccCcC----HHHHHhChHhhhcc
Confidence 4433321 1122235678899999999999999999 99999999998643
No 211
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.8e-36 Score=333.91 Aligned_cols=257 Identities=27% Similarity=0.402 Sum_probs=216.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|+.++.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++..++.+|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 46888999999999999999998999999999987542 2334567889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999999999864 358999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||..........
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06642 156 ------------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF 211 (277)
T ss_pred ------------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh
Confidence 01123468899999999998888999999999999999999999998766555444
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.+...... ......+..+.+||.+||+.+|++||+ +.++++||||..+.
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~ 260 (277)
T cd06642 212 LIPKNSPP-TLEGQYSKPFKEFVEACLNKDPRFRPT----AKELLKHKFITRYT 260 (277)
T ss_pred hhhcCCCC-CCCcccCHHHHHHHHHHccCCcccCcC----HHHHHHhHHHHHHh
Confidence 43333221 112235778999999999999999999 99999999998643
No 212
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.2e-36 Score=331.08 Aligned_cols=257 Identities=26% Similarity=0.381 Sum_probs=209.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEe-----e
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----T 740 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~ 740 (1002)
..++|++++.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 3579999999999999999999999999999999876431 1234577899999999 7999999999873 4
Q ss_pred CCeEEEEEeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001865 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
++.+|+||||+++++|.+++.. .....+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 5679999999999999998753 22346899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----CCCCChhhHHHHHHHHHHHHc
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-----~~~~~~sDIwSlGvil~ellt 893 (1002)
....... .......|++.|+|||++.. ..++.++|||||||++|+|++
T Consensus 172 ~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 172 AQLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred eecccCC---------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 5432110 01123468999999999853 446789999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 894 GYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
|+.||........+..+.... .........+..+.+||.+||+.||++||+ +.++++|+||
T Consensus 225 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~~~~ 286 (286)
T cd06638 225 GDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPT----VSDLLQHVFI 286 (286)
T ss_pred CCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCC----HHHHhhcccC
Confidence 999998776555444433322 112222335678999999999999999999 9999999997
No 213
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.3e-36 Score=363.20 Aligned_cols=270 Identities=25% Similarity=0.336 Sum_probs=210.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|+++...........++.+|+.+++.++||||+++++++..++..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999999999999999998654444455667889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001865 749 DYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
||++|++|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 9999999999986421 1235667788999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
............ .. ................+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 162 ~i~~~~~~~~~l-------~~--~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~ 232 (932)
T PRK13184 162 FKKLEEEDLLDI-------DV--DERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232 (932)
T ss_pred eccccccccccc-------cc--ccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 652211100000 00 000000111122234679999999999999999999999999999999999999998
Q ss_pred CCChHHHHHHH-HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 900 GKTRQKTFANI-LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 900 ~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
........... .............+..+.+++.+||..||++|++..+
T Consensus 233 ~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~e 281 (932)
T PRK13184 233 RKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQ 281 (932)
T ss_pred CcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 76544333221 1111112222346788999999999999999998543
No 214
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.2e-36 Score=333.83 Aligned_cols=259 Identities=27% Similarity=0.407 Sum_probs=213.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+|++.+.||.|+||.||+|.+..+++.||+|.++..... .......+..|+.+++.++|+||+++++++...+..|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488899999999999999999999999999999865432 122334567899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.+|.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-- 156 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--
Confidence 9999 999999997643 369999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+....
T Consensus 157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~ 211 (298)
T cd07841 157 -------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ 211 (298)
T ss_pred -------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH
Confidence 01122356888999999865 4578899999999999999999988988776665
Q ss_pred HHHHHhCCCC-----CC---------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 907 FANILHKDLK-----FP---------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 907 ~~~i~~~~~~-----~~---------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+..+...... ++ .....+..+.+||.+||.++|++||| +.++++||||++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~e~l~~~~~~~ 287 (298)
T cd07841 212 LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT----ARQALEHPYFSN 287 (298)
T ss_pred HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC----HHHHhhCccccC
Confidence 5554331000 00 01224667889999999999999999 999999999997
Q ss_pred C
Q 001865 961 V 961 (1002)
Q Consensus 961 ~ 961 (1002)
.
T Consensus 288 ~ 288 (298)
T cd07841 288 D 288 (298)
T ss_pred C
Confidence 3
No 215
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-37 Score=347.07 Aligned_cols=253 Identities=25% Similarity=0.377 Sum_probs=215.7
Q ss_pred cccccccccCcEEEEEEEEcCCCeEEEEEEeecc-cccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC--eEEEEE
Q 001865 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG-VMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCLIT 748 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~-~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lV~ 748 (1002)
+....||+|+|-+||+|.|..+|..||--.++-. ....+....++..|+.+|+.|+||||+++|+++.+.. .+-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 4556799999999999999999988875544322 2345667789999999999999999999999998654 588999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--CcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~--gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~ 825 (1002)
|+|..|+|..|+++. +.++...++.|++||++||.|||++ -|||||||.+||||+. .|.|||+|+|+|..+..+
T Consensus 123 EL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred ecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 999999999999885 5599999999999999999999998 4999999999999984 589999999999765422
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~-~~~~ 904 (1002)
.....+|||.|||||++. ..|+..+||||||++++||+|+.+||.. .+..
T Consensus 200 ----------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 200 ----------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred ----------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 123478999999999987 6699999999999999999999999976 5667
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+|+++..+..+-.-..-..+++++||.+||.. ...|+| +.|||+||||..-
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~s----a~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLS----AKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccC----HHHHhhChhhccc
Confidence 888888777544333333578999999999998 899999 9999999999984
No 216
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=8.7e-36 Score=325.22 Aligned_cols=258 Identities=29% Similarity=0.480 Sum_probs=219.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|++|.||+|.+..+++.|++|.+..... ......+.+|+.++..++|+|++++++++...+..|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 368999999999999999999999999999999876532 245677889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+++++|.+++... ..+++..+..++.||+.||.|||+ +|++|+||+|+||+++.++.++|+|||++........
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~- 155 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD- 155 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-
Confidence 999999999999764 558999999999999999999999 9999999999999999999999999999855421110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---ChH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---TRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~---~~~ 904 (1002)
......++..|+|||.+.+..++.++|+||||+++|+|++|..||... ...
T Consensus 156 --------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~ 209 (264)
T cd06623 156 --------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF 209 (264)
T ss_pred --------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH
Confidence 112346889999999999888899999999999999999999999776 334
Q ss_pred HHHHHHHhCCCCCCCCCC-CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 905 KTFANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~-~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.....+..... ...... .+..+.++|.+||..+|++||+ +.++++||||+.++
T Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~ll~~~~~~~~~ 263 (264)
T cd06623 210 ELMQAICDGPP-PSLPAEEFSPEFRDFISACLQKDPKKRPS----AAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHHhcCCC-CCCCcccCCHHHHHHHHHHccCChhhCCC----HHHHHhCHHHHhcc
Confidence 44444443322 222233 6788999999999999999999 99999999998754
No 217
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-35 Score=330.09 Aligned_cols=269 Identities=44% Similarity=0.768 Sum_probs=218.5
Q ss_pred CccccccccccCcEEEEEEEEc---CCCeEEEEEEeecccccC-hHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
.|++.+.||.|+||.||+|.+. .+|..||+|+++...... ......+.+|+.+++.+ +|+||+.+++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999984 478999999997643222 23345677899999999 699999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||+|+|||++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999999764 45899999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~--~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. ........|+..|+|||.+.+. .++.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 212 (290)
T cd05613 159 E--------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212 (290)
T ss_pred c--------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC
Confidence 0 0111235689999999998753 46779999999999999999999996432
Q ss_pred ----hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhc
Q 001865 903 ----RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 903 ----~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
.......+......++ ...+..+.+|+.+||..||++||+.. ..+.+++.||||..++|+.+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (290)
T cd05613 213 EKNSQAEISRRILKSEPPYP--QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAA 281 (290)
T ss_pred ccccHHHHHHHhhccCCCCC--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHhh
Confidence 2333333333333333 34678899999999999999998432 3499999999999999998743
No 218
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-36 Score=362.05 Aligned_cols=268 Identities=24% Similarity=0.325 Sum_probs=200.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCC-eEEEEE--------------EeecccccChHHHHHHHHHHHHHHhCCCCCcc
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMK--------------AMDKGVMLNRNKVHRACAEREILDMLDHPFVP 732 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~avK--------------~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv 732 (1002)
.++|++++.||+|+||.||+|..+... ...+.| .+.+...........+.+|+.+|++++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 478999999999999999998764332 122222 11111111223445678999999999999999
Q ss_pred eeEEEEeeCCeEEEEEeccCCCchhHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc
Q 001865 733 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 733 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~ 809 (1002)
++++++...+..|+||+++ +++|..++.... ........++.++.||+.||.|||++|||||||||+|||++.+|.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 9999999999999999999 677877765421 122446778889999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001865 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
+||+|||++..+..... ......+||+.|+|||++.+..++.++|||||||++|
T Consensus 306 vkL~DFGla~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 306 IVLGDFGTAMPFEKERE--------------------------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred EEEEeCCCceecCcccc--------------------------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 99999999965431110 1122457999999999999999999999999999999
Q ss_pred HHHcCCCCCCCC---ChHHHHHHHHhCC----CCCC--------------------------CCCCCCHHHHHHHHHccc
Q 001865 890 EMLYGYTPFRGK---TRQKTFANILHKD----LKFP--------------------------SSTPTSLHAKQLMYRLLH 936 (1002)
Q Consensus 890 elltG~~Pf~~~---~~~~~~~~i~~~~----~~~~--------------------------~~~~~s~~~~~Ll~~~L~ 936 (1002)
+|++|..++.+. .....+..++... ..++ .....+..+.++|.+||+
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 999987654322 2222222222210 0011 011234567788999999
Q ss_pred cCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001865 937 RDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 937 ~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
+||.+||| +.|+|.||||.......+
T Consensus 440 ~DP~~Rps----a~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 440 FDWHLRPG----AAELLALPLFSAEEEEEI 465 (501)
T ss_pred cCcccCcC----HHHHhhChhhhcCCchHH
Confidence 99999999 999999999998765554
No 219
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.6e-36 Score=331.83 Aligned_cols=256 Identities=27% Similarity=0.459 Sum_probs=205.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++.+.||+|++|.||++.+..+++.||+|.+...... .....+.+|+++++.++|+||+++++++..++..|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 46899999999999999999999989999999998754221 1223456899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.+|.+||+|||++.......
T Consensus 82 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 82 FEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred EecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 99995 58999887643 358999999999999999999999999999999999999999999999999885321100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC-hHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQK 905 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~-~~~ 905 (1002)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.. ..+
T Consensus 158 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~ 212 (291)
T cd07844 158 -------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED 212 (291)
T ss_pred -------------------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 01122356889999999876 457889999999999999999999997665 223
Q ss_pred HHHHHHhC-------------------CCCCC---------CCCCCC--HHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 906 TFANILHK-------------------DLKFP---------SSTPTS--LHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 906 ~~~~i~~~-------------------~~~~~---------~~~~~s--~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
....+... ....+ .....+ ..+.+||.+||+.+|.+||| +.++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps----~~e~l~~ 288 (291)
T cd07844 213 QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS----AAEAMKH 288 (291)
T ss_pred HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC----HHHHhcC
Confidence 22222110 00000 001223 67889999999999999999 9999999
Q ss_pred CCc
Q 001865 956 PFF 958 (1002)
Q Consensus 956 p~f 958 (1002)
|||
T Consensus 289 ~~f 291 (291)
T cd07844 289 PYF 291 (291)
T ss_pred CCC
Confidence 998
No 220
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.6e-36 Score=340.71 Aligned_cols=289 Identities=25% Similarity=0.386 Sum_probs=222.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC-----Ce
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----TH 743 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~ 743 (1002)
.+|++.+.||.|+||.||++.+..+++.||||.+.... ........+.+|+.+++.++|+||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 58999999999999999999999999999999987542 2333455677899999999999999999988644 35
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+ +++|.+++... ..+++..++.++.||+.||.|||+++++|+||||+||+++.++.+||+|||++.....
T Consensus 84 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 89999999 57898888764 4599999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. .......|+..|+|||.+.. ..++.++|||||||++|+|++|+.||.+.+
T Consensus 161 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 213 (337)
T cd07858 161 KG---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD 213 (337)
T ss_pred Cc---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC
Confidence 10 01123467889999999865 458889999999999999999999998765
Q ss_pred hHHHHHHHHhC-----------------------CCCC------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 903 RQKTFANILHK-----------------------DLKF------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~~-----------------------~~~~------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
....+..+... .... ......+..+.+||.+||+.+|++||| +++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps----~~ell 289 (337)
T cd07858 214 YVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT----VEEAL 289 (337)
T ss_pred hHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC----HHHHH
Confidence 44333322210 0000 011346788899999999999999999 99999
Q ss_pred cCCCcCCCChhhhhccCCCCCCCCCCCCccccccccCCchhHhhhhhc
Q 001865 954 KHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQNV 1001 (1002)
Q Consensus 954 ~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1002)
+||||+.+.-.. ..|.-.+.+.-+++...=+..|+-+++
T Consensus 290 ~h~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (337)
T cd07858 290 AHPYLASLHDPS---------DEPVCQTPFSFDFEEDALTEEDIKELI 328 (337)
T ss_pred cCcchhhhcCcc---------cCccCCCccchhhhhhhcCHHHHHHHH
Confidence 999998752221 122233444444555444444555543
No 221
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.1e-36 Score=335.38 Aligned_cols=250 Identities=26% Similarity=0.428 Sum_probs=191.4
Q ss_pred ccccccCcEEEEEEEEcC--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe--eCCeEEEEEec
Q 001865 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLITDY 750 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~lV~E~ 750 (1002)
..||+|+||.||+|.+.. ++..||+|.+.... ....+.+|+.+++.++||||+++++++. .+..+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 56899999886532 2235678999999999999999999885 45688999999
Q ss_pred cCCCchhHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEE----ecCCcEEEEeccCCc
Q 001865 751 CPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 819 (1002)
Q Consensus 751 ~~ggsL~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl----~~~g~vkL~DFG~a~ 819 (1002)
+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 82 ~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 A-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred e-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 9 56888877521 12358899999999999999999999999999999999999 456789999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
....... .........||+.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus 161 ~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 161 LFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ccCCCcc------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 5432110 01112345789999999998764 5788999999999999999999999
Q ss_pred CCCChH---------HHHHHHHhC--------------CCCC----------------------CCCCCCCHHHHHHHHH
Q 001865 899 RGKTRQ---------KTFANILHK--------------DLKF----------------------PSSTPTSLHAKQLMYR 933 (1002)
Q Consensus 899 ~~~~~~---------~~~~~i~~~--------------~~~~----------------------~~~~~~s~~~~~Ll~~ 933 (1002)
...... ..+..+... ...+ ......+..+.+||.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 296 (317)
T cd07867 217 HCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQK 296 (317)
T ss_pred ccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHH
Confidence 753221 111111100 0000 0011234567899999
Q ss_pred ccccCcCCCCCChhcHHHHHcCCCc
Q 001865 934 LLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 934 ~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
||+.||.+||| +.|+|+||||
T Consensus 297 ~l~~dP~~R~t----~~e~l~hp~f 317 (317)
T cd07867 297 LLTMDPTKRIT----SEQALQDPYF 317 (317)
T ss_pred HhccCcccccC----HHHHhcCCCC
Confidence 99999999999 9999999998
No 222
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.8e-35 Score=322.85 Aligned_cols=259 Identities=29% Similarity=0.536 Sum_probs=215.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||+|+||.||++.+..+++.|++|.++.... .......+.+|+.+++.++|+||+++++++...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 58899999999999999999988999999999986532 24567888999999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 80 YCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred cCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 99999999999764 448899999999999999999999999999999999999999999999999986543221100
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC---CCChhhHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 905 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~---~~~~sDIwSlGvil~elltG~~Pf~~~~~~-~ 905 (1002)
........+++.|+|||++.+.. ++.++||||||+++|++++|+.||...... .
T Consensus 157 ----------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~ 214 (264)
T cd06626 157 ----------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ 214 (264)
T ss_pred ----------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH
Confidence 00012356889999999998766 788999999999999999999999765332 2
Q ss_pred HHHHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 906 TFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 906 ~~~~i~~-~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
....+.. ....++.....+..+.+||.+||+.+|.+||+ +.+++.|||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~i~~~~~~ 264 (264)
T cd06626 215 IMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT----ASELLQHPFV 264 (264)
T ss_pred HHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 2222222 22334444445888999999999999999999 9999999996
No 223
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8.5e-36 Score=324.12 Aligned_cols=256 Identities=27% Similarity=0.472 Sum_probs=217.9
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|.+.+.||.|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++|+||+++++.+...+..|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 58899999999999999999999999999999876432 22334567889999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc-EEEEeccCCcccCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-VSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~-vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+++++|.+++.......+++..+..++.||+.||.|||+++++|+||||+||+++.++. ++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 999999999998765556899999999999999999999999999999999999998864 6999999885432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+....+.
T Consensus 157 ------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 212 (257)
T cd08225 157 ------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL 212 (257)
T ss_pred ------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 01122358899999999988888999999999999999999999998877777666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+...... +.....+..+.++|.+||..+|++||| +.++++||||
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~~~~~ 257 (257)
T cd08225 213 KICQGYFA-PISPNFSRDLRSLISQLFKVSPRDRPS----ITSILKRPFL 257 (257)
T ss_pred HHhcccCC-CCCCCCCHHHHHHHHHHhccChhhCcC----HHHHhhCCCC
Confidence 66554332 223346778999999999999999999 9999999997
No 224
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.6e-36 Score=328.74 Aligned_cols=255 Identities=21% Similarity=0.309 Sum_probs=212.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..++|.+.+.||+|+||.||+|.+.. ++..||+|.++... .......+.+|+++++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 35689999999999999999998743 36789999987542 233456888999999999999999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc
Q 001865 742 THVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~ 809 (1002)
...|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 99999999999999999997532 235788999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001865 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
++|+|||++........ ........+++.|+|||++.+..++.++|||||||++|
T Consensus 161 ~kl~d~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred EEECCcccceecccCcc-------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence 99999999854321100 01112334678899999999999999999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 890 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 890 ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
+|++ |..||.+.+.......+..+....+ ....+..+.+|+.+||..||++||+ +.+++
T Consensus 216 e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil 275 (280)
T cd05049 216 EIFTYGKQPWYGLSNEEVIECITQGRLLQR-PRTCPSEVYDIMLGCWKRDPQQRIN----IKDIH 275 (280)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHcCCCcccCCC----HHHHH
Confidence 9998 9999998888877777776544332 2347889999999999999999999 56654
No 225
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9e-36 Score=331.29 Aligned_cols=258 Identities=22% Similarity=0.385 Sum_probs=208.4
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCe----
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH---- 743 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~---- 743 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .......+.+|+.+++.+ +||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 369999999999999999999999999999999875421 222335677899999999 46999999999887665
Q ss_pred -EEEEEeccCCCchhHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCC
Q 001865 744 -VCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLS 818 (1002)
Q Consensus 744 -~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a 818 (1002)
.|+||||++ ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccC-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 899999996 48888876532 245899999999999999999999999999999999999998 889999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
....... .......+++.|+|||++.+ ..++.++||||||+++|+|++|..|
T Consensus 159 ~~~~~~~---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 211 (295)
T cd07837 159 RAFSIPV---------------------------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211 (295)
T ss_pred eecCCCc---------------------------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence 5432110 01122357889999998865 4568899999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCC-----C------------CCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 898 FRGKTRQKTFANILHKDL-----K------------FPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~-----~------------~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
|.+.+.......+..... . .+. ....+..+.+||.+||.+||.+||+ +.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~----~~e 287 (295)
T cd07837 212 FPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS----AKA 287 (295)
T ss_pred CCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC----HHH
Confidence 998877666555443100 0 000 1235778999999999999999999 999
Q ss_pred HHcCCCcC
Q 001865 952 IKKHPFFK 959 (1002)
Q Consensus 952 lL~Hp~f~ 959 (1002)
++.||||+
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999985
No 226
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1e-35 Score=325.76 Aligned_cols=255 Identities=26% Similarity=0.377 Sum_probs=210.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|.++............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 58999999999999999999999999999999887644445556667889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+++++|.+++... ....+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~- 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence 999999999888642 23458999999999999999999999999999999999999999999999999885532110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 904 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--~ 904 (1002)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||..... .
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~ 214 (267)
T cd08228 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF 214 (267)
T ss_pred --------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence 011234688999999999888889999999999999999999999975432 3
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.....+.....+.......+..+.+||.+||..+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~vl~ 260 (267)
T cd08228 215 SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPD----IGYVHQ 260 (267)
T ss_pred HHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcC----HHHHHH
Confidence 3333333322221112235678999999999999999999 666654
No 227
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.5e-36 Score=328.79 Aligned_cols=256 Identities=27% Similarity=0.458 Sum_probs=213.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC---CCCcceeEEEEeeCCeEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~l 746 (1002)
.|++++.||.|+||.||+|.+..+++.||+|.++... .......+.+|+.+++.+. |||++++++++..+...|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5888999999999999999999999999999987542 2344567788999999986 9999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+++++|.+++... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 99999999999998653 58999999999999999999999999999999999999999999999999985543111
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.......|++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~ 209 (277)
T cd06917 156 --------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR 209 (277)
T ss_pred --------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 11223468999999999865 446889999999999999999999998876655
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
....+.....+.......+..+.+|+.+||..||++||+ +.++++||||+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~il~~~~~~~~ 261 (277)
T cd06917 210 AMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLS----AEELLKSKWIKAH 261 (277)
T ss_pred hhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcC----HHHHhhChHhhcc
Confidence 544333322111111126778999999999999999999 9999999999864
No 228
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=7.5e-36 Score=339.78 Aligned_cols=255 Identities=28% Similarity=0.435 Sum_probs=211.2
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-----
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
.++|++++.||+|+||.||++.+..++..||+|.+.+. .........+.+|+.+|+.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccc-ccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 46899999999999999999999999999999998653 223334456789999999999999999999987543
Q ss_pred -eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..|+||||+ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 468999999 8899888864 35899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. ......+++.|+|||++.+ ..++.++|+|||||++|+|++|..||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 169 DS------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cc------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 21 0123457889999999876 4578899999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 901 KTRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~-----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+.......+ .....+..+.++|.+||+.||.+||| +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t----~~~ 294 (343)
T cd07880 219 HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT----AAE 294 (343)
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC----HHH
Confidence 776555554433211100 01245677899999999999999999 999
Q ss_pred HHcCCCcCCC
Q 001865 952 IKKHPFFKGV 961 (1002)
Q Consensus 952 lL~Hp~f~~~ 961 (1002)
++.||||+.+
T Consensus 295 ~l~~~~~~~~ 304 (343)
T cd07880 295 ALAHPYFEEF 304 (343)
T ss_pred HhcCccHhhh
Confidence 9999999974
No 229
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6e-36 Score=329.44 Aligned_cols=279 Identities=37% Similarity=0.639 Sum_probs=227.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCeEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV 747 (1002)
++|.+.+.||.|+||.||++.+..++..||+|++.+...........+.+|+.+++++. ||||+++++++...+..|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 37999999999999999999999999999999998754444455677888999999998 99999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.+++|.+++... ..++...++.++.||+.||.|||++|++|+||+|+||+++.+|.++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999999999875 35999999999999999999999999999999999999999999999999998654322211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
....... . .................|+..|+|||++.+..++.++|+||||++++++++|..||........+
T Consensus 159 ~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 231 (280)
T cd05581 159 ESNKGDA-T------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231 (280)
T ss_pred ccCCCCC-c------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 0000000 0 00000011112334567899999999998888899999999999999999999999988777777
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+......++. ..+..+.+||.+||+.+|.+||++....+++|+||||
T Consensus 232 ~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 232 QKILKLEYSFPP--NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHhcCCCCCC--ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 776655444443 4578899999999999999999943333999999998
No 230
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.6e-35 Score=322.92 Aligned_cols=256 Identities=25% Similarity=0.474 Sum_probs=216.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe--eCCeEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~lV 747 (1002)
+|++++.||.|+||.||+|.+..++..+|+|.+..... .......+..|+.+++.++||||+++++++. .....|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58899999999999999999999999999999875432 3445567888999999999999999999775 45678999
Q ss_pred EeccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH-----~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
|||+++++|.+++... ....+++..++.++.||+.||.||| +.+++|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999998753 2356899999999999999999999 89999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
..... .......|++.|+|||++.+..++.++|+||||+++|+|++|+.||..
T Consensus 160 ~~~~~---------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 160 LGHDS---------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccCCc---------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 43111 001234689999999999888889999999999999999999999998
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+.......+..+... ......+..+.+|+.+||..+|++||+ +.++++|||+
T Consensus 213 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~il~~~~~ 265 (265)
T cd08217 213 RNQLQLASKIKEGKFR-RIPYRYSSELNEVIKSMLNVDPDKRPS----TEELLQLPLI 265 (265)
T ss_pred cCHHHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCCcccCCC----HHHHhhCCCC
Confidence 8766666666554332 222346788999999999999999999 9999999996
No 231
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.3e-36 Score=333.36 Aligned_cols=257 Identities=28% Similarity=0.464 Sum_probs=217.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|.....||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 45666778999999999999999899999999986542 223456788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|..++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 98 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~---- 170 (297)
T cd06659 98 EFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---- 170 (297)
T ss_pred ecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc----
Confidence 99999999998754 34899999999999999999999999999999999999999999999999988543211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
........|++.|+|||++.+..++.++|||||||++|+|++|+.||........+.
T Consensus 171 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 227 (297)
T cd06659 171 -----------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 227 (297)
T ss_pred -----------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123568999999999998889999999999999999999999998877766665
Q ss_pred HHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 909 NILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.+...... +......+..+.++|.+||+.+|.+||+ +.++++||||....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps----~~~ll~~~~~~~~~ 278 (297)
T cd06659 228 RLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERAT----AQELLDHPFLLQTG 278 (297)
T ss_pred HHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcC----HHHHhhChhhccCC
Confidence 55443222 2223346778999999999999999999 99999999999753
No 232
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.9e-35 Score=330.55 Aligned_cols=257 Identities=26% Similarity=0.374 Sum_probs=217.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-|...+.||+|+||.||+|.+..++..|++|.+.............+.+|+.+++.++|||++++++++......|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 47778889999999999999999999999999976544445556678889999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+ .++|.+++... ...+++..+..++.||+.+|.|||++||+|+||+|+||+++.++.++|+|||++....
T Consensus 102 ~~-~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------- 172 (313)
T cd06633 102 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------- 172 (313)
T ss_pred cC-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-------
Confidence 99 56788877653 3458999999999999999999999999999999999999999999999999873211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
......|+..|+|||++. ...++.++|||||||++|+|++|..||...+....
T Consensus 173 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~ 228 (313)
T cd06633 173 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 228 (313)
T ss_pred ------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 112346889999999984 35678899999999999999999999988877666
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
...+.............+..+.+|+.+||+++|.+||+ +.+++.||||+..+-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~----~~~~l~~~~~~~~~~ 281 (313)
T cd06633 229 LYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPA----SAELLRHDFVRRDRP 281 (313)
T ss_pred HHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCch
Confidence 66665544433333446678999999999999999999 999999999997543
No 233
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1e-35 Score=344.09 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=210.2
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEE
Q 001865 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYA 736 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~ 736 (1002)
.+.+..++|++++.||+|+||.||+|.+... +..||||+++... .......+.+|+.++++++ ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 3455678999999999999999999987433 3479999987542 2334567889999999996 999999999
Q ss_pred EEeeCCeEEEEEeccCCCchhHHHhhCC----------------------------------------------------
Q 001865 737 SFQTKTHVCLITDYCPGGELFLLLDRQP---------------------------------------------------- 764 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------- 764 (1002)
++...+.+|+|||||++|+|.+++..+.
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 9999999999999999999999886431
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcE
Q 001865 765 ------------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 765 ------------------------------------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NI 802 (1002)
...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 12478888999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001865 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 323 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSN-------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVW 323 (400)
T ss_pred EEeCCCEEEEEeCCcceecccccc-------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence 999999999999999865321110 0112234578899999999988899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001865 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
||||++|+|++ |..||........+..........+....++..+.+|+.+||..||++||++.+++
T Consensus 324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~ 391 (400)
T cd05105 324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLS 391 (400)
T ss_pred HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHH
Confidence 99999999996 99999876544444444444444444456788999999999999999999955533
No 234
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=9.6e-36 Score=326.63 Aligned_cols=248 Identities=31% Similarity=0.485 Sum_probs=201.0
Q ss_pred CCccccccc--cccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEE
Q 001865 669 QHFRPIKPL--GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 669 ~~y~i~~~L--G~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
+.|.+.+.+ |+|+||.||++.++.++..+|+|.+....... .|+.+...+ +||||++++++|..++..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 466776766 99999999999999999999999987542211 122233323 7999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-cEEEEeccCCcccCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~~ 824 (1002)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 999999999999999765 3699999999999999999999999999999999999999988 999999998854321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.....|++.|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 163 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 212 (267)
T PHA03390 163 ------------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE 212 (267)
T ss_pred ------------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 11235889999999999888999999999999999999999999865433
Q ss_pred HHH-HHHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 905 KTF-ANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 ~~~-~~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
... ..+... ....+.....+..+.+||.+||+.+|.+||+. ++++|+||||+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~~l~h~~~~~ 267 (267)
T PHA03390 213 ELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTN---YNEIIKHPFLKI 267 (267)
T ss_pred hhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCch---HHHHhcCCcccC
Confidence 221 111111 11222233578899999999999999999961 599999999974
No 235
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-35 Score=327.54 Aligned_cols=258 Identities=28% Similarity=0.458 Sum_probs=211.8
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--CCeEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCL 746 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~l 746 (1002)
++|...+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|++++++++||||++++++|.. .+.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 47889999999999999999999999999999987542 23455778899999999999999999998864 447899
Q ss_pred EEeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 747 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||+++++|.+++.. .....++...+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999988754 22355899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 901 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~--- 901 (1002)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 159 -----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (287)
T cd06621 159 -----------------------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP 209 (287)
T ss_pred -----------------------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence 011245788999999999888999999999999999999999999765
Q ss_pred --ChHHHHHHHHhCCC-CCCCC----CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 902 --TRQKTFANILHKDL-KFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 902 --~~~~~~~~i~~~~~-~~~~~----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
...+....+..... ..+.. ...+..+.+||.+||..+|++||| +.|+++||||+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~ 272 (287)
T cd06621 210 PLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPT----PWDMLEHPWIKAQ 272 (287)
T ss_pred CCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCC----HHHHHhCcccccc
Confidence 22333333333211 11111 123567899999999999999999 9999999999874
No 236
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.1e-36 Score=333.42 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=216.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|.+++.||+|+||.||++.+..++..||+|.+... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 36899999999999999999999889999999998643 223346778899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
+||+++++|.+++... .++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-- 169 (293)
T cd06647 95 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (293)
T ss_pred EecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc--
Confidence 9999999999998753 47899999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......|++.|+|||.+.+..++.++|+|||||++|++++|+.||...+....+
T Consensus 170 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~ 224 (293)
T cd06647 170 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224 (293)
T ss_pred -------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe
Confidence 0112346889999999998888899999999999999999999999876654443
Q ss_pred HHHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 908 ANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 908 ~~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+... ...+......+..+.+|+.+||..+|++||+ +.+++.||||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~h~~~~~~ 275 (293)
T cd06647 225 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKIA 275 (293)
T ss_pred eehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhcC
Confidence 333322 2223333345678999999999999999999 9999999999874
No 237
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.3e-35 Score=327.16 Aligned_cols=257 Identities=18% Similarity=0.232 Sum_probs=209.6
Q ss_pred cccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
+..++|++.+.||+|+||.||++.+.. ++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 456789999999999999999998742 35689999886432 22344568899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEE
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL 812 (1002)
+...++||||+++++|.+++.... ...++...+..++.|++.||.|||++|++|+||||+||+++.++.++|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999999987532 123677889999999999999999999999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH
Q 001865 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ell 892 (1002)
+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 161 ~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 161 GDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCCCCccccCCcce-------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 99999854321100 00111234678899999999888999999999999999999
Q ss_pred c-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 893 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 893 t-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+ |..||.+.+.......+...... +....++..+.+|+.+||+.||++||+ +.++++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~ 273 (277)
T cd05062 216 TLAEQPYQGMSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIIS 273 (277)
T ss_pred cCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 8 79999988877777666654432 223346788999999999999999999 666654
No 238
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.4e-35 Score=328.72 Aligned_cols=272 Identities=42% Similarity=0.737 Sum_probs=219.8
Q ss_pred CccccccccccCcEEEEEEEEc---CCCeEEEEEEeecccccC-hHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~~avK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
+|++.+.||.|+||.||++.+. .++..||+|++++..... ......+.+|+.++.++ +||||+++++++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4888999999999999999864 457899999987543222 23345677899999999 699999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.+++|.+++... ..+++..++.++.|++.+|.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998754 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~--~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. ........|++.|+|||.+.+.. .+.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 159 E--------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred c--------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 0 01112346899999999987654 6789999999999999999999996432
Q ss_pred ----hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCC
Q 001865 903 ----RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 903 ----~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
..+....+....... ....+..+.+||.+||+.+|++|||+.+ +.++|+||||+.+.|+.+...+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~R~t~~~-~~~~l~~~~~~~~~~~~~~~~~~~ 283 (288)
T cd05583 213 EQNSQSEISRRILKSKPPF--PKTMSAEARDFIQKLLEKDPKKRLGANG-ADEIKNHPFFQGIDWDDLAAKRIP 283 (288)
T ss_pred ccchHHHHHHHHHccCCCC--CcccCHHHHHHHHHHhcCCHhhccCcch-HHHHhcCcccccCCHHHHhhhccC
Confidence 223333333333332 3346788999999999999999999543 678999999999999888665554
No 239
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.7e-35 Score=328.58 Aligned_cols=256 Identities=28% Similarity=0.410 Sum_probs=203.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++|+||+++++++..++..|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875422 12223567899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+ +++|.+++.... ..++...++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 157 (291)
T cd07870 82 FEYM-HTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-- 157 (291)
T ss_pred Eecc-cCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC--
Confidence 9999 577777765443 347888999999999999999999999999999999999999999999999985422110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 905 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~-~ 905 (1002)
.......+++.|+|||++.+. .++.++|||||||++|+|++|..||.+.... +
T Consensus 158 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~ 212 (291)
T cd07870 158 -------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE 212 (291)
T ss_pred -------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH
Confidence 111233578999999998764 4788999999999999999999999765432 2
Q ss_pred HHHHHHhC-C-------------CC-----C----C-------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 906 TFANILHK-D-------------LK-----F----P-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 906 ~~~~i~~~-~-------------~~-----~----~-------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.+..+... . .. + + .....+..+.+|+.+||..||.+||| +.+++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t----~~~~l~h 288 (291)
T cd07870 213 QLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS----AQDALLH 288 (291)
T ss_pred HHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC----HHHHhcC
Confidence 22222110 0 00 0 0 00113567889999999999999999 9999999
Q ss_pred CCc
Q 001865 956 PFF 958 (1002)
Q Consensus 956 p~f 958 (1002)
|||
T Consensus 289 ~~~ 291 (291)
T cd07870 289 PYF 291 (291)
T ss_pred CCC
Confidence 998
No 240
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-35 Score=322.48 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=208.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+.++|++.+.||+|+||.||++.++. +..+|+|.+.... .....+.+|+.+++.++||||+++++++...+.+|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGA----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCC----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEE
Confidence 34679999999999999999998854 5679999876542 123567889999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+++++|.+++.... ..+++..+..++.|++.||+|||++||+|+||||+||+++.++.+||+|||.+.......
T Consensus 77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~- 154 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE- 154 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCc-
Confidence 999999999999987543 358999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~ 905 (1002)
........++..|+|||++.+..++.++||||||+++|+|++ |+.||...+..+
T Consensus 155 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~ 209 (256)
T cd05114 155 -------------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE 209 (256)
T ss_pred -------------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 001112235678999999988889999999999999999999 999999888887
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.+..+..+... ......+..+.+|+.+||..+|++||+ +.++++
T Consensus 210 ~~~~i~~~~~~-~~~~~~~~~~~~li~~c~~~~p~~Rps----~~~l~~ 253 (256)
T cd05114 210 VVEMISRGFRL-YRPKLASMTVYEVMYSCWHEKPEGRPT----FAELLR 253 (256)
T ss_pred HHHHHHCCCCC-CCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 77777665322 223345778999999999999999999 666653
No 241
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.2e-35 Score=328.15 Aligned_cols=255 Identities=25% Similarity=0.419 Sum_probs=210.5
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|++.+.||.|++|.||++.+..+|..||+|++..... .......+.+|+.+++.++|||++++++++..++..|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999875422 222335677899999999999999999999999999999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+ +++|.+++.......+++..+..++.||+.||+|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~----- 153 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV----- 153 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-----
Confidence 9 5799999877654568999999999999999999999999999999999999999999999999985432110
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......+++.|+|||++.+. .++.++||||||+++|+|++|++||...+.......
T Consensus 154 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 211 (283)
T cd07835 154 ----------------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR 211 (283)
T ss_pred ----------------------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011223568899999988664 468899999999999999999999988776555444
Q ss_pred HHhCCC------------------CCC---------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 910 ILHKDL------------------KFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~------------------~~~---------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+.+... .++ .....+..+.+||.+||+.+|.+||+ +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~ 283 (283)
T cd07835 212 IFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS----AKAALQHPYF 283 (283)
T ss_pred HHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC----HHHHhcCCCC
Confidence 433100 000 11335678899999999999999999 9999999998
No 242
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=9.6e-36 Score=324.81 Aligned_cols=251 Identities=24% Similarity=0.320 Sum_probs=213.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..+|++++.||.|+||.||+|.+.. +..+++|++... .......+..|+.+++.++||||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD---DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc---chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 4579999999999999999999977 889999998754 233456788899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++.......++...++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 999999999999987656678999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
.......++..|+|||++.+..++.++||||||+++|+|++ |+.||.+.+..+.
T Consensus 159 -------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~ 213 (261)
T cd05148 159 -------------------------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV 213 (261)
T ss_pred -------------------------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 00112346778999999988889999999999999999998 8999998887777
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
+..+... ...+....++..+.+++.+||+.||.+|||+.++++
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 214 YDQITAG-YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHhC-CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 7766643 344445567889999999999999999999544433
No 243
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.3e-35 Score=324.84 Aligned_cols=253 Identities=28% Similarity=0.399 Sum_probs=209.0
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||++.+..+++.+|||.+.............+.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999887644444455677889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+++++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 999999999988642 23468999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 904 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--~ 904 (1002)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||.+... .
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence 011234688999999999888899999999999999999999999976533 2
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.....+.............+..+.+|+.+||..||++|||+.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 258 (267)
T cd08229 215 SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYV 258 (267)
T ss_pred HHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHH
Confidence 33333333222222223467889999999999999999995443
No 244
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.8e-35 Score=326.32 Aligned_cols=251 Identities=27% Similarity=0.468 Sum_probs=203.5
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeC--CeEEEE
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THVCLI 747 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~--~~~~lV 747 (1002)
|++++.||+|+||.||++.+..+++.||+|.+++... .... ....+|+.++.++ +|+||+++++++.++ +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999876422 2222 2345788888888 599999999999987 899999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+.+.... ..+++..++.++.||+.||+|||++||+|+||||+||+++. +.+||+|||++.......
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-- 153 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-- 153 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC--
Confidence 99995 68888876542 45899999999999999999999999999999999999999 999999999985432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
......+++.|+|||++.. ..++.++|||||||++|+|++|..||.+.+..+.
T Consensus 154 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~ 207 (282)
T cd07831 154 --------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207 (282)
T ss_pred --------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence 1122457889999998654 4568899999999999999999999988776655
Q ss_pred HHHHHhC------------------CCCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~------------------~~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+... ...++. ....+..+.+||.+||.++|++||+ +.++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~~~~ 282 (282)
T cd07831 208 IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT----AKQALRHPYF 282 (282)
T ss_pred HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC----HHHHhhCCCC
Confidence 5444321 111111 1235788999999999999999999 9999999998
No 245
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1e-35 Score=334.07 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=205.4
Q ss_pred CccccccccccCcEEEEEEEEcC--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--CeEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~ 745 (1002)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.............+.+|+.+++.++||||+++++++... +.+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58899999999999999999988 8999999999874322333446678899999999999999999999988 8899
Q ss_pred EEEeccCCCchhHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec----CCcEEEEeccCC
Q 001865 746 LITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLS 818 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~----~g~vkL~DFG~a 818 (1002)
+||||++ ++|.+++... ....+++..++.++.||+.||.|||+++|+||||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 5777766532 1236899999999999999999999999999999999999999 899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~P 897 (1002)
......... ........+++.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 160 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 160 RLFNAPLKP------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred cccCCCccc------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 654321110 1112345689999999988764 578899999999999999999999
Q ss_pred CCCCChHH---------HHHHHHh--------------------------CCCCCCC---------CCCCCHHHHHHHHH
Q 001865 898 FRGKTRQK---------TFANILH--------------------------KDLKFPS---------STPTSLHAKQLMYR 933 (1002)
Q Consensus 898 f~~~~~~~---------~~~~i~~--------------------------~~~~~~~---------~~~~s~~~~~Ll~~ 933 (1002)
|.+..... .+..+.. ....++. ....+..+.++|.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 295 (316)
T cd07842 216 FKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK 295 (316)
T ss_pred CcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHH
Confidence 97654321 1111110 0001110 01356678899999
Q ss_pred ccccCcCCCCCChhcHHHHHcCCCc
Q 001865 934 LLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 934 ~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
||+.||++||| +.++++||||
T Consensus 296 ~l~~~P~~Rps----~~eil~~~~f 316 (316)
T cd07842 296 LLEYDPTKRIT----AEEALEHPYF 316 (316)
T ss_pred HhcCCcccCcC----HHHHhcCCCC
Confidence 99999999999 9999999998
No 246
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.8e-35 Score=322.86 Aligned_cols=250 Identities=25% Similarity=0.344 Sum_probs=209.5
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|++|.||++.+. +++.||+|.++.... ....+.+|+.++++++||||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 45678999999999999999999974 457899999875422 2456788999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++.......++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999987655568999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
. .......++..|+|||++.+..++.++||||||+++|+|++ |+.||.+.+..
T Consensus 158 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 211 (261)
T cd05068 158 Y--------------------------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA 211 (261)
T ss_pred c--------------------------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 0 00111223468999999998889999999999999999998 99999988877
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.....+... ...+.....+..+.+|+.+||+.+|.+||++.+
T Consensus 212 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 253 (261)
T cd05068 212 EVLQQVDQG-YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFET 253 (261)
T ss_pred HHHHHHHcC-CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 777666543 333444557889999999999999999999443
No 247
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.2e-35 Score=327.44 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=210.5
Q ss_pred cccCCccccccccccCcEEEEEEEE-----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
|+.++|.+.+.||+|+||.||++.+ ..++..+|+|.+... .......+.+|+.++++++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 4567899999999999999999986 234567999988653 34456678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~-----------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~ 809 (1002)
.+.+|+||||+++++|.+++.... ...+++..++.++.||+.||+|||++|++||||||+|||++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999987432 124899999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHH
Q 001865 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
++|+|||++........ ........+++.|+|||++.+..++.++|||||||++|
T Consensus 159 ~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~ 213 (288)
T cd05093 159 VKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 213 (288)
T ss_pred EEeccCCccccccCCce-------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 99999999864321100 01112234678899999999888999999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 890 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 890 ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+|++ |..||...........+..+.... .....+..+.+|+.+||+.||.+|||+.+
T Consensus 214 ~l~t~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 271 (288)
T cd05093 214 EIFTYGKQPWYQLSNNEVIECITQGRVLQ-RPRTCPKEVYDLMLGCWQREPHMRLNIKE 271 (288)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9998 999999888877777777654322 22346788999999999999999999443
No 248
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.3e-35 Score=328.53 Aligned_cols=257 Identities=29% Similarity=0.465 Sum_probs=211.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ........+.+|+++++.++|+||+++++++..++..|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 37999999999999999999999999999999987542 23344567889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++++.|..+.... ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 80 EYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 999877666655443 4489999999999999999999999999999999999999999999999999855432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||.+.......
T Consensus 156 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 211 (288)
T cd07833 156 ------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL 211 (288)
T ss_pred ------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 012235688999999999888 7889999999999999999999999877655444
Q ss_pred HHHHhC-------------------CCCCCC-----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001865 908 ANILHK-------------------DLKFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 908 ~~i~~~-------------------~~~~~~-----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
..+... ...++. ...++..+.+||++||..+|++||+ ++++++|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~ 287 (288)
T cd07833 212 YLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT----CDELLQHPY 287 (288)
T ss_pred HHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc----HHHHhcCCC
Confidence 333210 000000 1123678999999999999999999 999999999
Q ss_pred c
Q 001865 958 F 958 (1002)
Q Consensus 958 f 958 (1002)
|
T Consensus 288 f 288 (288)
T cd07833 288 F 288 (288)
T ss_pred C
Confidence 8
No 249
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.4e-35 Score=329.77 Aligned_cols=257 Identities=24% Similarity=0.367 Sum_probs=210.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--CeEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~ 745 (1002)
.++|++.+.||.|+||.||+|.+..+++.+|+|.++..... ......+.+|+.++++++||||+++++++... +..|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 45899999999999999999999999999999999754322 22334567899999999999999999998877 8999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999995 69999887643 358999999999999999999999999999999999999999999999999886543110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......+++.|+|||.+.+.. ++.++||||||+++|+|++|..||...+..
T Consensus 161 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~ 213 (293)
T cd07843 161 ---------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213 (293)
T ss_pred ---------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 1112345788999999987643 578999999999999999999999887766
Q ss_pred HHHHHHHhCCC-------------------CC---------CCCCC--CCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 905 KTFANILHKDL-------------------KF---------PSSTP--TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 905 ~~~~~i~~~~~-------------------~~---------~~~~~--~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..+..+..... .+ ..... .+..+.+||++||+.+|++||| +.|+|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t----~~ell~ 289 (293)
T cd07843 214 DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS----AEDALK 289 (293)
T ss_pred HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC----HHHHhc
Confidence 65554432100 00 00111 3777899999999999999999 999999
Q ss_pred CCCc
Q 001865 955 HPFF 958 (1002)
Q Consensus 955 Hp~f 958 (1002)
||||
T Consensus 290 ~~~f 293 (293)
T cd07843 290 HPYF 293 (293)
T ss_pred CCCC
Confidence 9998
No 250
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.3e-36 Score=330.52 Aligned_cols=262 Identities=24% Similarity=0.357 Sum_probs=209.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCeEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~l 746 (1002)
.++|...+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.++.++. |+||+++++++..++..++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3578888999999999999999999999999999875432 244567788999999985 9999999999999999999
Q ss_pred EEeccCCCchhHHHh---hCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 747 ITDYCPGGELFLLLD---RQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~---~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
+|||+ +++|.++.. ......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 81 ~~e~~-~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEecc-cCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 99999 556655432 22335699999999999999999999975 99999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~---~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
.. .......|++.|+|||++.+. .++.++|||||||++|+|++|+.||.
T Consensus 160 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 160 DS----------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cC----------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 11 011233588899999999776 68889999999999999999999997
Q ss_pred CCCh-HHHHHHHHhCCC-CCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001865 900 GKTR-QKTFANILHKDL-KFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 900 ~~~~-~~~~~~i~~~~~-~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
.... .+.+..+..... ..+ .....+..+.+||.+||..+|++||| ++++++||||+...+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~i~~~~~~~~~~~~ 276 (288)
T cd06616 212 KWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK----YKELLEHPFIKDYEER 276 (288)
T ss_pred hcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcChhhhchhhc
Confidence 6542 222223322221 111 12246788999999999999999999 9999999999875433
No 251
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=342.03 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=226.8
Q ss_pred ccccccccCCccccccccccCcEEEEEEEEcCCCe---E-EEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEE
Q 001865 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---Y-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 736 (1002)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~-~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 736 (1002)
...|++..++-.+.+.||+|+||.||++..+..+. . ||+|..+............+.+|+++|++++|||||++||
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 45577888888889999999999999999865422 3 8999988655556788899999999999999999999999
Q ss_pred EEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001865 737 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
+......+|+|||+|.||+|.++|++.+. .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccc
Confidence 99999999999999999999999998753 69999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccccccc-ccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-C
Q 001865 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 894 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G 894 (1002)
+++..... .... ..--...|+|||.+....|+.++|||||||++||+++ |
T Consensus 308 Ls~~~~~~----------------------------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g 359 (474)
T KOG0194|consen 308 LSRAGSQY----------------------------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG 359 (474)
T ss_pred cccCCcce----------------------------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccC
Confidence 98553200 0000 1124568999999999999999999999999999997 8
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 895 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
..||.+....+....+.......+.+...+..+..++.+|+..+|+.||++.++++.
T Consensus 360 ~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 360 AEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred CCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 999999999999999977777666666778889999999999999999998765443
No 252
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.9e-35 Score=319.33 Aligned_cols=256 Identities=31% Similarity=0.538 Sum_probs=221.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||++.+..++..|++|++..... .......+.+|+++++.++|||++++++.+...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58899999999999999999988999999999876432 34556678899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 750 YCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|+++++|.+++.... ...++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 999999999997643 3669999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~ 212 (258)
T cd08215 158 -------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELA 212 (258)
T ss_pred -------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 1122346899999999998888899999999999999999999999888777766
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+....... .....+..+.+++.+||..+|++||+ +.++|+||||
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 258 (258)
T cd08215 213 LKILKGQYPP-IPSQYSSELRNLVSSLLQKDPEERPS----IAQILQSPFI 258 (258)
T ss_pred HHHhcCCCCC-CCCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCCCC
Confidence 6666544322 22356788999999999999999999 9999999997
No 253
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=9.9e-36 Score=337.83 Aligned_cols=260 Identities=25% Similarity=0.417 Sum_probs=208.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC-----C
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (1002)
.++|++.+.||+|+||.||++.+..+|+.||+|+++.. ........+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 36899999999999999999999999999999998642 2233456678899999999999999999887643 3
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 82 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 DVYIVQELM-ETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred eEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 589999999 5688887754 358999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.... .........|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 158 ~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~ 213 (336)
T cd07849 158 PEHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK 213 (336)
T ss_pred cccc------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1110 0011123578999999998754 46788999999999999999999999876
Q ss_pred ChHHHHHHHHhC----------------------CCCCC-------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 902 TRQKTFANILHK----------------------DLKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~~~~~~~~i~~~----------------------~~~~~-------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+.......+... ..... .....+..+.+||.+||+.+|++||| +.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~e~ 289 (336)
T cd07849 214 DYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT----VEEA 289 (336)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC----HHHH
Confidence 544333322110 00000 01234667899999999999999999 9999
Q ss_pred HcCCCcCCC
Q 001865 953 KKHPFFKGV 961 (1002)
Q Consensus 953 L~Hp~f~~~ 961 (1002)
++||||+.+
T Consensus 290 l~hp~~~~~ 298 (336)
T cd07849 290 LAHPYLEQY 298 (336)
T ss_pred hcCcccccc
Confidence 999999975
No 254
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.8e-35 Score=326.89 Aligned_cols=255 Identities=24% Similarity=0.422 Sum_probs=209.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||.|++|.||+|.+..+|..||+|+++.... ......+.+|+.+++.++|+||+++++++...+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 48899999999999999999999999999999976432 2233556789999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 750 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+. ++|.+++.... ...+++..+..++.||+.||.|||++|++|+||||+||++++++.++|+|||++......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~---- 153 (284)
T cd07836 79 YMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP---- 153 (284)
T ss_pred cCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC----
Confidence 996 58888876532 245899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
........+++.|++||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 210 (284)
T cd07836 154 -----------------------VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL 210 (284)
T ss_pred -----------------------ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 0111234578899999998664 4688999999999999999999999987766665
Q ss_pred HHHHhCCC------------------CCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHKDL------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~------------------~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+..... ..+. .+..+..+.++|.+||+.||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~f 284 (284)
T cd07836 211 LKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS----AHDALQHPWF 284 (284)
T ss_pred HHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 55432100 0000 0134667889999999999999999 9999999998
No 255
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.6e-35 Score=333.08 Aligned_cols=255 Identities=24% Similarity=0.322 Sum_probs=207.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+...+|++.+.||+|+||.||+|.+..++. .||+|+++.. ........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 345689999999999999999999866655 4899998643 2334456788999999999999999999988764
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..++|++|+.+|+|.+++.... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 5789999999999999997643 35889999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 160 GADEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cCCCcc-------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 321110 01112235678999999999999999999999999999997 9999988
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001865 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
....+. ..+......++....++..+.+++.+||..+|++||++.+++.
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 215 IPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred CCHHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 766554 3455554555555567888999999999999999999554433
No 256
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.1e-35 Score=329.96 Aligned_cols=255 Identities=26% Similarity=0.389 Sum_probs=218.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|...+.||+|+||.||++.+..++..+|+|.+.............+.+|+.+++.++|||++++++++..++..|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 35899999999999999999999999999999987654444455667889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+. |+|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 105 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----- 177 (317)
T cd06635 105 EYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----- 177 (317)
T ss_pred eCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence 9995 5787777543 34589999999999999999999999999999999999999999999999998743221
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....|++.|+|||++. ...++.++|||||||++|+|++|+.||.......
T Consensus 178 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 231 (317)
T cd06635 178 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 231 (317)
T ss_pred --------------------------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 12346888999999974 3567889999999999999999999998887777
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
....+.............+..+.+||.+||+.+|.+||+ +.++++|+|+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~ 282 (317)
T cd06635 232 ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPT----SEELLKHMFVLR 282 (317)
T ss_pred HHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcC----HHHHHhChhhhc
Confidence 777776655444444456788999999999999999999 999999999975
No 257
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.4e-35 Score=325.06 Aligned_cols=254 Identities=28% Similarity=0.420 Sum_probs=216.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-|++++.||.|+||.||++.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 5888999999999999999998899999999886432 23345678899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|..++.. ..++...+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06641 83 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch----
Confidence 9999999999864 348999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........
T Consensus 156 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 212 (277)
T cd06641 156 -----------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212 (277)
T ss_pred -----------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence 011234688899999999888888999999999999999999999988776666555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.....+ ......+..+.+++.+||+.+|.+||+ +.++++||||..
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~~~ 258 (277)
T cd06641 213 IPKNNPP-TLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFIVR 258 (277)
T ss_pred HhcCCCC-CCCcccCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhh
Confidence 5443222 122346788999999999999999999 999999999986
No 258
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.1e-35 Score=330.58 Aligned_cols=261 Identities=25% Similarity=0.360 Sum_probs=205.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-----
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 4689999999999999999999999999999999865422 1222334567999999999999999999886543
Q ss_pred ---eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001865 743 ---HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 743 ---~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 90 YKGSFYLVFEFC-EHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCceEEEEEcCC-CcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 469999999 568888876542 358999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.+...... .........++..|+|||.+.+. .++.++||||||+++|+|++|+.||
T Consensus 168 ~~~~~~~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 168 AFSLSKNS-----------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cccCCccc-----------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 54321110 00112234678999999998764 3678999999999999999999999
Q ss_pred CCCChHHHHHHHHh--CCC-----------------CCCC-----------CCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 899 RGKTRQKTFANILH--KDL-----------------KFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~--~~~-----------------~~~~-----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.+.+.......+.. +.+ ..+. ....+..+.+||.+||..||.+|||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t---- 300 (310)
T cd07865 225 QGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID---- 300 (310)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC----
Confidence 88766544333322 100 0010 0112456789999999999999999
Q ss_pred HHHHHcCCCc
Q 001865 949 ANEIKKHPFF 958 (1002)
Q Consensus 949 a~elL~Hp~f 958 (1002)
++++|+||||
T Consensus 301 ~~e~l~h~~f 310 (310)
T cd07865 301 ADTALNHDFF 310 (310)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 259
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-35 Score=325.15 Aligned_cols=258 Identities=19% Similarity=0.248 Sum_probs=212.0
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+..++|++.+.||+|+||.||++.+... +..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 45677999999999999999999998644 3789999986542 2334456788999999999999999999999
Q ss_pred eCCeEEEEEeccCCCchhHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEE
Q 001865 740 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
.....|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+|||++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 9999999999999999999987532 12478889999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001865 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 214 (277)
T cd05032 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214 (277)
T ss_pred ECCcccchhhccCcc-------------------------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHh
Confidence 999999864321110 0111234567899999999888899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 892 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++ |..||.+.+.......+.... ..+.....+..+.+|+.+||+.+|++||| +.++++
T Consensus 215 ~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~~ 273 (277)
T cd05032 215 ATLAEQPYQGLSNEEVLKFVIDGG-HLDLPENCPDKLLELMRMCWQYNPKMRPT----FLEIVS 273 (277)
T ss_pred hccCCCCCccCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 98 999999888777766665332 23333446889999999999999999999 666553
No 260
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.3e-35 Score=322.50 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=205.6
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|+||.||+|.+..+ ..+|+|.++.... ....+.+|+.+++.++||||+++++.+.. +..|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcE
Confidence 4567899999999999999999998665 4599999875321 23567889999999999999999998754 5689
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||.+.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999999986545568999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
. .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 157 ~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 157 Y--------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred c--------------------------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 0 01112346778999999988889999999999999999999 89999888777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
..+..+... ...+.....+..+.+|+.+||+.+|++||++.
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~ 251 (262)
T cd05071 211 EVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPTFE 251 (262)
T ss_pred HHHHHHhcC-CCCCCccccCHHHHHHHHHHccCCcccCCCHH
Confidence 766665543 23344445788899999999999999999943
No 261
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.5e-35 Score=335.22 Aligned_cols=262 Identities=23% Similarity=0.320 Sum_probs=206.9
Q ss_pred cccccc--CcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccC
Q 001865 675 KPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G--~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
..||.| +||+||++.+..+|+.||+|++..... .......+.+|+.+++.++||||++++++|..++..|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 456666 999999999999999999999875432 23445778889999999999999999999999999999999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcc
Q 001865 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
+++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~----- 157 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK----- 157 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc-----
Confidence 999999998754456899999999999999999999999999999999999999999999999865332110000
Q ss_pred hhhhhcccCCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001865 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~--~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i 910 (1002)
... .........++..|+|||++.+. .++.++|||||||++|+|++|..||.+......+...
T Consensus 158 -----------~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~ 222 (328)
T cd08226 158 -----------AKV----VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQK 222 (328)
T ss_pred -----------ccc----cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHH
Confidence 000 00001112356779999999764 4678999999999999999999999877655544443
Q ss_pred HhCCCC---------------------------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001865 911 LHKDLK---------------------------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 911 ~~~~~~---------------------------------------------~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
+..... .+.....+..+.+||.+||++||++|||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt- 301 (328)
T cd08226 223 LKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPS- 301 (328)
T ss_pred hcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCC-
Confidence 322111 1111224567899999999999999999
Q ss_pred hhcHHHHHcCCCcCCC
Q 001865 946 HEGANEIKKHPFFKGV 961 (1002)
Q Consensus 946 ~~~a~elL~Hp~f~~~ 961 (1002)
+.++|+||||+.+
T Consensus 302 ---a~e~l~~~~~~~~ 314 (328)
T cd08226 302 ---ASSLLSHAFFKQV 314 (328)
T ss_pred ---HHHHhhCHHHHHH
Confidence 9999999999864
No 262
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.4e-35 Score=326.62 Aligned_cols=258 Identities=28% Similarity=0.463 Sum_probs=220.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++.+.||+|++|.||++.+..++..+++|++..... ....+.+|+++++.++|+||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4579999999999999999999988899999999975421 456788899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
+||+++++|.+++.... ..++...+..++.||+.||+|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-- 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-- 170 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--
Confidence 99999999999998753 369999999999999999999999999999999999999999999999999874432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......+++.|+|||++.+..++.++|+||||+++|+|++|..||.........
T Consensus 171 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~ 225 (286)
T cd06614 171 -------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL 225 (286)
T ss_pred -------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112345788999999998888899999999999999999999999887766655
Q ss_pred HHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 908 ANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 908 ~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+...... ......++..+.+||.+||+.+|.+||+ +.++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~ 276 (286)
T cd06614 226 FLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS----AEELLQHPFLKKA 276 (286)
T ss_pred HHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC----HHHHhhChHhhcc
Confidence 555443332 2222336788999999999999999999 9999999999984
No 263
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.8e-35 Score=320.24 Aligned_cols=259 Identities=25% Similarity=0.365 Sum_probs=215.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeeccc--ccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--CeE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~--~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 744 (1002)
..|++.+.||+|+||.||++.+..+++.||+|.+.... .........+.+|++++++++|+||+++++++... +.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 37999999999999999999999999999999875421 12234556788999999999999999999998753 568
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
++||||+++++|.+++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 9999999999999998764 34889999999999999999999999999999999999999999999999998643210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.. .........|+..|+|||++.+..++.++|+|||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 215 (264)
T cd06653 160 CM------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM 215 (264)
T ss_pred cc------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH
Confidence 00 000112356899999999999888899999999999999999999999887766
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+.++.............+..+.++|.+||. +|..||+ +.+++.|||.
T Consensus 216 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~----~~~~~~~~~~ 264 (264)
T cd06653 216 AAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPT----AEFLLRHPFV 264 (264)
T ss_pred HHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCcc----HHHHhcCCCC
Confidence 66666554433333334577889999999999 5799999 9999999984
No 264
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.4e-35 Score=321.73 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=208.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+. .+..+|+|.++.... ....+.+|+.++++++|+|++++++++. .+..
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence 355678999999999999999999875 556799999876432 2356889999999999999999999875 4568
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|++|||+.+++|.+++.......+++..++.++.|++.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999999999997655556899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
. ........++..|+|||++.+..++.++||||||+++|+|++ |.+||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 209 (260)
T cd05070 156 E--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 209 (260)
T ss_pred c--------------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 0 001112245678999999988889999999999999999998 9999998877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.+....+... ...+.....+..+.+|+.+||..+|++||| +.+++
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~ 254 (260)
T cd05070 210 REVLEQVERG-YRMPCPQDCPISLHELMLQCWKKDPEERPT----FEYLQ 254 (260)
T ss_pred HHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccCcccCcC----HHHHH
Confidence 7777666543 333334456788999999999999999999 55554
No 265
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.6e-35 Score=325.80 Aligned_cols=256 Identities=22% Similarity=0.348 Sum_probs=209.7
Q ss_pred ccCCccccccccccCcEEEEEEEEc----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
...+|++.+.||+|+||.||+|.+. .++..+++|.+... ........+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 3568999999999999999999863 35678999998753 23445567889999999999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC
Q 001865 743 HVCLITDYCPGGELFLLLDRQP---------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~---------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~ 807 (1002)
..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 9999999999999999985321 1247889999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHH
Q 001865 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvi 887 (1002)
+.+||+|||++........ ........++..|+|||++.+..++.++|||||||+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 215 (283)
T cd05090 161 LHVKISDLGLSREIYSADY-------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV 215 (283)
T ss_pred CcEEeccccccccccCCcc-------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence 9999999999865321110 011223346778999999988889999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 888 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 888 l~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+|+|++ |..||.+.........+.... ..+....++..+.+++.+||+.||.+||+ +.+|++
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~i~~ 278 (283)
T cd05090 216 LWEIFSFGLQPYYGFSNQEVIEMVRKRQ-LLPCSEDCPPRMYSLMTECWQEGPSRRPR----FKDIHT 278 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHH
Confidence 999998 999998877666555554433 33344457889999999999999999999 666554
No 266
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.3e-35 Score=335.97 Aligned_cols=260 Identities=25% Similarity=0.391 Sum_probs=215.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-----eE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (1002)
+|++.+.||.|+||.||+|.+..++..||+|.+.... ........+.+|+.+++.++|+||+++++++...+ .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999998889999999987642 22445567888999999999999999999988765 88
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999995 6898888764 36999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
... ........+++.|+|||++.+. .++.++|+||||+++|+|++|..||.+.+.
T Consensus 157 ~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~ 212 (330)
T cd07834 157 EDE------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY 212 (330)
T ss_pred ccc------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH
Confidence 100 0112234688999999999887 788999999999999999999999998887
Q ss_pred HHHHHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 904 QKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~-----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.+.+..+.......+ .....+..+.+||.+||+++|.+||+ +.++++
T Consensus 213 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~ 288 (330)
T cd07834 213 IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT----ADEALA 288 (330)
T ss_pred HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC----HHHHHh
Confidence 766665544211000 01225678899999999999999999 999999
Q ss_pred CCCcCCC
Q 001865 955 HPFFKGV 961 (1002)
Q Consensus 955 Hp~f~~~ 961 (1002)
||||+++
T Consensus 289 ~~~~~~~ 295 (330)
T cd07834 289 HPYLAQL 295 (330)
T ss_pred CccHHhh
Confidence 9999974
No 267
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=9.3e-37 Score=314.58 Aligned_cols=264 Identities=28% Similarity=0.462 Sum_probs=210.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee-CC
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KT 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~ 742 (1002)
...|+++..||+|.||.||+|..+.++ +.||||.++.....+ ......++|+.+++.++||||+.+..+|-. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 458999999999999999999765553 279999987653322 223456899999999999999999998876 78
Q ss_pred eEEEEEeccCCCchhHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC----CcEEEEec
Q 001865 743 HVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDF 815 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~----g~vkL~DF 815 (1002)
.+++++||. .-+|++.++.. ..+.++...++.|+.||+.|+.|||++-|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999999 67899888742 23579999999999999999999999999999999999999977 89999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcC
Q 001865 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG 894 (1002)
|+++.+... ..+....+.++-|..|+|||.+.|. .|+++.|||+.|||+.||++-
T Consensus 181 GlaR~~~~p------------------------lkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 181 GLARLFNNP------------------------LKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred cHHHHhhcc------------------------ccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 999876422 2233445667899999999999886 578899999999999999999
Q ss_pred CCCCCCCC---------hHHHHHHHHh--C---CCCCCC------------------------------CCCCCHHHHHH
Q 001865 895 YTPFRGKT---------RQKTFANILH--K---DLKFPS------------------------------STPTSLHAKQL 930 (1002)
Q Consensus 895 ~~Pf~~~~---------~~~~~~~i~~--~---~~~~~~------------------------------~~~~s~~~~~L 930 (1002)
.+.|.+.. ....+.+|+. + .-.||. ...-++.+.+|
T Consensus 237 ~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~L 316 (438)
T KOG0666|consen 237 EPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDL 316 (438)
T ss_pred CccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHH
Confidence 99997632 1233334432 1 011111 01123346799
Q ss_pred HHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 931 MYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 931 l~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
|.+||++||.+|+| ++++|+|+||+.-
T Consensus 317 L~klL~yDP~kRIt----a~qAleh~yF~~d 343 (438)
T KOG0666|consen 317 LQKLLTYDPIKRIT----AEQALEHPYFTED 343 (438)
T ss_pred HHHHhccCchhhcc----HHHHhcccccccC
Confidence 99999999999999 9999999999973
No 268
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.9e-35 Score=328.81 Aligned_cols=257 Identities=22% Similarity=0.320 Sum_probs=211.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 738 (1002)
.+..++|.+.+.||+|+||.||++.+. .++..+|+|.++... .......+.+|+.+++++ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 355678999999999999999999863 345689999987542 233456788999999999 799999999999
Q ss_pred eeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001865 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
...+..|+||||+.+++|.+++.......+++.++..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999999997654445899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~P 897 (1002)
........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 189 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p 243 (302)
T cd05055 189 RDIMNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNP 243 (302)
T ss_pred ccccCCCc-------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54321110 001122346788999999999889999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|.+......+................+..+.+|+.+||..+|++||++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~el 294 (302)
T cd05055 244 YPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQI 294 (302)
T ss_pred cCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 988766555555555444444444567899999999999999999994433
No 269
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.2e-35 Score=321.99 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=209.9
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++.++|+||+++++++. .+..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI 75 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence 45678999999999999999999987 4567899999875432 3457888999999999999999999874 4678
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.+++|.+++.......++..++..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999999987765567899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
. ........++..|+|||++....++.++||||||+++|+|++ |++||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 156 E--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred C--------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 0 001122346778999999998889999999999999999998 9999998877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
......+... ...+.....+..+.+|+.+||..+|++||+ +++++
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~ 254 (260)
T cd05067 210 PEVIQNLERG-YRMPRPDNCPEELYELMRLCWKEKPEERPT----FEYLR 254 (260)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence 7766655443 333444556789999999999999999999 66654
No 270
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.2e-35 Score=320.61 Aligned_cols=255 Identities=25% Similarity=0.377 Sum_probs=204.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.+.....||+|+||.||++.+..++..|++|.+... .......+.+|+.+++.++|+||+++++++..++.+|+||
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3444456799999999999999999999999988654 3345567889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l--~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~ 825 (1002)
||+++++|.+++.... ..+ +...+..++.||+.||+|||++||+||||||+||+++. ++.++|+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 85 EQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred ecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence 9999999999987542 234 88889999999999999999999999999999999976 6799999999885432110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~--~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.......|++.|+|||++.+.. ++.++|+||||+++|+|++|..||.....
T Consensus 164 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~ 216 (268)
T cd06624 164 ---------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE 216 (268)
T ss_pred ---------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence 0111235789999999986643 77899999999999999999999976433
Q ss_pred HHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 904 QKTF-ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 904 ~~~~-~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.... ................+..+.+|+.+||..+|.+||| +.+++.||||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 268 (268)
T cd06624 217 PQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRAS----AHDLLQDPFL 268 (268)
T ss_pred hhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCC----HHHHHhCCCC
Confidence 2211 1111111111122346788999999999999999999 9999999997
No 271
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.2e-35 Score=336.83 Aligned_cols=263 Identities=26% Similarity=0.434 Sum_probs=211.4
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe----eCCeE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHV 744 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~~ 744 (1002)
++|.+.+.||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+|+.++||||+++++++. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 689999999999999999999999999999999875422 2334566778999999999999999999876 34578
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999999 57898888654 44999999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
... .........|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 161 ~~~-----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 161 PTE-----------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred CcC-----------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 100 0011223478999999999866 4578899999999999999999999987665
Q ss_pred HHHHHHHHhC----------------------CCC----CC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 904 QKTFANILHK----------------------DLK----FP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~----------------------~~~----~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...+..+... ... .+ .....+..+.+||.+||+.+|.+||+ +.+++.
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~ 293 (334)
T cd07855 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERIT----VEQALQ 293 (334)
T ss_pred HHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcC----HHHHHh
Confidence 4433322210 000 00 01235778999999999999999999 999999
Q ss_pred CCCcCCCC
Q 001865 955 HPFFKGVN 962 (1002)
Q Consensus 955 Hp~f~~~~ 962 (1002)
||||.+..
T Consensus 294 ~~~~~~~~ 301 (334)
T cd07855 294 HPFLAQYH 301 (334)
T ss_pred Chhhhhcc
Confidence 99999753
No 272
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.9e-35 Score=320.45 Aligned_cols=250 Identities=23% Similarity=0.374 Sum_probs=207.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..+|++.+.||+|+||.||++.+. ++..+|+|++.+... ....+.+|+++++.++||||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 457999999999999999999885 466899999875422 234577899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~- 155 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY- 155 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc-
Confidence 99999999999997643 3589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
.......++..|+|||.+.+..++.++||||||+++|+|++ |..||...+..+.
T Consensus 156 -------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05059 156 -------------------------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV 210 (256)
T ss_pred -------------------------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence 00111224567999999998889999999999999999998 8999988877776
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...+... ...+.....+..+.+|+.+||..+|++||| +.++++
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~~~l~ 253 (256)
T cd05059 211 VESVSAG-YRLYRPKLAPTEVYTIMYSCWHEKPEDRPA----FKKLLS 253 (256)
T ss_pred HHHHHcC-CcCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 6666543 333334457889999999999999999999 666654
No 273
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.6e-35 Score=327.39 Aligned_cols=261 Identities=21% Similarity=0.336 Sum_probs=214.2
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeE
Q 001865 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (1002)
+...+..++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++++ +|+||++++
T Consensus 5 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 82 (293)
T cd05053 5 PEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 82 (293)
T ss_pred cccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 44567778999999999999999999998644 3789999987542 233456688999999999 899999999
Q ss_pred EEEeeCCeEEEEEeccCCCchhHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001865 736 ASFQTKTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~N 801 (1002)
+++..++.+|++|||+++++|..++... ....+++..+..++.||+.||.|||++||+|+||||+|
T Consensus 83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N 162 (293)
T cd05053 83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN 162 (293)
T ss_pred EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence 9999999999999999999999998642 24568999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDI 881 (1002)
|+++.++.+||+|||++........ ........++..|+|||++.+..++.++||
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 217 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDY-------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDV 217 (293)
T ss_pred EEEcCCCeEEeCccccccccccccc-------------------------eeccCCCCCCccccCHHHhccCCcCcccce
Confidence 9999999999999999865431100 001112235678999999988889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|||||++|+|++ |..||.+....+....+.... ........+..+.+|+.+||..||++||| +.++++
T Consensus 218 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~eil~ 286 (293)
T cd05053 218 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY-RMEKPQNCTQELYHLMRDCWHEVPSQRPT----FKQLVE 286 (293)
T ss_pred eehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHH
Confidence 999999999997 999999887777666555442 33334456788999999999999999999 555554
No 274
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.9e-35 Score=320.64 Aligned_cols=252 Identities=22% Similarity=0.331 Sum_probs=209.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+..+|++++.||+|+||.||++.+.. +..+|+|.+..... ....+.+|+.+++.++||||+++++++...+.+|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEE
Confidence 34679999999999999999998744 44699998875422 23567889999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+.+++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++.......
T Consensus 77 v~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~- 154 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE- 154 (256)
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc-
Confidence 999999999999997643 358999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~ 905 (1002)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+...
T Consensus 155 -------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05113 155 -------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE 209 (256)
T ss_pred -------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 001112345678999999988889999999999999999998 999998887777
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
....+...... +.....+..+.+++.+||..+|.+||+ +.+|+.+
T Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~ll~~ 254 (256)
T cd05113 210 TVEKVSQGLRL-YRPHLASEKVYAIMYSCWHEKAEERPT----FQQLLSS 254 (256)
T ss_pred HHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHh
Confidence 77777655333 223346788999999999999999999 7777753
No 275
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.5e-35 Score=329.56 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=206.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeE--EEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCC
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~--~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
+..++|++.+.||+|+||.||+|.+..++.. +++|.++.. ........+.+|+.++.++ +||||+++++++...+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 3456899999999999999999999777754 577766532 2334456788899999999 8999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC
Q 001865 743 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g 808 (1002)
.+|+||||+++++|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999997532 23588999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHH
Q 001865 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
.+||+|||++...... .......++..|+|||++.+..++.++|||||||++
T Consensus 162 ~~kl~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 162 VAKIADFGLSRGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred cEEeCccccCcccchh----------------------------hhcccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 9999999988421100 001112346679999999888889999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 889 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|+|++ |..||.+.+..+....+... .........+..+.+|+.+||+.+|++||+ +.+++++
T Consensus 214 ~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~ 276 (303)
T cd05088 214 WEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 276 (303)
T ss_pred HHHHhcCCCCcccCChHHHHHHHhcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 99998 99999887776666555433 222333346788999999999999999999 6666554
No 276
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.3e-35 Score=319.16 Aligned_cols=252 Identities=28% Similarity=0.404 Sum_probs=208.4
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+|+.||+|.++............+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 58999999999999999999999899999999987644444555678889999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+++++|..++... ....++...++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 999999999998642 23458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--hH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQ 904 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~--~~ 904 (1002)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||.... ..
T Consensus 161 --------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08224 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence 01123468889999999998889999999999999999999999996543 22
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.....+..+..........+..+.++|.+||..+|++||++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ 257 (267)
T cd08224 215 SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISY 257 (267)
T ss_pred HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHH
Confidence 3333333332221112246778999999999999999999443
No 277
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.6e-35 Score=322.82 Aligned_cols=257 Identities=20% Similarity=0.300 Sum_probs=210.1
Q ss_pred ccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 45689999999999999999999977 77899999886432 233445688899999999999999999999998
Q ss_pred CeEEEEEeccCCCchhHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC---cEEEE
Q 001865 742 THVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLT 813 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g---~vkL~ 813 (1002)
+..|+||||+++++|.+++..... ..+++..+..++.||+.||+|||+++++|+||||+||+++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999999875421 2589999999999999999999999999999999999998765 59999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc
Q 001865 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt 893 (1002)
|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++
T Consensus 162 dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 162 DFGMARDIYRASY-------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred cCccccccCCccc-------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHc
Confidence 9999865421100 000112234568999999998889999999999999999996
Q ss_pred -CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 894 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 894 -G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|..||.+.+..+....+... ........++..+.+|+.+||+.+|++||+ +.++++|
T Consensus 217 ~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps----~~~vl~~ 274 (277)
T cd05036 217 LGYMPYPGRTNQEVMEFVTGG-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPN----FATILER 274 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 99999988777766555443 222333456788999999999999999999 7777765
No 278
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.1e-35 Score=319.67 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=210.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.++|++.+.||+|+||.||+|.+..+ ...+|+|.++... .......+.+|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 46799999999999999999998644 4589999887542 334456788899999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999997643 36899999999999999999999999999999999999999999999999998664311
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
... .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus 160 ~~~-------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~ 214 (266)
T cd05033 160 EAT-------------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN 214 (266)
T ss_pred ccc-------------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH
Confidence 100 00112235678999999998889999999999999999997 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......+... ...+.....+..+.+|+.+||+.+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~ei~~ 260 (266)
T cd05033 215 QDVIKAVEDG-YRLPPPMDCPSALYQLMLDCWQKDRNERPT----FSQIVS 260 (266)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 7776666543 233334457889999999999999999999 555554
No 279
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4e-35 Score=319.17 Aligned_cols=247 Identities=22% Similarity=0.386 Sum_probs=206.4
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEE-eeCCe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-~~~~~ 743 (1002)
.++..+|++.+.||+|+||.||++.. .+..+|+|.++.. .....+.+|+.++++++|+|++++++++ ..++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 46678999999999999999999987 4778999988643 2345688899999999999999999875 45678
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.|+||||+++++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 99999999999999999876555689999999999999999999999999999999999999999999999998854221
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
. .....++..|+|||++.+..++.++|||||||++|+|++ |+.||....
T Consensus 155 ~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 155 T------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred c------------------------------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0 112234568999999988889999999999999999997 999998877
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.......+..+ ........++..+.+|+.+||+.+|++||| +.+++
T Consensus 205 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~ 250 (256)
T cd05082 205 LKDVVPRVEKG-YKMDAPDGCPPVVYDVMKQCWHLDAATRPS----FLQLR 250 (256)
T ss_pred HHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHH
Confidence 76666655443 222333456889999999999999999999 55554
No 280
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7.3e-35 Score=316.25 Aligned_cols=246 Identities=22% Similarity=0.326 Sum_probs=201.7
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++++...+..|+||||+.++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36899999999999999999999999886432 3344567889999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001865 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++... ...+++..++.++.|++.||.|||++||+|+||||+|||++.++.+||+|||++........
T Consensus 79 ~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------- 149 (252)
T cd05084 79 DFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-------- 149 (252)
T ss_pred cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc--------
Confidence 999998654 24589999999999999999999999999999999999999999999999999854321000
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001865 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (1002)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+...
T Consensus 150 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~ 212 (252)
T cd05084 150 -----------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212 (252)
T ss_pred -----------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC
Confidence 000011123567999999988889999999999999999997 99999877666555544432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+.....+..+.+|+.+||+.+|++||+ +.+++
T Consensus 213 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 247 (252)
T cd05084 213 -VRLPCPELCPDAVYRLMERCWEYDPGQRPS----FSTVH 247 (252)
T ss_pred -CCCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 233334456789999999999999999999 55554
No 281
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.2e-35 Score=333.50 Aligned_cols=259 Identities=24% Similarity=0.375 Sum_probs=207.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|.+.+.||.|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 368999999999999999999999999999999986542 24456678899999999999999999876543
Q ss_pred --------CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEE
Q 001865 742 --------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSL 812 (1002)
Q Consensus 742 --------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-~g~vkL 812 (1002)
...|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE
Confidence 36899999995 689888864 34899999999999999999999999999999999999974 567899
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHH
Q 001865 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~el 891 (1002)
+|||++........ .........|+..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 157 ~dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el 212 (342)
T cd07854 157 GDFGLARIVDPHYS------------------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 212 (342)
T ss_pred CCcccceecCCccc------------------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHH
Confidence 99999854321100 0001122357889999998754 4577899999999999999
Q ss_pred HcCCCCCCCCChHHHHHHHHhCCCC----------------------CC------CCCCCCHHHHHHHHHccccCcCCCC
Q 001865 892 LYGYTPFRGKTRQKTFANILHKDLK----------------------FP------SSTPTSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 892 ltG~~Pf~~~~~~~~~~~i~~~~~~----------------------~~------~~~~~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
++|+.||.+.+.......+...... .+ .....+.++.+||.+||+.||.+||
T Consensus 213 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 292 (342)
T cd07854 213 LTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRL 292 (342)
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhcc
Confidence 9999999887766555544432100 00 0123567889999999999999999
Q ss_pred CChhcHHHHHcCCCcCCC
Q 001865 944 GSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 944 t~~~~a~elL~Hp~f~~~ 961 (1002)
| +.++++||||+.+
T Consensus 293 t----~~ell~h~~~~~~ 306 (342)
T cd07854 293 T----AEEALMHPYMSCY 306 (342)
T ss_pred C----HHHHhCCCccccc
Confidence 9 9999999999864
No 282
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.7e-35 Score=335.18 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=212.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe----
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 743 (1002)
.++|.+.+.||+|+||.||+|.+..++..||+|++.... ........+.+|+.+++.++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 468999999999999999999999999999999987542 233445667889999999999999999988866554
Q ss_pred --EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 744 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 744 --~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
.|+|+||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 7899999875 35899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 169 DDE------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred ccc------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 210 123357889999999865 3577899999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 901 KTRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~-----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
......+..+.......+ .....+..+.+||.+||..+|++||| +.+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt----~~e 294 (343)
T cd07851 219 SDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT----AAE 294 (343)
T ss_pred CChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC----HHH
Confidence 777666655543211000 01234778999999999999999999 999
Q ss_pred HHcCCCcCCC
Q 001865 952 IKKHPFFKGV 961 (1002)
Q Consensus 952 lL~Hp~f~~~ 961 (1002)
|++||||...
T Consensus 295 ll~h~~~~~~ 304 (343)
T cd07851 295 ALAHPYLAEY 304 (343)
T ss_pred HhcCCCcccc
Confidence 9999999973
No 283
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=5.3e-35 Score=316.47 Aligned_cols=250 Identities=48% Similarity=0.864 Sum_probs=216.8
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCch
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||.|+||.||++.+..+++.||+|++.+...........+..|+.+++.++||||+++++.+..++.+|+||||+.+++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999888999999999877555555677888999999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001865 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++... ..+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------- 147 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-----------
Confidence 9999765 358999999999999999999999999999999999999999999999999985532110
Q ss_pred hcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001865 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (1002)
.......|+..|+|||.+.+...+.++|+||||+++|+|++|..||...+.......+......
T Consensus 148 ----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (250)
T cd05123 148 ----------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR 211 (250)
T ss_pred ----------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC
Confidence 1123456889999999998888889999999999999999999999888777777777664444
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 917 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 917 ~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
++. ..+..+.+||++||..||++||+..+ +.++++||||
T Consensus 212 ~~~--~~~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~~~~~f 250 (250)
T cd05123 212 FPE--FLSPEARDLISGLLQKDPTKRLGSGG-AEEIKAHPFF 250 (250)
T ss_pred CCC--CCCHHHHHHHHHHhcCCHhhCCCccc-HHHHHhCCCC
Confidence 433 35788999999999999999999433 4999999998
No 284
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.8e-35 Score=324.33 Aligned_cols=257 Identities=21% Similarity=0.323 Sum_probs=211.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
++..+|++++.||.|+||.||++.+..+ +..+|+|+++... .......+.+|+.++..++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 3456899999999999999999987543 5789999987542 23344668889999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~ 806 (1002)
.+..++++||+.+++|.+++... ....++...+..++.|++.||.|||++||+||||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 99999999999999999998532 1234788899999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHH
Q 001865 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (1002)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGv 886 (1002)
++.+||+|||++....... .........+++.|+|||++.+..++.++|||||||
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05091 160 KLNVKISDLGLFREVYAAD-------------------------YYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214 (283)
T ss_pred CCceEecccccccccccch-------------------------heeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence 9999999999986532110 001112335678999999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 887 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 887 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++|+|++ |..||.+......+..+...... +....++..+.+|+.+||+.+|.+||+ +++|+.
T Consensus 215 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~RP~----~~~i~~ 278 (283)
T cd05091 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL-PCPDDCPAWVYTLMLECWNEFPSRRPR----FKDIHS 278 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHhCCCcccCCC----HHHHHH
Confidence 9999998 88999988887777776665432 223457888999999999999999999 666654
No 285
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.8e-35 Score=329.53 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=201.9
Q ss_pred CcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCchhHHH
Q 001865 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 760 (1002)
Q Consensus 681 ~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 760 (1002)
+++.||.++...+++.||+|++.... ........+.+|+.+++.++|+||+++++++...+..|++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44566666676799999999997652 24456678999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 001865 761 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (1002)
Q Consensus 761 ~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (1002)
.......+++..+..++.||+.||+|||++||+|+||||+||+++.+|.+||+|||.+..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------------ 158 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------------ 158 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc------------
Confidence 86545568999999999999999999999999999999999999999999999999885442111000
Q ss_pred CCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCC-
Q 001865 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKF- 917 (1002)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~--~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~- 917 (1002)
...........++..|+|||++.+. .++.++|||||||++|+|++|..||..............+....
T Consensus 159 --------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (314)
T cd08216 159 --------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCL 230 (314)
T ss_pred --------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccc
Confidence 0001112345678899999998763 57889999999999999999999998765544332222211100
Q ss_pred -------------------------------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 918 -------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 918 -------------------------------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
......+..+.+|+.+||.+||++||| ++++|+||||+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~p~~~~~ 301 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS----ASQLLNHSFFKQC 301 (314)
T ss_pred cccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC----HHHHhcCchHhhh
Confidence 000112356789999999999999999 9999999999975
No 286
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.3e-35 Score=317.87 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=212.3
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|.+.+.||+|+||.||++.+. .++.+|+|.+.... .....+.+|+.+++.++|+||+++++++......
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence 356789999999999999999999975 45779999987542 2345688899999999999999999999998999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++.......++...+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999999998765567999999999999999999999999999999999999999999999999998553210
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
. ........++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+.
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 157 E--------------------------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred h--------------------------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 0 000112234678999999998889999999999999999998 9999998887
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+..+... ...+.....+..+.+++.+||+.+|++||+ +++++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~l~ 255 (261)
T cd05034 211 REVLEQVERG-YRMPRPPNCPEELYDLMLQCWDKDPEERPT----FEYLQ 255 (261)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHH
Confidence 7777766553 333444446788999999999999999999 55554
No 287
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.4e-35 Score=326.52 Aligned_cols=257 Identities=25% Similarity=0.361 Sum_probs=216.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
...|...+.||.|+||.||++.+..++..+|+|.+.............+.+|+++++.++|+|++++++++...+..|+|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 34688899999999999999999999999999998754333444556788899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+++... ...+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~---- 167 (308)
T cd06634 94 MEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 167 (308)
T ss_pred EEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC----
Confidence 99995 6887777543 24589999999999999999999999999999999999999999999999998854321
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.....|++.|+|||++. ...++.++|||||||++|+|++|..||...+..
T Consensus 168 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 220 (308)
T cd06634 168 ---------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 220 (308)
T ss_pred ---------------------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH
Confidence 12346888999999975 345678999999999999999999999887666
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.....+.............+..+.+||.+||..+|++||+ +.++++|||+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~ll~~~~~~~~ 273 (308)
T cd06634 221 SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCC----HHHHhhCcccccc
Confidence 6655555554444334457788999999999999999999 9999999999973
No 288
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6.4e-35 Score=324.43 Aligned_cols=254 Identities=30% Similarity=0.472 Sum_probs=213.8
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|.....||+|+||.||++.+..++..+|+|.+... .......+.+|+.+++.++|+||+++++++...++.|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 44457799999999999999999999999987533 233456688899999999999999999999999999999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+++++|.+++.. ..+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~----- 170 (292)
T cd06657 99 LEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 170 (292)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-----
Confidence 999999998754 348999999999999999999999999999999999999999999999999875432110
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i 910 (1002)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+.........+
T Consensus 171 ----------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~ 228 (292)
T cd06657 171 ----------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228 (292)
T ss_pred ----------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 1122346889999999998888899999999999999999999999887766555544
Q ss_pred HhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 911 LHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 911 ~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.... ..+......+..+.+++.+||..+|.+||+ +.++++||||...
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~----~~~ll~~~~~~~~ 276 (292)
T cd06657 229 RDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 276 (292)
T ss_pred HhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcC----HHHHhcChHHhcc
Confidence 3322 122233446788999999999999999999 9999999999974
No 289
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.1e-34 Score=314.53 Aligned_cols=257 Identities=30% Similarity=0.437 Sum_probs=216.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--CeEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lV 747 (1002)
+|++.+.||+|++|.||++.+..+++.+++|++..... .......+.+|+.++++++||||+++++.+... +.+++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 47888999999999999999998999999999876532 235567888999999999999999999999988 899999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.+++|.+++.... .+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999998753 6999999999999999999999999999999999999999999999999998654321100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC-hHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~-~~~~ 906 (1002)
.......++..|+|||.+.+...+.++||||||+++|+|++|..||.... ....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 212 (260)
T cd06606 158 -------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA 212 (260)
T ss_pred -------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 01223568899999999988888999999999999999999999998765 2233
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+.............+..+.+||.+||..+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 260 (260)
T cd06606 213 LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT----ADELLQHPFL 260 (260)
T ss_pred HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCC----HHHHhhCCCC
Confidence 33333212222223345788999999999999999999 9999999997
No 290
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.5e-35 Score=324.56 Aligned_cols=256 Identities=25% Similarity=0.359 Sum_probs=209.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCC----------------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG----------------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 730 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~----------------~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn 730 (1002)
..++|++++.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+++++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCC
Confidence 3568999999999999999999886543 568999987643 2345677889999999999999
Q ss_pred cceeEEEEeeCCeEEEEEeccCCCchhHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001865 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~N 801 (1002)
|+++++++..++..++||||+.+++|.+++.... ...+++..++.++.|++.||+|||++||+|+||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999997643 1258999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDI 881 (1002)
|+++.++.++|+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-------------------------YRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-------------------------eeecCcCCCCceecCHHHhhcCCCCccchh
Confidence 9999999999999999854321100 011223456789999999988889999999
Q ss_pred HHHHHHHHHHHc--CCCCCCCCChHHHHHHHHhC------CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 882 WALGILLYEMLY--GYTPFRGKTRQKTFANILHK------DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 882 wSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
|||||++|+|++ |..||...+....+..+... ....+.....+.++.+|+.+||+.||++||| +.+|+
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt----~~el~ 291 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPT----FREIH 291 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCC----HHHHH
Confidence 999999999997 78899877766666655432 1122233345788999999999999999999 66664
No 291
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7.5e-35 Score=317.92 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=206.4
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|.+...||+|+||.||+|.+..+ ..+|+|.+.... .....+.+|+.+++.++|+|++++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 4456899999999999999999998555 469999876542 22356788999999999999999998875 45689
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++.......++...+..++.||+.||.|||++||+|+||||+||++++++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
........++..|+|||++.+..++.++||||||+++|+|++ |..||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred --------------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 001112346778999999988889999999999999999999 99999988777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.....+... ...+.....+..+.+|+.+||..||++||+ +++++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~ 254 (260)
T cd05069 211 EVLEQVERG-YRMPCPQGCPESLHELMKLCWKKDPDERPT----FEYIQ 254 (260)
T ss_pred HHHHHHHcC-CCCCCCcccCHHHHHHHHHHccCCcccCcC----HHHHH
Confidence 766665543 333333456788999999999999999999 55554
No 292
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9.1e-35 Score=319.00 Aligned_cols=253 Identities=24% Similarity=0.335 Sum_probs=205.8
Q ss_pred ccccccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-----
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
|++.+.||+|+||.||+|.+..+ +..||+|.++... ........+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 67889999999999999997653 4789999987542 23445567889999999999999999999876544
Q ss_pred -eEEEEEeccCCCchhHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001865 743 -HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
..++||||+++++|..++... ....+++..+..++.||+.||.|||++||+||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 379999999999999998542 223689999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~ 896 (1002)
+........ ........++..|+|||++.+..++.++|||||||++|+|++ |..
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~ 214 (273)
T cd05035 160 SKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214 (273)
T ss_pred eeecccccc-------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 865432110 001112235678999999988889999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
||.+....+.+..+..+. ........+..+.+++.+||..||++||+ +.++++
T Consensus 215 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~e~~~ 267 (273)
T cd05035 215 PYPGVENHEIYDYLRHGN-RLKQPEDCLDELYDLMYSCWRADPKDRPT----FTKLRE 267 (273)
T ss_pred CCCCCCHHHHHHHHHcCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 998888777776665543 33334457889999999999999999999 555544
No 293
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.2e-34 Score=315.86 Aligned_cols=248 Identities=21% Similarity=0.290 Sum_probs=201.8
Q ss_pred cccccCcEEEEEEEE--cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 676 PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
.||+|+||.||+|.+ ..++..+|+|+++.. .........+.+|+.+++.++||||+++++++.. +..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKND-NNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCC-CCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 589999999999965 456789999998754 2334456778899999999999999999998764 567999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------ 151 (257)
T cd05116 80 GPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------ 151 (257)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe------
Confidence 9999999764 45899999999999999999999999999999999999999999999999998654321110
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~ 912 (1002)
........+++.|+|||.+....++.++|||||||++|+|++ |..||...........+..
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~ 213 (257)
T cd05116 152 ------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213 (257)
T ss_pred ------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC
Confidence 000112235678999999988888999999999999999997 9999988777776666654
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+. ..+....++..+.+||.+||+.||++||++..++..|
T Consensus 214 ~~-~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l 252 (257)
T cd05116 214 GE-RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRL 252 (257)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHH
Confidence 43 2333345788999999999999999999965544433
No 294
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=8.4e-35 Score=321.71 Aligned_cols=254 Identities=24% Similarity=0.435 Sum_probs=208.7
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC---CCCCcceeEEEEeeCCe----
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTH---- 743 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~---- 743 (1002)
|++.+.||.|+||.||++.+..+++.||+|.++.... .......+.+|+.+++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7788999999999999999988899999999975432 222334566787777666 69999999999988776
Q ss_pred -EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 744 -VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 -~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
+|++|||+. ++|.+++.......+++..++.++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999995 589998877544569999999999999999999999999999999999999999999999999985542
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
... ......++..|+|||++.+..++.++|||||||++|+|++|++||.+.+
T Consensus 159 ~~~----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 159 FEM----------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred CCc----------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 110 0112357889999999998889999999999999999999999999888
Q ss_pred hHHHHHHHHhCCC-----CCC-----------C---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001865 903 RQKTFANILHKDL-----KFP-----------S---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 903 ~~~~~~~i~~~~~-----~~~-----------~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
..+.+.++..... .++ . ....+..+.+||.+||+.||.+||+ +.+++.|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~il~~~~ 286 (287)
T cd07838 211 EADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS----AFEALQHPY 286 (287)
T ss_pred hHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCC----HHHHhcCcC
Confidence 7777766654210 000 0 0123467789999999999999999 999999999
Q ss_pred c
Q 001865 958 F 958 (1002)
Q Consensus 958 f 958 (1002)
|
T Consensus 287 ~ 287 (287)
T cd07838 287 F 287 (287)
T ss_pred C
Confidence 8
No 295
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.7e-35 Score=336.18 Aligned_cols=260 Identities=22% Similarity=0.297 Sum_probs=211.4
Q ss_pred cccccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEE
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~ 737 (1002)
+.+..++|.+.+.||+|+||.||+|.+. .+++.||+|+++... .......+.+|+.+|.++. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 4566778999999999999999999963 345689999997542 2233456889999999997 9999999999
Q ss_pred EeeCCeEEEEEeccCCCchhHHHhhCCC----------------------------------------------------
Q 001865 738 FQTKTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 765 (1002)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------------------------------------- 765 (1002)
+...+.+|+|||||.+|+|.+++.+...
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999865321
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001865 766 --------------------------------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 766 --------------------------------------------~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~N 801 (1002)
..++...+..++.||+.||+|||+++|+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 246777889999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDI 881 (1002)
||++.++.+||+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSN-------------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccc-------------------------cccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 9999999999999999864321100 001123457889999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|||||++|+|++ |..||......+.....+......+....++..+.+|+.+||..+|.+||+ +.+|++
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs----~~ell~ 394 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPD----FSQLVH 394 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence 999999999997 899998766655555555544444444457889999999999999999999 555543
No 296
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.6e-34 Score=312.01 Aligned_cols=252 Identities=31% Similarity=0.513 Sum_probs=214.6
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|.+.+.||+|++|.||++.+..++..+++|++..... .....+.+|+.+++.++|+||+++++++...+..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 48889999999999999999988999999999976432 355778899999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK---- 152 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc----
Confidence 999999999987643 468999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......
T Consensus 153 ------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 208 (253)
T cd05122 153 ------------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK 208 (253)
T ss_pred ------------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence 02245688999999999888888999999999999999999999987755444444
Q ss_pred HHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001865 910 ILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 910 i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
+..... ..+.....+..+.++|.+||+.||++||| +.++++|||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~~~l~~~~ 253 (253)
T cd05122 209 IATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT----AEQLLKHPF 253 (253)
T ss_pred HHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCC----HHHHhcCCC
Confidence 433222 22222223788999999999999999999 999999998
No 297
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=9.4e-35 Score=320.95 Aligned_cols=253 Identities=20% Similarity=0.299 Sum_probs=208.9
Q ss_pred cccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
++..+|++.+.||+|+||.||++... .++..+|+|.+... .......+.+|+++++.++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTE 78 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence 34568999999999999999999753 34678999987643 34455678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPT-------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~-------------~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~ 807 (1002)
.+..|+||||+++++|.+++..... ..+++..++.++.||+.||+|||++||+|+||||+|||++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 9999999999999999999875421 348899999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHH
Q 001865 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvi 887 (1002)
+.+||+|||++........ ........+++.|+|||++.+..++.++|||||||+
T Consensus 159 ~~~kL~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 213 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDY-------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV 213 (280)
T ss_pred CCEEECCCCceeEcCCCce-------------------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHH
Confidence 9999999999864321100 011123346788999999998889999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 888 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 888 l~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+|+|++ |.+||...........+..+.. ......++..+.+||.+||+.||.+||++.+
T Consensus 214 l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ 273 (280)
T cd05092 214 LWEIFTYGKQPWYQLSNTEAIECITQGRE-LERPRTCPPEVYAIMQGCWQREPQQRMVIKD 273 (280)
T ss_pred HHHHHcCCCCCCccCCHHHHHHHHHcCcc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 999998 9999988777777666655432 2333457888999999999999999999443
No 298
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.1e-36 Score=347.53 Aligned_cols=256 Identities=24% Similarity=0.364 Sum_probs=222.8
Q ss_pred ccccCCccccccccccCcEEEEEEEEc-----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+...+.+..+.||+|+||+||+++.. .....||||.++... +.....+|.+|++++..++|||||+++|++.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 355678888999999999999999863 234579999998653 3446788999999999999999999999999
Q ss_pred eCCeEEEEEeccCCCchhHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC
Q 001865 740 TKTHVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~ 807 (1002)
.++..|||+|||..|+|.++|.... ...|+..+.+.|+.||+.|+.||-++.+|||||-..|+||.++
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 9999999999999999999998421 1238999999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHH
Q 001865 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvi 887 (1002)
-.|||+|||+++..... ++++ ......-...|||||.+....|+.+|||||+||+
T Consensus 640 l~VKIsDfGLsRdiYss---------DYYk----------------~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVv 694 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSS---------DYYK----------------VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVV 694 (774)
T ss_pred eEEEecccccchhhhhh---------hhhc----------------ccCCceeeeecCCHHHhhcCcccchhhhhhhhhh
Confidence 99999999999765422 1111 1112345678999999999999999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 888 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 888 l~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|||+++ |+.||.+.++.+++..+..+.. ++.+..++.++.+||..||+.+|.+||+++++
T Consensus 695 LWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 695 LWEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred hhhhhccccCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 999995 9999999999999999999888 88888899999999999999999999997664
No 299
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.3e-34 Score=314.98 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=211.4
Q ss_pred ccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEecc
Q 001865 675 KPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
+.||+|+||.||+|.+... +..|++|.++.... ......+.+|+.+++.++|+||+++++++.....+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999766 88999999986532 224678889999999999999999999999999999999999
Q ss_pred CCCchhHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 752 PGGELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 752 ~ggsL~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
++++|.+++.... ...+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999998641 356999999999999999999999999999999999999999999999999998654322
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.. ........+++.|+|||.+....++.++|||||||++|+|++ |..||.....
T Consensus 159 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 213 (262)
T cd00192 159 DY-------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN 213 (262)
T ss_pred cc-------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence 11 111234467889999999988888999999999999999998 6999999887
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
......+... ...+.....+..+.+++.+||..+|.+||+ +.++++|
T Consensus 214 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~~ 260 (262)
T cd00192 214 EEVLEYLRKG-YRLPKPEYCPDELYELMLSCWQLDPEDRPT----FSELVER 260 (262)
T ss_pred HHHHHHHHcC-CCCCCCccCChHHHHHHHHHccCCcccCcC----HHHHHHh
Confidence 7777766653 233334456889999999999999999999 8888764
No 300
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.1e-34 Score=312.21 Aligned_cols=254 Identities=27% Similarity=0.462 Sum_probs=217.9
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||+|++|.||++.+..+++.|++|.+..... .......+.+|++++++++|||++++++++...+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 58899999999999999999998999999999986533 23456788999999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 154 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--- 154 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc---
Confidence 99999999999765 4589999999999999999999999999999999999999999999999999865432110
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
......|+..|+|||.+.+..++.++||||||+++|+|++|..||...........
T Consensus 155 ------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (254)
T cd06627 155 ------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR 210 (254)
T ss_pred ------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 01234688899999999888888899999999999999999999987766555555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+...... +.....+..+.+++.+||..+|++||+ +.+++.||||
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~~ 254 (254)
T cd06627 211 IVQDDHP-PLPEGISPELKDFLMQCFQKDPNLRPT----AKQLLKHPWI 254 (254)
T ss_pred HhccCCC-CCCCCCCHHHHHHHHHHHhCChhhCcC----HHHHhcCCCC
Confidence 5433222 223346788999999999999999999 9999999998
No 301
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.7e-35 Score=325.72 Aligned_cols=260 Identities=21% Similarity=0.300 Sum_probs=208.8
Q ss_pred cccccCCccccccccccCcEEEEEEEEcCC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeE
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (1002)
+.+..++|.+.+.||+|+||.||++.+... ...+|+|.++... .......+.+|+.+++.+ +||||++++
T Consensus 13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 90 (307)
T cd05098 13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLL 90 (307)
T ss_pred ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 345567899999999999999999987432 3479999987542 233456788899999999 799999999
Q ss_pred EEEeeCCeEEEEEeccCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001865 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~N 801 (1002)
+++...+..|+||||+.+++|.+++.... ...++...++.++.||+.||+|||++|++||||||+|
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 170 (307)
T cd05098 91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN 170 (307)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh
Confidence 99999999999999999999999997542 1348889999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDI 881 (1002)
|+++.++.+||+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 225 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDV 225 (307)
T ss_pred eEEcCCCcEEECCCcccccccccch-------------------------hhccccCCCccceeChHHhccCCCCcHHHH
Confidence 9999999999999999854321100 000111234578999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
|||||++|+|++ |..||.+....+....+... ...+.....+..+.+|+.+||..+|++||++.++++.
T Consensus 226 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 226 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 999999999998 89999887766555554433 3333344568899999999999999999995544443
No 302
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.6e-35 Score=322.74 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=210.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
...+|.+.+.||+|+||.||+|.+.. ++..+++|.+... .......+.+|+.++++++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 35679999999999999999998643 4567899988643 233446688999999999999999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC
Q 001865 742 THVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~ 807 (1002)
+..++||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 99999999999999999997532 2348999999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHH
Q 001865 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvi 887 (1002)
+.++|+|||++........ ........|++.|+|||++.+..++.++|||||||+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 214 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 214 (291)
T ss_pred CcEEECCCCcccccCCCce-------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHH
Confidence 9999999999854321110 011123457889999999998889999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 888 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 888 l~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+|+|++ |..||...+....+..+..+.... .....+..+.+|+.+||+.+|++||++.++++.+
T Consensus 215 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l 279 (291)
T cd05094 215 LWEIFTYGKQPWFQLSNTEVIECITQGRVLE-RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279 (291)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHhCCCCCC-CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 999998 999998888777776665544332 2234678899999999999999999965544443
No 303
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.3e-34 Score=327.34 Aligned_cols=254 Identities=27% Similarity=0.447 Sum_probs=207.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee-CCeEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~l 746 (1002)
.++|++++.||.|+||.||+|.+..+++.||+|.+.+.. ........+.+|+.+++.++||||++++++|.. ....|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 568999999999999999999999999999999887542 223344667789999999999999999999865 568899
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+ +++|..++.. ..++...+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 88 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~--- 160 (328)
T cd07856 88 VTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP--- 160 (328)
T ss_pred Eeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---
Confidence 99999 7789888864 3478899999999999999999999999999999999999999999999998853211
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.....
T Consensus 161 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~ 213 (328)
T cd07856 161 ---------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN 213 (328)
T ss_pred ---------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0123457889999999866 568889999999999999999999998766533
Q ss_pred HHHHHHhC--------------------------CCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001865 906 TFANILHK--------------------------DLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 906 ~~~~i~~~--------------------------~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
....+... ....+ .....+..+.++|++||+.+|++||+ +.+++.||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~ell~~~ 289 (328)
T cd07856 214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRIS----AAEALAHP 289 (328)
T ss_pred HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCC
Confidence 22221110 00111 01235678999999999999999999 99999999
Q ss_pred CcCC
Q 001865 957 FFKG 960 (1002)
Q Consensus 957 ~f~~ 960 (1002)
||..
T Consensus 290 ~~~~ 293 (328)
T cd07856 290 YLAP 293 (328)
T ss_pred cccc
Confidence 9985
No 304
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.9e-35 Score=332.99 Aligned_cols=257 Identities=30% Similarity=0.468 Sum_probs=209.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|.+.+.||+|+||.||+|.+..++..||+|.+.+... .......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3689999999999999999999999999999999876422 222345678899999999999999999998754
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...|+||||+ ..+|..++. ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 93 QDFYLVMPYM-QTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred ceEEEEeccc-ccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 3469999999 457776653 34899999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. ......|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 168 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 168 DA------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred CC------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 11 1123467889999999876 4578899999999999999999999998
Q ss_pred CChHHHHHHHHhCC-----------------------CCCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 901 KTRQKTFANILHKD-----------------------LKFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~-----------------------~~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+.... ...+. .+..+..+.+||.+||+.||.+||+ +.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~----~~e 293 (342)
T cd07879 218 KDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT----ATE 293 (342)
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC----HHH
Confidence 77655554443210 00000 1235677899999999999999999 999
Q ss_pred HHcCCCcCCCChh
Q 001865 952 IKKHPFFKGVNWA 964 (1002)
Q Consensus 952 lL~Hp~f~~~~~~ 964 (1002)
++.||||+.+...
T Consensus 294 ~l~h~~f~~~~~~ 306 (342)
T cd07879 294 ALEHPYFDSFRDA 306 (342)
T ss_pred HhcCcchhhcccc
Confidence 9999999997654
No 305
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-34 Score=318.08 Aligned_cols=254 Identities=23% Similarity=0.325 Sum_probs=208.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
...+|++.+.||+|+||.||+|.+..++ ..+|+|.++... .......+.+|+.+++.++||||+++++++..++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP 79 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 3468999999999999999999986544 379999987542 23345678889999999999999999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++|+||||+|||++.++.++|+|||++.....
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999999997653 4589999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
..... .......++..|+|||++.+..++.++|+|||||++|++++ |..||.+..
T Consensus 159 ~~~~~------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~ 214 (267)
T cd05066 159 DPEAA------------------------YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS 214 (267)
T ss_pred cccee------------------------eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC
Confidence 11000 00111234568999999998889999999999999999886 999998877
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.......+... ...+.....+..+.+|+.+||+.+|.+||++.++
T Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 259 (267)
T cd05066 215 NQDVIKAIEEG-YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQI 259 (267)
T ss_pred HHHHHHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHH
Confidence 76666666544 3444445578889999999999999999994443
No 306
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.7e-34 Score=314.14 Aligned_cols=245 Identities=22% Similarity=0.339 Sum_probs=207.4
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||.|+||.||+|.. .++.+|+|.++... .....+.+|+.+++.++|+||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDS----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccch----hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 4567899999999999999999987 47899999987542 14567889999999999999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+++++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~- 155 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG- 155 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc-
Confidence 9999999999999998765456999999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
.....++..|+|||++....++.++||||||+++|+|++ |..||......
T Consensus 156 -----------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 206 (256)
T cd05039 156 -----------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred -----------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 001234567999999988888999999999999999997 99999888766
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.....+... .........+..+.+||.+||..+|++||++.+
T Consensus 207 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 248 (256)
T cd05039 207 DVVPHVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQ 248 (256)
T ss_pred HHHHHHhcC-CCCCCccCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 665555443 222333446789999999999999999999443
No 307
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6.5e-35 Score=332.31 Aligned_cols=254 Identities=27% Similarity=0.424 Sum_probs=208.4
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|.+.+.||+|+||.||++.+..+++.||+|++.+.. ........+.+|+.++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 478999999999999999999999999999999987642 2233345677899999999999999999988643
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...|++++++ +++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence 4578999988 8899888764 34899999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. ......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||..
T Consensus 171 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 171 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cc------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 11 1123467889999999866 4678899999999999999999999987
Q ss_pred CChHHHHHHHHhCCC-----------------------CCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 901 KTRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~-----------------------~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+..... ..+. ....+..+.+||.+||+.||.+||+ +.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e 296 (345)
T cd07877 221 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQ 296 (345)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCC----HHH
Confidence 665554444332110 0000 1124678899999999999999999 999
Q ss_pred HHcCCCcCC
Q 001865 952 IKKHPFFKG 960 (1002)
Q Consensus 952 lL~Hp~f~~ 960 (1002)
++.||||+.
T Consensus 297 ~l~h~~f~~ 305 (345)
T cd07877 297 ALAHAYFAQ 305 (345)
T ss_pred HhcChhhhh
Confidence 999999996
No 308
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.5e-34 Score=317.47 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=204.1
Q ss_pred ccccccccccCcEEEEEEEEcCCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee------CC
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------KT 742 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~ 742 (1002)
|.+.+.||+|+||.||++.+..++. .+|+|.++.. .........+..|+.+++.++|+||+++++++.. ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIA-ICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccC-cCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 4567889999999999999877765 6999988754 2344556778899999999999999999987642 23
Q ss_pred eEEEEEeccCCCchhHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001865 743 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
..+++|||+.+++|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887421 2235899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~P 897 (1002)
..+..... ........+++.|++||++.+..++.++|||||||++|+|++ |..|
T Consensus 160 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p 214 (272)
T cd05075 160 KKIYNGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214 (272)
T ss_pred cccCcccc-------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence 65431100 001122346778999999999889999999999999999998 8999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|.+.........+..+.. .+.....+..+.++|.+||..||++||| +.+|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~ 266 (272)
T cd05075 215 YPGVENSEIYDYLRQGNR-LKQPPDCLDGLYSLMSSCWLLNPKDRPS----FETLRC 266 (272)
T ss_pred CCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 998877777666655432 2333456788999999999999999999 566553
No 309
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.2e-34 Score=314.64 Aligned_cols=254 Identities=28% Similarity=0.453 Sum_probs=218.0
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 58899999999999999999999999999999876533 23445677889999999999999999999999999999999
Q ss_pred ccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 750 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|+++++|..++... ....+++..+..++.|++.||+|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 99999999998652 2346899999999999999999999999999999999999999999999999998554211
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.....
T Consensus 157 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~ 210 (256)
T cd08530 157 --------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR 210 (256)
T ss_pred --------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111235788999999999988899999999999999999999999988877666
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+....... .....+..+.+++.+||..+|++||+ +.++++||++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~p~~ 256 (256)
T cd08530 211 YKVQRGKYPP-IPPIYSQDLQNFIRSMLQVKPKLRPN----CDKILASPAV 256 (256)
T ss_pred HHHhcCCCCC-CchhhCHHHHHHHHHHcCCCcccCCC----HHHHhcCCCC
Confidence 6665544332 22356788999999999999999999 9999999985
No 310
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.2e-35 Score=331.23 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=204.7
Q ss_pred cccCCccccccccccCcEEEEEEEE-----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEe
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 739 (1002)
+..++|++.+.||.|+||.||+|.+ ..+++.||||.++... .......+.+|+.++..+ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 4567899999999999999999985 3457899999997542 233456788899999999 6899999999876
Q ss_pred e-CCeEEEEEeccCCCchhHHHhhCC------------------------------------------------------
Q 001865 740 T-KTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (1002)
Q Consensus 740 ~-~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 764 (1002)
. +..+|+|||||++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 457899999999999999986421
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 765 -----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 765 -----------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------ 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------ 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch------
Confidence 123678888999999999999999999999999999999999999999999998553211100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~ 912 (1002)
.......+++.|+|||++.+..++.++||||||+++|+|++ |..||.+..........+.
T Consensus 236 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 296 (343)
T cd05103 236 -------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 296 (343)
T ss_pred -------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh
Confidence 01112345678999999988889999999999999999996 9999987654333333333
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.....+.....+..+.+++..||+.||++||+ +.+|++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps----~~eil~~ 335 (343)
T cd05103 297 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 335 (343)
T ss_pred ccCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 33333333346778999999999999999999 7777654
No 311
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.8e-34 Score=313.91 Aligned_cols=248 Identities=22% Similarity=0.339 Sum_probs=207.1
Q ss_pred ccccccCcEEEEEEEEcC-CC--eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEecc
Q 001865 675 KPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~-~~--~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
+.||+|++|.||++.+.. .+ ..+|+|.+...... .....+.+|+.++++++||||+++++++.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999865 33 36999999876432 556788899999999999999999999988 8999999999
Q ss_pred CCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 001865 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (1002)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (1002)
++++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---- 153 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---- 153 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc----
Confidence 9999999997754356899999999999999999999999999999999999999999999999998654321100
Q ss_pred chhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001865 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i 910 (1002)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus 154 --------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 213 (257)
T cd05040 154 --------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213 (257)
T ss_pred --------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 011113457788999999998889999999999999999998 99999888887777777
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
......++.....+..+.+|+.+||..+|++||+ +.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 252 (257)
T cd05040 214 DKEGERLERPEACPQDIYNVMLQCWAHNPADRPT----FAALR 252 (257)
T ss_pred HhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCC----HHHHH
Confidence 6544444444456788999999999999999999 55554
No 312
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.8e-34 Score=318.29 Aligned_cols=254 Identities=20% Similarity=0.309 Sum_probs=207.1
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+...+|++++.||.|+||+||+|.+..++. .||+|+++... .......+.+|+.+++.++||||+.+++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 456789999999999999999999877765 48999987542 34445678889999999999999999998875
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...+++|+|+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 45789999999999999987542 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 160 DIDETE-------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred ccccce-------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 321110 00112235678999999998889999999999999999998 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.........+.. ....+.....+..+.+++.+||..||++||+ +.+++
T Consensus 215 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~l~ 262 (279)
T cd05109 215 IPAREIPDLLEK-GERLPQPPICTIDVYMIMVKCWMIDSECRPR----FRELV 262 (279)
T ss_pred CCHHHHHHHHHC-CCcCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 766555544433 3333444557889999999999999999999 55555
No 313
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2e-34 Score=314.66 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=208.0
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++.+.||+|+||.||++.+. .+..+|+|.+... ......+.+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence 456789999999999999999999864 4567999988653 2245678889999999999999999999887 778
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|++|||+++++|.+++.......++...+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999999998765566899999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.. .......++..|+|||++....++.++|+|||||++|++++ |..||.+.+.
T Consensus 156 ~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 156 EY--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred Cc--------------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 00 01112245678999999988888999999999999999998 9999998877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
......+... ...+.....+..+.+++.+||+.+|++||+..+
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 252 (260)
T cd05073 210 PEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 252 (260)
T ss_pred HHHHHHHhCC-CCCCCcccCCHHHHHHHHHHcccCcccCcCHHH
Confidence 6666555443 334444557889999999999999999999443
No 314
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-34 Score=323.22 Aligned_cols=259 Identities=20% Similarity=0.299 Sum_probs=210.6
Q ss_pred cccccCCccccccccccCcEEEEEEEEc-------CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeE
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (1002)
+.+..++|.+.+.||+|+||.||+|.+. .++..+|+|.+.... .......+.+|+.+++.+ +||||++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchhee
Confidence 3456789999999999999999999752 234579999987532 234456788999999999 899999999
Q ss_pred EEEeeCCeEEEEEeccCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001865 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~N 801 (1002)
+++...+.+|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 167 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence 99999999999999999999999997532 2347888899999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDI 881 (1002)
|+++.++.+||+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 222 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDV 222 (304)
T ss_pred EEEcCCCcEEECCCccceecccccc-------------------------cccccCCCCCceeeCchhhccCCCCchhhH
Confidence 9999999999999999865421110 001122346778999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001865 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
||||+++|+|++ |..||.+.+..+....+.... .......++..+.+|+.+||..+|.+||++.+++.
T Consensus 223 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 223 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred HHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 999999999998 889998887777766665443 22333457889999999999999999999444433
No 315
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.7e-34 Score=321.77 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=204.3
Q ss_pred CCccccccccccCcEEEEEEEEcCCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
++|++.+.||.|+||.||+|.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 579999999999999999999877764 4688877632 2334456788899999999 7999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEE
Q 001865 746 LITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
+||||+++++|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999996532 13488999999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001865 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||++...... .......++..|+|||++.+..++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 160 IADFGLSRGEEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred ECCcCCCccccce----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence 9999988421100 000111235579999999988899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 892 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
++ |..||.+.+.......+..+ ...+....++..+.+|+.+||..+|.+||++.++
T Consensus 212 ~t~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 268 (297)
T cd05089 212 VSLGGTPYCGMTCAELYEKLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQI 268 (297)
T ss_pred HcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 97 99999988877777666554 2233334578899999999999999999994433
No 316
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.3e-34 Score=322.33 Aligned_cols=254 Identities=24% Similarity=0.338 Sum_probs=204.1
Q ss_pred ccCCccccccccccCcEEEEEEEEcCC--------------CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcc
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGS--------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVP 732 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~--------------~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv 732 (1002)
..++|++.+.||+|+||.||+|.+..+ ...||+|.++... .......+.+|++++++++|+||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcC
Confidence 346899999999999999999987543 2358999987542 234456788999999999999999
Q ss_pred eeEEEEeeCCeEEEEEeccCCCchhHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcE
Q 001865 733 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 733 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NI 802 (1002)
++++++...+.+|+||||+.+++|.+++.... ...++...+..++.||+.||+|||++|++|+||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999986431 12368889999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001865 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIw 882 (1002)
+++.++.+||+|||++....... .........+++.|+|||++.+..++.++|||
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 215 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASDVW 215 (295)
T ss_pred EEcCCCcEEecccccccccccCc-------------------------ceeccCcCcCceeecChhhhccCCcCchhhHH
Confidence 99999999999999985432110 00111233467889999999888899999999
Q ss_pred HHHHHHHHHHc--CCCCCCCCChHHHHHHHHh------CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 883 ALGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 883 SlGvil~ellt--G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
||||++|+|++ |..||...+....+..+.. ...........+..+.+|+.+||..+|++||++.+
T Consensus 216 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~ 288 (295)
T cd05097 216 AFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK 288 (295)
T ss_pred HHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 99999999987 7789988776666554432 11112223346788999999999999999999443
No 317
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.5e-34 Score=318.01 Aligned_cols=256 Identities=21% Similarity=0.312 Sum_probs=214.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcCC-----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
...+|++++.||.|+||.||+|..+.+ .+.+++|.+.... .......+.+|++++++++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 80 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA 80 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence 346899999999999999999997543 4679999876432 223456788999999999999999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEe
Q 001865 742 THVCLITDYCPGGELFLLLDRQPT-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~-------~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
+..|+||||+++++|.+++..... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence 999999999999999999976531 1589999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-
Q 001865 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 893 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt- 893 (1002)
||++...... .........+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 161 ~~~~~~~~~~--------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~ 214 (275)
T cd05046 161 LSLSKDVYNS--------------------------EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQ 214 (275)
T ss_pred cccccccCcc--------------------------cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence 9987532110 0011223356788999999988888899999999999999998
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 894 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|..||........+..+..+...++.....+..+.+++.+||+.+|.+||+ +.+++.
T Consensus 215 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~~l~ 271 (275)
T cd05046 215 GELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPS----FSELVS 271 (275)
T ss_pred CCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHH
Confidence 889998877777777777666666666667889999999999999999999 777765
No 318
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.4e-34 Score=322.37 Aligned_cols=262 Identities=27% Similarity=0.421 Sum_probs=211.9
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeC
Q 001865 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (1002)
...+..++|++.+.||+|+||.||+|.+..+++.||+|.+++.. .......+..|+.++..+ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 86 (296)
T cd06618 9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD 86 (296)
T ss_pred eccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecC
Confidence 34566789999999999999999999998889999999997542 223345566677766666 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
...|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||+ .||+||||+|+||+++.++.+||+|||++..
T Consensus 87 ~~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~ 164 (296)
T cd06618 87 SDVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGR 164 (296)
T ss_pred CeEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchh
Confidence 9999999999 567877776532 368999999999999999999997 5999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~----~~~~sDIwSlGvil~elltG~~ 896 (1002)
+.... ......+++.|+|||++.+.. ++.++||||||+++|+|++|+.
T Consensus 165 ~~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 216 (296)
T cd06618 165 LVDSK----------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQF 216 (296)
T ss_pred ccCCC----------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCC
Confidence 32110 011234788999999987553 7789999999999999999999
Q ss_pred CCCCCCh-HHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 897 PFRGKTR-QKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 897 Pf~~~~~-~~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
||..... .+.+..+..... ..+....++..+.+|+.+||..||.+||+ ++++++||||..
T Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~ 278 (296)
T cd06618 217 PYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK----YRELLQHPFIRR 278 (296)
T ss_pred CCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhc
Confidence 9976433 344445554432 23333346788999999999999999999 999999999986
No 319
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.9e-34 Score=325.20 Aligned_cols=260 Identities=25% Similarity=0.380 Sum_probs=206.4
Q ss_pred CccccccccccCcEEEEEEEEcCC--CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEee----CC
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----KT 742 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~----~~ 742 (1002)
+|++.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++++ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 8899999987532 2233345677899999999 69999999987532 25
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|++|+|+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 689999999 57899888653 458999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
..... .........|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus 157 ~~~~~-----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 157 ENPGE-----------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred ccccc-----------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 11100 0011234578999999998765 46788999999999999999999999876
Q ss_pred ChHHHHHHHHhCC----------------------------CCCC-CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 902 TRQKTFANILHKD----------------------------LKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~~~~~~~~i~~~~----------------------------~~~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+....+..++... ..+. .....+..+.+|+.+||+.||.+||| +.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~l 289 (332)
T cd07857 214 DYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRIS----VEEA 289 (332)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCC----HHHH
Confidence 6544433322210 0000 11234678999999999999999999 9999
Q ss_pred HcCCCcCC
Q 001865 953 KKHPFFKG 960 (1002)
Q Consensus 953 L~Hp~f~~ 960 (1002)
+.||||+.
T Consensus 290 l~~~~~~~ 297 (332)
T cd07857 290 LEHPYLAI 297 (332)
T ss_pred hcChhhhh
Confidence 99999975
No 320
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2e-34 Score=326.90 Aligned_cols=273 Identities=25% Similarity=0.336 Sum_probs=212.9
Q ss_pred CCccc-cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChH-----------HHHHHHHHHHHHHhCCCCCcceeEE
Q 001865 669 QHFRP-IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------KVHRACAEREILDMLDHPFVPALYA 736 (1002)
Q Consensus 669 ~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~hpnIv~l~~ 736 (1002)
++|.. .+.||.|+||.||+|.+..+++.||+|+++........ ....+.+|+.+++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 56764 57799999999999999999999999998754322110 0124678999999999999999999
Q ss_pred EEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001865 737 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
++...+..|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 9999999999999994 7899998753 458999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCC
Q 001865 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~ 895 (1002)
++.....+........ .. ............+++.|+|||.+.+. .++.++|||||||++|+|++|.
T Consensus 165 ~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 165 LARRYGYPPYSDTLSK---------DE----TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ceeecccccccccccc---------cc----cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9866542211100000 00 00001112234578899999998764 4688999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCC--C---CCCC---------------------CCCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001865 896 TPFRGKTRQKTFANILHKD--L---KFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~--~---~~~~---------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
+||.+.+....+..+.... . .++. ....+..+.+||.+||..+|++||+ +
T Consensus 232 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~ 307 (335)
T PTZ00024 232 PLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS----A 307 (335)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC----H
Confidence 9999888776665554310 0 0100 1224677899999999999999999 9
Q ss_pred HHHHcCCCcCCC
Q 001865 950 NEIKKHPFFKGV 961 (1002)
Q Consensus 950 ~elL~Hp~f~~~ 961 (1002)
+++|.||||+..
T Consensus 308 ~~~l~~~~~~~~ 319 (335)
T PTZ00024 308 KEALKHEYFKSD 319 (335)
T ss_pred HHHhcCcccCCC
Confidence 999999999975
No 321
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.7e-34 Score=318.87 Aligned_cols=251 Identities=21% Similarity=0.307 Sum_probs=205.0
Q ss_pred CccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 47889999999999999998753 23578999887542 234456788999999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcE
Q 001865 745 CLITDYCPGGELFLLLDRQ----------------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~----------------------~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NI 802 (1002)
|+||||+.+++|.+++... ....++...+..++.|++.||+|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999998642 123478999999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001865 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.++.+||+|||++........ ........++..|+|||++.+..++.++|||
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 213 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSKGRIPVKWMAIESLFDHIYTTQSDVW 213 (290)
T ss_pred EEcCCCcEEeccccccccccCccc-------------------------hhcccCCCCCccccCHHHHccCCcchHhHHH
Confidence 999999999999999864321110 0011223456789999999888899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|||+++|+|++ |..||.+.........+. .....+.....+..+.+|+.+||+.+|++||++.++
T Consensus 214 slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i 279 (290)
T cd05045 214 SFGVLLWEIVTLGGNPYPGIAPERLFNLLK-TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADI 279 (290)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 99999999998 999998887766555443 333444445578899999999999999999994443
No 322
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.3e-34 Score=324.39 Aligned_cols=268 Identities=26% Similarity=0.377 Sum_probs=208.6
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++.+.||+|+||.||+|.+..+++.+|+|.+....... .....+.+|+++++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 579999999999999999999999999999999987543222 1223557899999999999999999887533
Q ss_pred --CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001865 742 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 742 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
..+|+||||+ +++|...+... ...+++..++.++.||+.||.|||++||+|+||||+||++++++.++|+|||++.
T Consensus 86 ~~~~~~lv~~~~-~~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYM-DHDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecC-CcCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 3579999999 55677766543 3469999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.......... ..............|++.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus 164 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 164 PYDGPPPNPK----------------GGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred hccCCCcccc----------------cCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 5432211000 0000011123445789999999988654 5788999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCC-----C------C---------C--------CCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001865 899 RGKTRQKTFANILHKDLK-----F------P---------S--------STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~-----~------~---------~--------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
.+.+.......+...... + + . ....+..+.+||.+||..||.+||| +.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~ 303 (311)
T cd07866 228 QGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLT----AS 303 (311)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcC----HH
Confidence 988776655554431000 0 0 0 0123456789999999999999999 99
Q ss_pred HHHcCCCc
Q 001865 951 EIKKHPFF 958 (1002)
Q Consensus 951 elL~Hp~f 958 (1002)
+++.||||
T Consensus 304 ell~~~~f 311 (311)
T cd07866 304 DALEHPYF 311 (311)
T ss_pred HHhcCCCC
Confidence 99999998
No 323
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3e-34 Score=316.83 Aligned_cols=253 Identities=20% Similarity=0.294 Sum_probs=202.2
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+..++|++++.||.|+||.||+|.+..++. .+++|.+... ........+..|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~- 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG- 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-
Confidence 345689999999999999999999977776 4677766432 123344567788889999999999999998754
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...++++||+++|+|.+++.... ..+++..+..++.||+.||.|||++|++|+||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 56789999999999999997643 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 160 YPDDKK-------------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred cCCCcc-------------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 211100 01123457788999999988889999999999999999998 9999988
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.........+ ......+....++..+.+++.+||..||++|||+.++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el 261 (279)
T cd05111 215 MRPHEVPDLL-EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKEL 261 (279)
T ss_pred CCHHHHHHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 7665544444 3333333333467788999999999999999994443
No 324
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.2e-34 Score=319.15 Aligned_cols=253 Identities=21% Similarity=0.303 Sum_probs=208.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcC-----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..++|++++.||+|+||.||+|.+.. ++..+|+|+++... .......+.+|+.+++.++||||+++++++..+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 45689999999999999999999743 57899999987542 234456788899999999999999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001865 742 THVCLITDYCPGGELFLLLDRQP--------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~--------------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~N 801 (1002)
+..|+||||+++++|.+++.... ...+++..++.++.||+.||+|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999997431 1247888999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDI 881 (1002)
|+++.++.++|+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY-------------------------YKASENDAIPIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred eEecCCCceEECccccceecccCcc-------------------------ccccCCCccChhhcCHHHHhcCCCCchhHH
Confidence 9999999999999998854321100 011112235677999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
|||||++|+|++ |..||.+.+..+....+..+... +.....+..+.+||.+||+.+|++||++.+
T Consensus 216 ~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL-SCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 999999999997 88999888877777766655432 223346788999999999999999999444
No 325
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2e-34 Score=318.49 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=209.6
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--CeEEEEE
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLIT 748 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lV~ 748 (1002)
|++++.||.|+||.||+|.+..+++.+|+|.+.... ........+.+|+.+++.++|+|++++++++... +..|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 678899999999999999999999999999998653 2333445678899999999999999999999987 8999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++ ++|..++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred cccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9995 58988886542 4689999999999999999999999999999999999999999999999999865432110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+....+
T Consensus 156 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~ 211 (287)
T cd07840 156 ------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL 211 (287)
T ss_pred ------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01122356888999998765 45788999999999999999999999887766655
Q ss_pred HHHHhCCC-----CCCCC-----------------------CC-CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 908 ANILHKDL-----KFPSS-----------------------TP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~-----~~~~~-----------------------~~-~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+..... .++.. .. ++..+.+++.+||..+|.+||+ +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~~~~ 287 (287)
T cd07840 212 EKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRIS----ADQALQHEYF 287 (287)
T ss_pred HHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcC----HHHHhhCcCC
Confidence 55543110 00000 01 2778899999999999999999 9999999997
No 326
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.5e-34 Score=312.03 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=201.1
Q ss_pred ccccccCcEEEEEEEEcCCC---eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEecc
Q 001865 675 KPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
+.||+|+||.||+|.+..++ ..+|+|.+...... .....+.+|+.+++.++||||+++++++. .+.+++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999875554 78999998765432 34567888999999999999999999876 45689999999
Q ss_pred CCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 001865 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (1002)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (1002)
++++|.+++.... .+++..+..++.|++.||+|||.+|++|+||||+|||++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~---- 151 (257)
T cd05060 78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY---- 151 (257)
T ss_pred CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc----
Confidence 9999999998753 5899999999999999999999999999999999999999999999999998654311100
Q ss_pred chhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001865 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i 910 (1002)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus 152 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05060 152 --------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML 211 (257)
T ss_pred --------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 001111234568999999998889999999999999999997 99999887776666555
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
.... ..+....++..+.+||.+||..+|++||++.++++.+
T Consensus 212 ~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l 252 (257)
T cd05060 212 ESGE-RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTF 252 (257)
T ss_pred HcCC-cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 4432 3344445778899999999999999999955443333
No 327
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.8e-34 Score=314.65 Aligned_cols=254 Identities=22% Similarity=0.300 Sum_probs=209.2
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
..+.|+..+.||+|+||.||+|.+..++. .+|+|.++... .......+.+|+++++.++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 34578999999999999999999876654 79999886542 23345678899999999999999999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+++++|.+++.... ..++...+..++.|++.||+|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999987643 4589999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
..... ........++.|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 160 ~~~~~------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~ 215 (268)
T cd05063 160 DPEGT------------------------YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS 215 (268)
T ss_pred ccccc------------------------eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC
Confidence 11100 00111223567999999988888999999999999999997 999998887
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
..+....+... ...+.....+..+.+|+.+||..+|++||++.++
T Consensus 216 ~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i 260 (268)
T cd05063 216 NHEVMKAINDG-FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDI 260 (268)
T ss_pred HHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 77776666543 3445555578889999999999999999994443
No 328
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.6e-34 Score=328.14 Aligned_cols=263 Identities=28% Similarity=0.417 Sum_probs=211.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeC--CeE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~--~~~ 744 (1002)
.++|++.+.||+|+||.||+|.+..++..+|+|.+.+.. ........+.+|+.+++++ +||||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 468999999999999999999998899999999886532 2333445677899999999 999999999998653 468
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+. ++|..++... .+++..++.++.||+.||+|||++||+|+||||+||+++.+|.+||+|||++......
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999995 6999888653 5888999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.... .........|++.|+|||++.+ ..++.++||||||+++|+|++|+.||.+...
T Consensus 161 ~~~~----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~ 218 (337)
T cd07852 161 EENP----------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST 218 (337)
T ss_pred cccc----------------------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh
Confidence 1100 0011223568999999998865 4577899999999999999999999987665
Q ss_pred HHHHHHHHhCCCC-----------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 904 QKTFANILHKDLK-----------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~-----------------------------~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......+...... .......+..+.+||.+||+.+|++||| +.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps----~~~il~ 294 (337)
T cd07852 219 LNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLT----AEEALE 294 (337)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccC----HHHHhh
Confidence 5544433221100 0011225778999999999999999999 999999
Q ss_pred CCCcCCC
Q 001865 955 HPFFKGV 961 (1002)
Q Consensus 955 Hp~f~~~ 961 (1002)
||||+.+
T Consensus 295 ~~~~~~~ 301 (337)
T cd07852 295 HPYVAQF 301 (337)
T ss_pred Chhhhhh
Confidence 9999985
No 329
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3e-34 Score=322.48 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=207.6
Q ss_pred cccccCCccccccccccCcEEEEEEEEcC-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeE
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (1002)
+.+..++|.+.+.||+|+||.||+|.+.. ....+|+|.++... .......+.+|+.+++.+ +||||++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 34556789999999999999999998632 34579999987532 234456788899999999 699999999
Q ss_pred EEEeeCCeEEEEEeccCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCc
Q 001865 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~N 801 (1002)
+++...+.+|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 99999999999999999999999997532 2358889999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhH
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDI 881 (1002)
||++.++.+||+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 219 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDY-------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSDV 219 (314)
T ss_pred EEEcCCCcEEEcccccccccccccc-------------------------ccccccCCCCccccCHHHHccCCcCccchh
Confidence 9999999999999999865321100 000111234568999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
|||||++|+|++ |..||.+......+..+.... .......++..+.+|+.+||..+|++||++.+
T Consensus 220 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 285 (314)
T cd05099 220 WSFGILMWEIFTLGGSPYPGIPVEELFKLLREGH-RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQ 285 (314)
T ss_pred hHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 999999999998 999998887777666665543 22223456788999999999999999999443
No 330
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.4e-34 Score=320.43 Aligned_cols=256 Identities=25% Similarity=0.354 Sum_probs=204.9
Q ss_pred cCCccccccccccCcEEEEEEEEcC----------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 731 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 731 (1002)
.++|++.+.||+|+||.||+|.+.. ++..+|+|.++... .......+.+|+.+++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 4579999999999999999986532 34579999987542 33445678899999999999999
Q ss_pred ceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcE
Q 001865 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPT---------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NI 802 (1002)
+++++++...+..|+||||+.+++|.+++..... ..++...+..++.||+.||+|||++||+|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999999999999999999999999999875321 2477789999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHH
Q 001865 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.++.++|+|||++..+..... ........+++.|++||++.+..++.++|||
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY-------------------------YRIQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc-------------------------eeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 999999999999999864321100 0111223456789999998888899999999
Q ss_pred HHHHHHHHHHc--CCCCCCCCChHHHHHHHHh------CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001865 883 ALGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 883 SlGvil~ellt--G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
||||++|+|++ |..||...+..+.+..... .....+....++..+.+|+.+||+.||.+||++.++++
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999997 7899987766665544321 11223344456788999999999999999999544433
No 331
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1e-34 Score=317.04 Aligned_cols=250 Identities=30% Similarity=0.445 Sum_probs=203.2
Q ss_pred cccccccccCcEEEEEEEEc----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 672 RPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.+.||.|.||.||+|.+. ..+..|+||.++.. ........+.+|++++++++||||+++++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 35678999999999999997 34678999999542 2344578899999999999999999999999988889999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||++|+|.+++.......++...+..++.||+.||.|||+++|+|+||+|+||++++++.+||+|||++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999999999886456699999999999999999999999999999999999999999999999999865421100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
........+...|+|||.+....++.++||||||+++|||++ |+.||...+..+.
T Consensus 159 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~ 214 (259)
T PF07714_consen 159 ------------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI 214 (259)
T ss_dssp ------------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred ------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011223457788999999988889999999999999999999 7899999888887
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+... ...+....++..+.++|..||..+|++||+ +.+|+
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~li~~C~~~~p~~RPs----~~~i~ 256 (259)
T PF07714_consen 215 IEKLKQG-QRLPIPDNCPKDIYSLIQQCWSHDPEKRPS----FQEIL 256 (259)
T ss_dssp HHHHHTT-EETTSBTTSBHHHHHHHHHHT-SSGGGS------HHHHH
T ss_pred ccccccc-ccceeccchhHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 7777444 333444457889999999999999999999 55554
No 332
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.8e-34 Score=321.95 Aligned_cols=259 Identities=25% Similarity=0.353 Sum_probs=208.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC----
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (1002)
..++|++.+.||+|+||.||++.++.+++.||+|.++.... .......+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35789999999999999999999999999999999875422 2223346678999999999999999999887654
Q ss_pred ------eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001865 743 ------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 743 ------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
.+|+||||+++ +|..++... ...+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 89999999955 777777654 3458999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCC
Q 001865 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~ 895 (1002)
++........ .......++..|+|||++.+. .++.++|||||||++|+|++|+
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 162 LARLYNSEES--------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred ccccccCCcc--------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9865432110 011123467889999988653 5688999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhC---CC--CCC-----------------------CCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 896 TPFRGKTRQKTFANILHK---DL--KFP-----------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~---~~--~~~-----------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+||...+....+..+... .. .++ .....+..+.+||.+||..+|.+||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~--- 292 (302)
T cd07864 216 PIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT--- 292 (302)
T ss_pred CCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC---
Confidence 999877766555544431 00 000 11235778999999999999999999
Q ss_pred cHHHHHcCCCc
Q 001865 948 GANEIKKHPFF 958 (1002)
Q Consensus 948 ~a~elL~Hp~f 958 (1002)
+.+++.||||
T Consensus 293 -~~~il~~~~~ 302 (302)
T cd07864 293 -AEEALNSPWL 302 (302)
T ss_pred -HHHHhcCCCC
Confidence 9999999997
No 333
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.3e-34 Score=319.64 Aligned_cols=254 Identities=28% Similarity=0.490 Sum_probs=211.1
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|++.+.||.|++|.||+|.+..+++.+++|.+..... .......+.+|+.+++.++|+||+++++++..++.+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999998999999999876532 223456778899999999999999999999999999999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+. ++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 80 MD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred cC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 95 58888886643 468999999999999999999999999999999999999999999999999885543211
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.+.+..+.+..
T Consensus 153 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~ 210 (283)
T cd05118 153 ----------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK 210 (283)
T ss_pred ----------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011223578899999998776 688899999999999999999999988877665555
Q ss_pred HHhCCC-------------------CCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 910 ILHKDL-------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~-------------------~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..... .++. ....+..+.+||.+||..||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~ll~~~~~ 283 (283)
T cd05118 211 IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT----AEQALAHPYF 283 (283)
T ss_pred HHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcC----HHHHhhCCCC
Confidence 432100 0000 1225678899999999999999999 9999999997
No 334
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.8e-34 Score=314.92 Aligned_cols=257 Identities=23% Similarity=0.324 Sum_probs=210.7
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+.|++.+.||+|+||.||+|.+..+++ .||+|+++... .......+..|+.+++.++||||+++++++..+...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4579999999999999999999877664 69999987542 344567789999999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
++||||+.+++|.+++.... ..++...++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999987643 45899999999999999999999999999999999999999999999999998654221
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.... .........++..|+|||++.+..++.++|||||||++|++++ |..||...+.
T Consensus 160 ~~~~----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~ 217 (269)
T cd05065 160 TSDP----------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 217 (269)
T ss_pred cccc----------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH
Confidence 1000 0000011123467999999998889999999999999999886 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......+.. ....+....++..+.+++.+||..+|.+||+ +++++.
T Consensus 218 ~~~~~~i~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 263 (269)
T cd05065 218 QDVINAIEQ-DYRLPPPMDCPTALHQLMLDCWQKDRNARPK----FGQIVS 263 (269)
T ss_pred HHHHHHHHc-CCcCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 776666543 3444444557888999999999999999999 666653
No 335
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-34 Score=325.59 Aligned_cols=263 Identities=21% Similarity=0.305 Sum_probs=211.6
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCC-------CeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcce
Q 001865 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPA 733 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~ 733 (1002)
+.+.+...+|++++.||+|+||.||+|.+... +..+|+|.++.. ........+.+|+.+++++ +||||++
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIIN 82 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence 34556677899999999999999999986432 236899988743 2334456788999999999 8999999
Q ss_pred eEEEEeeCCeEEEEEeccCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCC
Q 001865 734 LYASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKP 799 (1002)
Q Consensus 734 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP 799 (1002)
+++++...+.+|++|||+.+++|.+++.... ...++...+..++.||+.||+|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 9999999999999999999999999987532 23478888999999999999999999999999999
Q ss_pred CcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChh
Q 001865 800 ENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAV 879 (1002)
Q Consensus 800 ~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~s 879 (1002)
+|||++.++.+||+|||+++....... ........++..|+|||++.+..++.++
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 217 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQS 217 (334)
T ss_pred ceEEEcCCCcEEECCcccceecccccc-------------------------cccccCCCcCceEcCHHHhccCCcCchh
Confidence 999999999999999999865321100 0011122345789999999998899999
Q ss_pred hHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 880 DWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 880 DIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
|||||||++|+|++ |..||.+.+..+....+... ...+.....+..+.+|+.+||..+|++||++.+++..+
T Consensus 218 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 218 DVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 99999999999998 89999988777776666543 23333345678899999999999999999954444433
No 336
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=317.74 Aligned_cols=267 Identities=28% Similarity=0.468 Sum_probs=222.5
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC----hHHHHHHHHHHHHHHhCCCCCcceeEEEEe-eCC
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN----RNKVHRACAEREILDMLDHPFVPALYASFQ-TKT 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~ 742 (1002)
.++|-++..||+|||+.||+|.|....+++|||+-.....-. .+..+..++|..|-+.|+||.||++|++|. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 578999999999999999999999999999999875432211 222345678999999999999999999997 567
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--CcccCCCCCCcEEEec---CCcEEEEeccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG---NGHVSLTDFDL 817 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~--gIiHrDLKP~NILl~~---~g~vkL~DFG~ 817 (1002)
.+|-|+|||+|.+|..||+.. +.+++..++.|+.||+.||.||... .|||-||||.|||+.+ -|.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 899999999999999999875 6799999999999999999999976 6999999999999974 36799999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC----CCCChhhHHHHHHHHHHHHc
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~----~~~~~sDIwSlGvil~ellt 893 (1002)
+.++..++... ...........||.+|++||.+.-+ ..+.++||||+|||+|.++.
T Consensus 620 SKIMdddSy~~--------------------vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY 679 (775)
T KOG1151|consen 620 SKIMDDDSYNS--------------------VDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY 679 (775)
T ss_pred hhhccCCccCc--------------------ccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc
Confidence 99987554321 2233455667899999999998543 35679999999999999999
Q ss_pred CCCCCCCCChH-HHHH--HHH-hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 894 GYTPFRGKTRQ-KTFA--NIL-HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 894 G~~Pf~~~~~~-~~~~--~i~-~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
|+-||...... +++. .|+ .....||.-+..+.++++||++||.+.-+.|+. +.+|-.||||..
T Consensus 680 GrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~D----V~qLA~dpyllP 746 (775)
T KOG1151|consen 680 GRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRID----VQQLACDPYLLP 746 (775)
T ss_pred cCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhh----HHHHccCccccc
Confidence 99999765332 2221 222 345678888889999999999999999999999 999999999986
No 337
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.7e-34 Score=314.95 Aligned_cols=256 Identities=29% Similarity=0.463 Sum_probs=212.5
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc--ChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|+.+++.++||||+++++++......|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 588999999999999999999888777888877653322 122344566789999999999999999999999999999
Q ss_pred EeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 748 TDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
|||+++++|.+++.. .....+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999999998864 23456999999999999999999999999999999999999974 679999999885432110
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus 160 ---------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~ 212 (260)
T cd08222 160 ---------------------------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212 (260)
T ss_pred ---------------------------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 11223468889999999988888889999999999999999999998877766
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
....+..+..+. .....+..+.++|.+||..+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 260 (260)
T cd08222 213 VVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPS----AAEILRNPFI 260 (260)
T ss_pred HHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcC----HHHHhhCCCC
Confidence 666665543222 22346788999999999999999999 9999999997
No 338
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.4e-34 Score=315.98 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=196.0
Q ss_pred CCc-cccccccccCcEEEEEEE----EcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--C
Q 001865 669 QHF-RPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (1002)
Q Consensus 669 ~~y-~i~~~LG~G~~g~Vy~a~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 741 (1002)
++| ++++.||+|+||+||++. ...++..+|+|+++... .......+.+|+++++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 345 999999999999998865 33567899999987542 22345667889999999999999999998765 4
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+.+++|.+++... .+++..++.++.|++.||.|||++||+|+||||+|||++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 4689999999999999999763 4899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
...... ........++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 158 ~~~~~~------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 213 (283)
T cd05080 158 PEGHEY------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSP 213 (283)
T ss_pred CCcchh------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCC
Confidence 311100 00111234567799999998888899999999999999999999998643
Q ss_pred ChH--------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 902 TRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 902 ~~~--------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
... .............+....++..+.+|+.+||..+|++||++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~ 273 (283)
T cd05080 214 PKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRS 273 (283)
T ss_pred cchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHH
Confidence 211 0111111122223334456789999999999999999999443
No 339
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=332.11 Aligned_cols=244 Identities=34% Similarity=0.520 Sum_probs=207.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
....|.+...+|.|+||.|-.+.+..+++.+++|++.+.. ....+|+.++... +||||+++++.+.++.+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 3678999999999999999999999999999999998652 2334566565554 8999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEE-ecCCcEEEEeccCCcccCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl-~~~g~vkL~DFG~a~~~~~~ 824 (1002)
+|||++.|+-|.+.+...+. +. ..+..|+.+|+.+|.|||.+|||||||||+|||+ ++.|+++|+|||.++....+
T Consensus 393 ~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999999999888876432 33 6777899999999999999999999999999999 58999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
..+.|-|..|.|||++....|+.+|||||||++||+|++|+.||......
T Consensus 470 ------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 470 ------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred ------------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 22446789999999999999999999999999999999999999876555
Q ss_pred -HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 905 -KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 905 -~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
++...+....+. ..+|..+++||++||+.||.+|++ +.+++.||||
T Consensus 520 ~ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~dP~~Rl~----~~~i~~h~w~ 566 (612)
T KOG0603|consen 520 IEIHTRIQMPKFS----ECVSDEAKDLLQQLLQVDPALRLG----ADEIGAHPWF 566 (612)
T ss_pred HHHHHhhcCCccc----cccCHHHHHHHHHhccCChhhCcC----hhhhccCcch
Confidence 444444333222 458999999999999999999999 9999999999
No 340
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.2e-34 Score=311.77 Aligned_cols=243 Identities=21% Similarity=0.351 Sum_probs=203.0
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|+||.||++.. +++.+|+|.++... ....+.+|+.+++.++|||++++++++..+ ..|
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 74 (254)
T cd05083 3 LNLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLY 74 (254)
T ss_pred ccHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcE
Confidence 3456899999999999999999875 78889999986532 235678899999999999999999998765 479
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 75 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 75 IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred EEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 9999999999999998765556899999999999999999999999999999999999999999999999988532100
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
......+..|+|||.+.+..++.++|+|||||++|+|++ |+.||...+..
T Consensus 154 -----------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 204 (254)
T cd05083 154 -----------------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK 204 (254)
T ss_pred -----------------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH
Confidence 011234567999999988889999999999999999997 99999988777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+....+..+ ...+.....+..+.+|+.+||..+|++||++.+
T Consensus 205 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 246 (254)
T cd05083 205 EVKECVEKG-YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHK 246 (254)
T ss_pred HHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 666655543 333333456889999999999999999999443
No 341
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-35 Score=349.30 Aligned_cols=273 Identities=27% Similarity=0.414 Sum_probs=210.4
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC-----
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 741 (1002)
...+|+.+..||+||||.||+|+++-+|+.||||.+.... .......+.+|+.+|.+|+|||||++|..+.+.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3568999999999999999999999999999999987653 556678899999999999999999998432000
Q ss_pred --------------------------------------------------------------------------------
Q 001865 742 -------------------------------------------------------------------------------- 741 (1002)
Q Consensus 742 -------------------------------------------------------------------------------- 741 (1002)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 001865 742 ----------------------------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 787 (1002)
Q Consensus 742 ----------------------------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~L 787 (1002)
..+||-||||+..+|.+++.++.... .....+.+++||++||+|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 12799999999999998888754321 4678899999999999999
Q ss_pred HHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccc
Q 001865 788 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAP 867 (1002)
Q Consensus 788 H~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aP 867 (1002)
|++|||||||||.||++++++.|||+|||+|+......... + ........-...+....++.+||..|+||
T Consensus 714 H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~----d-----~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESI----D-----QDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhH----h-----hccCccccccCCCCcccccccceeeeecH
Confidence 99999999999999999999999999999996521000000 0 00000000011222345678999999999
Q ss_pred ccccCCC---CCChhhHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHHHhCCCCCC---CCCCCCHHHHHHHHHccccCcC
Q 001865 868 EIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGK-TRQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPK 940 (1002)
Q Consensus 868 E~l~~~~---~~~~sDIwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~ 940 (1002)
|++.+.. |+.++|+||||++++||+. ||... ....++.++..+.++.+ ... .-+.-..+|+.||+.||+
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~-~~~~e~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDP-EHPEEASLIRWLLSHDPS 860 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccc-cchHHHHHHHHHhcCCCc
Confidence 9997654 8999999999999999997 56543 34455555555555555 222 223456899999999999
Q ss_pred CCCCChhcHHHHHcCCCcC
Q 001865 941 SRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 941 ~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+||| |.|||++.||-
T Consensus 861 kRPt----A~eLL~s~llp 875 (1351)
T KOG1035|consen 861 KRPT----ATELLNSELLP 875 (1351)
T ss_pred cCCC----HHHHhhccCCC
Confidence 9999 99999999987
No 342
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.8e-34 Score=316.68 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=202.4
Q ss_pred CCccccccccccCcEEEEEEEE----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC--C
Q 001865 669 QHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~ 742 (1002)
.-|++++.||+|+||.||+|.. ..++..||+|.++... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4689999999999999999984 4568899999987542 334456788999999999999999999998765 6
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
..++||||++|++|.+++.... ..++...+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 7899999999999999987642 358999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
..... ........|+..|+|||++.+..++.++|||||||++|+|++++.|+....
T Consensus 161 ~~~~~------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~ 216 (284)
T cd05079 161 TDKEY------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM 216 (284)
T ss_pred cCccc------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc
Confidence 11100 011123457778999999988889999999999999999999877653211
Q ss_pred --------------hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 903 --------------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 903 --------------~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...............+....++..+.+|+.+||+.+|++||+ +.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 278 (284)
T cd05079 217 TLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT----FQNLIE 278 (284)
T ss_pred chhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 111111222233334444557889999999999999999999 666654
No 343
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=360.96 Aligned_cols=261 Identities=28% Similarity=0.480 Sum_probs=219.2
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
-+|.....||.|.||.||.|.+..+|...|+|.++-... .......+.+|..++..++|||+|++|++-.+.+.++|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~-~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS-DHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc-ccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 467777889999999999999999999999998875432 2445567788999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.+|+|.+++... ...++...+.+..|++.|++|||+.|||||||||.||+++.+|.+|++|||.|......-...
T Consensus 1314 EyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred HHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 999999999999874 558888899999999999999999999999999999999999999999999996654221000
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCCCCCh-H
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTR-Q 904 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~---~~~~~sDIwSlGvil~elltG~~Pf~~~~~-~ 904 (1002)
...-....||+.|||||++.+. +...+.|||||||+..||+||+.||...+. .
T Consensus 1392 -----------------------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~ 1448 (1509)
T KOG4645|consen 1392 -----------------------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW 1448 (1509)
T ss_pred -----------------------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh
Confidence 0122356899999999999664 456699999999999999999999987544 4
Q ss_pred HHHHHHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 905 KTFANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.++..+-.+ .+++|.. ++.+..+||..||..||..|.+ +.|||+|.|-+..
T Consensus 1449 aIMy~V~~gh~Pq~P~~--ls~~g~dFle~Cl~~dP~~Rw~----~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1449 AIMYHVAAGHKPQIPER--LSSEGRDFLEHCLEQDPKMRWT----ASQLLEHAFGKSC 1500 (1509)
T ss_pred HHHhHHhccCCCCCchh--hhHhHHHHHHHHHhcCchhhhH----HHHHHHhhccccc
Confidence 444444444 3344444 8999999999999999999999 8899999998764
No 344
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.8e-34 Score=309.17 Aligned_cols=246 Identities=21% Similarity=0.289 Sum_probs=198.5
Q ss_pred cccccCcEEEEEEEEc--CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCC
Q 001865 676 PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
.||+|+||.||++.+. .++..+|+|++.... .......+.+|+.++++++||||+++++++.. +..|+||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 4899999999999774 445679999987542 33445678899999999999999999998764 578999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ...+++..++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||++..........
T Consensus 79 ~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~----- 152 (257)
T cd05115 79 GPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY----- 152 (257)
T ss_pred CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccce-----
Confidence 9999998753 2458999999999999999999999999999999999999999999999999986432111100
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~ 912 (1002)
.......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.........+..
T Consensus 153 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 213 (257)
T cd05115 153 -------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213 (257)
T ss_pred -------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC
Confidence 00111234678999999988889999999999999999996 9999998887776665554
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001865 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
+. ..+.....+.++.+||.+||..+|++||++.++++
T Consensus 214 ~~-~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 214 GK-RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 43 22333456889999999999999999999555433
No 345
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.6e-34 Score=315.79 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=210.7
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|++.+.||+|++|.||+|.+..+++.||+|++.... ........+..|+.+++.++|+|++++++++...+..|+||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 677889999999999999999999999999998653 2233345677899999999999999999999999999999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+. ++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~----- 152 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL----- 152 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-----
Confidence 95 69999997653 359999999999999999999999999999999999999999999999999885532110
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......++..|+|||.+.+. .++.++|||||||++|+|++|..||.+.+....+..
T Consensus 153 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~ 210 (282)
T cd07829 153 ----------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFK 210 (282)
T ss_pred ----------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 011233567889999998776 788899999999999999999999988876665555
Q ss_pred HHhC------------------CCCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 910 ILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~------------------~~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+... ...++. .+..+..+.++|.+||..+|++||+ +.+++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~p~~ 282 (282)
T cd07829 211 IFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS----AKEALKHPYF 282 (282)
T ss_pred HHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC----HHHHhhCcCC
Confidence 4321 001111 1123668999999999999999999 9999999998
No 346
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.3e-34 Score=309.54 Aligned_cols=250 Identities=21% Similarity=0.332 Sum_probs=207.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..+|++.+.||.|+||.||++.+. .+..+|+|.++.... ....+.+|+++++.++|||++++++++......|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 457999999999999999999885 467899999875432 234678899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.+++|.+++.... ..+++..++.++.|++.+|+|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc--
Confidence 99999999999987543 358899999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
........++..|+|||++.+..++.++||||||+++|+|++ |..||........
T Consensus 155 ------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 210 (256)
T cd05112 155 ------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV 210 (256)
T ss_pred ------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 001112335678999999988889999999999999999998 9999988877777
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...+..+... ......+..+.+|+.+||..+|++||+ +.++++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~~l~ 253 (256)
T cd05112 211 VETINAGFRL-YKPRLASQSVYELMQHCWKERPEDRPS----FSLLLH 253 (256)
T ss_pred HHHHhCCCCC-CCCCCCCHHHHHHHHHHcccChhhCCC----HHHHHH
Confidence 7666544222 222336788999999999999999999 666654
No 347
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.8e-34 Score=312.49 Aligned_cols=256 Identities=22% Similarity=0.306 Sum_probs=209.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+...+|++.+.||+|+||.||+|.++.+|. .+|+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~- 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS- 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 345789999999999999999999876654 68999887543 24455678899999999999999999999887
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...++||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 78999999999999999997653 34899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
....... ......++..|+|||.+....++.++|||||||++|++++ |..||.+
T Consensus 160 ~~~~~~~-------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 214 (279)
T cd05057 160 DVDEKEY-------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG 214 (279)
T ss_pred cCcccce-------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCC
Confidence 3111100 0011224678999999988888999999999999999998 9999998
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
....+....+..+ ..++.....+..+.+++.+||..+|+.||++.+..+.
T Consensus 215 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~ 264 (279)
T cd05057 215 IPAVEIPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINE 264 (279)
T ss_pred CCHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 8777666555543 3344444567889999999999999999995544333
No 348
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=9e-34 Score=313.55 Aligned_cols=254 Identities=22% Similarity=0.376 Sum_probs=200.4
Q ss_pred cCCccccccccccCcEEEEEEEE----cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--C
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 741 (1002)
..+|++++.||+|+||.||++.. ..++..||+|.+... .......+.+|+++++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 45899999999999999999974 456889999998754 34455678899999999999999999998653 4
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 57899999999999999997542 35899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
...... ........++..|+|||++.+..++.++|||||||++|+|++|..|+...
T Consensus 159 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~ 214 (284)
T cd05081 159 PQDKEY------------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSP 214 (284)
T ss_pred cCCCcc------------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCc
Confidence 321100 00011123455699999999888999999999999999999988776432
Q ss_pred ChH---------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 902 TRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 902 ~~~---------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
... ..+..++.....++....++..+.+|+.+||..+|++||| +.+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~ 277 (284)
T cd05081 215 PAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPS----FSELA 277 (284)
T ss_pred chhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence 211 0111223333344444557789999999999999999999 55554
No 349
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.2e-34 Score=315.01 Aligned_cols=253 Identities=30% Similarity=0.479 Sum_probs=207.2
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCeEEEEEe
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
|++.+.||+|++|.||+|.+..+++.+++|.+..... . .......+|+..++++. |+||+++++++..++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6788999999999999999988999999999875422 1 12234457889999998 9999999999999999999999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+ +++|.+++.......+++..+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 889999987764456899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|+..|+|||++.+ ..++.++|+||||+++|+|++|++||...+....+.
T Consensus 153 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~ 209 (283)
T cd07830 153 -----------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY 209 (283)
T ss_pred -----------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence 01123467889999998854 457889999999999999999999998877665554
Q ss_pred HHHhCC-----------------C--CCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 909 NILHKD-----------------L--KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~-----------------~--~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+...- + .++. ....+..+.+||.+||+.+|++||+ +.|++.||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~~~~~ 283 (283)
T cd07830 210 KICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT----ASQALQHPYF 283 (283)
T ss_pred HHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC----HHHHhhCCCC
Confidence 443210 0 0000 0122567899999999999999999 9999999997
No 350
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.8e-33 Score=304.82 Aligned_cols=246 Identities=23% Similarity=0.352 Sum_probs=200.8
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||++.. .++..+|+|.++... .......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 3689999999999986 467899999987542 2333456888999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001865 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++.... ..+++..+..++.|++.+|.|||++|++|+||||+||+++.++.+||+|||++.......
T Consensus 78 ~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--------- 147 (250)
T cd05085 78 DFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI--------- 147 (250)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc---------
Confidence 9999987543 458899999999999999999999999999999999999999999999999985422100
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001865 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (1002)
........+++.|+|||++.+..++.++||||||+++|++++ |..||.+.........+...
T Consensus 148 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~ 210 (250)
T cd05085 148 -----------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210 (250)
T ss_pred -----------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence 000111234678999999988888999999999999999998 99999988777666665543
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
. ........+..+.+|+.+||..+|++||++.+++++
T Consensus 211 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 211 Y-RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred C-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 2 223334467899999999999999999994444333
No 351
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.2e-33 Score=307.13 Aligned_cols=251 Identities=24% Similarity=0.369 Sum_probs=210.5
Q ss_pred ccccccccccCcEEEEEEEEcCCC----eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+++.+.||.|+||.||++.+...+ ..+|+|.++... .......+..|+.+++.++|+||+++++++...+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 457789999999999999998766 899999987542 22256678899999999999999999999999999999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
+|||+++++|.+++.......+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999999765433389999999999999999999999999999999999999999999999999865432100
Q ss_pred CCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001865 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~ 905 (1002)
. ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+...
T Consensus 159 ~--------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~ 212 (258)
T smart00219 159 Y--------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE 212 (258)
T ss_pred c--------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 0 0001226789999999988888999999999999999998 899998887777
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
....+...... +.....+..+.+++.+||..+|++||| +.++++
T Consensus 213 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~ 256 (258)
T smart00219 213 VLEYLKKGYRL-PKPENCPPEIYKLMLQCWAEDPEDRPT----FSELVE 256 (258)
T ss_pred HHHHHhcCCCC-CCCCcCCHHHHHHHHHHCcCChhhCcC----HHHHHh
Confidence 77776655432 233347889999999999999999999 777765
No 352
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-33 Score=312.17 Aligned_cols=255 Identities=19% Similarity=0.213 Sum_probs=208.6
Q ss_pred cccCCccccccccccCcEEEEEEEEcC----CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee-
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCG----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 740 (1002)
+..++|++.+.||+|+||.||+|.+.. ++..+++|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456789999999999999999999866 3578999988643 244556778899999999999999999998665
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEe
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPT------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~------~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
+...+++++|+.+++|.+++..... ..+++..+..++.||+.||+|||+++++|+||||+||+++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 5788999999999999999875322 4589999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-
Q 001865 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 893 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt- 893 (1002)
||+++.+...... .......++..|+|||++.+..++.++|||||||++|++++
T Consensus 161 ~g~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 161 NALSRDLFPMDYH-------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred CCCcccccCCceE-------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC
Confidence 9998654321110 00112345778999999998889999999999999999998
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 894 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|+.||...+.......+.. ...++....++..+.+++.+||..+|++|||+.++
T Consensus 216 g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 269 (280)
T cd05043 216 GQTPYVEIDPFEMAAYLKD-GYRLAQPINCPDELFAVMACCWALDPEERPSFSQL 269 (280)
T ss_pred CCCCcCcCCHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 9999988776665544443 33444444567889999999999999999994443
No 353
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=347.53 Aligned_cols=258 Identities=21% Similarity=0.342 Sum_probs=219.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe-----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
++....++.+.||+|+||.||.+....... .||+|.+++. .+......|.+|..+|+.++|||||++++++-.
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 345677888999999999999998754432 4899988764 467788999999999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEec
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
....+|++|||+||+|..+|+.. ....++...+..++.||++|+.||+++++|||||...|+|++....|||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999999864 1346999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-C
Q 001865 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 894 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G 894 (1002)
|+|+.+..... ++ .. ..-.-...|||||.+....++.++|||||||+|||+++ |
T Consensus 847 GlArDiy~~~y---------yr-~~---------------~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG 901 (1025)
T KOG1095|consen 847 GLARDIYDKDY---------YR-KH---------------GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLG 901 (1025)
T ss_pred chhHhhhhchh---------ee-cc---------------CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCC
Confidence 99985432211 11 10 01123467999999999999999999999999999997 9
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 895 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
..||.+.++.+++...+.+. .++.+..++..+.++|..||+.+|++||++...+++
T Consensus 902 ~~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q 957 (1025)
T KOG1095|consen 902 ATPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQ 957 (1025)
T ss_pred CCCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhh
Confidence 99999999999998777765 666666788889999999999999999997665554
No 354
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.4e-33 Score=305.74 Aligned_cols=246 Identities=26% Similarity=0.365 Sum_probs=202.8
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCC
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||.|+||.||++.+.. ++.||+|.+..... ......+.+|++++++++|+||+++++++......|+||||+.++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999977 99999999876532 235567889999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001865 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++.... ..++...+..++.+++.+|+|||++|++||||||+||+++.++.++|+|||++.........
T Consensus 78 ~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~------- 149 (251)
T cd05041 78 SLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT------- 149 (251)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-------
Confidence 9999986542 35889999999999999999999999999999999999999999999999998543210000
Q ss_pred hhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001865 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+...
T Consensus 150 ------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~ 211 (251)
T cd05041 150 ------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG 211 (251)
T ss_pred ------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC
Confidence 00011234567999999988889999999999999999998 89999887766655554432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...+.....+..+.+|+.+||..+|.+||+ +.++++
T Consensus 212 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~ell~ 247 (251)
T cd05041 212 -YRMPAPQLCPEEIYRLMLQCWAYDPENRPS----FSEIYN 247 (251)
T ss_pred -CCCCCCccCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 333334456789999999999999999999 777664
No 355
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.3e-33 Score=309.90 Aligned_cols=250 Identities=24% Similarity=0.328 Sum_probs=204.8
Q ss_pred ccCCccccccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
...+|.+.+.||.|+||.||+|.+... ...+++|...... .......+.+|+.+++.++||||+++++++.. +.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 456799999999999999999987544 4578999886542 24455678899999999999999999998875 55
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.|+||||+++++|.+++.... ..++...++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 789999999999999997643 3589999999999999999999999999999999999999999999999999855321
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
... .......+++.|+|||.+....++.++||||||+++|++++ |..||.+.+
T Consensus 160 ~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 213 (270)
T cd05056 160 ESY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK 213 (270)
T ss_pred ccc--------------------------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 100 00112235678999999988889999999999999999985 999999888
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
..+....+..+. ..+....++..+.+|+.+||..+|.+|||+.+
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 257 (270)
T cd05056 214 NNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTE 257 (270)
T ss_pred HHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 777666655432 23334457889999999999999999999433
No 356
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.7e-33 Score=309.13 Aligned_cols=244 Identities=23% Similarity=0.329 Sum_probs=198.0
Q ss_pred ccccccCcEEEEEEEEcCCCe--EEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEEEecc
Q 001865 675 KPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
+.||+|+||.||++.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 358999999999999988775 4688887642 2334456788899999999 8999999999999999999999999
Q ss_pred CCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001865 752 PGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 752 ~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
++++|.+++.... ...++...++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999987532 12478999999999999999999999999999999999999999999999998
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~ 896 (1002)
+...... ........++.|+|||++....++.++|||||||++|+|++ |..
T Consensus 159 ~~~~~~~----------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~ 210 (270)
T cd05047 159 SRGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 210 (270)
T ss_pred ccccchh----------------------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 7421100 00011234567999999988889999999999999999996 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001865 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
||.+.+....+..+... ...+.....+..+.+|+.+||..||.+||++.+++
T Consensus 211 pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 262 (270)
T cd05047 211 PYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 262 (270)
T ss_pred CccccCHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence 99887776666665443 22223334678899999999999999999944433
No 357
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.7e-34 Score=311.38 Aligned_cols=238 Identities=20% Similarity=0.307 Sum_probs=191.5
Q ss_pred ccccccCcEEEEEEEEcCCCe-------EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 675 KPLGSGDTGSVHLVELCGSGQ-------YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~-------~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+.||.|+||.||+|.+...+. .+++|.+... .......+..|..+++.++||||+++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999999865543 4888877543 234456778899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc--------EEEEeccCCc
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSLTDFDLSC 819 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~--------vkL~DFG~a~ 819 (1002)
|||+++|+|..++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++. ++++|||++.
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999999997653 35899999999999999999999999999999999999987765 6999999874
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcC-CCC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG-YTP 897 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG-~~P 897 (1002)
... ......+++.|+|||++.+. .++.++|||||||++|+|++| ..|
T Consensus 157 ~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~ 205 (258)
T cd05078 157 TVL-------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP 205 (258)
T ss_pred ccC-------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 321 01234578899999999764 578899999999999999998 466
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|...+..... .+......++. ..+..+.+||.+||+.||++||| +++|++
T Consensus 206 ~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 255 (258)
T cd05078 206 LSALDSQKKL-QFYEDRHQLPA--PKWTELANLINQCMDYEPDFRPS----FRAIIR 255 (258)
T ss_pred hhhccHHHHH-HHHHccccCCC--CCcHHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 6655544433 23333333333 35678999999999999999999 777664
No 358
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.5e-34 Score=307.56 Aligned_cols=233 Identities=32% Similarity=0.476 Sum_probs=190.5
Q ss_pred cCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCchhHH
Q 001865 680 GDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLL 759 (1002)
Q Consensus 680 G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~ 759 (1002)
|.+|.||+|.+..+++.||+|.+++.. ...+|...+....||||+++++++...+.+|+||||++|++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999997642 223344455556799999999999999999999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcc
Q 001865 760 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 839 (1002)
Q Consensus 760 l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 839 (1002)
+... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+......
T Consensus 76 l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--------------- 138 (237)
T cd05576 76 ISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--------------- 138 (237)
T ss_pred HHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---------------
Confidence 8764 34899999999999999999999999999999999999999999999999987433210
Q ss_pred cCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCC
Q 001865 840 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS 919 (1002)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 919 (1002)
.....++..|+|||++.+..++.++|+||+|+++|+|++|..||...... ......+..
T Consensus 139 ---------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~~~~~~ 197 (237)
T cd05576 139 ---------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------INTHTTLNI 197 (237)
T ss_pred ---------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------cccccccCC
Confidence 11234567899999998888899999999999999999999887643211 111111112
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCc
Q 001865 920 STPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFF 958 (1002)
Q Consensus 920 ~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f 958 (1002)
....+..+.+||.+||+.||++||+.. ..++++++||||
T Consensus 198 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 198 PEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 233678899999999999999999953 236999999998
No 359
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=323.13 Aligned_cols=253 Identities=26% Similarity=0.312 Sum_probs=198.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-eEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-HVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~~~l 746 (1002)
.+.|.-...||+|+||.||++.... |..+|||.+....... ..+|.+|+.++.+++|||+|+++|||.+.+ ..+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 3688888999999999999999844 4899999877543211 455999999999999999999999999988 5999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---cccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g---IiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
|+|||++|+|.+.+.......+++.....|+.+++.||+|||... ||||||||+|||+|++..+||+|||+|.....
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999999999998754327899999999999999999999853 99999999999999999999999999954321
Q ss_pred -CCCCCCCcchhhhhcccCCCCCccccccccccccc-ccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 824 -KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF-VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 824 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.. ..... .||.+|+|||++.....+.++||||||++|.||++|+.+....
T Consensus 230 ~~~----------------------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 230 GDT----------------------------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred ccc----------------------------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 10 00111 7999999999999888999999999999999999999887643
Q ss_pred C------hHHHHHHHHhC-CC----CCCCC-CCCC--H---HHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 902 T------RQKTFANILHK-DL----KFPSS-TPTS--L---HAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~------~~~~~~~i~~~-~~----~~~~~-~~~s--~---~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
. ..+-....+.. .+ +.... .... . .+..+..+|++.+|..||++.+++..+
T Consensus 282 ~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 282 RPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred CCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 2 11111112211 11 11100 1112 2 245677899999999999977765555
No 360
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.4e-33 Score=309.27 Aligned_cols=245 Identities=22% Similarity=0.304 Sum_probs=199.1
Q ss_pred ccccccCcEEEEEEEEcCCC------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 675 KPLGSGDTGSVHLVELCGSG------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.||+|+||.||++.+.... ..+|+|.+.+.. .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986544 789999886542 2234567888999999999999999999999999999999
Q ss_pred eccCCCchhHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-----cEEEEeccCC
Q 001865 749 DYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLS 818 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g-----~vkL~DFG~a 818 (1002)
||+++++|.+++... ....+++..+..++.||+.||.|||+++++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999999753 223478899999999999999999999999999999999999887 8999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~P 897 (1002)
........ ........++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 159 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 159 RDIYKSDY-------------------------YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred cccccccc-------------------------cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 54321100 001122346788999999998889999999999999999997 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
|...+.......+..+. .+......+..+.+||.+||..+|.+||++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 262 (269)
T cd05044 214 YPALNNQEVLQHVTAGG-RLQKPENCPDKIYQLMTNCWAQDPSERPTFDR 262 (269)
T ss_pred CcccCHHHHHHHHhcCC-ccCCcccchHHHHHHHHHHcCCCcccCCCHHH
Confidence 98877766665554332 22333446788999999999999999999443
No 361
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.1e-33 Score=306.53 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=207.5
Q ss_pred CccccccccccCcEEEEEEEEcC-CCeEEEEEEeecccc-------cChHHHHHHHHHHHHHHh-CCCCCcceeEEEEee
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM-------LNRNKVHRACAEREILDM-LDHPFVPALYASFQT 740 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~avK~~~~~~~-------~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~ 740 (1002)
.|++.+.||+|+||.||++.+.. +++.+|+|.+..... ........+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999977 678999998864321 122344567788888865 799999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecCCcEEEEeccC
Q 001865 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
++..|+||||+++++|.+++.. .....+++..++.++.|++.||.|||+ .||+|+||+|+||+++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999998753 223568999999999999999999996 6899999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+....... ......|+..|+|||++.+..++.++|+||||+++|+|++|+.|
T Consensus 161 ~~~~~~~~----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 161 AKQKQPES----------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeeccccc----------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 85432110 11234688999999999988889999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001865 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
|...........+.............+..+.+||.+||+.||++||++.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~ 264 (269)
T cd08528 213 FYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVS 264 (269)
T ss_pred ccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHH
Confidence 9887776666666555443323335678999999999999999999944443
No 362
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3e-33 Score=312.72 Aligned_cols=256 Identities=22% Similarity=0.333 Sum_probs=205.4
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+...+|+..+.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 345689999999999999999999877775 57888876432 233344678899999999999999999988754
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..++++||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 4689999999999999987642 35889999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 160 EGDEKE-------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cCcccc-------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 311100 01112346778999999998889999999999999999997 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
....... .+......++....++..+.+++.+||..+|++||++.+++..
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 215 IPTREIP-DLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CCHHHHH-HHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 6654443 3444444444445567889999999999999999995554443
No 363
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.7e-33 Score=306.08 Aligned_cols=245 Identities=21% Similarity=0.315 Sum_probs=190.9
Q ss_pred ccccccCcEEEEEEEEcC--CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccC
Q 001865 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
+.||+|+||.||++.... ....+|+|.+.... .......+.+|+.+++.++||||+++++++...+..|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 368999999999997533 34578888776432 23344567889999999999999999999999999999999999
Q ss_pred CCchhHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 753 GGELFLLLDRQPT---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 753 ggsL~~~l~~~~~---~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
+++|.+++..... ...++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999999976432 2356788899999999999999999999999999999999999999999999854221100
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-------CCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-------~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
........+++.|+|||++.. ..++.++|||||||++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 156 ----------------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ----------------------eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 001123346778999999743 356779999999999999998 88999888
Q ss_pred ChHHHHHHHHhC-CCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 902 TRQKTFANILHK-DLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 902 ~~~~~~~~i~~~-~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
...+....+... ...++. ....+..+.+++..|+ .||++||++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~ 262 (269)
T cd05042 214 SDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEE 262 (269)
T ss_pred CHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHH
Confidence 776666655443 222222 2246777888999998 59999999433
No 364
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.5e-33 Score=303.23 Aligned_cols=248 Identities=19% Similarity=0.269 Sum_probs=196.1
Q ss_pred ccccccCcEEEEEEEEcC---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe-eCCeEEEEEec
Q 001865 675 KPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVCLITDY 750 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lV~E~ 750 (1002)
+.||+|+||.||+|.+.. .+..+|+|.+... ........+.+|+.+++.++||||+++++++. .++..|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998743 3467999987542 23445677888999999999999999999765 56678999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+.+++|.+++.... ..++...+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~--- 154 (262)
T cd05058 79 MKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY--- 154 (262)
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce---
Confidence 99999999997643 34677888899999999999999999999999999999999999999999998643211100
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 909 (1002)
.........+++.|+|||++.+..++.++|||||||++|+|++ |.+||...+.......
T Consensus 155 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~ 214 (262)
T cd05058 155 --------------------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVY 214 (262)
T ss_pred --------------------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 0011122346778999999988889999999999999999999 5677877776666655
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
+..+. ..+.....+..+.+++.+||..+|++||+ +.+++
T Consensus 215 ~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~il 253 (262)
T cd05058 215 LLQGR-RLLQPEYCPDPLYEVMLSCWHPKPEMRPT----FSELV 253 (262)
T ss_pred HhcCC-CCCCCCcCCHHHHHHHHHHcCCChhhCCC----HHHHH
Confidence 55442 22223345778999999999999999999 55554
No 365
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.5e-33 Score=308.27 Aligned_cols=257 Identities=23% Similarity=0.339 Sum_probs=205.7
Q ss_pred cCCccccccccccCcEEEEEEEEc----CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee--C
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 741 (1002)
...|++.+.||+|+||.||++... .++..+|+|+++..... .....+.+|+.+++.+.|+||+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 457899999999999999999864 34789999999765321 356778999999999999999999999877 5
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...|+||||+++++|.+++.... ..++...+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 68999999999999999997653 35899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
...... ........++..|++||.+.+..++.++|||||||++|+|++|..||...
T Consensus 160 ~~~~~~------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 215 (284)
T cd05038 160 PEDKDY------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSP 215 (284)
T ss_pred ccCCcc------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence 311100 00011123556799999998888999999999999999999999998654
Q ss_pred ChH--------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 902 TRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 902 ~~~--------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
... ......+......+....++..+.+|+.+||..+|.+||++.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 216 PAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred cchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 221 12223334444455455567889999999999999999995444433
No 366
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4e-33 Score=304.95 Aligned_cols=239 Identities=21% Similarity=0.299 Sum_probs=189.8
Q ss_pred ccccccCcEEEEEEEEcC------------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC
Q 001865 675 KPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~------------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
+.||+|+||.||++.... ....+++|++... .......+..|+.+++.++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998532 2336888887643 2334456788899999999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc-------EEEEec
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------VSLTDF 815 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~-------vkL~DF 815 (1002)
..++||||+++++|..++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++. ++++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999999888654 245899999999999999999999999999999999999987664 899999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-CCCCCChhhHHHHHHHHHHHH-c
Q 001865 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEML-Y 893 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-~~~~~~~sDIwSlGvil~ell-t 893 (1002)
|++..... .....|+..|+|||++. +..++.++|||||||++|+|+ .
T Consensus 157 g~~~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (262)
T cd05077 157 GIPITVLS-------------------------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205 (262)
T ss_pred CCCccccC-------------------------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 98844211 11235788999999986 466888999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 894 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|..||......+.. .+...... ...+.+.++.+||.+||+.||.+||+ +.+|+++
T Consensus 206 ~~~p~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~----~~~il~~ 260 (262)
T cd05077 206 GEIPLKDKTLAEKE-RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPF----FRAIMRD 260 (262)
T ss_pred CCCCCCCcchhHHH-HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcC----HHHHHHh
Confidence 89998776544332 22332222 22234578899999999999999999 6676653
No 367
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.6e-33 Score=304.76 Aligned_cols=247 Identities=22% Similarity=0.318 Sum_probs=192.1
Q ss_pred ccccccCcEEEEEEEEc--CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccC
Q 001865 675 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
+.||+|+||.||++... .++..+|+|.++... .......+.+|+.+++.++||||+++++++.....+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 46899999999999864 345689999887542 22333567889999999999999999999999999999999999
Q ss_pred CCchhHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCC
Q 001865 753 GGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 753 ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
+++|.+++.... ....+...+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--- 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY--- 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce---
Confidence 999999987532 22466778889999999999999999999999999999999999999999999853221100
Q ss_pred CcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-------CCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001865 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-------GHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-------~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
........|++.|+|||++.+. .++.++||||||+++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 156 ----------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred ----------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 0112234678899999998642 35779999999999999996 99999877
Q ss_pred ChHHHHHHHHh-CCCCCCCC---CCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 902 TRQKTFANILH-KDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 902 ~~~~~~~~i~~-~~~~~~~~---~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+....... .....+.. ...+..+.+++.+|+ .+|++||| +++|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt----~~~l~ 264 (269)
T cd05087 214 SDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPS----AEEVH 264 (269)
T ss_pred ChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCC----HHHHH
Confidence 66555443332 22222221 235678899999998 68999999 55554
No 368
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=2.9e-34 Score=284.56 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=209.1
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeC--Ce
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--TH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~--~~ 743 (1002)
+.++|++++.+|+|.||.||.+....++.+++||++++ ...+.+.+|+.||+.| +||||++++++..+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 35799999999999999999999999999999999874 4567899999999999 599999999998754 56
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~ 822 (1002)
..+|+||+.+.+...+... ++...++.++.+|+.||.|+|++||+|||+||.|+|++. ...++|+|+|+|..+.
T Consensus 110 paLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 7899999999998888754 889999999999999999999999999999999999995 4579999999997653
Q ss_pred CCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCC-C
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFR-G 900 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~-~ 900 (1002)
+. ...+..+.+..|--||.+.. ..|+.+-|+|||||++..|++.+.||. |
T Consensus 185 p~----------------------------~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 185 PG----------------------------KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred CC----------------------------ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 21 12233467788999999865 457889999999999999999888875 4
Q ss_pred CChHHHHHHHHh-------------CCCC----------------CC-----CC-CCCCHHHHHHHHHccccCcCCCCCC
Q 001865 901 KTRQKTFANILH-------------KDLK----------------FP-----SS-TPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 901 ~~~~~~~~~i~~-------------~~~~----------------~~-----~~-~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
.++.+.+-+|.+ -.+. |. .. .-.++++.+||.++|.+|..+|+|
T Consensus 237 ~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT- 315 (338)
T KOG0668|consen 237 HDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT- 315 (338)
T ss_pred CCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc-
Confidence 455544444422 0111 11 11 124689999999999999999999
Q ss_pred hhcHHHHHcCCCcCCCChh
Q 001865 946 HEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 946 ~~~a~elL~Hp~f~~~~~~ 964 (1002)
|.|++.||||..+--+
T Consensus 316 ---akEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 316 ---AKEAMAHPYFAPVREA 331 (338)
T ss_pred ---hHHHhcCchHHHHHHH
Confidence 9999999999975433
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-35 Score=297.30 Aligned_cols=263 Identities=24% Similarity=0.365 Sum_probs=215.3
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHH-HHhCCCCCcceeEEEEeeCCe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++.+-+..||.|+||+|++..++.+|+..|||.++.... .....++..|.+. ++.-++||||++|+....++.
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd 137 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD 137 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc
Confidence 3556677888899999999999999999999999999987533 3344566677765 555689999999999999999
Q ss_pred EEEEEeccCCCchhHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001865 744 VCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~---~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
-||.||+| ..+|..+.+. .....+++..+-.|..-.+.||.||-.. +|||||+||+|||++..|.+||||||.+.
T Consensus 138 cWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 138 CWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred eeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchH
Confidence 99999999 7888766553 2235699999999999999999999865 89999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
.+.. +...+...|...|||||.+.. ..|+.+||+||||++|||+.||.+|
T Consensus 217 qLv~----------------------------SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fP 268 (361)
T KOG1006|consen 217 QLVD----------------------------SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFP 268 (361)
T ss_pred hHHH----------------------------HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCC
Confidence 4321 112234578899999999843 4588899999999999999999999
Q ss_pred CCCCC-hHHHHHHHHhCCCCCCCC----CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 898 FRGKT-RQKTFANILHKDLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 898 f~~~~-~~~~~~~i~~~~~~~~~~----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
|.+-+ ..+.+..+..+..+.... ...+..+..||.-||.+|-+.||. +.+|+++||++-..
T Consensus 269 yr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpk----y~~Lk~~~fyr~y~ 334 (361)
T KOG1006|consen 269 YRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPK----YDDLKKFPFYRMYA 334 (361)
T ss_pred cchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcc----hhhhhcCchhhhhh
Confidence 98854 456667777776553322 236788999999999999999999 99999999998743
No 370
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.1e-33 Score=305.64 Aligned_cols=238 Identities=19% Similarity=0.295 Sum_probs=188.8
Q ss_pred cccccCcEEEEEEEEcCC------------------------CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCc
Q 001865 676 PLGSGDTGSVHLVELCGS------------------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 731 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~------------------------~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 731 (1002)
.||+|+||.||++....+ ...+++|++... .......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 689999999999975322 235888987643 22334567888999999999999
Q ss_pred ceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC---
Q 001865 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--- 808 (1002)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g--- 808 (1002)
+++++++..++..|+||||+++++|..++... ...+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999988653 34589999999999999999999999999999999999998644
Q ss_pred ----cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHH
Q 001865 809 ----HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWA 883 (1002)
Q Consensus 809 ----~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwS 883 (1002)
.+||+|||++..... .....++..|+|||.+.+ ..++.++||||
T Consensus 158 ~~~~~~kl~d~g~~~~~~~-------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS-------------------------------REERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred CccceeeecCCcccccccc-------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 489999998743210 011246788999999865 56788999999
Q ss_pred HHHHHHHHH-cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 884 LGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 884 lGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|||++|+|+ +|..||.+....+... ........+. ..+..+.+||.+||+.+|++||+ +.++|++
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rps----~~~il~~ 272 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSEKER-FYEKKHRLPE--PSCKELATLISQCLTYEPTQRPS----FRTILRD 272 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHHHHH-HHHhccCCCC--CCChHHHHHHHHHcccChhhCcC----HHHHHHh
Confidence 999999985 7999998766544332 2333223332 24567899999999999999999 6777653
No 371
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.2e-33 Score=304.26 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=201.7
Q ss_pred ccccccccccCcEEEEEEEEc---CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-----
Q 001865 671 FRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
|++.+.||+|+||.||+|.+. .++..+|||++.... ........+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 678899999999999999864 357899999997643 33445677889999999999999999999886432
Q ss_pred -eEEEEEeccCCCchhHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001865 743 -HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
..+++++|+.+++|.+++... ....++...++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 357899999999998887432 112578999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~ 896 (1002)
+........ ........+++.|++||.+....++.++|||||||++|+|++ |++
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~ 214 (273)
T cd05074 160 SKKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214 (273)
T ss_pred cccccCCcc-------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence 865421110 001112345678999999988888999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
||.+.+.......+.... ........+..+.+|+.+||..+|++||+ +.+++
T Consensus 215 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps----~~~~~ 266 (273)
T cd05074 215 PYAGVENSEIYNYLIKGN-RLKQPPDCLEDVYELMCQCWSPEPKCRPS----FQHLR 266 (273)
T ss_pred CCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 998877766665555432 22223346788999999999999999999 55554
No 372
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=298.99 Aligned_cols=264 Identities=25% Similarity=0.469 Sum_probs=216.9
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
..+|.-++.+|.|+- .|..|.|.-.++.+|+|.+... ........+..+|..++..+.|+||++++.+|...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 458999999999998 7888999899999999998776 44455567788999999999999999999999643
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+|||+| ..+|...+.- .+....+..++.|+++|++|||+.||+||||||+||++..++.+||.|||+|+.-
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 4689999999 8889888863 2888999999999999999999999999999999999999999999999999543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... -.-+.++.|..|.|||++.+..+...+||||+||++.||+.|+..|.|.
T Consensus 169 ~~~----------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~ 220 (369)
T KOG0665|consen 169 DTD----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK 220 (369)
T ss_pred Ccc----------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence 211 1223467899999999999999999999999999999999999999987
Q ss_pred ChHHHHHHHHhCC---------------------------C----CCCC---------CCCCCHHHHHHHHHccccCcCC
Q 001865 902 TRQKTFANILHKD---------------------------L----KFPS---------STPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~~~---------------------------~----~~~~---------~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+....+.++...- . .+|+ .......+.+|+.+||..||++
T Consensus 221 d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~ 300 (369)
T KOG0665|consen 221 DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEK 300 (369)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhh
Confidence 7766665554310 0 0111 1122346789999999999999
Q ss_pred CCCChhcHHHHHcCCCcCCCChhhhhccCCC
Q 001865 942 RLGSHEGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
|++ ++++|+||||+ -|-.-...+.|
T Consensus 301 Ris----v~daL~HPY~~--vw~~~~ev~ap 325 (369)
T KOG0665|consen 301 RIS----VDDALRHPYIK--VWYDPDEVEAP 325 (369)
T ss_pred ccc----HHHHhcCCeee--eecccccccCC
Confidence 999 99999999999 35433443444
No 373
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=305.15 Aligned_cols=142 Identities=29% Similarity=0.435 Sum_probs=125.4
Q ss_pred hcccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-----C---CC
Q 001865 659 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----H---PF 730 (1002)
Q Consensus 659 ~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-----h---pn 730 (1002)
.+..|..++.++|.+.++||+|-|++||+|+|..+.++||+|+++.. ....+....||.+|+++. | .+
T Consensus 68 pV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~ 143 (590)
T KOG1290|consen 68 PVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKC 143 (590)
T ss_pred eeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence 34567778889999999999999999999999999999999999864 334456678999999882 2 48
Q ss_pred cceeEEEEe----eCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEe
Q 001865 731 VPALYASFQ----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQ 805 (1002)
Q Consensus 731 Iv~l~~~~~----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~ 805 (1002)
||+|++.|. .+.++|||+|++ |.+|..++.....+-++...++.|++|||.||.|||.. ||||.||||+|||+.
T Consensus 144 VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 144 VVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 999999997 456999999999 99999999988778899999999999999999999975 999999999999994
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=326.51 Aligned_cols=259 Identities=28% Similarity=0.422 Sum_probs=223.1
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEe-----eC
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----TK 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~~ 741 (1002)
.+.|++...||.|.+|.||+++.+.+++..|+|+...... .-..+..|.+||+.+ +|||++.+|++|. .+
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 4678999999999999999999999999999999876532 224667788999888 7999999999986 35
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|||||||.||+..++++.-.+..+.+..+..|++.++.||.+||.+.+||||||-.|||++.+|.|||+|||++...
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 78999999999999999998766788999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-----CCCChhhHHHHHHHHHHHHcCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-----~~~~~sDIwSlGvil~elltG~~ 896 (1002)
. ......++.+|||.|||||++... .|+..+|+||||++..||.-|.+
T Consensus 174 d---------------------------sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P 226 (953)
T KOG0587|consen 174 D---------------------------STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP 226 (953)
T ss_pred e---------------------------cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence 3 223445678999999999999543 46679999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 897 PFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
|+....+...+-.|-+...+ +..+...+.++.+||..||.+|-.+||+ ..++|+|||++.-
T Consensus 227 Pl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~----~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 227 PLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPS----TEELLKHPFITEQ 288 (953)
T ss_pred CccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcc----hhhhccCCccccc
Confidence 99988887766666554332 2234456788999999999999999999 9999999999953
No 375
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=9e-33 Score=307.53 Aligned_cols=259 Identities=16% Similarity=0.171 Sum_probs=191.3
Q ss_pred cccCCccccccccccCcEEEEEEEEcCC---CeEEEEEEeecccccChHH--------HHHHHHHHHHHHhCCCCCccee
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNK--------VHRACAEREILDMLDHPFVPAL 734 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~~avK~~~~~~~~~~~~--------~~~~~~E~~il~~l~hpnIv~l 734 (1002)
+..++|++.+.||+|+||.||+|.+..+ +..+|+|+........... ......+...+..++|++++.+
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457899999999999999999999777 6778888654321110000 0111223344556789999999
Q ss_pred EEEEeeCC----eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcE
Q 001865 735 YASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 810 (1002)
Q Consensus 735 ~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~v 810 (1002)
++++.... +.+++++++ ..++.+++... ...++..++.++.||+.||+|||+++|+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 98765443 457899988 56777777653 336788899999999999999999999999999999999999999
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHH
Q 001865 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (1002)
Q Consensus 811 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~e 890 (1002)
+|+|||+|.......... ...........||+.|+|||++.+..++.++|||||||++|+
T Consensus 166 ~l~DFGla~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHI--------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred EEEEcCCceeeccCCccc--------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999996653211100 000111233579999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCh-HHH--------HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 891 MLYGYTPFRGKTR-QKT--------FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 891 lltG~~Pf~~~~~-~~~--------~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|++|..||.+... ... +..+..+.... ..++..+.+++..|+..+|++||+ +++|++
T Consensus 226 l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~----~~~l~~ 291 (294)
T PHA02882 226 WAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKI---KNANKFIYDFIECVTKLSYEEKPD----YDALIK 291 (294)
T ss_pred HHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhcc---CCCCHHHHHHHHHHHhCCCCCCCC----HHHHHH
Confidence 9999999987632 221 12222222222 235678999999999999999999 666653
No 376
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=6.9e-33 Score=301.58 Aligned_cols=236 Identities=19% Similarity=0.260 Sum_probs=190.1
Q ss_pred ccccccCcEEEEEEEEcCCC----------eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 675 KPLGSGDTGSVHLVELCGSG----------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~----------~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
+.||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.+++.++||||+++++++.. +..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999998776 357888776432 115678889999999999999999999888 778
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-------cEEEEeccC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-------HVSLTDFDL 817 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g-------~vkL~DFG~ 817 (1002)
|+||||+++++|.+++..... .++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999986532 589999999999999999999999999999999999999887 799999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC--CCCChhhHHHHHHHHHHHHc-C
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLY-G 894 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~--~~~~~sDIwSlGvil~ellt-G 894 (1002)
+..... .....++..|+|||++.+. .++.++|||||||++|+|++ |
T Consensus 155 a~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 155 PITVLS-------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred cccccc-------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCC
Confidence 854321 1123467789999999876 78889999999999999998 6
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001865 895 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..||...+......... .....+. .....+.+||.+||..+|.+||+ +.++++
T Consensus 204 ~~p~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 256 (259)
T cd05037 204 EEPLSTLSSSEKERFYQ-DQHRLPM--PDCAELANLINQCWTYDPTKRPS----FRAILR 256 (259)
T ss_pred CCCcccCCchhHHHHHh-cCCCCCC--CCchHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 88887765433332222 2211221 22368899999999999999999 666553
No 377
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.5e-34 Score=315.34 Aligned_cols=257 Identities=27% Similarity=0.402 Sum_probs=212.7
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC------CCcceeEEEEe
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~ 739 (1002)
+..++|.+....|.|-||+|..|.+...|..||||+++... ...+.-+.|++||++|+. -|++.++..|.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE----~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE----VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch----HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 44689999999999999999999999999999999998642 233445679999999953 48999999999
Q ss_pred eCCeEEEEEeccCCCchhHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccC
Q 001865 740 TKTHVCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDL 817 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~ 817 (1002)
..+++|||+|-+ .-+|.++|++- ....|....++.|+.||..||..|-..||+|.||||+|||++.+ ..+||||||.
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence 999999999999 88999999863 23458889999999999999999999999999999999999965 4699999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
|...+.. ..+.+..+..|.|||++.|.+|++..|+||+||+||||+||+..
T Consensus 584 A~~~~en-----------------------------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 584 ASFASEN-----------------------------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred ccccccc-----------------------------cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeecccee
Confidence 8543321 11234556789999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCC---------------------------------------------------CCCC---
Q 001865 898 FRGKTRQKTFANILHKDLKFPS---------------------------------------------------STPT--- 923 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~---------------------------------------------------~~~~--- 923 (1002)
|+|.++..+++..+.-.-++|. ...+
T Consensus 635 FpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~de 714 (752)
T KOG0670|consen 635 FPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDE 714 (752)
T ss_pred cCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCch
Confidence 9999888877755442111110 0001
Q ss_pred ----CHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 924 ----SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 924 ----s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
-..+.+||.+||..||++|+| ++|+|+||||+.
T Consensus 715 q~~~~~~~rdLLdkml~LdP~KRit----~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 715 QPKIVQQLRDLLDKMLILDPEKRIT----VNQALKHPFITE 751 (752)
T ss_pred hHHHHHHHHHHHHHHhccChhhcCC----HHHHhcCCcccC
Confidence 124678999999999999999 999999999975
No 378
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.7e-35 Score=293.21 Aligned_cols=265 Identities=25% Similarity=0.367 Sum_probs=214.1
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe------
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ------ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------ 739 (1002)
...+.|.-+..||+|.||.||+|+.+.+|+.||+|.+--... .........+|+.+|..|+|+|++.+++.+.
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~ 92 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPT 92 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCc
Confidence 346789999999999999999999999999999986532111 1122345578999999999999999988764
Q ss_pred --eCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001865 740 --TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 740 --~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
+...+|+||.+| ..+|..++... ...++..+++.++.++..||.|+|.+.|+|||+||.|+||+.+|.+||+|||+
T Consensus 93 ~r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 93 NRDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ccccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 234699999999 67888888653 35699999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCC
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~ 896 (1002)
++.++......-+ ..+..+.|+.|++||.+.+. .|+++.|||..|||+.+|.++.+
T Consensus 171 ar~fs~~~n~~kp-----------------------rytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrsp 227 (376)
T KOG0669|consen 171 ARAFSTSKNVVKP-----------------------RYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSP 227 (376)
T ss_pred ccceecccccCCC-----------------------CcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCc
Confidence 9776544332211 12345779999999999875 58899999999999999999999
Q ss_pred CCCCCChHHHHHHHHh--CCCC---CCCC----------------------------CCCCHHHHHHHHHccccCcCCCC
Q 001865 897 PFRGKTRQKTFANILH--KDLK---FPSS----------------------------TPTSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~--~~~~---~~~~----------------------------~~~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
-|.+.+....+..|.. +.+. ||.. -.-++++.+|+.+||.+||.+|+
T Consensus 228 imqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~ 307 (376)
T KOG0669|consen 228 IMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRI 307 (376)
T ss_pred cccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCc
Confidence 9999988877776643 2111 1110 01234677999999999999999
Q ss_pred CChhcHHHHHcCCCcCC
Q 001865 944 GSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 944 t~~~~a~elL~Hp~f~~ 960 (1002)
+ +.++|+|.||..
T Consensus 308 ~----ad~alnh~~F~k 320 (376)
T KOG0669|consen 308 D----ADQALNHDFFWK 320 (376)
T ss_pred c----hHhhhchhhhhc
Confidence 9 999999999986
No 379
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=310.17 Aligned_cols=255 Identities=22% Similarity=0.310 Sum_probs=222.5
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC
Q 001865 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..|.+...+.....+||.|.||.||.+.++...-.+|||.++.+. -.++.|..|+.+|+.++|||+|+++++|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----MeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc----hhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 456677788889999999999999999999989999999998653 3578899999999999999999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCccc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|||+|||..|+|.+||.......++.-.+..++.||..|+.||..+++|||||...|+|+..+..||+.|||+++.+
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999999766666888888899999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
..+.. ..+..---...|.|||.|.-..++.++|||+|||+|||+.| |-.||+|
T Consensus 416 tgDTY--------------------------TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 416 TGDTY--------------------------TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred cCCce--------------------------ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 53321 11111123567999999999999999999999999999996 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.+...++. ++...+.......|++...+|+..||+++|..||++.+
T Consensus 470 idlSqVY~-LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFae 515 (1157)
T KOG4278|consen 470 IDLSQVYG-LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAE 515 (1157)
T ss_pred ccHHHHHH-HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHH
Confidence 98777664 55555666666778999999999999999999999765
No 380
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3e-32 Score=298.95 Aligned_cols=247 Identities=18% Similarity=0.301 Sum_probs=191.9
Q ss_pred ccccccCcEEEEEEEEcCC--CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccC
Q 001865 675 KPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
+.||+|+||.||++..... ...+++|.++... .......+.+|+.+++.++||||+++++.+......|+||||++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3589999999999976433 3356677765432 23345678899999999999999999999999999999999999
Q ss_pred CCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 753 GGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 753 ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+++|.+++.... ...++...++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||++........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999999997532 23467778889999999999999999999999999999999999999999998743211100
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccccC-------CCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-------~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
.......+|++.|+|||++.. ..++.++|||||||++|+|++ |..||...+
T Consensus 155 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 213 (268)
T cd05086 155 ---------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS 213 (268)
T ss_pred ---------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Confidence 011123568899999999853 235678999999999999996 678998877
Q ss_pred hHHHHHHHHhCC-CCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 903 RQKTFANILHKD-LKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~~~-~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
..+.+..+..+. ...+. ....+..+.+++..|| .+|++||+ +.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~----~~~i~ 263 (268)
T cd05086 214 DREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRAT----AEEVH 263 (268)
T ss_pred HHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCC----HHHHH
Confidence 777666655432 22211 2346778899999999 68999999 66654
No 381
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-33 Score=314.50 Aligned_cols=259 Identities=21% Similarity=0.290 Sum_probs=221.1
Q ss_pred ccCCccccccccccCcEEEEEEEEcCC-C--eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGS-G--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~-~--~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.....++.+.||+|.||+|+++.|... | ..||||+++...... ....|.+|+.+|-+|+|+|+++||++..+ ..
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp 184 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QP 184 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence 345677889999999999999998544 3 368999998765432 67889999999999999999999999887 67
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+.||||+++.|+|.+.|.+.....|....+..|+.||+.|+.||.+++.|||||...|||+-.-..|||+|||+.+.+..
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 88999999999999999986677899999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
..... ......--...|+|||.|....++.++|+|++||+||||++ |..||.|-.
T Consensus 265 ned~Y------------------------vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~ 320 (1039)
T KOG0199|consen 265 NEDMY------------------------VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR 320 (1039)
T ss_pred CCcce------------------------EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC
Confidence 33211 11112234567999999999999999999999999999996 999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...++++|- ..-.++....|+..+.+++..||..+|..||||..+.++.+
T Consensus 321 g~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 321 GIQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred HHHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 999888887 55567777789999999999999999999999765544443
No 382
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-33 Score=318.72 Aligned_cols=245 Identities=31% Similarity=0.446 Sum_probs=196.5
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeC------C
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------T 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~ 742 (1002)
.-|...+.||.|+||.||+++++.+|+.+|||.+++.. .....+...+|+++|++++|+|||+++++-++. .
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 45677788999999999999999999999999998754 455667889999999999999999999886543 3
Q ss_pred eEEEEEeccCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec--CC--cEEEEeccC
Q 001865 743 HVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NG--HVSLTDFDL 817 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~--~g--~vkL~DFG~ 817 (1002)
...+|||||.||+|..+++.-. ...|++..++.++..+..||.|||++|||||||||.||++-. +| .-||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 5789999999999999998521 235999999999999999999999999999999999999863 34 379999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCC
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
|+..+.. ....+++||+.|.+||++.. ..|+..+|.|||||++|+++||..
T Consensus 171 Arel~d~----------------------------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~l 222 (732)
T KOG4250|consen 171 ARELDDN----------------------------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGEL 222 (732)
T ss_pred cccCCCC----------------------------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCC
Confidence 9776532 13457899999999999984 788889999999999999999999
Q ss_pred CCCCCC----hHHHHHHHHhC---------------CC----CCCCCCCCCHH----HHHHHHHccccCcCCCC
Q 001865 897 PFRGKT----RQKTFANILHK---------------DL----KFPSSTPTSLH----AKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 897 Pf~~~~----~~~~~~~i~~~---------------~~----~~~~~~~~s~~----~~~Ll~~~L~~dP~~Rp 943 (1002)
||-..- ..++...+..+ .+ .+|.+...+.. +-..|..+|..+|.+|-
T Consensus 223 PF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 223 PFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred CCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 995422 22233333221 11 12222223332 34678899999999998
No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.6e-32 Score=328.82 Aligned_cols=263 Identities=17% Similarity=0.216 Sum_probs=182.0
Q ss_pred cccCCccccccccccCcEEEEEEEEcCC----CeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEE----
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS---- 737 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~----~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~---- 737 (1002)
+..++|.+.+.||+|+||.||+|.+..+ +..||+|.+.... .......+ .++...+.+++.+...
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 3467999999999999999999999888 8999999876421 11111111 1222222222222211
Q ss_pred --EeeCCeEEEEEeccCCCchhHHHhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001865 738 --FQTKTHVCLITDYCPGGELFLLLDRQPTK------------------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (1002)
Q Consensus 738 --~~~~~~~~lV~E~~~ggsL~~~l~~~~~~------------------~l~~~~i~~i~~qil~aL~~LH~~gIiHrDL 797 (1002)
.......++||||+.+++|.+++...... ......+..++.||+.||+|||++||+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 24567899999999999999998753211 1123456789999999999999999999999
Q ss_pred CCCcEEEec-CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC--
Q 001865 798 KPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-- 874 (1002)
Q Consensus 798 KP~NILl~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~-- 874 (1002)
||+|||++. ++.+||+|||+|..+.... .......+||+.|+|||.+....
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------------------~~~~~~~~~t~~Y~APE~~~~~~~~ 335 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------------------NYIPKEFLLDPRYAAPEQYIMSTQT 335 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccc--------------------------ccCCcccccCCCccChHHhhccCCC
Confidence 999999985 6899999999996532110 01123467899999999764322
Q ss_pred --------------------CCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHh-CCCCC----------------
Q 001865 875 --------------------HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH-KDLKF---------------- 917 (1002)
Q Consensus 875 --------------------~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~-~~~~~---------------- 917 (1002)
++.++|||||||++|+|+++..|+.. ....+...+. ....+
T Consensus 336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 413 (566)
T PLN03225 336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLR 413 (566)
T ss_pred CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhh
Confidence 23456999999999999997766532 2222222211 11100
Q ss_pred ---CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhh
Q 001865 918 ---PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 918 ---~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
.........+++||.+||++||.+||| +.++|+||||++..+..+.
T Consensus 414 ~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t----a~e~L~Hpff~~~~~~~~~ 462 (566)
T PLN03225 414 RGFEVLDLDGGAGWELLKSMMRFKGRQRIS----AKAALAHPYFDREGLLGLS 462 (566)
T ss_pred hhhhhccccchHHHHHHHHHccCCcccCCC----HHHHhCCcCcCCCCccccc
Confidence 000112334568999999999999999 9999999999997776443
No 384
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-33 Score=306.88 Aligned_cols=253 Identities=22% Similarity=0.337 Sum_probs=213.5
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCC--C--eEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEee
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS--G--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~--~--~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
.+......+.+.||.|.||.||++....- | --||||.-+.+. ++...+.|..|..+|++++||||++++|++.+
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 34455667778899999999999986332 2 358888877653 45567899999999999999999999999987
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
. .+|||||+++-|.|..|++.+. ..++...+..|+.||..||+|||+.+.|||||...|||+.+..-|||+|||+++.
T Consensus 463 ~-P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 463 Q-PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred c-ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhh
Confidence 4 5899999999999999998874 5699999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
+..+.. ...+...-...|||||.+.-..++.+||||.|||++||+++ |.-||.
T Consensus 541 ~ed~~y--------------------------YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfq 594 (974)
T KOG4257|consen 541 LEDDAY--------------------------YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQ 594 (974)
T ss_pred ccccch--------------------------hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccc
Confidence 753321 11122234668999999999999999999999999999985 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
+-.+.+++-.+.++ -.+|.++.|++.+..|+.+||.++|.+||.+.+.
T Consensus 595 gvkNsDVI~~iEnG-eRlP~P~nCPp~LYslmskcWayeP~kRPrftei 642 (974)
T KOG4257|consen 595 GVKNSDVIGHIENG-ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI 642 (974)
T ss_pred cccccceEEEecCC-CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence 98887777666554 3566677789999999999999999999998753
No 385
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-32 Score=303.89 Aligned_cols=253 Identities=23% Similarity=0.327 Sum_probs=211.6
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..+...++++||+|.||.|.+|.. ..+.+||+|.++... .......|..|+++|.+|+||||+.+++++..++.+
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi 610 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL 610 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch
Confidence 35567889999999999999999997 336899999998764 344567899999999999999999999999999999
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||++|+|.+++.......+.......|+.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++.+...
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC
Confidence 99999999999999998764444455666779999999999999999999999999999999999999999999754422
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH--cCCCCCCCCC
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML--YGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ell--tG~~Pf~~~~ 902 (1002)
+. .+.....+-...|||+|.+..+.++.+||+|+||+++||++ +..-||...+
T Consensus 691 ~y-------------------------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt 745 (807)
T KOG1094|consen 691 DY-------------------------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT 745 (807)
T ss_pred Cc-------------------------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh
Confidence 11 11223446678999999999999999999999999999987 5788999888
Q ss_pred hHHHHHHHHhC---C---CCCCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001865 903 RQKTFANILHK---D---LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 903 ~~~~~~~i~~~---~---~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
+...+.+.-.- . .-++.+.-++..+.+||.+||.++-.+||++
T Consensus 746 ~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsF 794 (807)
T KOG1094|consen 746 DEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSF 794 (807)
T ss_pred HHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCH
Confidence 88777665321 1 1123344578889999999999999999994
No 386
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=288.00 Aligned_cols=263 Identities=27% Similarity=0.431 Sum_probs=213.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCC-----eE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (1002)
+.+-.+.||.|+||+||.+.|..+|+.||+|.+..- +..-...+++.+|+.+|...+|.||+..+++.+..+ .+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 455668899999999999999999999999988542 445566788999999999999999999998876543 57
Q ss_pred EEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCC
Q 001865 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+++|+| ..+|...+-. ...++.++++-++.||+.||+|||+.||.||||||.|+|+++|..+||||||+++....+
T Consensus 133 YV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 8999999 7788877744 345999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001865 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
... ..+..+-|-+|+|||.+.|. .|+.+.||||.|||+.||+..+..|...++
T Consensus 210 ~~~--------------------------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 210 DRL--------------------------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred hhh--------------------------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 211 12334678899999999886 578899999999999999999999988776
Q ss_pred HHHHHHHHh-----------------------CCCCCCCCC---------CCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 904 QKTFANILH-----------------------KDLKFPSST---------PTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 904 ~~~~~~i~~-----------------------~~~~~~~~~---------~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+.+..|.. +....|... ....+...++.+||..||++|++ ..+
T Consensus 264 iqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris----~~~ 339 (449)
T KOG0664|consen 264 IEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS----VEE 339 (449)
T ss_pred HHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc----Hhh
Confidence 655554422 222222221 12335678999999999999999 999
Q ss_pred HHcCCCcCCCChhhh
Q 001865 952 IKKHPFFKGVNWALV 966 (1002)
Q Consensus 952 lL~Hp~f~~~~~~~~ 966 (1002)
++.|+|+...-+.-+
T Consensus 340 A~~~~~~~e~R~r~~ 354 (449)
T KOG0664|consen 340 ALQHRYLEEGRLRFH 354 (449)
T ss_pred hcccccccccceeee
Confidence 999999987555444
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=3e-31 Score=309.98 Aligned_cols=266 Identities=18% Similarity=0.203 Sum_probs=192.4
Q ss_pred ccccCCccccccccccCcEEEEEEEEc----------------CCCeEEEEEEeecccccChH-----------HHHHHH
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELC----------------GSGQYFAMKAMDKGVMLNRN-----------KVHRAC 717 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~----------------~~~~~~avK~~~~~~~~~~~-----------~~~~~~ 717 (1002)
.+..++|.+.++||+|+||+||++.+. ..++.||||.+......... ..+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 356789999999999999999999752 23567999998643211000 011233
Q ss_pred HHHHHHHhCCCCC-----cceeEEEEee--------CCeEEEEEeccCCCchhHHHhhCC--------------------
Q 001865 718 AEREILDMLDHPF-----VPALYASFQT--------KTHVCLITDYCPGGELFLLLDRQP-------------------- 764 (1002)
Q Consensus 718 ~E~~il~~l~hpn-----Iv~l~~~~~~--------~~~~~lV~E~~~ggsL~~~l~~~~-------------------- 764 (1002)
.|+.++.++.|.+ ++.++++|.. .+..|+||||+.+++|.+++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 4666777776654 3666666642 356899999999999999886421
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCC
Q 001865 765 --TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 842 (1002)
Q Consensus 765 --~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 842 (1002)
...++...++.++.||+.+|.|||+++|+||||||+|||++.++.+||+|||++........
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---------------- 364 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---------------- 364 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----------------
Confidence 11245678899999999999999999999999999999999999999999999854321100
Q ss_pred CCCcccccccccccccccCCcccccccccCCCC--------------------C--ChhhHHHHHHHHHHHHcCCC-CCC
Q 001865 843 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH--------------------T--SAVDWWALGILLYEMLYGYT-PFR 899 (1002)
Q Consensus 843 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~--------------------~--~~sDIwSlGvil~elltG~~-Pf~ 899 (1002)
.......+|+.|+|||.+..... + .+.||||+||++|+|++|.+ ||.
T Consensus 365 ----------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 365 ----------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ----------cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 00112245889999999854321 1 24699999999999999886 775
Q ss_pred CCC-----------hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCc---CCCCCChhcHHHHHcCCCcCC
Q 001865 900 GKT-----------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDP---KSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 900 ~~~-----------~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP---~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.. ....++.+......++.....+..+++|+.+||..+| .+|+| +.|+|+||||..
T Consensus 435 ~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlS----a~eaL~Hp~f~~ 505 (507)
T PLN03224 435 NIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLS----VGQALSHRFFLP 505 (507)
T ss_pred chhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCC----HHHHhCCCCcCC
Confidence 421 1112222333445566566678899999999999876 68999 999999999964
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=4.7e-31 Score=282.70 Aligned_cols=242 Identities=43% Similarity=0.719 Sum_probs=203.9
Q ss_pred CcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCchhHHH
Q 001865 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 760 (1002)
Q Consensus 681 ~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 760 (1002)
+||.||++.+..+++.+|+|++........ ...+.+|+.++++++|+||+++++++......+++|||+.+++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999988899999999976532221 578889999999999999999999999999999999999888999998
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 001865 761 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (1002)
Q Consensus 761 ~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (1002)
..... ++...+..++.+++.+|.|||+.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------------- 141 (244)
T smart00220 79 KKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------------- 141 (244)
T ss_pred HhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---------------
Confidence 76432 8999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CChHHHHHHHHhCCCCCCC
Q 001865 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKFPS 919 (1002)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~ 919 (1002)
......++..|++||.+.+..++.++||||||+++|+|++|..||.. .........+.........
T Consensus 142 -------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 208 (244)
T smart00220 142 -------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP 208 (244)
T ss_pred -------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc
Confidence 12234688899999999888889999999999999999999999987 4444444444433333322
Q ss_pred CCC-CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 920 STP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 920 ~~~-~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
... .+..+.+++.+||..+|++||+ +.++++||||
T Consensus 209 ~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~~~~~~~ 244 (244)
T smart00220 209 PEWKISPEAKDLIRKLLVKDPEKRLT----AEEALQHPFF 244 (244)
T ss_pred ccccCCHHHHHHHHHHccCCchhccC----HHHHhhCCCC
Confidence 222 6788999999999999999999 9999999997
No 389
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=312.62 Aligned_cols=260 Identities=24% Similarity=0.327 Sum_probs=224.4
Q ss_pred ccccccccCCccccccccccCcEEEEEEEEcCCCe---EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEE
Q 001865 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (1002)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~ 737 (1002)
.....|+....++.+.||.|.||.||.++.+..|+ .||||.++... .......|+.|+.||-+.+||||++|.++
T Consensus 621 eFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGV 698 (996)
T KOG0196|consen 621 EFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGV 698 (996)
T ss_pred HhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEE
Confidence 33445777788999999999999999999977764 69999998763 34456789999999999999999999999
Q ss_pred EeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccC
Q 001865 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
......++||+|||++|+|..+|+.+. +.++..++-.+++.|+.|++||-++|.|||||...|||++++-.||++|||+
T Consensus 699 VTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 699 VTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred EecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccc
Confidence 999999999999999999999998875 4489999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH-cCCC
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ell-tG~~ 896 (1002)
++.+..++...+.+ ..---...|.|||++...+++.+|||||+|++|||.+ +|..
T Consensus 778 SRvledd~~~~ytt------------------------~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGER 833 (996)
T KOG0196|consen 778 SRVLEDDPEAAYTT------------------------LGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 833 (996)
T ss_pred eeecccCCCccccc------------------------cCCccceeecChhHhhhcccCchhhccccceEEEEecccCCC
Confidence 98775544211110 0111246799999999999999999999999999988 5999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001865 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
||...++.++++.|.++ ..+|.+..++..+.+|+..||++|-.+||.+.++
T Consensus 834 PYWdmSNQdVIkaIe~g-yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qi 884 (996)
T KOG0196|consen 834 PYWDMSNQDVIKAIEQG-YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQI 884 (996)
T ss_pred cccccchHHHHHHHHhc-cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHH
Confidence 99999999999888765 5666667789999999999999999999997654
No 390
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=1.2e-31 Score=289.70 Aligned_cols=280 Identities=25% Similarity=0.375 Sum_probs=206.7
Q ss_pred cCCccccccccccCcEEEEEEEEcC---CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCe
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
...|+++.+||+|.|++||++.+.. ..++||+|.+... +...++.+|+++|..+ .+.||+.+.+++..++.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 4689999999999999999999977 7889999988754 3456789999999988 79999999999999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEe-cCCcEEEEeccCCcccC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~-~~g~vkL~DFG~a~~~~ 822 (1002)
+++||||++.....+++.. ++...++.+++.++.||.++|.+|||||||||+|+|++ ..+.-.|+|||+|....
T Consensus 110 v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred eEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHH
Confidence 9999999999999999865 78899999999999999999999999999999999998 46788999999996311
Q ss_pred CCCCCC----------CC-cchh-hhhcccCCCCCc-cc----ccccccccccccCCcccccccccCC-CCCChhhHHHH
Q 001865 823 CKPQLL----------LP-TTNE-KKRRHKGQQNPV-FM----AEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWAL 884 (1002)
Q Consensus 823 ~~~~~~----------~~-~~~~-~~~~~~~~~~~~-~~----~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSl 884 (1002)
...... .+ .... ......+...|. .. ...........||++|.|||++... ..++++||||.
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 100000 00 0000 000000000000 00 1111223456899999999999765 46889999999
Q ss_pred HHHHHHHHcCCCCCCCCCh-HHHHHHH--------------HhCC---------------------C----CCC------
Q 001865 885 GILLYEMLYGYTPFRGKTR-QKTFANI--------------LHKD---------------------L----KFP------ 918 (1002)
Q Consensus 885 Gvil~elltG~~Pf~~~~~-~~~~~~i--------------~~~~---------------------~----~~~------ 918 (1002)
|+|+..+++++.||..... ...+..+ +.+. + ..+
T Consensus 265 GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~ 344 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNT 344 (418)
T ss_pred cceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccce
Confidence 9999999999999954211 1111000 0011 0 000
Q ss_pred ----CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 919 ----SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 919 ----~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.....+..+.+|+.+||..||.+|+| |+++|+||||...
T Consensus 345 ~~~~~~d~~~~~~~dlLdk~le~np~kRit----AEeALkHpFF~~~ 387 (418)
T KOG1167|consen 345 EREIGSDVFPALLLDLLDKCLELNPQKRIT----AEDALKHPFFDEA 387 (418)
T ss_pred eeccccccccHHHHHHHHHHccCChhhccc----HHHHhcCcCCcch
Confidence 00112447889999999999999999 9999999999964
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-31 Score=258.55 Aligned_cols=224 Identities=26% Similarity=0.403 Sum_probs=185.0
Q ss_pred cccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHh-CCCCCcceeEEEEee
Q 001865 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM-LDHPFVPALYASFQT 740 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~ 740 (1002)
.+-.+.-+....+..||+|++|.|-+.++..+|...|+|.++... .....+++.+|+.+..+ ..+|++|.+|+.+..
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r 116 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR 116 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc
Confidence 334455667778889999999999999999999999999997642 34445677788887655 489999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccC
Q 001865 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
.+.+++.||.| ..||..+.++ ..+..+++..+-.|+..++.||.|||++ .|||||+||+|||++.+|++|+||||.
T Consensus 117 egdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 117 EGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999999 8888777654 2456799999999999999999999986 999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC----CCCCChhhHHHHHHHHHHHHc
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~----~~~~~~sDIwSlGvil~ellt 893 (1002)
+..+..+ ...+...|.-.|||||.+.. ..|+.++||||||+++.||.+
T Consensus 196 sG~L~dS----------------------------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~ 247 (282)
T KOG0984|consen 196 SGYLVDS----------------------------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI 247 (282)
T ss_pred ceeehhh----------------------------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence 8654321 11122457888999999843 368889999999999999999
Q ss_pred CCCCCCC-CChHHHHHHHHhCCCC
Q 001865 894 GYTPFRG-KTRQKTFANILHKDLK 916 (1002)
Q Consensus 894 G~~Pf~~-~~~~~~~~~i~~~~~~ 916 (1002)
++.||.. .++.+.++++.....+
T Consensus 248 lr~PY~~w~tpF~qLkqvVeep~P 271 (282)
T KOG0984|consen 248 LRFPYESWGTPFQQLKQVVEEPSP 271 (282)
T ss_pred ccccccccCCHHHHHHHHhcCCCC
Confidence 9999975 5677778887776443
No 392
>PRK13560 hypothetical protein; Provisional
Probab=99.97 E-value=2e-29 Score=319.67 Aligned_cols=411 Identities=12% Similarity=0.090 Sum_probs=301.5
Q ss_pred ccccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCCh
Q 001865 168 VRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDP 247 (1002)
Q Consensus 168 ~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~ 247 (1002)
.....|||++++++++|+++++.|+.++++++++++++|. +|+|+++|+++++++||+.+|++|+++..+.++....
T Consensus 183 ~g~~~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~ 259 (807)
T PRK13560 183 DGFAEDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE---DAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPAD 259 (807)
T ss_pred EEEEEccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC---CCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhH
Confidence 3445899999999999999999999999999999999998 7889999999999999999999999998887766544
Q ss_pred HHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEe--eeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhh
Q 001865 248 EDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI--APIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLI 325 (1002)
Q Consensus 248 ~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~--~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~~~~~l~~~l~ 325 (1002)
.........+..++....+.+.+++||+.+|+.+.+ .|+.|.+|.+.+++++++|||++|++|++|+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se-------- 331 (807)
T PRK13560 260 DYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVGAITDISGRRAAERELLEKE-------- 331 (807)
T ss_pred HHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEEEEEechHHHHHHHHHHHHH--------
Confidence 443445555667777778888999999999776654 5667899999999999999999999999987421
Q ss_pred hHHHHHHHHhhhhHHHHHHHhc-CCCCcccCCCCCcc-cccCCCCchhhhcccccCCCCCCCCCCCCCC--------CCC
Q 001865 326 RYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPI-IRKSEGGVEEERAGALGRRKSENVPPPRRNS--------YGG 395 (1002)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~ 395 (1002)
+....+..+.. .+...+.......+ +..+...+|++.+++.|+......|...... +..
T Consensus 332 -----------~~l~~l~~~~~~~i~~~d~~g~i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (807)
T PRK13560 332 -----------DMLRAIIEAAPIAAIGLDADGNICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPD 400 (807)
T ss_pred -----------HHHHHHHHhCcccEEEEcCCCCEEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCc
Confidence 11122222222 22334444444444 4456678999999999988765543211100 000
Q ss_pred Cc------------ccccccccccchhhccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHH
Q 001865 396 GC------------RTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKV 463 (1002)
Q Consensus 396 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 463 (1002)
.. ................++|...|+...+.+..+.++....... ...|+|+|+.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~-------------~~~DITerk~ 467 (807)
T PRK13560 401 GRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIA-------------LLVDITERKQ 467 (807)
T ss_pred CCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEE-------------EeehhhhHHH
Confidence 00 0111122223444556677777887777777776665443333 3679999999
Q ss_pred HHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCC--CccccCCCCChHHHHHHHHHHh
Q 001865 464 RQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAID 541 (1002)
Q Consensus 464 ~e~~l~~~~~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~--~~~l~~~d~~~~~~~~l~~~l~ 541 (1002)
.|++++. .+.++++++++++.++..+ +..+.+|.....++||+++|+++.. +..+++|++.......+...+.
T Consensus 468 ~E~~L~~---~~~~~e~~~~~i~~~~~~~--~~~~~~~~~~~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~~~ 542 (807)
T PRK13560 468 VEEQLLL---ANLIVENSPLVLFRWKAEE--GWPVELVSKNITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEFAA 542 (807)
T ss_pred HHHHHHH---HHHHHhcCCceEEEEecCC--CceEEEecchhhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHHHh
Confidence 9999987 6789999999999888652 2255566666788999999998643 5567788888777777777666
Q ss_pred cC-CcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccCCchhhHHHHHHHHHHHhhhhhhhh
Q 001865 542 NQ-TDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAV 620 (1002)
Q Consensus 542 ~~-~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~k~~~~~v~~~~ 620 (1002)
.+ ..+..++++.++||..+|+.....|++|++|.+.+++|+++|||+||++|++++ ...++...++..++|.+++.+
T Consensus 543 ~g~~~~~~e~r~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~aE~~L~--~a~~~~~~~l~~isHelrnpL 620 (807)
T PRK13560 543 QGVDRFEQEYRILGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHAEEKIK--AALTEKEVLLKEIHHRVKNNL 620 (807)
T ss_pred cCCccceeEEEEEcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHHHHHHH--HHHHHHHHHHHHhHHHHhChH
Confidence 55 457889999999999999999999999999999999999999999999654432 334445555555555555444
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-31 Score=303.84 Aligned_cols=252 Identities=28% Similarity=0.414 Sum_probs=199.2
Q ss_pred CccccccccccCcEE-EEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCCeEEEE
Q 001865 670 HFRPIKPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~-Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV 747 (1002)
-|.-.+.+|.|+.|+ ||++.. .|+.||||.+-.+ ...-..+|+.+|+.- .||||+++|+.-.+....||.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa 581 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA 581 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence 355567789999875 798887 7889999977432 345667899999887 799999999999999999999
Q ss_pred EeccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec---CC--cEEEEeccCCcc
Q 001865 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NG--HVSLTDFDLSCL 820 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~---~g--~vkL~DFG~a~~ 820 (1002)
.|+| ..+|.+++... ..........+.++.|++.||++||+.+||||||||.||||+. ++ .++|+|||+++.
T Consensus 582 lELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 582 LELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred ehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 9999 89999999863 1111222445778899999999999999999999999999986 34 689999999977
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
+...... .....+..||-+|+|||++.....+.++|||||||++|+.++ |..||.
T Consensus 661 l~~~~sS------------------------~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 661 LAGGKSS------------------------FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred cCCCcch------------------------hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence 6543221 112445679999999999999888889999999999999997 489997
Q ss_pred CCChHHHHHHHHhCCCCCCCCCC-CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 900 GKTRQKTFANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~-~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..... -.+|+.+...+-...+ ...++.+||.+||.++|..||+ |.++|.||||=.
T Consensus 717 d~~~R--~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPs----a~~VL~HPlFW~ 772 (903)
T KOG1027|consen 717 DSLER--QANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPS----ATDVLNHPLFWD 772 (903)
T ss_pred chHHh--hhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCC----HHHHhCCCccCC
Confidence 64333 2356666544322211 1128899999999999999999 999999999954
No 394
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-31 Score=297.66 Aligned_cols=276 Identities=26% Similarity=0.409 Sum_probs=231.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|.++..+|+|.||.||+++++.+++..|+|+++.. ....+.-+.+|+-+++-.+|||||.+++.|...+..+++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 46899999999999999999999999999999999854 345567778899999999999999999999999999999
Q ss_pred EeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||.||+|++...- ...+++.++..+++..++||+|||+.|-+|||||-.||++++.|.+||.|||.+..+..
T Consensus 91 MEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita---- 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA---- 164 (829)
T ss_pred EEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh----
Confidence 999999999998754 46799999999999999999999999999999999999999999999999999854321
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccc---cCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l---~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
......++.||++|||||+- ....|...+|||++|++..++-.-++|.......
T Consensus 165 -----------------------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm 221 (829)
T KOG0576|consen 165 -----------------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM 221 (829)
T ss_pred -----------------------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH
Confidence 11234568999999999996 4566888999999999999999888887776666
Q ss_pred HHHHHHHhCCCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC-----ChhhhhccCCCCCCC
Q 001865 905 KTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV-----NWALVRCMNPPELDA 976 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~-----~~~~~~~~~~~~~~~ 976 (1002)
.....+-+..++.| +....+..+-+|++.+|.++|.+||+ ++.+|.|||...- .-+++...+.|-..+
T Consensus 222 r~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpt----aeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v 297 (829)
T KOG0576|consen 222 RALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPT----AEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVV 297 (829)
T ss_pred HHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCC----hhhheeceeeccchhhHHHHHHHHHccCCCCcc
Confidence 66655555555444 34456788899999999999999999 9999999999873 233445555565444
Q ss_pred CCC
Q 001865 977 PLF 979 (1002)
Q Consensus 977 p~~ 979 (1002)
..+
T Consensus 298 ~~~ 300 (829)
T KOG0576|consen 298 RYL 300 (829)
T ss_pred ccc
Confidence 433
No 395
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.4e-30 Score=291.47 Aligned_cols=253 Identities=23% Similarity=0.297 Sum_probs=213.7
Q ss_pred CccccccccccCcEEEEEEEEcCCCe----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
..+..++||+|+||+||++.+...|+ +||+|++... ........+..|+-+|.+|+|||++++++++.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 46677899999999999999866655 6889988754 34555678899999999999999999999998765 88
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
||++||+.|+|.++++.. ...+-....+.|+.||++||.|||.++++||||-..|+|+.+-.++||.|||+|+....+.
T Consensus 774 lvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999999999875 3558888999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
... ......-.+.|||-|.+....|+.++|||||||++||++| |..||.+....
T Consensus 853 ~ey-------------------------~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~ 907 (1177)
T KOG1025|consen 853 KEY-------------------------SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE 907 (1177)
T ss_pred ccc-------------------------cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence 211 1111223567999999999999999999999999999996 99999998776
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001865 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
++- ++++..-.++.++.++.++.-++.+||..|+..||++++.++++
T Consensus 908 eI~-dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 908 EIP-DLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred Hhh-HHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 654 55555555888888999999999999999999999988766654
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=286.34 Aligned_cols=202 Identities=31% Similarity=0.499 Sum_probs=177.8
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHH-----HHHHHHHHHHHHhCC---CCCcceeEEEEe
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----VHRACAEREILDMLD---HPFVPALYASFQ 739 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~-----~~~~~~E~~il~~l~---hpnIv~l~~~~~ 739 (1002)
..+|..++.||+|+||.|++|.++++...|+||.+.|..+..... ...+-.||.||..|+ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 457999999999999999999999999999999998765433222 233557999999997 999999999999
Q ss_pred eCCeEEEEEecc-CCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCC
Q 001865 740 TKTHVCLITDYC-PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 740 ~~~~~~lV~E~~-~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+++++||+||-. +|.+|++++... ..+++..++.|++|++.|+++||+.||||||||-+|+.++.+|-+||+|||.|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 999999999987 467999999875 45999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~P 897 (1002)
.... +.....++||..|.|||++.|.+| +..-|||+||++||.++....|
T Consensus 718 a~~k-----------------------------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp 768 (772)
T KOG1152|consen 718 AYTK-----------------------------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP 768 (772)
T ss_pred hhhc-----------------------------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence 5532 233467899999999999999876 5678999999999999999999
Q ss_pred CCC
Q 001865 898 FRG 900 (1002)
Q Consensus 898 f~~ 900 (1002)
|+.
T Consensus 769 yyn 771 (772)
T KOG1152|consen 769 YYN 771 (772)
T ss_pred CcC
Confidence 864
No 397
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-28 Score=298.11 Aligned_cols=264 Identities=25% Similarity=0.347 Sum_probs=215.7
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcC-------CCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCccee
Q 001865 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 734 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l 734 (1002)
.+.+......+.+.||+|.||.|+++.... ....||||.++.... ......+..|+++|+.+ .|+||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 445666667778899999999999997531 145799999986543 36678899999999999 69999999
Q ss_pred EEEEeeCCeEEEEEeccCCCchhHHHhhCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCC
Q 001865 735 YASFQTKTHVCLITDYCPGGELFLLLDRQP------------T--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (1002)
Q Consensus 735 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~--~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~ 800 (1002)
++++...+.+++|+||+..|+|..++.... . ..++...+..++.||+.|++||++.++|||||-..
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999998754 0 13889999999999999999999999999999999
Q ss_pred cEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccc--cCCcccccccccCCCCCCh
Q 001865 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV--GTEEYIAPEIIAGAGHTSA 878 (1002)
Q Consensus 801 NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Gt~~Y~aPE~l~~~~~~~~ 878 (1002)
|||+..+..+||+|||+|+....+.... ..... -...|||||.+....|+.+
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~--------------------------~~~~~~~LP~kWmApEsl~~~~ft~k 501 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYR--------------------------TKSSAGTLPVKWMAPESLFDRVFTSK 501 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceE--------------------------ecCCCCccceeecCHHHhccCccccc
Confidence 9999999999999999997543221110 00111 2345999999999999999
Q ss_pred hhHHHHHHHHHHHHc-CCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001865 879 VDWWALGILLYEMLY-GYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 879 sDIwSlGvil~ellt-G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+||||+|++|||+++ |..||++.. ..+.+. .++.......+..++.++.++++.||+.+|++||++.+..+.+-.|
T Consensus 502 SDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 502 SDVWSFGILLWEIFTLGGTPYPGIPPTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred chhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 999999999999997 999999865 455544 5555445555556799999999999999999999988776666554
No 398
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=7.7e-29 Score=320.03 Aligned_cols=239 Identities=20% Similarity=0.295 Sum_probs=184.7
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|...+.||+|+||.||+|.+..++..||+|.+..... ....|++++++++|||||++++++...+..|+||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 356777889999999999999988999999998864321 1124578899999999999999999999999999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH---CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH---~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
|||++|+|.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 763 Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~--- 833 (968)
T PLN00113 763 EYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC--- 833 (968)
T ss_pred eCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc---
Confidence 99999999999953 788999999999999999999 6699999999999999988887775 66542211
Q ss_pred CCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR-- 903 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~-- 903 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 834 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~ 885 (968)
T PLN00113 834 ----------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH 885 (968)
T ss_pred ----------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCC
Confidence 01123688999999999999999999999999999999999999854211
Q ss_pred ---HHHHHHHHhC-------CCCCCCC----CCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 904 ---QKTFANILHK-------DLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 904 ---~~~~~~i~~~-------~~~~~~~----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+........ ....... .....++.+++.+||+.||++||++.++++.
T Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 886 GSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred CcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 1111110000 0000000 1112346789999999999999995554443
No 399
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-28 Score=265.90 Aligned_cols=244 Identities=23% Similarity=0.352 Sum_probs=189.6
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--CCCCCcceeEEEEeeCC--
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT-- 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~-- 742 (1002)
+....+++..||+|.||.||+|.. +++.||||++.. .....+.+|.+|.+. +.|+||++++++-....
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 356778889999999999999998 668999999863 456778888888775 48999999998876544
Q ss_pred --eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------CcccCCCCCCcEEEecCCcEE
Q 001865 743 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~---------gIiHrDLKP~NILl~~~g~vk 811 (1002)
.++||++|.+.|+|.+||+.+ .+++.....|+.-|+.||+|||+- .|+|||||..|||+.+|+++.
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 789999999999999999874 489999999999999999999973 599999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-CC-----ChhhHHHHH
Q 001865 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-----SAVDWWALG 885 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~-~~-----~~sDIwSlG 885 (1002)
|+|||+|..+... .+.......+||..|||||+|.+.. +. .+.||||+|
T Consensus 357 IaDFGLAl~~~p~-------------------------~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 357 IADFGLALRLEPG-------------------------KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG 411 (534)
T ss_pred eeccceeEEecCC-------------------------CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence 9999999665411 1122334479999999999996642 11 378999999
Q ss_pred HHHHHHHcCCCC------------CC-----CCChHHHHHHHHh--CCCCCCCCCC---CCHHHHHHHHHccccCcCCCC
Q 001865 886 ILLYEMLYGYTP------------FR-----GKTRQKTFANILH--KDLKFPSSTP---TSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 886 vil~elltG~~P------------f~-----~~~~~~~~~~i~~--~~~~~~~~~~---~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
.+|||+++.... |. ..+..++...+++ .+..+|..-. .-..+.+.+..||..||+.|+
T Consensus 412 LVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARL 491 (534)
T KOG3653|consen 412 LVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARL 491 (534)
T ss_pred HHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhh
Confidence 999999974432 22 1222333333333 3344443211 223567899999999999999
Q ss_pred CCh
Q 001865 944 GSH 946 (1002)
Q Consensus 944 t~~ 946 (1002)
|+-
T Consensus 492 TA~ 494 (534)
T KOG3653|consen 492 TAG 494 (534)
T ss_pred hhH
Confidence 954
No 400
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-28 Score=261.95 Aligned_cols=243 Identities=23% Similarity=0.359 Sum_probs=183.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHh--CCCCCcceeEEEEeeCC----
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~---- 742 (1002)
.+..+++.||+|.||.||++.+ .|..||||++... .-....+|.+|.+. |+|+||+.+++.-..++
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 4678899999999999999999 7889999999743 23456777777664 59999999988755332
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CcccCCCCCCcEEEecCCcEEEEe
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~--------gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
.+|||++|.+.|||+|||.+. .++.+....++.-++.||+|||.. .|.|||||..|||+.++|.|-|+|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 689999999999999999884 489999999999999999999963 499999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCC------CChhhHHHHHHHH
Q 001865 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILL 888 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~------~~~sDIwSlGvil 888 (1002)
+|+|-......... ....+..+||-.|||||+|..... -..+||||||+++
T Consensus 360 LGLAv~h~~~t~~i-----------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl 416 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTI-----------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL 416 (513)
T ss_pred ceeeEEecccCCcc-----------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence 99996543321110 112345689999999999965421 2379999999999
Q ss_pred HHHHc----------CCCCCCCC----ChHHHHHHHHh-C--CCCCCCCCCCCH---HHHHHHHHccccCcCCCCCC
Q 001865 889 YEMLY----------GYTPFRGK----TRQKTFANILH-K--DLKFPSSTPTSL---HAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 889 ~ellt----------G~~Pf~~~----~~~~~~~~i~~-~--~~~~~~~~~~s~---~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
||++. -++||.+- ...+.+.+++- . +...|..-...+ .+-+|++.||..||..|.|+
T Consensus 417 WEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 417 WEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred HHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 99883 24677642 22333333321 2 222332222223 34578999999999999993
No 401
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.95 E-value=1.1e-27 Score=313.61 Aligned_cols=380 Identities=15% Similarity=0.136 Sum_probs=278.1
Q ss_pred ccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHH
Q 001865 176 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (1002)
Q Consensus 176 ~~~~~e~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~ 255 (1002)
..+..++.++++++.++.++++++++|+++|. +|+|+++|+++++++||+.+|++|+++..+.++++.......+..
T Consensus 270 ~~r~~~~~l~~~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~ 346 (1092)
T PRK09776 270 AFRAERKHISESETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 346 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHH
Confidence 34445667888999999999999999999998 888999999999999999999999998887777765555555555
Q ss_pred HHHcC-CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHH
Q 001865 256 TLQNG-QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEM 334 (1002)
Q Consensus 256 ~l~~g-~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~ 334 (1002)
.+..+ ..+..+.+..++||+.+|+..+..++++.+|.+.+++++++|||++|++|++++...
T Consensus 347 ~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~----------------- 409 (1092)
T PRK09776 347 LLSGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLM----------------- 409 (1092)
T ss_pred HHcCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHH-----------------
Confidence 44433 346778889999999999999999999999999999999999999999998877311
Q ss_pred hhhhHHHHHHHh-cCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCC---cccccccccccchh
Q 001865 335 ATSSVTELVQAM-KKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG---CRTSMQRISEVPEK 410 (1002)
Q Consensus 335 ~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 410 (1002)
+....+.++. ......+.......+|......+|++.++..+...-..+-++........ ...........+.+
T Consensus 410 --~~~~~~~~~~~~~i~~~d~~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r 487 (1092)
T PRK09776 410 --ERITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDRQRVEKEIRDALQGRSPFKLEFR 487 (1092)
T ss_pred --HHHHHHHHhcCceEEEEecCCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 1111122221 12344455555666777766777777655332111111111111000000 00011123345666
Q ss_pred hccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhc-ccHHHHHHhccccEEEEc
Q 001865 411 KKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITD 489 (1002)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~-~~l~~i~e~~~~~I~i~D 489 (1002)
...++| ..|+...+....+.++.......+ ..|+|+|+..++++++. ..++.++++++++|+++|
T Consensus 488 ~~~~dG-~~w~~~~~~~~~d~~G~~~~~ig~-------------~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~~D 553 (1092)
T PRK09776 488 IVVKDG-VRHIRALANRVLNKDGEVERLLGI-------------NMDMTEVRQLNEALFQEKERLHITLDSIGEAVVCTD 553 (1092)
T ss_pred EEcCCc-eEEEEEeeEEEECCCCCEEEEEee-------------eeehhHHHHHHHHHHHHHHHHHHHHhccccEEEEEC
Confidence 778888 888888877777766655443333 68999999999999766 679999999999999999
Q ss_pred CCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCC--CChHHHHHHHHHHhcCCc--EEEEEEEEecCCcEEEEEEE
Q 001865 490 PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE--TDPATVRKIRAAIDNQTD--VTVQLINYTKSGKKFWNLFH 565 (1002)
Q Consensus 490 ~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d--~~~~~~~~l~~~l~~~~~--~~~e~~~~~kdG~~~wv~~~ 565 (1002)
.+|. |+++|+++++++||+.+|++|+++..+.+.. ........+......... ...+....++||..+|+..+
T Consensus 554 ~~g~---i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 630 (1092)
T PRK09776 554 MAMK---VTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHYS 630 (1092)
T ss_pred CCCe---EEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEEE
Confidence 9888 9999999999999999999999976654322 222222334444444433 55677889999999999999
Q ss_pred EEeeecCCCCEEEEEEEEecCCccccccc
Q 001865 566 LQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 566 ~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
..|+++.+|++.+++++++|||++|+.++
T Consensus 631 ~~pi~~~~g~~~g~v~~~~DITe~k~~e~ 659 (1092)
T PRK09776 631 ITPLSTLDGENIGSVLVIQDVTESRKMLR 659 (1092)
T ss_pred eeeeecCCCCEEEEEEEEEecchHHHHHH
Confidence 99999999999999999999999998543
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=3.8e-26 Score=238.33 Aligned_cols=213 Identities=39% Similarity=0.646 Sum_probs=185.0
Q ss_pred ccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCch
Q 001865 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|++|.||++.+..+++.+++|++....... ....+.+|+.+++.+.|++|+++++++......+++|||+.+++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987653211 346788999999999999999999999999999999999988999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-CCcEEEEeccCCcccCCCCCCCCCcchhh
Q 001865 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEK 835 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~ 835 (1002)
.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------- 148 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------
Confidence 99987642 35899999999999999999999999999999999999998 89999999999865432110
Q ss_pred hhcccCCCCCcccccccccccccccCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001865 836 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (1002)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (1002)
......+...|++||.+... .++.+.|+|+||+++++|
T Consensus 149 ------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------- 187 (215)
T cd00180 149 ------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------- 187 (215)
T ss_pred ------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------
Confidence 11234578899999999877 778899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001865 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
..+.+++.+||..+|++||+ +.++++|+
T Consensus 188 ----------~~~~~~l~~~l~~~p~~R~~----~~~l~~~~ 215 (215)
T cd00180 188 ----------PELKDLIRKMLQKDPEKRPS----AKEILEHL 215 (215)
T ss_pred ----------HHHHHHHHHHhhCCcccCcC----HHHHhhCC
Confidence 46889999999999999999 89999875
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.3e-25 Score=238.16 Aligned_cols=215 Identities=37% Similarity=0.603 Sum_probs=180.3
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..++.++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 66788999999999999999888999999999865322 2567888899999999999999999999999999999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCC
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+++++|.+++..... .++...+..++.+++.+|.+||+++++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~----- 152 (225)
T smart00221 79 CEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL----- 152 (225)
T ss_pred cCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----
Confidence 999999999976432 17899999999999999999999999999999999999999999999999886543211
Q ss_pred cchhhhhcccCCCCCcccccccccccccccCCcccccccc-cCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CChH-HHH
Q 001865 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQ-KTF 907 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l-~~~~~~~~sDIwSlGvil~elltG~~Pf~~-~~~~-~~~ 907 (1002)
........++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .+.. .+.
T Consensus 153 ---------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~ 211 (225)
T smart00221 153 ---------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLS 211 (225)
T ss_pred ---------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHH
Confidence 0011234678899999998 666778899999999999999999999987 4555 444
Q ss_pred HHHHhCC
Q 001865 908 ANILHKD 914 (1002)
Q Consensus 908 ~~i~~~~ 914 (1002)
..+..+.
T Consensus 212 ~~~~~~~ 218 (225)
T smart00221 212 DVWSFGV 218 (225)
T ss_pred HHHhcCC
Confidence 4444443
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-26 Score=236.29 Aligned_cols=254 Identities=23% Similarity=0.335 Sum_probs=193.3
Q ss_pred cCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEE-EeeCCeEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS-FQTKTHVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~-~~~~~~~~ 745 (1002)
.+.|.+.+.||+|-||.+.+|+++.++..+|+|.+.+.. .....|.+|...--.| .|.||+..|+. |+..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 368999999999999999999999999999999988753 3456777777654444 58999988774 77888899
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEe--cCCcEEEEeccCCcccCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~--~~g~vkL~DFG~a~~~~~ 823 (1002)
+++||++-|+|..-+... .+-+.-.+.++.|++.|+.|||++++||||||.+||||- +...+||||||+++..+.
T Consensus 99 F~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999999888653 378899999999999999999999999999999999995 344799999998854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-----CCCChhhHHHHHHHHHHHHcCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-----~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
- -....-+..|.+||.+... ...+.+|||.||+++|.+++|++||
T Consensus 176 t------------------------------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PW 225 (378)
T KOG1345|consen 176 T------------------------------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPW 225 (378)
T ss_pred e------------------------------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcc
Confidence 0 0112245679999987432 2466899999999999999999999
Q ss_pred CCCC----hHHHHHHHHhC-CCCCCC-CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 899 RGKT----RQKTFANILHK-DLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 899 ~~~~----~~~~~~~i~~~-~~~~~~-~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
.... ..-.+.+...+ .+..|. ..+.++.+..+.++-|..+|+.|....+ +....+.-|..
T Consensus 226 Qka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~-~kk~rk~~w~E 291 (378)
T KOG1345|consen 226 QKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT-AKKMRKCLWKE 291 (378)
T ss_pred hhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHH-HHHHHHHHHHH
Confidence 7532 22223333333 334443 3457888999999999999999944222 33444444443
No 405
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93 E-value=2.3e-25 Score=236.72 Aligned_cols=255 Identities=16% Similarity=0.161 Sum_probs=206.7
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCe-----EEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
++...++++...+-+|.||.||.+.+.+... .+-+|.++... ..-+...+..|..++..+.|||+.++.++..
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 3456678999999999999999997754433 34556554332 3445677888888899999999999998764
Q ss_pred -eCCeEEEEEeccCCCchhHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEE
Q 001865 740 -TKTHVCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (1002)
Q Consensus 740 -~~~~~~lV~E~~~ggsL~~~l~~------~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL 812 (1002)
+....++++.++.-|+|..++.. .....++..++-.++.|++.|++|||+.||||.||...|++|++.-++||
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 55678999999989999999982 12345778888899999999999999999999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHH
Q 001865 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ell 892 (1002)
+|=.+++..-+. +-....++......||+||.+....|+.++|+||||++||||+
T Consensus 438 tDsaLSRDLFP~-------------------------DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELm 492 (563)
T KOG1024|consen 438 TDSALSRDLFPG-------------------------DYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELM 492 (563)
T ss_pred ccchhccccCcc-------------------------cccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHH
Confidence 999998653221 1122334445677899999999999999999999999999999
Q ss_pred c-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 893 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 893 t-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+ |+.||...++.++..-+..+ ..+-.+..+++++..++..||...|++||++.+
T Consensus 493 tlg~~PyaeIDPfEm~~ylkdG-yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 493 TLGKLPYAEIDPFEMEHYLKDG-YRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred hcCCCCccccCHHHHHHHHhcc-ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 7 99999999998887766654 444555568999999999999999999999443
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=3.1e-26 Score=288.15 Aligned_cols=221 Identities=19% Similarity=0.276 Sum_probs=155.4
Q ss_pred CCC-CCcceeEEEEe-------eCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001865 726 LDH-PFVPALYASFQ-------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (1002)
Q Consensus 726 l~h-pnIv~l~~~~~-------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDL 797 (1002)
+.| +||+.++++|. ....++++|||+ +++|.+++... ...++..+++.++.||+.||+|||++||+||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 344 57777777762 334678899998 77999999753 355999999999999999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCC-------------cccccc-cccccccccCCc
Q 001865 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP-------------VFMAEP-MRASNSFVGTEE 863 (1002)
Q Consensus 798 KP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~~~~~Gt~~ 863 (1002)
||+||||+..|.+|++|||++.............. .+|.... .....+ .......+||+.
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~------DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSR------EIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCccccc------ccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 99999998878888888877654322111100000 0000000 000000 011223578999
Q ss_pred ccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCC
Q 001865 864 YIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 864 Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
|||||++.+..++.++|||||||+||||++|.+||.... ..+..+.....+ +......+...+++.+||+++|.+||
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLP-PQILLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcC-hhhhhcCHHHHHHHHHhCCCChhhCc
Confidence 999999999999999999999999999999988875432 222222222111 11112345667899999999999999
Q ss_pred CChhcHHHHHcCCCcCCC
Q 001865 944 GSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 944 t~~~~a~elL~Hp~f~~~ 961 (1002)
+ +.++|+||||...
T Consensus 258 s----~~eil~h~~~~~~ 271 (793)
T PLN00181 258 S----MSELLQSEFINEP 271 (793)
T ss_pred C----hHHHhhchhhhhh
Confidence 9 9999999999863
No 407
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.93 E-value=1.2e-25 Score=264.79 Aligned_cols=363 Identities=13% Similarity=0.032 Sum_probs=227.2
Q ss_pred HHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCC-cEEEEEEEEecC
Q 001865 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKKD 273 (1002)
Q Consensus 195 le~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~~~~~kd 273 (1002)
+++++|+++++|. +|+|++||.+++.++||+.+|++|+++..+++++........+...+..+. .+..+..+..++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 78 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPS 78 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCC
Confidence 5788999999999 778999999999999999999999999888777665554555555566654 455666666677
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhhhhHHHHHHHhc-CCCCc
Q 001865 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK-KPRSL 352 (1002)
Q Consensus 274 G~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~-~~~~~ 352 (1002)
|..+|+.++..++.+ + .+++++.+|||++++.+.+|......+ +.+.........+...+..... .+..+
T Consensus 79 g~~~~~~~~~~~~~~--~--~~~~~i~rDi~~~~~~~~~l~~~~~~~-----e~~~~~l~~~e~r~~~l~e~~~~~i~~~ 149 (442)
T TIGR02040 79 SFELPMRFILVRLGA--D--RGVLALGRDLRAVAELQQQLVAAQQAM-----ERDYWTLREMETRYRVVLEVSSDAVLLV 149 (442)
T ss_pred CCccCeEEEEEEeCC--C--CeEEEEecccHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 777777777777644 2 256789999999888766552110000 0000011112223333333332 23334
Q ss_pred cc-CCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccccccC
Q 001865 353 SE-STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQST 431 (1002)
Q Consensus 353 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1002)
+. ......+|..+...+||+.+++.|++..+.++.............................+...| .+.+.....
T Consensus 150 d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~- 227 (442)
T TIGR02040 150 DMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGSAAPVRILLRRSQKRL-LVVVSVFRQ- 227 (442)
T ss_pred ECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCCcceEEEEcCCCeEE-EEEEEEEEe-
Confidence 43 345667888899999999999999988877654221100000000000000001111111111111 111111111
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCC
Q 001865 432 DDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS 511 (1002)
Q Consensus 432 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys 511 (1002)
++...++ ....|+++++..++++++ .|+.++++++++|+++|.+|. |+++|++|++++||+
T Consensus 228 ~~~~~~l--------------~~~~dit~~~~~e~~~~~--~~~~l~e~~~d~I~v~D~~G~---I~~~N~a~~~l~G~~ 288 (442)
T TIGR02040 228 DGESLFL--------------CQLSPAGATQPVGDELSE--NLARLYHEAPDAIVFSDADGT---IRGANEAFLELTDSS 288 (442)
T ss_pred CCceEEE--------------EEEcccchhhhhhHHHHH--HHHHHHHhCCceEEEEcCCCc---EEehhHHHHHHhCCC
Confidence 1111111 123456676665555432 499999999999999999888 999999999999997
Q ss_pred -hhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccc
Q 001865 512 -REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (1002)
Q Consensus 512 -~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk 590 (1002)
.++++|+++..++++.... ....+......+.....+..++++||+.+|+++++.|+.+..+ ..++++++|||+||
T Consensus 289 ~~~~l~G~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDITeR~ 365 (442)
T TIGR02040 289 SLEAVRGRTLDRWLGRGGVD-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDISRRL 365 (442)
T ss_pred ChHHHcCCCHHHHhCCCccc-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecchhhc
Confidence 5789999976665543222 1222223333444455677889999999999999999976544 46788999999999
Q ss_pred ccc
Q 001865 591 EPL 593 (1002)
Q Consensus 591 ~~e 593 (1002)
+++
T Consensus 366 ~~~ 368 (442)
T TIGR02040 366 TMR 368 (442)
T ss_pred cCC
Confidence 863
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.93 E-value=8.5e-27 Score=264.29 Aligned_cols=264 Identities=41% Similarity=0.697 Sum_probs=225.8
Q ss_pred cccccCcEEEEEEEE---cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCeEEEEEecc
Q 001865 676 PLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~---~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
.+|.|+||.|++++- ...+..||+|++++......... ....|..++...+ ||++|+++..|+.+...|++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999999875 34477899999988765544444 5567888888886 999999999999999999999999
Q ss_pred CCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCc
Q 001865 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (1002)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (1002)
.||.|+..+... ..+.+..++.+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++....
T Consensus 80 rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~-------- 149 (612)
T KOG0603|consen 80 RGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK-------- 149 (612)
T ss_pred ccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh--------
Confidence 999999888764 4588899999999999999999999999999999999999999999999999865321
Q ss_pred chhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHH
Q 001865 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 911 (1002)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~ 911 (1002)
....|||..|||||++. .+..++|.||||+++++|++|..||.+ ++...|+
T Consensus 150 -----------------------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il 200 (612)
T KOG0603|consen 150 -----------------------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL 200 (612)
T ss_pred -----------------------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence 11228999999999998 567889999999999999999999988 7777888
Q ss_pred hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCC
Q 001865 912 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 981 (1002)
Q Consensus 912 ~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 981 (1002)
+.....|.. .+..+++++..++..+|.+|.... ..+.++++|+||..++|..+....++....|-..+
T Consensus 201 ~~~~~~p~~--l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~ 269 (612)
T KOG0603|consen 201 KAELEMPRE--LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSIT 269 (612)
T ss_pred hhccCCchh--hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccc
Confidence 766666554 678899999999999999999875 57899999999999999999888888777775433
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1e-24 Score=218.68 Aligned_cols=274 Identities=20% Similarity=0.258 Sum_probs=212.5
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCe
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 743 (1002)
.+..+.|+++++||+|+||.+|++....+|..||||+-+... ....+.-|..+.+.|. ...|+.+..++.+..+
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 456789999999999999999999999999999999876542 2235667888888885 4788888888999999
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC---CcEEEEeccCCcc
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCL 820 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~ 820 (1002)
-.+||+++ |.+|.++++-. ...++..+++.++-|++.-++|+|.++.|||||||+|+|+.-+ ..+.|+|||+|+.
T Consensus 86 nvlVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred ceeeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence 99999999 99999998754 3559999999999999999999999999999999999999743 4689999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
+.+.... ...+.+......||..|.+-.++.+...+.+.|+-|+|.+|.++.-|.+||.+
T Consensus 164 y~d~~t~--------------------~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 164 YRDIRTR--------------------QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred hcccccc--------------------ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 5432111 12345566678899999999999999899999999999999999999999988
Q ss_pred C---ChHHHHHHHHhCCCCCCCC---CCCCHHHHHHHHHccccCcCCCCCChhcHHHH-------HcCCCcCCCChhhh
Q 001865 901 K---TRQKTFANILHKDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI-------KKHPFFKGVNWALV 966 (1002)
Q Consensus 901 ~---~~~~~~~~i~~~~~~~~~~---~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el-------L~Hp~f~~~~~~~~ 966 (1002)
. +....+++|.+..+..+.. ...+.++.-.|.-|=...=++-|...- +.++ |+|.+=--.+|.-+
T Consensus 224 lka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~y-lrqlFriLfr~ln~~~d~iyDW~~l 301 (341)
T KOG1163|consen 224 LKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMY-LRQLFRILFRTLNHQYDYIYDWTML 301 (341)
T ss_pred cchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHH-HHHHHHHHHhhccccCCeEeeHHHH
Confidence 5 4455666777766655532 335667777777664443344444211 2333 34444334677766
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=5.9e-24 Score=222.26 Aligned_cols=223 Identities=24% Similarity=0.342 Sum_probs=189.5
Q ss_pred ccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeC
Q 001865 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (1002)
+..+..-.|++.++||+|+||.+|.+.+.-++.+||||.-... ...-++..|....+.| ..+.|+.+|.+..++
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG 96 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG 96 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeecccc
Confidence 3345667999999999999999999999999999999976532 2345677788888887 679999999999999
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-----cEEEEecc
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFD 816 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g-----~vkL~DFG 816 (1002)
-+..||+|++ |.+|.+++.-. +..++..++..++.|++.-++|+|++++|.|||||+|+||..-+ .+-|+|||
T Consensus 97 ~~NiLVidLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 97 KYNILVIDLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred chhhhhhhhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEecc
Confidence 9999999999 99999999866 35699999999999999999999999999999999999997433 48899999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCC
Q 001865 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
+|+.+....... ..+.+...+..||..||+-..+.+...+.+.|+-|||-+++++|-|.+
T Consensus 175 mAK~YrDp~Tkq--------------------HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsL 234 (449)
T KOG1165|consen 175 MAKEYRDPKTKQ--------------------HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL 234 (449)
T ss_pred chhhhcCccccc--------------------cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCC
Confidence 998765432221 345677788899999999999999999999999999999999999999
Q ss_pred CCCC---CChHHHHHHHHh
Q 001865 897 PFRG---KTRQKTFANILH 912 (1002)
Q Consensus 897 Pf~~---~~~~~~~~~i~~ 912 (1002)
||.| .+..+.+++|-.
T Consensus 235 PWQGLKA~tnK~kYeKIGe 253 (449)
T KOG1165|consen 235 PWQGLKADTNKEKYEKIGE 253 (449)
T ss_pred ccccccCcchHHHHHHhcc
Confidence 9987 455566666643
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.9e-23 Score=232.69 Aligned_cols=252 Identities=22% Similarity=0.214 Sum_probs=195.0
Q ss_pred CccccccccccCcEEEEEEEEcCCC-eEEEEEEeecccccChHHHHHHHHHHHHHHhCC----CCCcceeEEEE-eeCCe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----HPFVPALYASF-QTKTH 743 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~-~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~----hpnIv~l~~~~-~~~~~ 743 (1002)
+|++.+.||+|+||.||+|.+..++ ..+|+|+........ ...+..|..++..+. ..++..+++.+ ..+.+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999997774 689999887542111 115677888888886 36999999999 58889
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-----CcEEEEeccCC
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 818 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~-----g~vkL~DFG~a 818 (1002)
.|+||+.+ |.+|.++....+...++..++..++.|++.+|++||+.|++||||||+|+++... ..+.|.|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 9999999877666789999999999999999999999999999999999999865 36999999999
Q ss_pred cc--cCCCCCCCCCcchhhhhcccCCCCCccccccccc-ccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001865 819 CL--TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 819 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
+. +....... ..+.+. ...+.||..|+++.++.+...+.+.|+||+++++.+|+.|.
T Consensus 175 r~~~~~~~~~~~--------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 175 RRFKYVGDSGGN--------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred ccccccCCCCcc--------------------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 73 22111100 000111 23567999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCC--CCC-CCCCCCHHHHHHHHHccccCcCCCCCC
Q 001865 896 TPFRGKTRQKTFANILHKDL--KFP-SSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~--~~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
+||.+.........+..... ... .....+..+..++..+-..+...+|..
T Consensus 235 LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy 287 (322)
T KOG1164|consen 235 LPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDY 287 (322)
T ss_pred CCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCH
Confidence 99977654333333222111 111 122245567777777777888999983
No 412
>PRK13560 hypothetical protein; Provisional
Probab=99.91 E-value=1.7e-23 Score=265.49 Aligned_cols=380 Identities=10% Similarity=0.045 Sum_probs=265.4
Q ss_pred cccccccccccchHHHH-HHHHHhcCCcEEEEeCCCCCCcE--EEechHHHHHcCCChhHHcCCC--CCcccCCCCChHH
Q 001865 175 SDEGGKEKGLPRVSDIV-KDALSTFQQTFVVSDATKPDYPI--MYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPED 249 (1002)
Q Consensus 175 t~~~~~e~~L~~~~~~l-~~ile~~~d~i~i~D~~~~dG~I--~~vN~a~~~l~Gys~eEllG~~--~~~l~~~~~~~~~ 249 (1002)
+.++.++.+|.++++.+ +.+++++|+++++.+..+ +|.+ .+++.++.+++||...++++.. +..+++|++....
T Consensus 53 ~~r~~~~~~l~~~~e~~~r~l~~~~p~~i~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~d~~~~ 131 (807)
T PRK13560 53 DARAIAEAEAQDCREQCERNLKANIPGGMFLFALDG-DGTFSFPSLLDANGELAAIAKHDLMADKGLLAMLIGGDDGDFF 131 (807)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEcC-ccccccceeeccchhHHHhcCcccCCccchhhhhcCCCcchhh
Confidence 34566778888888888 999999999999988632 3443 3488888888998888877543 3345666654433
Q ss_pred H-------HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCch
Q 001865 250 V-------AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPE 322 (1002)
Q Consensus 250 ~-------~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~~~~~l~~ 322 (1002)
. +.+..++..+.....+++.+++||+ |+.....|.++.+|.+ .+.|+++|||++|++|++|+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~dg~--~~~~~~~~~~~~~g~~-~~~g~~~DIT~rk~ae~~l~~~------ 202 (807)
T PRK13560 132 FANPFRSAETIAMALQSDDWQEEEGHFRCGDGR--FIDCCLRFERHAHADD-QVDGFAEDITERKRAEERIDEA------ 202 (807)
T ss_pred hhChhhHHHHHHHHhccCcccceEEEEEeCCcc--EEEEEeeeeecCCCce-EEEEEEEccchHHHHHHHHHHH------
Confidence 3 2333344445556678888999996 7777888999888876 6899999999999999987731
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHhc-CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCC--ccc
Q 001865 323 SLIRYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG--CRT 399 (1002)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~ 399 (1002)
.+....+..... .+...+.....+++|..+...+||+.++++|+...++.|.......... ...
T Consensus 203 -------------~~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~ 269 (807)
T PRK13560 203 -------------LHFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKF 269 (807)
T ss_pred -------------HHHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHh
Confidence 111122222222 2344566677888999999999999999999999888766332211000 000
Q ss_pred ccccccccchhhccccCCccccccccc--ccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhc-ccHHH
Q 001865 400 SMQRISEVPEKKKQKSGRRSFMGLIGR--KSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLAT 476 (1002)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~-~~l~~ 476 (1002)
.......++.....++|+..|+.+..+ ...+.++...... ....|+|+|+..++++++. ..|+.
T Consensus 270 ~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~-------------~~~~DITerk~~e~~L~~se~~l~~ 336 (807)
T PRK13560 270 DADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLV-------------GAITDISGRRAAERELLEKEDMLRA 336 (807)
T ss_pred ccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEE-------------EEEEechHHHHHHHHHHHHHHHHHH
Confidence 011122344455677787775544432 2223333222222 2367999999999999876 66999
Q ss_pred HHHhccccEEEEcCCCCCCCEEec-cHHHHHHcCCChhhhcCCCCccccCCCCChH---------------H--HHHHHH
Q 001865 477 TLERIEKNFVITDPRLPDNPIIFA-SDSFLELTEYSREEILGRNCRFLQGPETDPA---------------T--VRKIRA 538 (1002)
Q Consensus 477 i~e~~~~~I~i~D~~g~~~~Iv~v-N~a~~~l~Gys~eEliG~~~~~l~~~d~~~~---------------~--~~~l~~ 538 (1002)
++++++++|+++|.+|. ++++ |+++++++||+.+|++|+++..+.+...... . ...+..
T Consensus 337 l~~~~~~~i~~~d~~g~---i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (807)
T PRK13560 337 IIEAAPIAAIGLDADGN---ICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAK 413 (807)
T ss_pred HHHhCcccEEEEcCCCC---EEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHH
Confidence 99999999999999888 9987 6788889999999999998654433221110 0 011233
Q ss_pred HHhcCCcEE-EEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 001865 539 AIDNQTDVT-VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 539 ~l~~~~~~~-~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
.+..+..+. .++++.+++|..+|+.....|++|.+|.+++++++++|||++|+++
T Consensus 414 ~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~~~DITerk~~E 469 (807)
T PRK13560 414 TIKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIALLVDITERKQVE 469 (807)
T ss_pred HHhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEEeehhhhHHHHH
Confidence 355555543 4788889999999999999999999999999999999999999853
No 413
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=6e-24 Score=217.57 Aligned_cols=161 Identities=25% Similarity=0.262 Sum_probs=128.4
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcch
Q 001865 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
|+|.+++... ...+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 6899999754 345999999999999999999999998 999999999999999 998854321
Q ss_pred hhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHh
Q 001865 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~ 912 (1002)
....||+.|||||++.+..++.++|||||||++|+|++|+.||...... ..+..+..
T Consensus 62 ----------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 119 (176)
T smart00750 62 ----------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119 (176)
T ss_pred ----------------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH
Confidence 1125899999999999999999999999999999999999999765432 33333333
Q ss_pred CCCCC-C----CCCCCCH--HHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 913 KDLKF-P----SSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 913 ~~~~~-~----~~~~~s~--~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
..... + .....+. .+.+||.+||..+|.+||+ +.++++|+|+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~----~~~ll~~~~~~ 169 (176)
T smart00750 120 GMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA----ANHYLAHCRAL 169 (176)
T ss_pred HhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC----HHHHHHHHHHH
Confidence 22111 0 1111222 5899999999999999999 99999999876
No 414
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.90 E-value=4.8e-24 Score=252.05 Aligned_cols=242 Identities=39% Similarity=0.651 Sum_probs=186.1
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|..++.|..|+||.||.++++.+.+.+|+|+=+.. .+.+ +|+....+|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~---------lilR--nilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN---------LILR--NILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccc---------hhhh--ccccccCCccee----------------
Confidence 5899999999999999999999999999999643221 1111 144444566555
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCC-
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL- 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~- 827 (1002)
|+-..+++.. +.++.. ++.+++|||+-||+|||+||+|++|+.-|++|+.|||++....-....
T Consensus 136 -----gDc~tllk~~--g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -----GDCATLLKNI--GPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -----chhhhhcccC--CCCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 3333334332 234432 378899999999999999999999999999999999998653211110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.+..+.++..+. -....+||||.|+|||++....|+..+|+|++|+|+|+++.|+.||.+++.++.+
T Consensus 201 l~eg~I~k~t~E-------------f~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelf 267 (1205)
T KOG0606|consen 201 LKEGHIEKDTHE-------------FQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 267 (1205)
T ss_pred hhhcchHHHHHH-------------hhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH
Confidence 000000110000 1234579999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC-CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001865 908 ANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 908 ~~i~~~~~~~~~~-~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
..++...+.|++. ....+++++++.++|+.+|..|..- ..+-++.+|+||+.++|.-+
T Consensus 268 g~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt-~ga~evk~h~ff~~LDw~~l 326 (1205)
T KOG0606|consen 268 GQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGT-GGALEVKQHGFFQLLDWKSL 326 (1205)
T ss_pred hhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhccc-chhhhhhhccceeecccchh
Confidence 9999988888865 3467899999999999999999874 36889999999999999955
No 415
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.3e-24 Score=259.58 Aligned_cols=261 Identities=24% Similarity=0.389 Sum_probs=201.6
Q ss_pred cccccccccCcEEEEEEEEcCCCeEEEEEEeec---ccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---GVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~---~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.....+|.|++|.|+.+......+.++.|.++. ...........+..|..+-..+.|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456779999999999888877777677776542 11112222233667888888899999988887777766666669
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||++ +|+.++... ..++...+..+++||+.||+|||+.||.||||||+|++++.+|.+||+|||.+..+....
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~--- 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW--- 474 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc---
Confidence 99988 999999874 358999999999999999999999999999999999999999999999999985542111
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCC-hhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~-~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.........++|+..|+|||++.+..|.+ ..||||.|++++.|++|+.||......+..
T Consensus 475 --------------------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~ 534 (601)
T KOG0590|consen 475 --------------------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS 534 (601)
T ss_pred --------------------chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc
Confidence 11123456789999999999999998877 799999999999999999999765443321
Q ss_pred -HHHHh-CCCC-----CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001865 908 -ANILH-KDLK-----FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 908 -~~i~~-~~~~-----~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
..... .... ......++...+.+|.+||+.||.+|+| +++|++.+||+.+.
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t----i~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT----IEQILNDEWIRSIE 592 (601)
T ss_pred hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec----HHHHhhChHhhhcc
Confidence 11111 1111 1111224556789999999999999999 99999999999863
No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.89 E-value=1.1e-21 Score=218.47 Aligned_cols=262 Identities=36% Similarity=0.555 Sum_probs=207.1
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCC-CcceeEEEEeeCCeEEEEEe
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~~lV~E 749 (1002)
|.+.+.||.|+|+.||++.+. ..+++|.+.............+.+|+.++..+.|+ +++.+++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788899999999999999996 78999999876544434567889999999999988 79999999988888899999
Q ss_pred ccCCCchhHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC-cEEEEeccCCcccCCCCCC
Q 001865 750 YCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~~~~~ 827 (1002)
++.+++|.+++..... ..++...+..++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||.+.........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999977765421 2699999999999999999999999999999999999999988 7999999998643211110
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 903 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~---~~~~~~sDIwSlGvil~elltG~~Pf~~~~~- 903 (1002)
.. ........+||..|++||.+.+ ..+....|+||+|++++++++|..||.....
T Consensus 159 ~~---------------------~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~ 217 (384)
T COG0515 159 SS---------------------IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS 217 (384)
T ss_pred cc---------------------ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 00 0012356789999999999987 5778899999999999999999999887663
Q ss_pred ---HHHHHHHHhCCCC-CCCCCCCC------HHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 904 ---QKTFANILHKDLK-FPSSTPTS------LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 904 ---~~~~~~i~~~~~~-~~~~~~~s------~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
......+...... ........ ..+.+++.+|+..+|..|.+ ......++|...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~ 280 (384)
T COG0515 218 SATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS----SSSDLSHDLLAH 280 (384)
T ss_pred ccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCC----HHHHhhchHhhC
Confidence 3444444443322 22221111 46889999999999999999 666666655554
No 417
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1e-22 Score=228.91 Aligned_cols=177 Identities=21% Similarity=0.189 Sum_probs=132.9
Q ss_pred cccccCCccccccccccCcEEEEEEEEcC-CCeEEEEEEeecccc--cChHHHHHHHHHHHHHHhCCCCCcce-eEEEEe
Q 001865 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPA-LYASFQ 739 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~-l~~~~~ 739 (1002)
.....++|.+.+.||+|+||+||+|.+.. ++..+|||.+..... ........+.+|+++|+.++|+|++. ++++
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 34456899999999999999999999876 678889998753311 12334566889999999999999985 4432
Q ss_pred eCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC-CCCcEEEecCCcEEEEeccCC
Q 001865 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDL-KP~NILl~~~g~vkL~DFG~a 818 (1002)
+..|+|||||+|++|... .. .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|
T Consensus 91 --~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred --CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 457999999999999632 11 11 1467889999999999999999999 999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC
Q 001865 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 872 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~ 872 (1002)
..+...... ... .....-.+..+++.|+|||++..
T Consensus 160 ~~~~~~~~~----------------~~~---~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 160 SVFRRRGAL----------------YRI---AAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred eecccCcch----------------hhh---hhhhhhhhhhccCccCCcccCCh
Confidence 765422100 000 00011135678999999999854
No 418
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.85 E-value=4.1e-20 Score=234.48 Aligned_cols=241 Identities=20% Similarity=0.309 Sum_probs=197.7
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCC----
Q 001865 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ---- 261 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~---- 261 (1002)
.....+..+++.++++++++|. +|+|++||++|++++||+.+|++|+++..+.+++........+......+.
T Consensus 9 ~~~~~~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (799)
T PRK11359 9 AADGIFFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 (799)
T ss_pred hhhhhHHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccc
Confidence 3445678899999999999998 778999999999999999999999998877777665444444444444433
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhhhhHHH
Q 001865 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTE 341 (1002)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 341 (1002)
.+..+++.+++||+.+|+.++..++. .+|. .+++++.+|||++++.+++++.
T Consensus 86 ~~~~e~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT~~~~~~~~~~~-------------------------- 137 (799)
T PRK11359 86 GMSRELQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDASVEMAQKEQTRQ-------------------------- 137 (799)
T ss_pred ccceeeEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeeccchhhhHHHHHH--------------------------
Confidence 24457888999999999999998874 4454 5678999999987766544331
Q ss_pred HHHHhcCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccc
Q 001865 342 LVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFM 421 (1002)
Q Consensus 342 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1002)
T Consensus 138 -------------------------------------------------------------------------------- 137 (799)
T PRK11359 138 -------------------------------------------------------------------------------- 137 (799)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEecc
Q 001865 422 GLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFAS 501 (1002)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN 501 (1002)
+..++++++++++++|.+|. ++++|
T Consensus 138 ----------------------------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N 162 (799)
T PRK11359 138 ----------------------------------------------------LIIAVDHLDRPVIVLDPERR---IVQCN 162 (799)
T ss_pred ----------------------------------------------------HHHHHhcCCCcEEEEcCCCc---EEEEC
Confidence 45678899999999999888 99999
Q ss_pred HHHHHHcCCChhhhcCCCCcccc-CCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEE
Q 001865 502 DSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFI 580 (1002)
Q Consensus 502 ~a~~~l~Gys~eEliG~~~~~l~-~~d~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v 580 (1002)
+++++++||+.++++|++...+. +++........+...+..+..+..+++..+++|..+|+..+..|+.+.+|.+.+++
T Consensus 163 ~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~ 242 (799)
T PRK11359 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 (799)
T ss_pred hhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEE
Confidence 99999999999999999876554 35555556666777777777788899999999999999999999999999999999
Q ss_pred EEEecCCccccc
Q 001865 581 GVQLDGSEHLEP 592 (1002)
Q Consensus 581 gi~~DITerk~~ 592 (1002)
++.+|||++|+.
T Consensus 243 ~~~~DITerk~~ 254 (799)
T PRK11359 243 MTFSDITEERQI 254 (799)
T ss_pred EEeehhhhHHHH
Confidence 999999999874
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=4.2e-22 Score=235.44 Aligned_cols=266 Identities=21% Similarity=0.272 Sum_probs=194.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeeccc-ccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-MLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~-~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.|...+.||++.|=+|.+|++.+ | .+++|++-+.. ...-....+...|++ ...+++||++.+.-+...+...|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 68899999999999999999833 4 49999987643 222333444455555 56679999999988888888899999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
+|+ ..+|+|.+..++. +..-+.+.|+.||+.||..+|..||+|+|||.+||||++-+.+.|+||..-+...-...
T Consensus 101 qyv-khnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD-- 175 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED-- 175 (1431)
T ss_pred HHH-hhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCC--
Confidence 999 8899999987644 88889999999999999999999999999999999999999999999996543221110
Q ss_pred CCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC----------C-CCChhhHHHHHHHHHHHHc-CCC
Q 001865 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----------G-HTSAVDWWALGILLYEMLY-GYT 896 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~----------~-~~~~sDIwSlGvil~ellt-G~~ 896 (1002)
+|..+ ..-.++...-..|+|||.+... + .+++.||||+||++.||++ |++
T Consensus 176 ---------------NPadf---~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 176 ---------------NPADF---TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred ---------------Ccccc---eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 01000 0011222334579999988542 1 4678999999999999996 899
Q ss_pred CCCCCCh-------HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC-------CCcCCCC
Q 001865 897 PFRGKTR-------QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH-------PFFKGVN 962 (1002)
Q Consensus 897 Pf~~~~~-------~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H-------p~f~~~~ 962 (1002)
||.-... .......+++ -.+..+++||..|++.||.+|++ |++.|+- .||-.+-
T Consensus 238 lF~LSQL~aYr~~~~~~~e~~Le~--------Ied~~~Rnlil~Mi~rdPs~RlS----AedyL~~yrG~~FP~yFy~FL 305 (1431)
T KOG1240|consen 238 LFTLSQLLAYRSGNADDPEQLLEK--------IEDVSLRNLILSMIQRDPSKRLS----AEDYLQKYRGLVFPEYFYSFL 305 (1431)
T ss_pred cccHHHHHhHhccCccCHHHHHHh--------CcCccHHHHHHHHHccCchhccC----HHHHHHhhhccccHHHHHHHH
Confidence 9842100 1111111111 01235789999999999999999 8888876 4555566
Q ss_pred hhhhhccCCCC
Q 001865 963 WALVRCMNPPE 973 (1002)
Q Consensus 963 ~~~~~~~~~~~ 973 (1002)
+.-+.++.++.
T Consensus 306 ~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 306 YDYLDRFVPLT 316 (1431)
T ss_pred HHHHHhcCCcc
Confidence 66667777766
No 420
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.85 E-value=4.4e-21 Score=228.83 Aligned_cols=245 Identities=20% Similarity=0.301 Sum_probs=192.3
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001865 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (1002)
.+.|+.++++++++++++|. +|+++++|++|++++||+.++++|++...+.++.........+.+.+..+..+..++
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKL 79 (494)
T ss_pred hHHHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCccccee
Confidence 46789999999999999998 777999999999999999999999987766666666666777778888888888888
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhhhhHHHHHHHhc
Q 001865 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 347 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~ 347 (1002)
..++++|..+|+...+.|+++.+|.+.+++++++|||++|+++++|+..
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~~------------------------------- 128 (494)
T TIGR02938 80 LNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVANQ------------------------------- 128 (494)
T ss_pred eccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHHH-------------------------------
Confidence 8889999999999999999999999999999999999999998776520
Q ss_pred CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccc
Q 001865 348 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 427 (1002)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (1002)
T Consensus 129 -------------------------------------------------------------------------------- 128 (494)
T TIGR02938 129 -------------------------------------------------------------------------------- 128 (494)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHH
Q 001865 428 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLEL 507 (1002)
Q Consensus 428 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l 507 (1002)
+ ..++.++++++++|+++|.+|. ++++|++|+++
T Consensus 129 --------------------------------------~-----~~~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~ 162 (494)
T TIGR02938 129 --------------------------------------K-----LLIESVVDAAPVAFVLLDPTGR---VILDNQEYKKL 162 (494)
T ss_pred --------------------------------------H-----HHHHHHHhcccceEEEEcCCCC---EEEechhHHHh
Confidence 0 0178899999999999999888 99999999999
Q ss_pred cCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEE-EEEEEEecCCc-EEEEEEEEEeeecCCCCE---------
Q 001865 508 TEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVT-VQLINYTKSGK-KFWNLFHLQPMRDQKGEV--------- 576 (1002)
Q Consensus 508 ~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~-~e~~~~~kdG~-~~wv~~~~~pi~d~~G~v--------- 576 (1002)
+|+...+..+..+....+++..... ......+..+. .+......+|. .+|+.....++.+..|.+
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (494)
T TIGR02938 163 ATDLRVKEPAHTVLDLLREAWREAL----AENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQ 238 (494)
T ss_pred hchhhhhHHHHHHHHHhhHHhhhhh----hhcchhhhccccceeeeccCCCceeeEEEecCceEEeecchhhheeccCCC
Confidence 9999888877654444443322221 11111122222 24444555555 789999988887766654
Q ss_pred EEEEEEEecCCccccccccC
Q 001865 577 QYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 577 ~~~vgi~~DITerk~~e~~~ 596 (1002)
.+++++++|||++|++++++
T Consensus 239 ~~~~~~~~DITe~k~~ee~l 258 (494)
T TIGR02938 239 PYLLLTIADISNLREEQERA 258 (494)
T ss_pred chheehHHHHHHHHHHHHHH
Confidence 34567889999999865543
No 421
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=8.3e-21 Score=198.71 Aligned_cols=176 Identities=16% Similarity=0.140 Sum_probs=135.9
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHH------HHHHHHHHHhCCCCCcceeEEEEe
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
+..++|++++.||.|+||.||++.+ ++..+|+|+++............ +.+|+..+.++.|++|..+.+++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 4568999999999999999999766 46689999998664434433333 578999999999999999998866
Q ss_pred eC--------CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEE
Q 001865 740 TK--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 740 ~~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
.. +..++||||++|.+|.++.. +++ ..+.+++.+|..||+.|++|||+||+||+++.+| ++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EE
Confidence 33 35899999999999988732 333 2456999999999999999999999999999988 99
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001865 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||.......+.. ..-++....++.++|+||||+++..+
T Consensus 175 liDfg~~~~~~e~~a---------------------------------------~d~~vler~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 175 IIDLSGKRCTAQRKA---------------------------------------KDRIDLERHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred EEECCCcccccchhh---------------------------------------HHHHHHHhHhcccccccceeEeehHH
Confidence 999998744321100 00023334466789999999999876
Q ss_pred Hc
Q 001865 892 LY 893 (1002)
Q Consensus 892 lt 893 (1002)
..
T Consensus 216 ~~ 217 (232)
T PRK10359 216 KK 217 (232)
T ss_pred HH
Confidence 43
No 422
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=3.6e-20 Score=191.68 Aligned_cols=141 Identities=16% Similarity=0.173 Sum_probs=109.7
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHH-----------------------HHHHHHHHHHHHhCCCCC
Q 001865 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----------------------VHRACAEREILDMLDHPF 730 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~hpn 730 (1002)
...||+|+||.||+|.+. +|+.||+|+++......... .....+|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999996 89999999998653211110 112245899999998887
Q ss_pred cceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCcccCCCCCCcEEEecCCc
Q 001865 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~L-H~~gIiHrDLKP~NILl~~~g~ 809 (1002)
+.....+... . .++||||++|++|....... ..++...+..++.||+.+|.|| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~-~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLK-S-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEec-C-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 7544433222 2 38999999887776553322 4589999999999999999999 799999999999999998 588
Q ss_pred EEEEeccCCcc
Q 001865 810 VSLTDFDLSCL 820 (1002)
Q Consensus 810 vkL~DFG~a~~ 820 (1002)
++|+|||+|..
T Consensus 156 v~LiDFG~a~~ 166 (190)
T cd05147 156 LYIIDVSQSVE 166 (190)
T ss_pred EEEEEcccccc
Confidence 99999999854
No 423
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=1.7e-20 Score=202.02 Aligned_cols=236 Identities=23% Similarity=0.282 Sum_probs=153.1
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC----------CCCcceeEEEEe
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----------HPFVPALYASFQ 739 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~----------hpnIv~l~~~~~ 739 (1002)
.+.....||.|+++.||.|.+..||+.+|+|++..........++.+.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4677888999999999999999999999999997665444556666666654443322 223333334332
Q ss_pred ---------eC---C-----eEEEEEeccCCCchhHHHhh---CCCC--CCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001865 740 ---------TK---T-----HVCLITDYCPGGELFLLLDR---QPTK--VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (1002)
Q Consensus 740 ---------~~---~-----~~~lV~E~~~ggsL~~~l~~---~~~~--~l~~~~i~~i~~qil~aL~~LH~~gIiHrDL 797 (1002)
.. . ..+++|+-+ .++|.+++.. .... .+.......+..|+++.+++||..|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 236788888 8899888652 1111 1222333445589999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC-----
Q 001865 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----- 872 (1002)
Q Consensus 798 KP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~----- 872 (1002)
+|+|++++.+|.++|+||+.....+.. .. ....+..|.+||....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~-----------------------------~~-~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR-----------------------------YR-CSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE-----------------------------EE-GGGS-TTTS-HHHHHHHTSCH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce-----------------------------ee-ccCCCcccCChhhhhhhcccC
Confidence 999999999999999999976432210 00 0124577999998743
Q ss_pred ---CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCC
Q 001865 873 ---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 942 (1002)
Q Consensus 873 ---~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~R 942 (1002)
..++.+.|.|+||+++|.|.+|..||........... .+......+..++.||..||++||.+|
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 2467799999999999999999999986543221110 233333567789999999999999988
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=5.6e-20 Score=187.17 Aligned_cols=245 Identities=19% Similarity=0.298 Sum_probs=202.2
Q ss_pred cccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEE
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
++.....++.+|.+...|..|++++ .|.-++.|++..... .......|..|.-.|+-..||||+.+++.+.....+.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~-t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREV-TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhc-chhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 5567888889999999999999999 556778888764322 2233356667777888889999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCcEEEecCCcEEEE--eccCCccc
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLT--DFDLSCLT 821 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g--IiHrDLKP~NILl~~~g~vkL~--DFG~a~~~ 821 (1002)
++..||+-|+|+.++..+........++..++.+|+.|++|||+.. |..--|....++++++-+++|. |--++...
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 9999999999999999888888899999999999999999999984 4445688889999998877663 33333110
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCC---ChhhHHHHHHHHHHHHcCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT---SAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~---~~sDIwSlGvil~elltG~~Pf 898 (1002)
....-.|.||+||.+...+.+ .++|+|||.+++|||.|...||
T Consensus 344 ----------------------------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf 389 (448)
T KOG0195|consen 344 ----------------------------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF 389 (448)
T ss_pred ----------------------------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence 112347889999999887654 3899999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001865 899 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
..-++.+.-.+|.-..+....++.++...-.|+.-|+..||.+||.+..
T Consensus 390 adlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdm 438 (448)
T KOG0195|consen 390 ADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDM 438 (448)
T ss_pred ccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcce
Confidence 9999988888887777777777788999999999999999999999643
No 425
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=6.2e-19 Score=182.97 Aligned_cols=143 Identities=18% Similarity=0.160 Sum_probs=112.3
Q ss_pred ccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChH-----------------------HHHHHHHHHHHHHhCCCC
Q 001865 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------------------KVHRACAEREILDMLDHP 729 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~-----------------------~~~~~~~E~~il~~l~hp 729 (1002)
+...||+|+||.||+|.+. +|+.||||+++........ ....+..|...+.++.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999986 8999999999875211000 012235788999999999
Q ss_pred CcceeEEEEeeCCeEEEEEeccCCCchhHH-HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecC
Q 001865 730 FVPALYASFQTKTHVCLITDYCPGGELFLL-LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 730 nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~-l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~ 807 (1002)
++.....+.... .|+||||++|+++... +.. ..++...+..++.|++.+|.+||+ +||+||||||+|||++ +
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-C
Confidence 885554443332 4899999988755433 332 347888999999999999999999 9999999999999999 8
Q ss_pred CcEEEEeccCCcccC
Q 001865 808 GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~ 822 (1002)
+.++|+|||++....
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 999999999996543
No 426
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=8.8e-19 Score=179.48 Aligned_cols=203 Identities=20% Similarity=0.191 Sum_probs=141.5
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh-HHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCeEEEEE
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-NKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~-~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+-+...|++|+||+||.+.. .+.+++.+.+........ -....+.+|+++|++|+ |++|++++++ +..|++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 34567899999999998776 677888776654321111 11225788999999995 5889999886 4469999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC-CCCcEEEecCCcEEEEeccCCcccCCCCCC
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDL-KP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+.|.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||+|.........
T Consensus 78 eyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 99999998754321 1 1347789999999999999999999 799999999999999999999643321100
Q ss_pred CCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCC-CCC-ChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHT-SAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~-~~~-~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. ..-. +.+. ... ...-...++.|++|+...-. ..+ ...+.++.|+.+|.++|+..|+.++.
T Consensus 149 ~--r~L~--~rDl---------~~l-lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 149 M--RLLA--REDL---------RHL-LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred H--HHHH--HHHH---------HHH-HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 0000 0000 000 00012367788888764322 223 47899999999999999999987654
No 427
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=4.8e-19 Score=215.17 Aligned_cols=198 Identities=25% Similarity=0.361 Sum_probs=161.7
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCC---CCCcceeEEEEeeC
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTK 741 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~ 741 (1002)
++....|.|-+.||+|+||+||+|.+.. |+.+|||+-+....- .++--.+++.+|+ -+.|..+..++...
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W------EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW------EFYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce------eeeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 4567789999999999999999999966 999999998765432 3333334555555 24555666666677
Q ss_pred CeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-------CCcEEEEe
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTD 814 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-------~g~vkL~D 814 (1002)
+.-++|+||.+.|+|.++++. .+.+++..+..+..||+..|++||..+|||+||||+|+|+.. +-.++|+|
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred CcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence 778999999999999999984 467999999999999999999999999999999999999952 33599999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcC
Q 001865 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG 894 (1002)
||.|..+.--+ +.......++|-.|-++|+..|.++++..|.|.|..+++.||+|
T Consensus 845 fG~siDm~lfp-------------------------~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 845 FGRSIDMKLFP-------------------------DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred cccceeeeEcC-------------------------CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 99986543111 11234567899999999999999999999999999999999999
Q ss_pred CC
Q 001865 895 YT 896 (1002)
Q Consensus 895 ~~ 896 (1002)
++
T Consensus 900 ~y 901 (974)
T KOG1166|consen 900 KY 901 (974)
T ss_pred HH
Confidence 64
No 428
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=6.7e-18 Score=176.47 Aligned_cols=136 Identities=22% Similarity=0.224 Sum_probs=107.4
Q ss_pred cccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-----CCCCcceeEEEEeeCC---e
Q 001865 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-----DHPFVPALYASFQTKT---H 743 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~~---~ 743 (1002)
.-...||+|+||.||. ++.++.. +||++.... ......+.+|+.+++.+ +||||++++++++++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 3456799999999995 7777666 699886542 22346789999999999 6799999999999863 5
Q ss_pred EE-EEEec--cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHcCcccCCCCCCcEEEec----CCcEEEEec
Q 001865 744 VC-LITDY--CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL-EYLHCQGIIYRDLKPENVLLQG----NGHVSLTDF 815 (1002)
Q Consensus 744 ~~-lV~E~--~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL-~~LH~~gIiHrDLKP~NILl~~----~g~vkL~DF 815 (1002)
++ +|||| +.+++|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++. ++.++|+||
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 44 78999 4579999999653 25555 35678888888 9999999999999999999974 337999994
Q ss_pred cCC
Q 001865 816 DLS 818 (1002)
Q Consensus 816 G~a 818 (1002)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 433
No 429
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.6e-17 Score=177.74 Aligned_cols=205 Identities=23% Similarity=0.335 Sum_probs=145.7
Q ss_pred CCCCcceeEEEEee---------------------------CCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHH
Q 001865 727 DHPFVPALYASFQT---------------------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 779 (1002)
Q Consensus 727 ~hpnIv~l~~~~~~---------------------------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~q 779 (1002)
.|||||.++.+|.+ +..+|+||..+ ..+|..|+..+. .+....+.++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999887632 23689999999 889999998753 677888889999
Q ss_pred HHHHHHHHHHcCcccCCCCCCcEEEe--cCC--cEEEEeccCCcccCCCCC-CCCCcchhhhhcccCCCCCccccccccc
Q 001865 780 VVVALEYLHCQGIIYRDLKPENVLLQ--GNG--HVSLTDFDLSCLTSCKPQ-LLLPTTNEKKRRHKGQQNPVFMAEPMRA 854 (1002)
Q Consensus 780 il~aL~~LH~~gIiHrDLKP~NILl~--~~g--~vkL~DFG~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (1002)
+++|+.|||++||.|||||.+|||+. +|+ .+.|.|||++-. ++.. ...+.. ..
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA--d~~hGlqlpy~--------------------S~ 407 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA--DDNHGLQLPYE--------------------SD 407 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee--ccccccccccc--------------------cc
Confidence 99999999999999999999999995 333 589999997632 2211 111110 01
Q ss_pred ccccccCCcccccccccCCCC------CChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHH
Q 001865 855 SNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAK 928 (1002)
Q Consensus 855 ~~~~~Gt~~Y~aPE~l~~~~~------~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~ 928 (1002)
.-..-|...-||||+....+- ..++|.|+.|.+.||++....||++.-....-..-.+..-..+-+..+++.++
T Consensus 408 ~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~r 487 (598)
T KOG4158|consen 408 EVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVAR 487 (598)
T ss_pred cccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHH
Confidence 112347778999999854321 23899999999999999999999873322111111222212223345788999
Q ss_pred HHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 929 QLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 929 ~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+|+..+|+.||++|++.+ ++..+|+-.-+
T Consensus 488 qlV~~lL~r~pskRvsp~-iAANvl~LsLw 516 (598)
T KOG4158|consen 488 QLVFDLLKRDPSKRVSPN-IAANVLNLSLW 516 (598)
T ss_pred HHHHHHhcCCccccCCcc-HHHhHHHHHHh
Confidence 999999999999999954 34455544333
No 430
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=3.1e-18 Score=191.58 Aligned_cols=185 Identities=26% Similarity=0.385 Sum_probs=137.7
Q ss_pred CeEEEEEeccCCCchhHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 742 THVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~-~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.++||.|++|...+|.+++.+ ......+....+.++.|++.|++| +|.+|+|+||.||++..+..+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 468999999999999999974 344557788899999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
....+. ........+...||..||+||.+.+..|+.++||||||++|+||+. +|..
T Consensus 406 ~~~~~~---------------------~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T 461 (516)
T KOG1033|consen 406 QDKDET---------------------VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFST 461 (516)
T ss_pred cccCCc---------------------ccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---Hhcc
Confidence 543321 0111223455689999999999999999999999999999999997 2222
Q ss_pred CCh-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001865 901 KTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 901 ~~~-~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
... ......+-.+.++ |......+.-..|+++||...|.+||+ +.+.--|+|.
T Consensus 462 ~~er~~t~~d~r~g~ip-~~~~~d~p~e~~ll~~lls~~p~~RP~----~~~~~~~~~~ 515 (516)
T KOG1033|consen 462 QFERIATLTDIRDGIIP-PEFLQDYPEEYTLLQQLLSPSPEERPS----AIEVALHEFL 515 (516)
T ss_pred HHHHHHhhhhhhcCCCC-hHHhhcCcHHHHHHHHhcCCCcccCch----HHHHhhhhhc
Confidence 111 1122222223222 222222344568999999999999997 5555555553
No 431
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=4.1e-17 Score=174.70 Aligned_cols=145 Identities=20% Similarity=0.150 Sum_probs=113.8
Q ss_pred CccccccccccCcEEEEEEE-EcCCCeEEEEEEeecccccC-------------------hH--HHHHHHHHHHHHHhCC
Q 001865 670 HFRPIKPLGSGDTGSVHLVE-LCGSGQYFAMKAMDKGVMLN-------------------RN--KVHRACAEREILDMLD 727 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~-~~~~~~~~avK~~~~~~~~~-------------------~~--~~~~~~~E~~il~~l~ 727 (1002)
.|.+.+.||.|+||.||+|. +..+|+.||+|+++...... .. ....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999 66789999999998542110 00 1123567999999997
Q ss_pred CC--CcceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-cccCCCCCCcEEE
Q 001865 728 HP--FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLL 804 (1002)
Q Consensus 728 hp--nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~g-IiHrDLKP~NILl 804 (1002)
+. .+++++++ . ..|+||||++|++|....... ..+....+..++.||+.+|.+||+.| |+||||||+||++
T Consensus 109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe---c-CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 53 34455543 2 348999999888887664332 34666778899999999999999999 9999999999999
Q ss_pred ecCCcEEEEeccCCccc
Q 001865 805 QGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 805 ~~~g~vkL~DFG~a~~~ 821 (1002)
+ ++.++|+|||.+...
T Consensus 183 ~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 183 H-DGKVVIIDVSQSVEL 198 (237)
T ss_pred E-CCCEEEEEChhhhcc
Confidence 9 889999999998543
No 432
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.70 E-value=1.5e-17 Score=197.62 Aligned_cols=298 Identities=33% Similarity=0.536 Sum_probs=229.9
Q ss_pred ccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEE
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..+.+.+.+.+-+|.++.++.+.-..+|-..+.|+..+........+.....+-.++-...+|.++...-.+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 45678888899999999999999888887777777665433333344444455555544566777766666667788999
Q ss_pred EEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCC
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
|++|+.+++|...+...+ ..+.+-.+.++..+..+++|||...+.|+|++|.|++...+|+.++.|||.......-+.
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccC
Confidence 999999999999987653 477778888999999999999999999999999999999999999999995432221110
Q ss_pred CCCC----cchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001865 827 LLLP----TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 827 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
..-. ......+.......+.......+......||+.|.+||.+.+......+|+|++|+++++.++|.+||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0000 000000111122222222334455667899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCC-CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhh
Q 001865 903 RQKTFANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~-~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
...++.+|..+.+.|+.... .+.++++++..+|..+|.+|..++ ++.+...||||+.++|+.+.
T Consensus 1040 pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~-~~~e~k~~~~~~~~~~~~l~ 1104 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK-GAAEVKGHPFFQDVDWENLA 1104 (1205)
T ss_pred hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc-cccccccCCccCCCCccccc
Confidence 99999999999999987643 578899999999999999999943 24588999999999999884
No 433
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=4.3e-16 Score=164.54 Aligned_cols=138 Identities=21% Similarity=0.237 Sum_probs=115.2
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEE
Q 001865 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++.||+|++|.||++.+ .+..+++|+......... .....+.+|+.++..+.|++++....++...+..++||
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36799999999999987 677899998664332221 12245778999999999999887777777778889999
Q ss_pred eccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
||++|++|.+++... .. ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999998653 12 7888999999999999999999999999999999 88999999998854
No 434
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=5.9e-16 Score=161.92 Aligned_cols=133 Identities=18% Similarity=0.213 Sum_probs=107.7
Q ss_pred cccccCcEEEEEEEEcCCCeEEEEEEeecccccC-----hHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEec
Q 001865 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
.||+|+||.||++.. ++..+++|+........ ......+.+|+++++.+.|+++....-++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 389999999999995 67889999865432211 11235677899999999888766555555666777999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
++|++|.+++.... . .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~-----~----~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN-----D----ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH-----H----HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999875421 0 7789999999999999999999999999999 89999999998854
No 435
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=8.1e-16 Score=160.83 Aligned_cols=139 Identities=21% Similarity=0.152 Sum_probs=108.8
Q ss_pred CccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh-------------------HHHHHHHHHHHHHHhCCCC-
Q 001865 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-------------------NKVHRACAEREILDMLDHP- 729 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~hp- 729 (1002)
.|.+.+.||.|+||.||++.+. +|+.+|||++........ ........|+.++..+.++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3888899999999999999884 799999999765321000 0112356788889888777
Q ss_pred -CcceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC
Q 001865 730 -FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 730 -nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g 808 (1002)
.++.+++ ....++||||++|++|..+... .....++.+|+.++.++|+.||+|+||||+||+++.++
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 4445443 2455899999999998765431 34567889999999999999999999999999999999
Q ss_pred cEEEEeccCCccc
Q 001865 809 HVSLTDFDLSCLT 821 (1002)
Q Consensus 809 ~vkL~DFG~a~~~ 821 (1002)
.++|+|||++...
T Consensus 163 ~~~liDfg~~~~~ 175 (198)
T cd05144 163 KIYIIDWPQMVST 175 (198)
T ss_pred cEEEEECCccccC
Confidence 9999999998544
No 436
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=1.9e-17 Score=198.28 Aligned_cols=264 Identities=23% Similarity=0.349 Sum_probs=206.0
Q ss_pred cCCccccccccccCcEEEEEEEEcCC-CeEEEEEEeecccccChHHHHHHHHHHHHHHhCC-CCCcceeEEEEeeCCeEE
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (1002)
...|.+.+.||+|+|+.|-.+....+ ...+|+|.+.... ...........|..+-+.+. |.|++.+++.....+..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 45788999999999999988887443 4467777665432 23334455556777777776 999999999999999999
Q ss_pred EEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCcccCCCCCCcEEEecCC-cEEEEeccCCcccCC
Q 001865 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSC 823 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH-~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~ 823 (1002)
++++|..|++++..+........+......++.|+..++.|+| ..++.|+||||+|.+++.++ .+++.|||+|..+..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999999884222225778888999999999999999 99999999999999999999 999999999966542
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccccccccccc-CCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG-TEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-t~~Y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... ........+| ++.|+|||.+.+. ...+..|+||.|+++.-+++|..|+...
T Consensus 178 ~~g------------------------~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~ 233 (601)
T KOG0590|consen 178 KNG------------------------AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP 233 (601)
T ss_pred cCC------------------------cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence 111 1122334577 9999999999884 5567899999999999999999999765
Q ss_pred ChHHHHH-HHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001865 902 TRQKTFA-NILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 902 ~~~~~~~-~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
....... ..... ......+...+....+++.+++..+|..|.+ ++++..+||+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s----~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 234 SRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLS----IEELKLDNWLSS 291 (601)
T ss_pred ccccccceeecccccccccCccccCChhhhhcccccccCCchhccc----cccccccccccc
Confidence 4433221 11111 1123344456778889999999999999999 999999999998
No 437
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.63 E-value=4.8e-15 Score=136.71 Aligned_cols=104 Identities=26% Similarity=0.564 Sum_probs=96.2
Q ss_pred CCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 001865 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (1002)
Q Consensus 199 ~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 278 (1002)
|+|++++|. +|+|+++|++|++++||+.++++|+++..++++.........+.+.+..+..+..++..++++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999 78899999999999999999999999998888888888889999999999999999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEecchh
Q 001865 279 NLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (1002)
Q Consensus 279 ~~~~~~pi~d~~G~v~~~v~i~~DITe 305 (1002)
+.++++|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 438
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=2.4e-15 Score=180.97 Aligned_cols=139 Identities=21% Similarity=0.226 Sum_probs=111.9
Q ss_pred CCccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc-----ChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCe
Q 001865 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
..|...+.||+|+||.||++.+... .+++|+....... .......+.+|+++++.++|++++....++.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3557789999999999999987443 3444433221111 11234567889999999999999988777777777
Q ss_pred EEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.++||||++|++|.+++. ....++.|++.+|.|||+.||+||||||+|||+ .++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999999875 346788999999999999999999999999999 578999999999965
No 439
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.62 E-value=5.1e-15 Score=136.52 Aligned_cols=104 Identities=28% Similarity=0.460 Sum_probs=96.4
Q ss_pred cccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEE
Q 001865 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (1002)
Q Consensus 482 ~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~w 561 (1002)
|+||+++|.+|. |+++|++|++++||++++++|+++..+.+++......+.+.+.+..+..+..+..+++++|+.+|
T Consensus 1 p~~i~i~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDPDGR---ILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEETTSB---EEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECCcCc---EEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999888 99999999999999999999999999988888888889999999999999999999999999999
Q ss_pred EEEEEEeeecCCCCEEEEEEEEecCCc
Q 001865 562 NLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (1002)
Q Consensus 562 v~~~~~pi~d~~G~v~~~vgi~~DITe 588 (1002)
+++++.|+++++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=5.8e-15 Score=152.75 Aligned_cols=140 Identities=20% Similarity=0.213 Sum_probs=100.3
Q ss_pred ccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHH---------------------HHHHHHHHHhCCCC--
Q 001865 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR---------------------ACAEREILDMLDHP-- 729 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~---------------------~~~E~~il~~l~hp-- 729 (1002)
+.+.||+|+||+||+|.+. +++.||||+++............ ...|...+..+.+.
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999986 78999999987642211111111 13456666666443
Q ss_pred CcceeEEEEeeCCeEEEEEeccCCCchhH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCcEEEecC
Q 001865 730 FVPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 730 nIv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~-~gIiHrDLKP~NILl~~~ 807 (1002)
.+++++++ ...++||||++++.+.. .+.... . ...++.++.+++.++.++|. .||+|+||||+||+++ +
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C
Confidence 34555543 23589999998854432 121110 1 16678899999999999999 9999999999999999 9
Q ss_pred CcEEEEeccCCcccC
Q 001865 808 GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~ 822 (1002)
+.++|+|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 999999999996543
No 441
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.58 E-value=1.1e-14 Score=166.94 Aligned_cols=199 Identities=24% Similarity=0.333 Sum_probs=152.5
Q ss_pred HHhCCCCCcceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc-ccCCCCCCc
Q 001865 723 LDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-IYRDLKPEN 801 (1002)
Q Consensus 723 l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gI-iHrDLKP~N 801 (1002)
|+.+.|.|+.++++.+.++...++|.+||..|+|.+.+... ...++..-...++++|+.||+|||...| .|+.|++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 45689999999999999999999999999999999999763 3458888888999999999999998865 999999999
Q ss_pred EEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCC-------
Q 001865 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------- 874 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~------- 874 (1002)
++++....+||.|||+......... ........-...|.|||.+.+..
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~-------------------------~~~~~~~~~~~lw~aPellr~~~~~~~~~~ 134 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAE-------------------------PEAHHPIRKALLWTAPELLRGALSQSLESA 134 (484)
T ss_pred ceeeeeEEEEechhhhccccccccc-------------------------ccccchhHHHHhccCHHHhccccccccccc
Confidence 9999999999999999865421000 00111122455799999997641
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCCC----ChHHHHHHHHhCCCC--CCC---CCCCCHHHHHHHHHccccCcCCCCCC
Q 001865 875 HTSAVDWWALGILLYEMLYGYTPFRGK----TRQKTFANILHKDLK--FPS---STPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 875 ~~~~sDIwSlGvil~elltG~~Pf~~~----~~~~~~~~i~~~~~~--~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
.+.+.||||+|+++||+++...||... ...+++..+..+... .|. .....+.+..++..||..+|..||++
T Consensus 135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~ 214 (484)
T KOG1023|consen 135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSI 214 (484)
T ss_pred ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccH
Confidence 355799999999999999999999762 223455555441211 111 11234468899999999999999995
Q ss_pred hh
Q 001865 946 HE 947 (1002)
Q Consensus 946 ~~ 947 (1002)
..
T Consensus 215 ~~ 216 (484)
T KOG1023|consen 215 EQ 216 (484)
T ss_pred HH
Confidence 43
No 442
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=2.9e-14 Score=153.09 Aligned_cols=137 Identities=23% Similarity=0.341 Sum_probs=105.0
Q ss_pred cccc-ccCcEEEEEEEEcCCCeEEEEEEeecccc-----c-----ChHHHHHHHHHHHHHHhCCCCCc--ceeEEEEeeC
Q 001865 675 KPLG-SGDTGSVHLVELCGSGQYFAMKAMDKGVM-----L-----NRNKVHRACAEREILDMLDHPFV--PALYASFQTK 741 (1002)
Q Consensus 675 ~~LG-~G~~g~Vy~a~~~~~~~~~avK~~~~~~~-----~-----~~~~~~~~~~E~~il~~l~hpnI--v~l~~~~~~~ 741 (1002)
..|| .||.|+||.+.. .+..++||.+....+ . .......+.+|+.++..|.|++| +.++++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 3466 888889999887 477899998864321 0 11233567889999999988775 6777664432
Q ss_pred -C---eEEEEEeccCC-CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEecc
Q 001865 742 -T---HVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 742 -~---~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
. ..++|||+++| .+|.+++... .++... +.||+.+|.+||++||+|+||||.|||++.++.++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 2 23599999987 6898888652 355543 5689999999999999999999999999999999999999
Q ss_pred CCcc
Q 001865 817 LSCL 820 (1002)
Q Consensus 817 ~a~~ 820 (1002)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8854
No 443
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.53 E-value=6.7e-14 Score=138.33 Aligned_cols=132 Identities=23% Similarity=0.245 Sum_probs=112.1
Q ss_pred ccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCcceeEEEEeeCCeEEEEEec
Q 001865 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
+++.||.|.++.||++.... ..+++|.+..... ...+.+|+.+++.+.+ .++++++.++...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 46789999999999999843 7899999865421 4567889999999976 5899999988888899999999
Q ss_pred cCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---CcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~---gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+.|+.+..+ +......++.+++.+|++||.. +++|+||+|+||++++++.++++|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988777554 4566677889999999999985 799999999999999989999999999854
No 444
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.50 E-value=2.1e-13 Score=127.24 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=99.1
Q ss_pred HHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCC
Q 001865 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDG 274 (1002)
Q Consensus 195 le~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG 274 (1002)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..++++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999 8889999999999999999999999999888887777788888899998887776665544 99
Q ss_pred cEEEEEEEeeeeecCCCCEEEEEEEEecchhhhH
Q 001865 275 TPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 275 ~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~ 308 (1002)
..+|+.+++.|++|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 445
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=1.9e-14 Score=164.64 Aligned_cols=263 Identities=22% Similarity=0.221 Sum_probs=200.4
Q ss_pred cccCCccccccccc--cCcEEEEEEEE--cCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEee
Q 001865 666 INLQHFRPIKPLGS--GDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~--G~~g~Vy~a~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 740 (1002)
.....+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.. ...+.....-.+|..-...+ .|++.++.+..+..
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCccccc
Confidence 34567888899999 99999999998 888999999975433 22223333445565555555 58999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHcCcccCCCCCCcEEEecC-CcEEEEec
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV----ALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDF 815 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~----aL~~LH~~gIiHrDLKP~NILl~~~-g~vkL~DF 815 (1002)
.+..|+-+|+| +.+|..+... ....++...++.+..+... ||.++|+.+|+|-|+||.||++..+ ..++++||
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred CCcceeeeccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence 99999999999 7888888754 3456899999999999999 9999999999999999999999999 88999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001865 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
|+...+....... .........|...|++||.+.+. ++...|||+||.++.+..+|.
T Consensus 268 ~~v~~i~~~~~~~----------------------~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~ 324 (524)
T KOG0601|consen 268 GLVSKISDGNFSS----------------------VFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGS 324 (524)
T ss_pred ceeEEccCCcccc----------------------ceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhc
Confidence 9987665332111 11111233577889999998766 678999999999999988877
Q ss_pred CCCCCC--ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001865 896 TPFRGK--TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 896 ~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.++... +.......+ .++.......+..+...+..|++.+|-.|++ ++.+++|+++..-
T Consensus 325 ~~~~~g~~~~W~~~r~~---~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~----~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 325 HLPSVGKNSSWSQLRQG---YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLT----AQILTALNVIHSK 385 (524)
T ss_pred ccccCCCCCCccccccc---cCchhhhcCcchhhhhHHHHhcCcchhhhhH----HHHHhccccccch
Confidence 766543 322222221 1222222334556667899999999999999 9999999999863
No 446
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.49 E-value=1.7e-13 Score=127.82 Aligned_cols=110 Identities=25% Similarity=0.335 Sum_probs=99.5
Q ss_pred HHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCC
Q 001865 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 557 (1002)
Q Consensus 478 ~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG 557 (1002)
|++++++|+++|.+|+ |+++|+++++++|++.++++|+++..+.++.....+...+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~~~~---i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGR---IVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEETTSB---EEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECCCCE---EEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6889999999999888 9999999999999999999999998888888778888888999888887776666555 99
Q ss_pred cEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 001865 558 KKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 558 ~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~ 591 (1002)
..+|+.+++.|++|.+|++.+++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 447
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.48 E-value=3.4e-13 Score=126.45 Aligned_cols=112 Identities=21% Similarity=0.385 Sum_probs=95.5
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE-EE
Q 001865 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-RL 267 (1002)
Q Consensus 189 ~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~-e~ 267 (1002)
+.|++++++++++++++|. +|+|+++|++|++++||+.++++|+++..+++++........+.+.+..+..... +.
T Consensus 1 e~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEV 77 (113)
T ss_dssp HHHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEE
T ss_pred CHHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEE
Confidence 5789999999999999998 8889999999999999999999999999887776555577778888877776544 34
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecc
Q 001865 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DI 303 (1002)
....++|+.+|+.+..+|+++.+|++.|++++++||
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 78 RFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 344469999999999999999999999999999997
No 448
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.47 E-value=2.9e-14 Score=187.37 Aligned_cols=267 Identities=9% Similarity=-0.004 Sum_probs=195.2
Q ss_pred ccccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCC-CCcccCCCCC
Q 001865 168 VRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTD 246 (1002)
Q Consensus 168 ~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~-~~~l~~~~~~ 246 (1002)
+....|||++++++++++++++.++.+++..+++++.+|. +|+++++|+++++++||+.++..+.. +..+.++++.
T Consensus 389 i~~~~DITerk~~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~ 465 (1092)
T PRK09776 389 IAQIEDINELKRTEQVNERLMERITLANEAGGIGIWEWDL---KPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDR 465 (1092)
T ss_pred hhhHHhhHHHHHHHHHHHHHHHHHHHHHHhcCceEEEEec---CCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHH
Confidence 3445899999999999999999999999999999999999 77799999999999999998844432 2234556666
Q ss_pred hHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhh
Q 001865 247 PEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIR 326 (1002)
Q Consensus 247 ~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~~~~~l~~~l~~ 326 (1002)
......+...+..+..+..+++.+++|| .+|+.....+++|++|.+.+++++.+|||++|+++++|+...++
T Consensus 466 ~~~~~~~~~~~~~~~~~~~e~r~~~~dG-~~w~~~~~~~~~d~~G~~~~~ig~~~DITerk~~e~~L~~~~~~------- 537 (1092)
T PRK09776 466 QRVEKEIRDALQGRSPFKLEFRIVVKDG-VRHIRALANRVLNKDGEVERLLGINMDMTEVRQLNEALFQEKER------- 537 (1092)
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEEcCCc-eEEEEEeeEEEECCCCCEEEEEeeeeehhHHHHHHHHHHHHHHH-------
Confidence 6666777888888888999999999999 99999999999999999999999999999999999888732111
Q ss_pred HHHHHHHHhhhhHHHHHHHh-cCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCC-C-CCcccccc-
Q 001865 327 YDARQKEMATSSVTELVQAM-KKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSY-G-GGCRTSMQ- 402 (1002)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~~~~~- 402 (1002)
...+.... ..+...+......++|..+....|++.+++.|+...+.......... . ........
T Consensus 538 ------------l~~~l~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1092)
T PRK09776 538 ------------LHITLDSIGEAVVCTDMAMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTS 605 (1092)
T ss_pred ------------HHHHHhccccEEEEECCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhc
Confidence 11122222 22344555566778899999999999999999988776543211100 0 00000000
Q ss_pred ---cccccchhhccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhh
Q 001865 403 ---RISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRK 470 (1002)
Q Consensus 403 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 470 (1002)
...........++|...|+.....+..+.++.......+ .+|+|++++.+++++.
T Consensus 606 ~~~~~~~~~~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~-------------~~DITe~k~~e~~L~~ 663 (1092)
T PRK09776 606 RSAAYLEQDVVLHCRSGGSYDVHYSITPLSTLDGENIGSVLV-------------IQDVTESRKMLRQLSY 663 (1092)
T ss_pred CCCccccceEEEEeCCCcEEEEEEEeeeeecCCCCEEEEEEE-------------EEecchHHHHHHHHHh
Confidence 111223334567888888888877777766654433333 5789999998888754
No 449
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.46 E-value=4.3e-13 Score=125.71 Aligned_cols=111 Identities=22% Similarity=0.328 Sum_probs=96.4
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEE-EEE
Q 001865 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV-QLI 551 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~-e~~ 551 (1002)
.|++++++++++++++|.+|. |+++|++++++|||+.++++|+++..++++++.....+.+.+.+..+..... +..
T Consensus 2 ~~~~i~~~~~~~i~~~d~~g~---I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (113)
T PF00989_consen 2 RYRAILENSPDGIFVIDEDGR---ILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVR 78 (113)
T ss_dssp HHHHHHHCSSSEEEEEETTSB---EEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEE
T ss_pred HHHHHHhcCCceEEEEeCcCe---EEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEE
Confidence 389999999999999999888 9999999999999999999999999888887665677788888877766444 555
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecC
Q 001865 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDG 586 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DI 586 (1002)
...++|+.+|+.++..|+++.+|++.+++++++||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 79 FRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 55579999999999999999999999999999998
No 450
>PRK13559 hypothetical protein; Provisional
Probab=99.42 E-value=3.4e-12 Score=146.45 Aligned_cols=122 Identities=44% Similarity=0.808 Sum_probs=109.0
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEE
Q 001865 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~ 551 (1002)
..|+.++++++++|+++|.++.+++|+++|++|++++||+.+|++|+++..+.+++........+...+..+..+..+..
T Consensus 43 ~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 122 (361)
T PRK13559 43 RLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVELL 122 (361)
T ss_pred hHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEEE
Confidence 34888999999999999986656669999999999999999999999988777777666677777888888888888999
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 001865 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
.+++||..+|+..+..|+++.+|.+.+++++++|||++|+.+
T Consensus 123 ~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e 164 (361)
T PRK13559 123 NYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVR 164 (361)
T ss_pred EEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhH
Confidence 999999999999999999999999999999999999999853
No 451
>PRK13557 histidine kinase; Provisional
Probab=99.41 E-value=4.8e-12 Score=153.14 Aligned_cols=133 Identities=37% Similarity=0.735 Sum_probs=121.0
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCC
Q 001865 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (1002)
Q Consensus 182 ~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (1002)
.........|+.+++.++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (540)
T PRK13557 23 DVSDHRSDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERR 102 (540)
T ss_pred hhhhhhhHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCC
Confidence 33456678999999999999999998777899999999999999999999999999988887777777888888898888
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 001865 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~ 314 (1002)
.+..+++.++++|+.+|+.+++.|+++.+|.+++++++.+|||+++++++++.
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~ 155 (540)
T PRK13557 103 EIATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALR 155 (540)
T ss_pred CceEEEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999999999987765
No 452
>PRK13557 histidine kinase; Provisional
Probab=99.40 E-value=2.3e-12 Score=155.90 Aligned_cols=148 Identities=39% Similarity=0.698 Sum_probs=121.4
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEE
Q 001865 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~ 551 (1002)
..|..++++++++|+++|.++.+++|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..+++
T Consensus 30 ~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (540)
T PRK13557 30 DIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEIL 109 (540)
T ss_pred HHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEEE
Confidence 45899999999999999986556669999999999999999999999988888888877778888888888888888998
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccCCchhhHHHHHHHHHHHhhhhhhh
Q 001865 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 619 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~k~~~~~v~~~ 619 (1002)
..+++|+.+|+..++.|+++.+|.+++++++.+|||++++.++..........+...+..+.|.++..
T Consensus 110 ~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~~~~~~~l~~~~~~i~h~l~~p 177 (540)
T PRK13557 110 NYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQKMEALGQLTGGIAHDFNNL 177 (540)
T ss_pred EEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhhH
Confidence 89999999999999999999999999999999999999986544332222233333344444444433
No 453
>PRK13559 hypothetical protein; Provisional
Probab=99.39 E-value=8.9e-12 Score=142.98 Aligned_cols=129 Identities=40% Similarity=0.748 Sum_probs=114.2
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE
Q 001865 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (1002)
.+...|+.++++++++|+++|..+.+|+|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..
T Consensus 40 ~~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (361)
T PRK13559 40 ASGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVV 119 (361)
T ss_pred hhhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEE
Confidence 45667889999999999999986667889999999999999999999999988777666666666777888888888888
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 001865 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~ 314 (1002)
+...+++||..+|+.+++.|+++.+|.+.+++++++|||++|+++++++
T Consensus 120 e~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~~ 168 (361)
T PRK13559 120 ELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALEA 168 (361)
T ss_pred EEEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHHH
Confidence 8888999999999999999999999999999999999999998875543
No 454
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.38 E-value=2.1e-12 Score=163.39 Aligned_cols=142 Identities=13% Similarity=0.120 Sum_probs=128.7
Q ss_pred cccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHH
Q 001865 171 SGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDV 250 (1002)
Q Consensus 171 ~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~ 250 (1002)
..+++++++++.+++++++.++.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+++++......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 3788899999999999999999999999999999998 7889999999999999999999999988887776555556
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001865 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 251 ~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~ 315 (1002)
......+..+..+..+.+..++||..+|+.++..|+++.+|.+.|++++++|||++|+++++++.
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~~ 278 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALEK 278 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHHH
Confidence 66667778888888899989999999999999999999999999999999999999999988763
No 455
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.37 E-value=4.2e-12 Score=160.76 Aligned_cols=135 Identities=14% Similarity=0.101 Sum_probs=119.7
Q ss_pred CCchhhHHHHHhhhhc-ccHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHH
Q 001865 456 PDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR 534 (1002)
Q Consensus 456 ~~~~~~~~~e~~l~~~-~~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~ 534 (1002)
.++.++...++++++. ..++.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.+++.......
T Consensus 138 ~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~~ 214 (779)
T PRK11091 138 NEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGE---FSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVIE 214 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECCCCc---EEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHHH
Confidence 4566777777777655 5689999999999999999888 99999999999999999999999888888776666666
Q ss_pred HHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 001865 535 KIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 535 ~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
.....+..+..+..+.+..++||..+|+.++..|+++.+|.+.+++++++|||++|+.+
T Consensus 215 ~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e 273 (779)
T PRK11091 215 TDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQ 273 (779)
T ss_pred HHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHH
Confidence 67777788888899999999999999999999999999999999999999999999854
No 456
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=1.9e-12 Score=150.83 Aligned_cols=144 Identities=21% Similarity=0.242 Sum_probs=98.3
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChH---------------------------HH----H------HH
Q 001865 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN---------------------------KV----H------RA 716 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~---------------------------~~----~------~~ 716 (1002)
.+.||.|++|+||+|.. .+|+.||||+.++.....-. .. . .+
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 36799999999999997 47899999998765211000 00 0 13
Q ss_pred HHHHHHHHhC-----CCCCcceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHH-HHHHHHHc
Q 001865 717 CAEREILDML-----DHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV-ALEYLHCQ 790 (1002)
Q Consensus 717 ~~E~~il~~l-----~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~-aL~~LH~~ 790 (1002)
.+|...+.++ ++++|.-..-+.......++||||++|++|.++....... .. ...++.+++. .+..+|..
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHHHHHhC
Confidence 3444444444 2343322222223344578999999999998886532111 22 3445666665 47889999
Q ss_pred CcccCCCCCCcEEEecCCcEEEEeccCCcccC
Q 001865 791 GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 791 gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
|++|+|++|.||+++.+|.++|+|||++..+.
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999986654
No 457
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.34 E-value=5.5e-13 Score=156.90 Aligned_cols=186 Identities=17% Similarity=0.207 Sum_probs=110.1
Q ss_pred CchhhhccCCcccCCCCCCCCCCchhHHHhhcccccccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeeccccc
Q 001865 629 TPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML 708 (1002)
Q Consensus 629 ~p~~l~an~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~ 708 (1002)
=|+++...-+++....|+.........+..-+.....-....|.. +.||+|++|+||+|..+.+|+.||||+.++....
T Consensus 80 lP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~ 158 (537)
T PRK04750 80 FPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILP 158 (537)
T ss_pred CCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHH
Confidence 355565555555554443322212222222222111112456777 8999999999999999888999999999865211
Q ss_pred C---------------------------h----HHHHHH------HHHHHHHHhC----CCCCcceeEEEE-eeCCeEEE
Q 001865 709 N---------------------------R----NKVHRA------CAEREILDML----DHPFVPALYASF-QTKTHVCL 746 (1002)
Q Consensus 709 ~---------------------------~----~~~~~~------~~E~~il~~l----~hpnIv~l~~~~-~~~~~~~l 746 (1002)
. . +....+ .+|+..+.++ .+...+.+-.++ +.....++
T Consensus 159 ~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VL 238 (537)
T PRK04750 159 VIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVM 238 (537)
T ss_pred HHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceE
Confidence 0 0 011112 2333333333 233333332333 22456789
Q ss_pred EEeccCCCchhHHH--hhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC----cEEEEeccCC
Q 001865 747 ITDYCPGGELFLLL--DRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLS 818 (1002)
Q Consensus 747 V~E~~~ggsL~~~l--~~~~~--~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g----~vkL~DFG~a 818 (1002)
||||+.|+.|.++. ..... ..+....+..++.| ++..|++|+|+||.||+++.+| .++++|||++
T Consensus 239 vmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-------if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGiv 311 (537)
T PRK04750 239 VMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-------VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIV 311 (537)
T ss_pred EEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-------HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceE
Confidence 99999999998753 22110 02333334444444 4468999999999999999888 9999999998
Q ss_pred cccC
Q 001865 819 CLTS 822 (1002)
Q Consensus 819 ~~~~ 822 (1002)
..++
T Consensus 312 g~l~ 315 (537)
T PRK04750 312 GSLN 315 (537)
T ss_pred EECC
Confidence 6654
No 458
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=3.9e-12 Score=134.20 Aligned_cols=211 Identities=22% Similarity=0.262 Sum_probs=147.2
Q ss_pred HHHhCCCCCcceeEEEEeeC-----CeEEEEEeccCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc--Cc
Q 001865 722 ILDMLDHPFVPALYASFQTK-----THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ--GI 792 (1002)
Q Consensus 722 il~~l~hpnIv~l~~~~~~~-----~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~~LH~~--gI 792 (1002)
-|-++.|.|+|+++.|+.+. ..+.+++|||..|+|..+|++. -.+.+.....+.++-||+.||.|||+. -|
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 34456799999999998654 4588999999999999999852 235688999999999999999999998 59
Q ss_pred ccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccC
Q 001865 793 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 872 (1002)
Q Consensus 793 iHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~ 872 (1002)
+|+++..+-|++..+|-+|+.--.-... .+... .+. -.......|-++|.+||.=..
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~---h~s~~--~~~------------------~~Ek~~~~~~~g~~a~~sg~~ 256 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDST---HPSVN--STR------------------EAEKSVNTSLPGFSAPESGTT 256 (458)
T ss_pred ccCCcchhheeecCCceEEecccCcccc---chhhh--hhh------------------HhhhhccccCCccccCCcCcc
Confidence 9999999999999998888753322110 00000 000 001122346788999997555
Q ss_pred CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001865 873 AGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 873 ~~~~~~sDIwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
...+.++|||+||....+|..|..--..... .+.-..+..-.+.+.. .--.+++++||...|..||+ +++
T Consensus 257 tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len-----~lqr~~i~kcl~~eP~~rp~----ar~ 327 (458)
T KOG1266|consen 257 TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLEN-----GLQRGSITKCLEGEPNGRPD----ARL 327 (458)
T ss_pred cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccC-----ccccCcCcccccCCCCCCcc----hhh
Confidence 5566789999999999999987764322211 1111112111111111 11246899999999999999 999
Q ss_pred HHcCCCcCCCChh
Q 001865 952 IKKHPFFKGVNWA 964 (1002)
Q Consensus 952 lL~Hp~f~~~~~~ 964 (1002)
+|.||-+-.+.-.
T Consensus 328 llfHpllfeVhsl 340 (458)
T KOG1266|consen 328 LLFHPLLFEVHSL 340 (458)
T ss_pred hhcCceeeecchH
Confidence 9999998776443
No 459
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.26 E-value=7.1e-11 Score=146.87 Aligned_cols=128 Identities=39% Similarity=0.741 Sum_probs=115.1
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001865 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (1002)
..+++.+++.+++++++.|..+.+|+|+|+|+++++++||+.++++|+++..+.++.........+...+..+..+..++
T Consensus 147 ~r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~ 226 (665)
T PRK13558 147 RRLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVEL 226 (665)
T ss_pred hHHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEE
Confidence 34567899999999999986666889999999999999999999999998877777766666677888888888889999
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001865 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~ 315 (1002)
+.+++||..+|+.++..|+.+.+|.+.+++++++|||++|++|++++.
T Consensus 227 ~~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~ 274 (665)
T PRK13558 227 RNYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQR 274 (665)
T ss_pred EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998874
No 460
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=4.8e-12 Score=145.23 Aligned_cols=253 Identities=21% Similarity=0.265 Sum_probs=186.2
Q ss_pred ccccCCccccccccccCcEEEEEEEEc-CCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEEEeeCC
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
.....+|..+..||.|.|+.|+.+.-. .++..|++|.+.........+... ..|.-+...+ .|.+++..+..+....
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~s-l~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFS-LGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcc-hhhhhHhhHhhcccccCCCCCCccccc
Confidence 345689999999999999999998755 678899999988775544444433 3344444444 6899999888888888
Q ss_pred eEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecC-CcEEEEeccCCccc
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~ 821 (1002)
..|+-.|||+++++...... ...+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||....+
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred cccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccc
Confidence 88899999999988766532 2347888899999999999999999999999999999999976 78899999987432
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccc--ccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI--APEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~--aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
.... ....+...++ ++..+....+..+.|++|||..+++.++|.+.-.
T Consensus 418 ~~~~------------------------------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~ 467 (524)
T KOG0601|consen 418 AFSS------------------------------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE 467 (524)
T ss_pred ceec------------------------------ccccccccccccchhhccccccccccccccccccccccccCcccCc
Confidence 2111 1112333444 4444555677889999999999999999875433
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001865 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
.... ...+..+. .+........+..+.+.++..++..|+. +.++..|.-|.
T Consensus 468 ~~~~---~~~i~~~~--~p~~~~~~~~~q~~~kv~~~~~~~~~~l----~~~l~~~~~~~ 518 (524)
T KOG0601|consen 468 SGVQ---SLTIRSGD--TPNLPGLKLQLQVLLKVMINPDRKRRPS----AVELSLHSEFY 518 (524)
T ss_pred cccc---ceeeeccc--ccCCCchHHhhhhhhhhhcCCccccchh----hhhhcccchhh
Confidence 2221 22222332 2222333467888999999999999998 77777776554
No 461
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.25 E-value=2.7e-11 Score=123.00 Aligned_cols=127 Identities=24% Similarity=0.291 Sum_probs=95.8
Q ss_pred cccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCC-cceeEEEEeeCCeEEEEEeccC
Q 001865 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
++.|+.|.++.||++.. .+..|++|+...... ....+..|+.+++.+.+.+ +++++.+... ..++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecC
Confidence 46789999999999997 478899998765421 1224567888888885444 4566654432 3479999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc-----ccCCCCCCcEEEecCCcEEEEeccCCc
Q 001865 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-----IYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gI-----iHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
|.++.... . ....++.+++.+|+.||..++ +|+|++|+||+++ ++.++++|||.+.
T Consensus 75 G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98876430 1 113456799999999999985 9999999999999 7789999999884
No 462
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.23 E-value=1.4e-10 Score=119.33 Aligned_cols=140 Identities=15% Similarity=0.127 Sum_probs=101.7
Q ss_pred cccccccCcEEEEEEEEcC------CCeEEEEEEeecccc--c--------C---------hHHHHHHH----HHHHHHH
Q 001865 674 IKPLGSGDTGSVHLVELCG------SGQYFAMKAMDKGVM--L--------N---------RNKVHRAC----AEREILD 724 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~------~~~~~avK~~~~~~~--~--------~---------~~~~~~~~----~E~~il~ 724 (1002)
...||.|.=+.||.|.... .+..+|||+.+.... . + .+....+. +|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999999998643 357899998874211 0 0 11122333 7888898
Q ss_pred hCCC--CCcceeEEEEeeCCeEEEEEeccCCCchhH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCcccCCCCCC
Q 001865 725 MLDH--PFVPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPE 800 (1002)
Q Consensus 725 ~l~h--pnIv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~i~~i~~qil~aL~~L-H~~gIiHrDLKP~ 800 (1002)
++.. -+++.++++ ..-++||||+.++.+.. .+.. ..++...+..++.+++.+|..| |+.||||+||+|.
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 8843 567777764 44589999996554422 2222 2355667778889999999999 8999999999999
Q ss_pred cEEEecCCcEEEEeccCCccc
Q 001865 801 NVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 801 NILl~~~g~vkL~DFG~a~~~ 821 (1002)
|||+. ++.+.|+|||.|-..
T Consensus 155 NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HEEEE-CCcEEEEECCCceeC
Confidence 99997 578999999988543
No 463
>PRK10060 RNase II stability modulator; Provisional
Probab=99.22 E-value=1e-10 Score=144.59 Aligned_cols=153 Identities=14% Similarity=0.151 Sum_probs=117.1
Q ss_pred ccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCccc-CCCCChHHHHH
Q 001865 174 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQ-GAGTDPEDVAK 252 (1002)
Q Consensus 174 it~~~~~e~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~-~~~~~~~~~~~ 252 (1002)
+++.....+.+.....+++.+++.++++|+++|. +|+|+++|++|++++||+.+|++|+++..++ ++.........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~ 172 (663)
T PRK10060 96 WHDTPSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHH
Confidence 3333444445666777889999999999999999 7789999999999999999999999976444 44444455566
Q ss_pred HHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCC-CEEEEEEEEecchhhhHHHHHhhcC-----CCCCchhhhh
Q 001865 253 IRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG-KVLKFIGMQVEVSKHTEGAKDKMLR-----PNGLPESLIR 326 (1002)
Q Consensus 253 i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G-~v~~~v~i~~DITerk~~e~~L~~~-----~~~l~~~l~~ 326 (1002)
++..+..+..|.++.+..+++|..+|+.....+ .+..| ...+++++.+|||++|+++++++.. ++.|++|-..
T Consensus 173 ~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~~-~~~~g~~~~~~i~~~~DITe~k~~e~~l~~~a~~D~LTGL~NR~~f 251 (663)
T PRK10060 173 IRGFFRSGNAYEVERWIKTRKGQRLFLFRNKFV-HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAI 251 (663)
T ss_pred HHHHHhcCCceEEEEEEEeCCCCEEEEEeeeEE-EcCCCCceEEEEEEEEechHHHHHHHHHHHHhhcCccCCCcCHHHH
Confidence 777788888899999999999999998766544 44444 4567889999999999999887653 5556665444
Q ss_pred HHHH
Q 001865 327 YDAR 330 (1002)
Q Consensus 327 ~~~~ 330 (1002)
.+..
T Consensus 252 ~~~l 255 (663)
T PRK10060 252 QELI 255 (663)
T ss_pred HHHH
Confidence 4333
No 464
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.22 E-value=1.9e-10 Score=133.13 Aligned_cols=226 Identities=18% Similarity=0.177 Sum_probs=152.1
Q ss_pred EEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCC
Q 001865 687 LVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTK 766 (1002)
Q Consensus 687 ~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~ 766 (1002)
.+..+.++.++.+.+++... ........+-++-|+.++||||+++++.++..+.+|+|+|.+ ..|..+++.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~---- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE---- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH----
Confidence 34556678888888887542 244556677788899999999999999999999999999999 456667765
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH-HcCcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCC
Q 001865 767 VLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 845 (1002)
Q Consensus 767 ~l~~~~i~~i~~qil~aL~~LH-~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (1002)
+....+..-+.||+.||.||| +.+++|++|.-+-|+|+..|.-||++|.++.....-..
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~------------------- 160 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA------------------- 160 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------------------
Confidence 346667777899999999998 56899999999999999999999999998744221100
Q ss_pred cccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCH
Q 001865 846 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSL 925 (1002)
Q Consensus 846 ~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~ 925 (1002)
......---.|..|+.+.... ...|.|-|||++++++.|..+ ...... .. ..++.
T Consensus 161 --------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~~--~~~~~~-----------~~--~~ipk 215 (690)
T KOG1243|consen 161 --------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSLL--TKTDLS-----------NT--GKIPK 215 (690)
T ss_pred --------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcccC--cchhhh-----------cc--Cccch
Confidence 000111122356666543332 357999999999999999332 211110 00 01122
Q ss_pred HHHHHHHHccccCcCCCCCChhcHHHHHc-CCCcCCCChhhh
Q 001865 926 HAKQLMYRLLHRDPKSRLGSHEGANEIKK-HPFFKGVNWALV 966 (1002)
Q Consensus 926 ~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~-Hp~f~~~~~~~~ 966 (1002)
....+..+-+.-.+..||.....+..++. |+||+..-...+
T Consensus 216 ~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~~ 257 (690)
T KOG1243|consen 216 ALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVDTL 257 (690)
T ss_pred hHHHHHHHHhccccccccchhhHHHHHHhccccccchHHHHH
Confidence 33344444455566666663334555554 899887544433
No 465
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.19 E-value=1.7e-10 Score=113.43 Aligned_cols=146 Identities=19% Similarity=0.201 Sum_probs=109.3
Q ss_pred ccccccccCcEEEEEEEEcCCCeEEEEEEee-----cccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEE
Q 001865 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMD-----KGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~-----~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+..|.+|+-+.|+++.+ .|+.++||.-. -..+...-...+..+|+.+|.++.--.|.-..=+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567789999999999998 78888888532 22233334456778899999887544444333345555666899
Q ss_pred EeccCC-CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCC---cEEEEeccCCcc
Q 001865 748 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 820 (1002)
Q Consensus 748 ~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g---~vkL~DFG~a~~ 820 (1002)
|||++| .++.+++...-...........++.+|-..+.-||.++|||+||..+||++.++| .+.|+|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999966 4888888764333344445578899999999999999999999999999998766 358999999843
No 466
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.18 E-value=2.9e-10 Score=141.45 Aligned_cols=121 Identities=40% Similarity=0.759 Sum_probs=108.0
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEEE
Q 001865 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.+++.+++++++.|..+.++.|+|+|+++++++||+.++++|+++..+.+++........+...+..+..+..+++.+
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 229 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELRNY 229 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 57799999999999986544555999999999999999999999998888877777667777788888888889999999
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccc
Q 001865 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
++||..+|+..+..|+++..|.+.+++++++|||++|+.++
T Consensus 230 ~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~ 270 (665)
T PRK13558 230 RKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAEL 270 (665)
T ss_pred CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHH
Confidence 99999999999999999999999999999999999999543
No 467
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.17 E-value=9.6e-11 Score=138.33 Aligned_cols=132 Identities=17% Similarity=0.105 Sum_probs=98.9
Q ss_pred ccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCC-hhHHcCCCCCcccCCCCChH
Q 001865 170 SSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYT-SKEVVGRNCRFLQGAGTDPE 248 (1002)
Q Consensus 170 ~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys-~eEllG~~~~~l~~~~~~~~ 248 (1002)
...||+.++..+.++ .+.|+.++++++++|+++|. +|+|+++|++|++++||+ .++++|+++..+.++... .
T Consensus 236 ~~~dit~~~~~e~~~---~~~~~~l~e~~~d~I~v~D~---~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~~-~ 308 (442)
T TIGR02040 236 QLSPAGATQPVGDEL---SENLARLYHEAPDAIVFSDA---DGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGGV-D 308 (442)
T ss_pred EEcccchhhhhhHHH---HHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCcc-c
Confidence 346777776655433 24799999999999999998 788999999999999997 578999998755443222 1
Q ss_pred HHHHHHHHH-HcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHH
Q 001865 249 DVAKIRETL-QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (1002)
Q Consensus 249 ~~~~i~~~l-~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~ 311 (1002)
...+...+ ..|.....+....++||+.+|++++++|+.+.++ ..++++++|||+|++.+.
T Consensus 309 -~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDITeR~~~~~ 369 (442)
T TIGR02040 309 -LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDISRRLTMRD 369 (442)
T ss_pred -HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecchhhccCCC
Confidence 22223333 3444444566778999999999999999976544 467889999999988753
No 468
>PRK10060 RNase II stability modulator; Provisional
Probab=99.13 E-value=6.2e-10 Score=137.64 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=95.6
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCcccc-CCCCChHHHHHHHHHHhcCCcEEEEEEE
Q 001865 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN 552 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~-~~d~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (1002)
++.+++.++++|+++|.+|. |+++|++|++++||+.+|++|+++..+. ++++.......+...+..+..+..|.+.
T Consensus 113 ~~~v~~~~~~gI~i~D~~g~---I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 113 AEQVVSEANSVIVILDSRGN---IQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHhhCCceEEEEeCCCC---EEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 67899999999999999888 9999999999999999999999975544 5555555666777778888889999999
Q ss_pred EecCCcEEEEEEEEEeeecCCCC-EEEEEEEEecCCccccc
Q 001865 553 YTKSGKKFWNLFHLQPMRDQKGE-VQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~-v~~~vgi~~DITerk~~ 592 (1002)
++++|..+|+.... ++.+..|. ..+++++.+|||++|+.
T Consensus 190 ~~~~G~~~~~~~~~-~~~~~~g~~~~~~i~~~~DITe~k~~ 229 (663)
T PRK10060 190 KTRKGQRLFLFRNK-FVHSGSGKNEIFLICSGTDITEERRA 229 (663)
T ss_pred EeCCCCEEEEEeee-EEEcCCCCceEEEEEEEEechHHHHH
Confidence 99999999987654 44444554 46788999999999984
No 469
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=9e-10 Score=109.26 Aligned_cols=134 Identities=21% Similarity=0.205 Sum_probs=99.5
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccCh-----HHHHHHHHHHHHHHhCCCCCcceeEEEEeeCCeEEEEEe
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
..+++|+-+.+|.+.+ -|..+++|.=.+...-.+ -...+-.+|..++.++.--.|...+=++.+.+...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4578999999999976 455577775443322222 223455678999988865444444444555566779999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcc
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
|++|..|.+++... ...++..+-.-+.-||.+||||+||.++||++..+ .+.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RIYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cEEEEECCcccc
Confidence 99999999998763 14567778888999999999999999999999854 499999999853
No 470
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.12 E-value=9.2e-10 Score=100.10 Aligned_cols=120 Identities=20% Similarity=0.408 Sum_probs=96.9
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCC-cEEEEE
Q 001865 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRL 267 (1002)
Q Consensus 189 ~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~ 267 (1002)
+.++.+++.++++++++|. +|+|+++|+++++++|++.++++|+.+..+.++.........+...+..+. ....+.
T Consensus 3 ~~~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (124)
T TIGR00229 3 ERYRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEER 79 (124)
T ss_pred hHHHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEe
Confidence 5678899999999999998 777999999999999999999999988776666555444455555555332 233445
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHH
Q 001865 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~ 312 (1002)
....++|..+|+.....|+. .+|...++++++.|||++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 80 RVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred eeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 55588999999999999998 788899999999999999988765
No 471
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.11 E-value=1.8e-10 Score=137.51 Aligned_cols=116 Identities=26% Similarity=0.450 Sum_probs=105.8
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEEE
Q 001865 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
|+.++++++++++++|.+|+ ++++|+++++++||++++++|++...+.++.........+.+.+..+..+..+...+
T Consensus 6 ~~~i~~~~~~~i~~~d~~g~---~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 6 YRQTVDQAPLAISITDLKAN---ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred HHHHHHhCCceEEEECCCCc---EEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 89999999999999999888 999999999999999999999987777766666667777778888888888888889
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 001865 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~ 592 (1002)
+++|+.+|+..+..|+++.+|.+.+++++++|||++|++
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~ 121 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRL 121 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHH
Confidence 999999999999999999999999999999999999984
No 472
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.09 E-value=5.1e-10 Score=100.92 Aligned_cols=86 Identities=29% Similarity=0.408 Sum_probs=74.6
Q ss_pred EEeccHHHHHHcCCChhhhcCCC----CccccCCCCChHHHHHHHH-HHhcCCcEEEEEEEEecCCcEEEEEEEEEeeec
Q 001865 497 IIFASDSFLELTEYSREEILGRN----CRFLQGPETDPATVRKIRA-AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRD 571 (1002)
Q Consensus 497 Iv~vN~a~~~l~Gys~eEliG~~----~~~l~~~d~~~~~~~~l~~-~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d 571 (1002)
|+|||+++++|+||+++++ +.. +..++||++...+.+.+.. .+..+..+..+++++++||+.+|++.++.+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 7778999999999999999 778888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 001865 572 QKGEVQYFIGVQ 583 (1002)
Q Consensus 572 ~~G~v~~~vgi~ 583 (1002)
++|+++.++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999974
No 473
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.05 E-value=1.1e-09 Score=139.31 Aligned_cols=141 Identities=14% Similarity=0.183 Sum_probs=117.0
Q ss_pred cccccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCccc-CCCC
Q 001865 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQ-GAGT 245 (1002)
Q Consensus 167 ~~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~-~~~~ 245 (1002)
.+....|||++++.++ ..+.+..++++++++++++|. +|+|+++|+++++++||+.++++|+.+..+. ++..
T Consensus 118 ~~~~~~DiT~~~~~~~----~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~~ 190 (799)
T PRK11359 118 YLALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDP---ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 (799)
T ss_pred EEEEEeeccchhhhHH----HHHHHHHHHhcCCCcEEEEcC---CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCCC
Confidence 4455689987665543 456677889999999999998 7789999999999999999999999977554 3444
Q ss_pred ChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 001865 246 DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 246 ~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~ 314 (1002)
.......+...+..+..+..+++..+++|..+|+.++..|+.+.+|.+.+++++++|||++|++++..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~~ 259 (799)
T PRK11359 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 (799)
T ss_pred cHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHHH
Confidence 555556667777777778888888999999999999999999999999999999999999998875543
No 474
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.03 E-value=2.3e-09 Score=97.47 Aligned_cols=115 Identities=22% Similarity=0.351 Sum_probs=95.7
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcC-CcEEEEEEE
Q 001865 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLIN 552 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~-~~~~~e~~~ 552 (1002)
++.++++++++++++|.+|. ++++|+++++++|++.++++|+.+..+.++.........+...+..+ .....+..+
T Consensus 5 ~~~~~~~~~~~~~~~d~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDLEGN---ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRV 81 (124)
T ss_pred HHHHHhhCCceEEEEcCCCc---EEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeee
Confidence 78899999999999999888 99999999999999999999999777777666655555565655533 234455556
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 001865 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~ 592 (1002)
..++|..+|+.....|+. .+|...+++++++|||++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~ 120 (124)
T TIGR00229 82 RRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQA 120 (124)
T ss_pred EcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHH
Confidence 689999999999999998 788899999999999999874
No 475
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.98 E-value=2.8e-09 Score=113.09 Aligned_cols=140 Identities=24% Similarity=0.320 Sum_probs=107.7
Q ss_pred ccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCC--CCcceeEEEEeeC---CeEEEEEe
Q 001865 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTK---THVCLITD 749 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~---~~~~lV~E 749 (1002)
+.|+.|.++.||++.... |+.|++|+....... .....+..|..+++.+.+ .++++++.+.... +..|+|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998743 678999997654211 134567889999999965 4467777776653 36789999
Q ss_pred ccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 001865 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------------- 789 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~---------------------------------------- 789 (1002)
|++|.+|.+.+.. ..++......++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999988776532 236777777888888888888884
Q ss_pred ----------------cCcccCCCCCCcEEEec--CCcEEEEeccCCcc
Q 001865 790 ----------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 820 (1002)
Q Consensus 790 ----------------~gIiHrDLKP~NILl~~--~g~vkL~DFG~a~~ 820 (1002)
..++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 56789999998843
No 476
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=98.95 E-value=4.1e-09 Score=94.96 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=73.2
Q ss_pred EEEechHHHHHcCCChhHHcCCC----CCcccCCCCChHHHHHHHH-HHHcCCcEEEEEEEEecCCcEEEEEEEeeeeec
Q 001865 214 IMYASAGFFKMTGYTSKEVVGRN----CRFLQGAGTDPEDVAKIRE-TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKD 288 (1002)
Q Consensus 214 I~~vN~a~~~l~Gys~eEllG~~----~~~l~~~~~~~~~~~~i~~-~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d 288 (1002)
|+|||+.+++++||+++++ |.. +..+++|++.......+.. .+..+..+..+++.+++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 6677888888888888888 778888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 001865 289 DEGKVLKFIGMQ 300 (1002)
Q Consensus 289 ~~G~v~~~v~i~ 300 (1002)
++|++++++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999874
No 477
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.92 E-value=3.9e-08 Score=110.60 Aligned_cols=204 Identities=18% Similarity=0.234 Sum_probs=141.7
Q ss_pred cEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhCCCCCcceeEEEEe----eCCeEEEEEeccCC-Cch
Q 001865 682 TGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHVCLITDYCPG-GEL 756 (1002)
Q Consensus 682 ~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~~~lV~E~~~g-gsL 756 (1002)
..+.|+|....+|..|++|.++........ ....-.++++++.|+|||++.++|. .+..+++|++|+++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 358899999999999999998543222222 2233467899999999999999987 34578999999975 577
Q ss_pred hHHHhhC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCcccCC
Q 001865 757 FLLLDRQ-------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 757 ~~~l~~~-------------~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.++.-.. .+...++..+|.|+.||..||.++|+.|+..+-|.|.+|+++.+.+++|.-.|.......
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 6654321 123578899999999999999999999999999999999999888888887776533221
Q ss_pred CCCCCCCcchhhhhcccCCCCCcccccccccccccccCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC-CCCCC
Q 001865 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP-FRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P-f~~~~ 902 (1002)
++ . +-+.+ -.+-|.=.||.+++.|.+|..- +....
T Consensus 446 d~---------------------------------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~ 481 (655)
T KOG3741|consen 446 DP---------------------------------------T--EPLES---QQQNDLRDLGLLLLALATGTENSNRTDS 481 (655)
T ss_pred CC---------------------------------------C--cchhH---HhhhhHHHHHHHHHHHhhcccccccccc
Confidence 11 0 11111 1367899999999999999654 11122
Q ss_pred hHHH-HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCC
Q 001865 903 RQKT-FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 903 ~~~~-~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
..+. +..|.. ..+.++.++|.-+...++++
T Consensus 482 ~~~s~~~~I~~---------~yS~D~rn~v~yl~s~~~~~ 512 (655)
T KOG3741|consen 482 TQSSHLTRITT---------TYSTDLRNVVEYLESLNFRE 512 (655)
T ss_pred hHHHHHHHhhh---------hhhHHHHHHHHHHHhcCccc
Confidence 2222 111111 13555666666666666653
No 478
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.89 E-value=3.7e-08 Score=107.14 Aligned_cols=134 Identities=19% Similarity=0.063 Sum_probs=94.2
Q ss_pred EEEEEEEcCCCeEEEEEEeeccccc----C----hHHHHHHHHHHHHHHhCCCCC--cceeEEEEee-----CCeEEEEE
Q 001865 684 SVHLVELCGSGQYFAMKAMDKGVML----N----RNKVHRACAEREILDMLDHPF--VPALYASFQT-----KTHVCLIT 748 (1002)
Q Consensus 684 ~Vy~a~~~~~~~~~avK~~~~~~~~----~----~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~-----~~~~~lV~ 748 (1002)
.|+++.. .|+.|.||........ . ........+|...+..|..-+ ++.+..++.. ...-++||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3556655 6778999976432210 0 011113667888777773322 3344445532 23578999
Q ss_pred eccCCC-chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEec-------CCcEEEEeccCCc
Q 001865 749 DYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDFDLSC 819 (1002)
Q Consensus 749 E~~~gg-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~-------~g~vkL~DFG~a~ 819 (1002)
|++++. +|.+++........+......++.+++..+..||.+||+|+||+++|||++. ++.+.|+||+.+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999875 8999986432334567788899999999999999999999999999999985 4679999999874
No 479
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.87 E-value=2.4e-08 Score=113.78 Aligned_cols=221 Identities=17% Similarity=0.183 Sum_probs=153.5
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001865 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (1002)
Q Consensus 192 ~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (1002)
+.+++.+.++++++|. ...|.++|..+..+++-....++|+++..+.+........ .+..+........
T Consensus 4 ~~~l~~~~~~~~vi~~---~~~~~~~~~~a~~~~~~~~~~~i~~~~~~i~~~~~~~~v~--------~~~~~~~~~~~~~ 72 (560)
T COG3829 4 EGILKSILDGPVVIDK---NTGIDVANALALAKRQKNAEAVIGRPLREILETLGMERVE--------QSRDKELTERLKL 72 (560)
T ss_pred hhhhhhcccceEEEEc---CCceeeechHHHHhhhcceEEEecccceeeccccCcceee--------ccCccceeeeeec
Confidence 4489999999999998 4459999999999999999999999888666554332211 2222222222223
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhhhhHHHHHHHhcCCCC
Q 001865 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351 (1002)
Q Consensus 272 kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~ 351 (1002)
+ + .. ..+..-++.++.|+++|++.++.|+++....-++..
T Consensus 73 ~-~-~~-~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~l------------------------------------- 112 (560)
T COG3829 73 K-V-KR-IVVVGKTPVDEQGRVVGVLEVFLDISEALELIEENL------------------------------------- 112 (560)
T ss_pred c-c-ee-EEEcCCceeecCCceeeeehhhhhhHHHHHHHHHHH-------------------------------------
Confidence 3 3 22 233344456788999999999999998443322210
Q ss_pred cccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccccccC
Q 001865 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQST 431 (1002)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1002)
T Consensus 113 -------------------------------------------------------------------------------- 112 (560)
T COG3829 113 -------------------------------------------------------------------------------- 112 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCC
Q 001865 432 DDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS 511 (1002)
Q Consensus 432 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys 511 (1002)
.++. ..|+.+++.+.++++++|.+|. ++++|.++..++|++
T Consensus 113 -------------------------------~~~~-----~~l~~il~~~~~~l~vvD~~G~---~i~~N~~~~~~~gl~ 153 (560)
T COG3829 113 -------------------------------RQLR-----QRLEAILDSIDDGLLVVDEDGI---IIYYNKAYAKLLGLS 153 (560)
T ss_pred -------------------------------HHHH-----HHHHHHHhhccCceEEEcCCCc---EEEEcHHHHHHhCCC
Confidence 0000 1189999999999999999988 999999999999999
Q ss_pred hhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 001865 512 REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 512 ~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~ 591 (1002)
.++++|+++.++...... ....+.+..+++..........++. ..+..|++ .+|.+.|.+++++|+++-+.
T Consensus 154 ~e~~~gk~~~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~~~~~----i~~~~pv~-~~g~l~G~v~~~~~~~~l~~ 224 (560)
T COG3829 154 PEEVLGKHLLDVVSAGED----STLLEVLRTGKPIRDVVQTYNGNKI----IVNVAPVY-ADGQLIGVVGISKDVSELER 224 (560)
T ss_pred HHHHcCCcHHHHHhccCC----ceehhhhhcCCcceeeeeeecCCce----eEeeccEe-cCCcEEEEEEeecchHHHHH
Confidence 999999997666511111 1234566777775555444333332 34556776 46799999999999998776
No 480
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.85 E-value=2.1e-08 Score=102.86 Aligned_cols=127 Identities=24% Similarity=0.198 Sum_probs=82.3
Q ss_pred EEEEEEEcCCCeEEEEEEeecccccC-----------------------hHHHHHHHHHHHHHHhCCCC--CcceeEEEE
Q 001865 684 SVHLVELCGSGQYFAMKAMDKGVMLN-----------------------RNKVHRACAEREILDMLDHP--FVPALYASF 738 (1002)
Q Consensus 684 ~Vy~a~~~~~~~~~avK~~~~~~~~~-----------------------~~~~~~~~~E~~il~~l~hp--nIv~l~~~~ 738 (1002)
.||.|.. ..|..+|+|+.+.....- ........+|.+.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888887 567899999987531100 01123456799999999765 577777553
Q ss_pred eeCCeEEEEEeccC--CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-HHHcCcccCCCCCCcEEEecCCcEEEEec
Q 001865 739 QTKTHVCLITDYCP--GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY-LHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~--ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~-LH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
.-+|||||++ |..+..+.... ++......++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+||
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred ----CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 2369999997 55555443321 2244566777888885555 579999999999999999966 9999999
Q ss_pred cCCcc
Q 001865 816 DLSCL 820 (1002)
Q Consensus 816 G~a~~ 820 (1002)
|.+..
T Consensus 151 ~qav~ 155 (188)
T PF01163_consen 151 GQAVD 155 (188)
T ss_dssp TTEEE
T ss_pred Cccee
Confidence 98844
No 481
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.82 E-value=9.5e-08 Score=82.37 Aligned_cols=103 Identities=27% Similarity=0.422 Sum_probs=89.4
Q ss_pred ccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 001865 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (1002)
Q Consensus 481 ~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (1002)
++++++++|.+|. ++++|+++++++|++.++++|..+..+++++........+...+..+.....+..+...+|..+
T Consensus 1 ~~~~i~~~d~~~~---~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDLDGR---ILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECCCCc---EEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999999888 9999999999999999999999987777777776666666666666667778888888999999
Q ss_pred EEEEEEEeeecCCCCEEEEEEEEecC
Q 001865 561 WNLFHLQPMRDQKGEVQYFIGVQLDG 586 (1002)
Q Consensus 561 wv~~~~~pi~d~~G~v~~~vgi~~DI 586 (1002)
|+.....++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999889999999999986
No 482
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.77 E-value=1.8e-07 Score=80.52 Aligned_cols=103 Identities=24% Similarity=0.479 Sum_probs=86.5
Q ss_pred cCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 001865 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (1002)
Q Consensus 198 ~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (1002)
++++++++|. +|.++++|+++++++|++.++++|+.+..++++.........+...+..+.....++.....+|...
T Consensus 1 ~~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3578899998 7779999999999999999999999987677666665555666666666666777888888899999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEecc
Q 001865 278 WNLLTIAPIKDDEGKVLKFIGMQVEV 303 (1002)
Q Consensus 278 w~~~~~~pi~d~~G~v~~~v~i~~DI 303 (1002)
|+.+...++.+..|...+++++++||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999886
No 483
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.77 E-value=2.8e-08 Score=113.38 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=88.9
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEE
Q 001865 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (1002)
.++++++++++|++++|.+|. |+++|+++++++||+.++++|+++..+.+... .....+...+..+..+..+...
T Consensus 8 ~~~~il~~~~~gi~~~d~~~~---i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 82 (348)
T PRK11073 8 DAGQILNSLINSILLLDDDLA---IHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNEVT 82 (348)
T ss_pred hHHHHHhcCcCeEEEECCCCe---EeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccceE
Confidence 389999999999999999888 99999999999999999999999877765432 2234455566666555544455
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccccc
Q 001865 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~ 595 (1002)
..+||..+|+.++..|+. . .+++..++|||++++.+++
T Consensus 83 ~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~ 120 (348)
T PRK11073 83 LVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQE 120 (348)
T ss_pred EEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHH
Confidence 567999999999999997 2 2466778999999885433
No 484
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.75 E-value=8.2e-08 Score=117.58 Aligned_cols=140 Identities=16% Similarity=0.129 Sum_probs=105.0
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCc-EEEEEE
Q 001865 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLI 551 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~-~~~e~~ 551 (1002)
.++.++++++++++++|.+|. ++++|+++++++||+.++++|+++..+.+++. .....+.+.+..+.. ...+..
T Consensus 263 ~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 337 (607)
T PRK11360 263 LNELILESIADGVIAIDRQGK---ITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTEHVDLEIS 337 (607)
T ss_pred HHHHHHHhccCeEEEEcCCCC---EEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCCccceEEE
Confidence 378899999999999999888 99999999999999999999999887776542 233445555555444 345677
Q ss_pred EEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccccccCCchhhHHHHHHHHHHHhhhhhh
Q 001865 552 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNE 618 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~k~~~~~v~~ 618 (1002)
..+++|..+ +.++..|+++.+|.+.+++++++|||++++.+++.........+.+.+..+.|.+..
T Consensus 338 ~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~~~~~~~l~~~~~~~~hel~~ 403 (607)
T PRK11360 338 FPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVARQERLAALGELVAGVAHEIRN 403 (607)
T ss_pred EEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 788888876 899999999999999999999999999998654443222222233333444444433
No 485
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.73 E-value=4.6e-08 Score=110.19 Aligned_cols=114 Identities=14% Similarity=0.114 Sum_probs=89.1
Q ss_pred cchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEE
Q 001865 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (1002)
Q Consensus 185 ~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (1002)
....+.|+.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+..+ ..+...+..+.. .
T Consensus 2 ~~~~~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~-------~~~~~~l~~~~~-~ 70 (333)
T TIGR02966 2 SALLSRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRH-------PEFVEYLAAGRF-S 70 (333)
T ss_pred hhHHHHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccC-------HHHHHHHHhccc-C
Confidence 35567899999999999999999 777999999999999999999999997766443 123334444332 2
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 001865 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~ 314 (1002)
.......++|..+|+.+.+.|+.+.. ++++++|||++++.++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~~ 115 (333)
T TIGR02966 71 EPLELPSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMRR 115 (333)
T ss_pred CCeEeecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHHH
Confidence 23455568999999999999987642 6788999999998876644
No 486
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.73 E-value=2.7e-07 Score=101.30 Aligned_cols=236 Identities=19% Similarity=0.245 Sum_probs=154.5
Q ss_pred ccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHHHHHHHHHHHHhC-CCCCcceeEEE------EeeCC-eE
Q 001865 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS------FQTKT-HV 744 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~------~~~~~-~~ 744 (1002)
..+.||+|+-+.+|.+-... -.+-|++.+... .. ..+....|... .||-+..-+.+ .-..+ .+
T Consensus 15 ~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Ppp---a~---~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPP---AA---QAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCccccCCccceeeecchhh---chhheeecCCCc---hH---HHHHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 45779999999999876433 367788875421 11 11223334433 56644331111 11222 36
Q ss_pred EEEEeccCCCc-hhHHHh----hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcEEEEeccCCc
Q 001865 745 CLITDYCPGGE-LFLLLD----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 745 ~lV~E~~~ggs-L~~~l~----~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
.++|..+.|.. ...++. ++......+.-+...++.|+.+.+.||..|.+-+|+.++|+|+++++.|.|+|-..-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 78888886642 222222 3455678889999999999999999999999999999999999999999999866431
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCcccccccccccccccCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcC
Q 001865 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG 894 (1002)
. ..+.......+|.+.|.+||.-. +..-+...|-|.||+++++|+.|
T Consensus 166 i----------------------------~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~g 217 (637)
T COG4248 166 I----------------------------NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFG 217 (637)
T ss_pred e----------------------------ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhc
Confidence 1 11112233457999999999864 23345579999999999999975
Q ss_pred -CCCCCCCC-------hHHHHHHHHhC-----------CCCCCCCC---CCCHHHHHHHHHcccc--CcCCCCCChh
Q 001865 895 -YTPFRGKT-------RQKTFANILHK-----------DLKFPSST---PTSLHAKQLMYRLLHR--DPKSRLGSHE 947 (1002)
Q Consensus 895 -~~Pf~~~~-------~~~~~~~i~~~-----------~~~~~~~~---~~s~~~~~Ll~~~L~~--dP~~Rpt~~~ 947 (1002)
+.||.|.. ..+ ..|..+ ..+.|... -+++.+..|..+|+.. ++.-|||.+.
T Consensus 218 grHPysGI~~~~~ap~p~E--~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 218 GRHPYSGIPLISDAPNPLE--TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred CCCCCCcccccCCCCCcch--hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 99997631 111 122221 11222222 2466788999999865 4568999764
No 487
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.72 E-value=6.7e-09 Score=120.96 Aligned_cols=169 Identities=20% Similarity=0.328 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHc-CcccCCCCCCcEEEecCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccccccc
Q 001865 778 AEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 856 (1002)
Q Consensus 778 ~qil~aL~~LH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (1002)
.+.+.||.|+|.. ++||++|.|++|.++.+|..||+.|+++........ + .... .......
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--~------p~~~----------yd~~lp~ 167 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--Y------PFSE----------YDPPLPL 167 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc--c------cccc----------CCCCCCh
Confidence 4555999999975 999999999999999999999999998743321111 0 0000 0111111
Q ss_pred ccccCCcccccccccCCCCCChhhHHHHHHHHHHHH-cCCCCCCCCChHHHHHHHHhCCC---CCCCCCCCCHHHHHHHH
Q 001865 857 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILHKDL---KFPSSTPTSLHAKQLMY 932 (1002)
Q Consensus 857 ~~~Gt~~Y~aPE~l~~~~~~~~sDIwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~s~~~~~Ll~ 932 (1002)
...-...|.|||++.+...+.++|+|||||++|.+. .|+.-+........+ ....... .+-....++.++.+=|.
T Consensus 168 ~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-~~~~~~~~~~~~~~s~~~p~el~~~l~ 246 (700)
T KOG2137|consen 168 LLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-SFSRNLLNAGAFGYSNNLPSELRESLK 246 (700)
T ss_pred hhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchh-hhhhcccccccccccccCcHHHHHHHH
Confidence 223467899999999988889999999999999999 566665544332222 2222111 12223457789999999
Q ss_pred HccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhcc
Q 001865 933 RLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 933 ~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
++|..++.-||+ +.+++..|||.+.-...++.+
T Consensus 247 k~l~~~~~~rp~----~~~l~~~~ff~D~~~~aLrfL 279 (700)
T KOG2137|consen 247 KLLNGDSAVRPT----LDLLLSIPFFSDPGLKALRFL 279 (700)
T ss_pred HHhcCCcccCcc----hhhhhcccccCCchhhhhhhc
Confidence 999999999998 999999999999766666543
No 488
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.72 E-value=1.2e-07 Score=108.22 Aligned_cols=118 Identities=17% Similarity=0.212 Sum_probs=93.5
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEE
Q 001865 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (1002)
Q Consensus 187 ~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (1002)
+...+.++++++++|++++|. +|+|+++|+++++++||+.++++|+++..+.+... .....+...+..+..+...
T Consensus 5 ~~~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 79 (348)
T PRK11073 5 TLPDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDN 79 (348)
T ss_pred CcchHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCccccc
Confidence 345679999999999999998 78899999999999999999999999887765432 2234455666666655544
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhh
Q 001865 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~ 314 (1002)
...+.+||..+|+.++.+|+. . .+++..++|||++++.++++.
T Consensus 80 ~~~~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~ 122 (348)
T PRK11073 80 EVTLVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred ceEEEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHH
Confidence 455678999999999999986 2 246678999999998877654
No 489
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.71 E-value=2e-07 Score=114.24 Aligned_cols=128 Identities=13% Similarity=0.121 Sum_probs=105.1
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCC
Q 001865 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (1002)
Q Consensus 182 ~~L~~~~~~l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (1002)
..+.+....++.++++++++++++|. +|+|+++|+++++++||+.++++|+++..++++.. .....+...+..+.
T Consensus 255 ~~l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 329 (607)
T PRK11360 255 QALRETRSLNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGT 329 (607)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCC
Confidence 34566677889999999999999998 77799999999999999999999999887776542 23344555565554
Q ss_pred cE-EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001865 262 SY-CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 262 ~~-~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~~L~~ 315 (1002)
.. ..++...+++|..+ +.++..|+.|.+|.+.+++++++|||++++++++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~ 383 (607)
T PRK11360 330 EHVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVAR 383 (607)
T ss_pred CccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHH
Confidence 43 34566678888876 8999999999999999999999999999999988763
No 490
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.68 E-value=9.6e-08 Score=88.97 Aligned_cols=106 Identities=15% Similarity=0.279 Sum_probs=74.8
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEE
Q 001865 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (1002)
Q Consensus 191 l~~ile~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 270 (1002)
++.++++++.+++++|. +++|.++|+++.++++... ..+|+++..+.++... .....+.+.+..++....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~~-~~l~~~i~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPLSY-PNLKKIIEQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HHHH-HHHHHHHHHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCccch-HHHHHHHHHHHcCCCceEEEEe-
Confidence 46899999999999999 7779999999999999764 5689999988766333 3334445556666653333332
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEecch
Q 001865 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 271 ~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DIT 304 (1002)
..+|. |+.+++.|++|++|...|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35554 778999999999999999999999998
No 491
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.66 E-value=9.5e-08 Score=107.61 Aligned_cols=103 Identities=11% Similarity=0.026 Sum_probs=82.0
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEE
Q 001865 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (1002)
.|+.+++++++||+++|.+|. |+++|++|++++||++++++|+++..+..++ . +.+.+..+.. ......
T Consensus 7 ~l~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~---~----~~~~l~~~~~-~~~~~~ 75 (333)
T TIGR02966 7 RFRAAAQALPDAVVVLDEEGQ---IEWCNPAAERLLGLRWPDDLGQRITNLIRHP---E----FVEYLAAGRF-SEPLEL 75 (333)
T ss_pred HHHHHHHhCcCcEEEECCCCc---EEEEcHHHHHHhCCChHHHcCCcHHHHccCH---H----HHHHHHhccc-CCCeEe
Confidence 389999999999999999888 9999999999999999999999977776542 2 2333333322 233555
Q ss_pred EecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccc
Q 001865 553 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~ 591 (1002)
..++|..+|+..+..|+.+.. ++++++|||++++
T Consensus 76 ~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~ 109 (333)
T TIGR02966 76 PSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRR 109 (333)
T ss_pred ecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHH
Confidence 668999999999999997642 6788899999887
No 492
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.62 E-value=2.9e-07 Score=103.21 Aligned_cols=119 Identities=27% Similarity=0.600 Sum_probs=105.4
Q ss_pred HHHHHHhcc---ccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCC--CccccCCCCChHHHHHHHHHHhcCCcEEE
Q 001865 474 LATTLERIE---KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (1002)
Q Consensus 474 l~~i~e~~~---~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~--~~~l~~~d~~~~~~~~l~~~l~~~~~~~~ 548 (1002)
++.++..+. ..+++.+++-.|++|+|+|+.||++.||.+.|++.++ +.+++++-.+....+.+++.+.+.+.-.+
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qf 95 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQF 95 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcce
Confidence 677775554 4555566666789999999999999999999999988 66778888888889999999999998899
Q ss_pred EEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCccccc
Q 001865 549 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~ 592 (1002)
|.-++.|+.+.+|..+.+.||+++...++.|+..+.|||.-||+
T Consensus 96 EillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 96 EILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred eeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 99999999999999999999999999999999999999999996
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.60 E-value=3.3e-07 Score=96.44 Aligned_cols=138 Identities=22% Similarity=0.194 Sum_probs=102.4
Q ss_pred ccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccC------h-------------HHHHHHHHHHHHHHhCCCC--
Q 001865 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN------R-------------NKVHRACAEREILDMLDHP-- 729 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~------~-------------~~~~~~~~E~~il~~l~hp-- 729 (1002)
+.+...||-|.-|.||.|.+. .|.++|||.-+.+...- . .......+|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 455678999999999999984 68899999766431100 0 0112345788999998665
Q ss_pred CcceeEEEEeeCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc
Q 001865 730 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 730 nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~ 809 (1002)
.|+..+++ +.-++||||++|-.|...- ++......++..|+.-+..+-..||||+|+.+-||+++++|.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 77877765 4558999999887775442 234445556666676666666899999999999999999999
Q ss_pred EEEEeccCCcc
Q 001865 810 VSLTDFDLSCL 820 (1002)
Q Consensus 810 vkL~DFG~a~~ 820 (1002)
+.++||--+..
T Consensus 241 ~~vIDwPQ~v~ 251 (304)
T COG0478 241 IVVIDWPQAVP 251 (304)
T ss_pred EEEEeCccccc
Confidence 99999997743
No 494
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.59 E-value=5.6e-07 Score=93.16 Aligned_cols=142 Identities=20% Similarity=0.244 Sum_probs=96.1
Q ss_pred ccccCCccccccccccCcEEEEEEEEcCCCeEEEEEEeecccccChHHHH------HHHHHHHHHHhC---CCCCcceeE
Q 001865 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVH------RACAEREILDML---DHPFVPALY 735 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~avK~~~~~~~~~~~~~~------~~~~E~~il~~l---~hpnIv~l~ 735 (1002)
.+..+.|.+++.+-......|.+... +|+.|++|..+........... ...+.+..+..+ +.-....++
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y 104 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY 104 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence 35568899999999999998988887 7789999998754211111111 112233333333 333333333
Q ss_pred EEEe-----eCCeEEEEEeccCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCcE
Q 001865 736 ASFQ-----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 810 (1002)
Q Consensus 736 ~~~~-----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~v 810 (1002)
.+.. .....++||||++|..|.++.. +++ .+...|..++..||+.|+.|+|..|+|++++. +.+
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-~~i 173 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-NGI 173 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-CcE
Confidence 3222 2345578999999998877643 222 24456778899999999999999999999995 459
Q ss_pred EEEeccCCc
Q 001865 811 SLTDFDLSC 819 (1002)
Q Consensus 811 kL~DFG~a~ 819 (1002)
+++||+..+
T Consensus 174 ~iID~~~k~ 182 (229)
T PF06176_consen 174 RIIDTQGKR 182 (229)
T ss_pred EEEECcccc
Confidence 999999653
No 495
>PF12860 PAS_7: PAS fold
Probab=98.59 E-value=1.9e-07 Score=88.39 Aligned_cols=105 Identities=20% Similarity=0.275 Sum_probs=75.1
Q ss_pred HHhcCCcEEEEeCCCCCCcEEEechHHHHHcCCChhHH-cCCCCCccc---------CCCCChHHHHHHHHHHHcCCcEE
Q 001865 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV-VGRNCRFLQ---------GAGTDPEDVAKIRETLQNGQSYC 264 (1002)
Q Consensus 195 le~~~d~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEl-lG~~~~~l~---------~~~~~~~~~~~i~~~l~~g~~~~ 264 (1002)
|+++++||++.|. +|+++++|++|.+++|++.+.+ .|.++..+. .+.....................
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4789999999999 7889999999999999999998 788865332 21222233333333344444433
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHHHH
Q 001865 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (1002)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~e~ 311 (1002)
.+ ....||. |++++..|+. +| |+|.++.|||+++++|+
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~~--~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPLP--DG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eE--EECCCCE--EEEEEeEECC--CC---CEEEEEEeCCHHHHhcC
Confidence 33 3467886 7888888884 45 57789999999999874
No 496
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.58 E-value=6.2e-07 Score=94.29 Aligned_cols=105 Identities=28% Similarity=0.291 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHhCCC--CCcceeEEEEeeC----CeEEEEEeccCCC-chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHH
Q 001865 714 HRACAEREILDMLDH--PFVPALYASFQTK----THVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY 786 (1002)
Q Consensus 714 ~~~~~E~~il~~l~h--pnIv~l~~~~~~~----~~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~ 786 (1002)
....+|...+..|.. =.++.++++.... ...++|||++++. +|.+++..... ++......++.+++..++-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHH
Confidence 456677777666632 2345666666542 2458999999874 79999876422 6777888999999999999
Q ss_pred HHHcCcccCCCCCCcEEEecCC---cEEEEeccCCcc
Q 001865 787 LHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 820 (1002)
Q Consensus 787 LH~~gIiHrDLKP~NILl~~~g---~vkL~DFG~a~~ 820 (1002)
||.+||+|+|++|.|||++.++ .+.|+||+.+..
T Consensus 134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999999999999999887 899999998754
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.57 E-value=8.4e-07 Score=91.64 Aligned_cols=140 Identities=14% Similarity=0.145 Sum_probs=102.3
Q ss_pred cccCcEEEEEEEEcCCCeEEEEEEeeccc---ccChHHHHHHHHHHHHHHhCCCC--CcceeEEEEe-e----CCeEEEE
Q 001865 678 GSGDTGSVHLVELCGSGQYFAMKAMDKGV---MLNRNKVHRACAEREILDMLDHP--FVPALYASFQ-T----KTHVCLI 747 (1002)
Q Consensus 678 G~G~~g~Vy~a~~~~~~~~~avK~~~~~~---~~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~-~----~~~~~lV 747 (1002)
|+||-|-|+.... .|+.|-+|.-.... ..-+.....+.+|...+..|..- .++++. ++. . .-.-+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 7789999999876 44468888654111 11133456788898888887422 255555 232 1 2246799
Q ss_pred EeccCC-CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCcEEEecCCc--EEEEeccCCcc
Q 001865 748 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 820 (1002)
Q Consensus 748 ~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~~LH~~gIiHrDLKP~NILl~~~g~--vkL~DFG~a~~ 820 (1002)
+|-+.| .+|.+++....-...+......++.+++..+.-||+.|+.|+|+.+.||+++.+|. +.++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998843 68888886644345677888899999999999999999999999999999987777 99999997743
No 498
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.53 E-value=3.2e-07 Score=102.83 Aligned_cols=120 Identities=32% Similarity=0.639 Sum_probs=102.8
Q ss_pred HHHHHHHhcC--C-cEEEEeCCCCCCcEEEechHHHHHcCCChhHHcCCCCC--cccCCCCChHHHHHHHHHHHcCCcEE
Q 001865 190 IVKDALSTFQ--Q-TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR--FLQGAGTDPEDVAKIRETLQNGQSYC 264 (1002)
Q Consensus 190 ~l~~ile~~~--d-~i~i~D~~~~dG~I~~vN~a~~~l~Gys~eEllG~~~~--~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (1002)
.++.++..+. | .+++-++.-.|..|+|+|..||++.||.+.|+..+++. +++++..+....+.+++.++..+..+
T Consensus 15 FLENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~q 94 (971)
T KOG0501|consen 15 FLENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQ 94 (971)
T ss_pred HHHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcc
Confidence 4444444433 3 34444555558889999999999999999999999855 78888889999999999999999989
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecchhhhHH
Q 001865 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (1002)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~i~~DITerk~~ 309 (1002)
.|+..++|+...+|+.+.+.||+++...++-|+++++|||..|+-
T Consensus 95 fEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 95 FEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred eeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 999999999999999999999999999999999999999998874
No 499
>PF12860 PAS_7: PAS fold
Probab=98.52 E-value=3.3e-07 Score=86.72 Aligned_cols=104 Identities=22% Similarity=0.284 Sum_probs=73.3
Q ss_pred HHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhh-cCCCCcccc---------CCCCChHHHHHHHHHHhcCCcEE
Q 001865 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI-LGRNCRFLQ---------GPETDPATVRKIRAAIDNQTDVT 547 (1002)
Q Consensus 478 ~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEl-iG~~~~~l~---------~~d~~~~~~~~l~~~l~~~~~~~ 547 (1002)
++++++||++.|.+|+ ++++|++|.+++|++.+.+ .|.++..++ .+.............+.......
T Consensus 1 Ld~l~~Gv~v~D~~~r---l~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDSDGR---LVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcCCCe---EEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4678999999999888 9999999999999999998 788854433 12222223333333333333333
Q ss_pred EEEEEEecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCCcccccc
Q 001865 548 VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 548 ~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
.+ ....||+ |+.++..|+ .+| |+|.++.|||+++++|
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E 114 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAE 114 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhc
Confidence 33 4568887 667788888 456 5788899999999854
No 500
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.50 E-value=4.5e-07 Score=84.45 Aligned_cols=106 Identities=20% Similarity=0.316 Sum_probs=73.9
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEeccHHHHHHcCCChhhhcCCCCccccCCCCChHHHHHHHHHHhcCCcEEEEEEEE
Q 001865 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~g~~~~Iv~vN~a~~~l~Gys~eEliG~~~~~l~~~d~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.++++++.++.++|.++. |.+.|+++.++|+... ..+|+++..+.++.........+ +.+..++....+...
T Consensus 1 L~~il~s~~~~i~~vD~~~~---I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~~~~l~~~i-~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDRNLR---IRYFNPAAARLFNLSP-SDIGRPLFDIHPPLSYPNLKKII-EQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEE-SCGC-SS---G-GGTTSBCCCSS-HHHHHHHHHHH-HHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcCCCe---EEEeChhHhhhcCCCh-HHCCCCHHHcCCccchHHHHHHH-HHHHcCCCceEEEEe-
Confidence 46789999999999999877 9999999999999764 66899988887664444444444 445555543333333
Q ss_pred ecCCcEEEEEEEEEeeecCCCCEEEEEEEEecCC
Q 001865 554 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
..+|. |+..+..|++|++|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35665 667889999999999999999999998
Done!