Query 001865
Match_columns 1002
No_of_seqs 508 out of 4695
Neff 8.2
Searched_HMMs 29240
Date Tue Mar 26 22:43:04 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/001865.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_49-53//hhsearch_pdb/001865hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 452.8 23.8 278 668-974 31-310 (311)
2 4b9d_A Serine/threonine-protei 1.0 1 1 437.3 24.3 261 668-961 23-283 (350)
3 3ubd_A Ribosomal protein S6 ki 1.0 1 1 435.4 21.8 277 666-974 21-303 (304)
4 3v5w_A G-protein coupled recep 1.0 1 1 434.0 27.7 438 497-976 6-473 (689)
5 4fie_A Serine/threonine-protei 1.0 1 1 431.5 28.2 265 658-961 142-407 (423)
6 4fih_A Serine/threonine-protei 1.0 1 1 429.5 26.1 265 658-961 65-330 (346)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 418.3 25.3 261 661-960 7-268 (275)
8 3uto_A Twitchin; kinase, muscl 1.0 1 1 415.7 27.1 263 668-966 156-422 (573)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 411.7 22.5 260 667-962 56-330 (336)
10 4b99_A Mitogen-activated prote 1.0 1 1 411.7 28.8 268 668-966 53-356 (398)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=452.80 Aligned_cols=278 Identities=37% Similarity=0.658 Sum_probs=248.5
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
Q ss_conf 68942232116669389999999179919999994054224857899999999999957999844247898608829999
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iV 747 (1002)
.++|++++.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.+|++++||||++++++|.+.+.+|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
T ss_conf 52368988983164849999999999989999998888877978999999999999867998989199999738989999
Q ss_pred EECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCC
Q ss_conf 96168983567773179999999999999999999999999849431789999589805992999842677545789877
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~~~ikL~DFG~a~~~~~~~~~ 827 (1002)
||||+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|........
T Consensus 111 mEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~- 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK- 187 (311)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT-
T ss_pred EECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC-
T ss_conf 9648998999999874--9999999999999999999999988782687878996985898889987687502577877-
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 77851233211469999742235666666554687644520003888888305999999999999099999999968999
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 907 (1002)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+....+
T Consensus 188 ------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~ 243 (311)
T 4aw0_A 188 ------------------------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243 (311)
T ss_dssp ------------------------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf ------------------------65436755680307998976899996898998999999997498998997999999
Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH--CHHHHHCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 9998279999999988898999999802049388799734--099998199867998113340599988
Q 001865 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~l~~LL~~mL~~dP~~Rpt~~~--~a~elL~Hpff~~~~~~~~~~~~~~~~ 974 (1002)
..+......++. .++.++++||.+||.+||.+|+|+.+ ....+++||||++++|..+....||.+
T Consensus 244 ~~i~~~~~~~p~--~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l 310 (311)
T 4aw0_A 244 AKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310 (311)
T ss_dssp HHHHHTCCCCCT--TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred HHHHCCCCCCCC--CCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHCCCCCCCC
T ss_conf 999719999996--5699999999997628975780967975877987798758989899407999899
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=437.27 Aligned_cols=261 Identities=25% Similarity=0.481 Sum_probs=234.6
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
Q ss_conf 68942232116669389999999179919999994054224857899999999999957999844247898608829999
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iV 747 (1002)
+++|++++.||+|+||.||+|.++.+++.||||++.+... .......+.+|+.+|++++|||||++++++...+.+|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC-CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 1255884797027793999999889998999999865878-979999999999999877998989199999989999999
Q ss_pred EECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCC
Q ss_conf 96168983567773179999999999999999999999999849431789999589805992999842677545789877
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~~~ikL~DFG~a~~~~~~~~~ 827 (1002)
||||+||+|.+++..+....+++..++.|+.||+.||.|||++|||||||||+|||++.++.+||+|||+|+.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--- 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--- 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH---
T ss_pred EECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCC---
T ss_conf 94889983999999738999978999999999999999999899151359789979878999897646521440688---
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 77851233211469999742235666666554687644520003888888305999999999999099999999968999
Q 001865 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 907 (1002)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+....+
T Consensus 179 ------------------------~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 179 ------------------------VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp ------------------------HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf ------------------------54101457883603999987999895999999999999999787998996999999
Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHCHHHHHCCCCCCCC
Q ss_conf 999827999999998889899999980204938879973409999819986799
Q 001865 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~l~~LL~~mL~~dP~~Rpt~~~~a~elL~Hpff~~~ 961 (1002)
..+..+..+ +....++.++.+||.+||..||.+||| +.|+|+||||+.-
T Consensus 235 ~~i~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 235 LKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDRPS----VNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHTT
T ss_pred HHHHCCCCC-CCCCCCCHHHHHHHHHHCCCCHHHCCC----HHHHHCCHHHHCC
T ss_conf 999808999-997557999999999985589667908----9999639976167
No 3
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=435.41 Aligned_cols=277 Identities=42% Similarity=0.747 Sum_probs=241.3
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEC---CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
Q ss_conf 34689422321166693899999991---799199999940542248578999999999999579998442478986088
Q 001865 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 666 ~~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 742 (1002)
.+.++|++++.||+|+||.||+|++. .+++.||+|++.+...... ....+.+|+.+|++++||||+++++++...+
T Consensus 21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHH-HHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
T ss_conf 895565898897218883999999855887897999999815776847-8999999999998779979990999999899
Q ss_pred EEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCC
Q ss_conf 29999961689835677731799999999999999999999999998494317899995898059929998426775457
Q 001865 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~iV~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~~~ikL~DFG~a~~~~ 822 (1002)
.+|+|||||+||+|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEEEEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECC
T ss_conf 999999757998889999755--999999999999999999999997799588887899578689988762366343326
Q ss_pred CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 89877778512332114699997422356666665546876445200038888883059999999999990999999999
Q 001865 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 902 (1002)
.. .....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+
T Consensus 178 ~~---------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 178 DH---------------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp ------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC---------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 88---------------------------763045441815079999656887877763611999999985989989849
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH-HCHHHHHCCCCCCCCCHHHHH--CCCCCCC
Q ss_conf 68999999827999999998889899999980204938879973-409999819986799811334--0599988
Q 001865 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR--CMNPPEL 974 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~l~~LL~~mL~~dP~~Rpt~~-~~a~elL~Hpff~~~~~~~~~--~~~~~~~ 974 (1002)
..+.+..+......+|. .++.++.+||.+||..||.+|||+. ..++|+++||||++++|..+. .+.||..
T Consensus 231 ~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~ 303 (304)
T 3ubd_A 231 RKETMTMILKAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFK 303 (304)
T ss_dssp HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSC
T ss_pred HHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 99999999718999987--68999999999986469878799986789999769040378999998489994967
No 4
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=434.03 Aligned_cols=438 Identities=27% Similarity=0.453 Sum_probs=291.2
Q ss_pred EEECCHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCE
Q ss_conf 78525888998299966563999764469999968999999999639939999999945995999999998655489989
Q 001865 497 IIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEV 576 (1002)
Q Consensus 497 i~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v 576 (1002)
-+.+|.+|.+..+++.++..|+....+..|+... ...++..+.......++..+..+-|..+|-.....+..+..+.+
T Consensus 6 ~i~a~~~~l~a~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~i~~q~ig~~~f~~f~~~~~~~~~~~~ 83 (689)
T 3v5w_A 6 AVLADVSYLMAMEKSKATPAARASKKILLPEPSI--RSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLNHLEEARPLV 83 (689)
T ss_dssp ------------------------CCCCCCCTTH--HHHHHHHHHHTTCCSHHHHHTSHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHH--HHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHH
T ss_conf 6575699999856589872112214530979408--89999998402551433366765789999998627646552799
Q ss_pred EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH-----HHHH-------HHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 99999996387563212248803447888999-----9987-------44345653027988999223320577666999
Q 001865 577 QYFIGVQLDGSEHLEPLRNSIPEATAEESEKL-----VKQT-------AENVNEAVKELPDANLTPEDLWANHSKVVHPK 644 (1002)
Q Consensus 577 ~~~ig~~~DITerk~~e~~~~~~~~~~e~~~l-----~k~~-------~~~i~~al~~l~~~~~~p~~l~an~s~~~~~~ 644 (1002)
.+ ..+|.+-...+ ..+......... .++. ...+...+.........|.+++......+..-
T Consensus 84 ~~----~~~v~~~~~~~---~~~~r~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~ 156 (689)
T 3v5w_A 84 EF----YEEIKKYEKLE---TEEERVARSREIFDSYIMKELLACSHPFSKSATEHVQGHLGKKQVPPDLFQPYIEEICQN 156 (689)
T ss_dssp HH----HHHHHHHHTCC---SHHHHHHHHHHHHTSHHHHHHHSSSSCCCHHHHHHHHHHHHTTCCCTTTTHHHHHHHHHH
T ss_pred HH----HHHHHHHHCCC---CHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 99----99987662258---604678999999997516023421575646789999976655069868899999999987
Q ss_pred C--------CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHH
Q ss_conf 9--------99999833678853056454346894223211666938999999917991999999405422485789999
Q 001865 645 P--------HRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRA 716 (1002)
Q Consensus 645 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~ 716 (1002)
. ..+....+...........++..++|++++.||+|+||.||+|.++.+++.||+|++.+............
T Consensus 157 l~~~~f~~~~~s~~~~r~~q~k~~e~~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~ 236 (689)
T 3v5w_A 157 LRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA 236 (689)
T ss_dssp HTTHHHHHHHHSHHHHHHHHHHHHHTTCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHH
T ss_pred HCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHH
T ss_conf 53586302246706778873543203799956892888898316483999999999998999999757882525568999
Q ss_pred HHH---HHHHHHCCCCCCCEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999---99999579998442478986088299999616898356777317999999999999999999999999984943
Q 001865 717 CAE---REILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGII 793 (1002)
Q Consensus 717 ~~E---~~il~~l~hp~Iv~l~~~~~~~~~~~iV~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~Ii 793 (1002)
.+| +.+++.++|||||+++++|.+.+.+|+|||||+||+|.+++... +.+++..++.|+.||+.||.|||++|||
T Consensus 237 ~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIi 314 (689)
T 3v5w_A 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVV 314 (689)
T ss_dssp HHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999996489998717999999899889999468998299999866--9999999999999999999999978854
Q ss_pred CCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 1789999589805992999842677545789877778512332114699997422356666665546876445200038-
Q 001865 794 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG- 872 (1002)
Q Consensus 794 HrDLkP~NIli~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~- 872 (1002)
||||||+|||++.+|++||+|||+|..... ....+.+||+.|||||++.+
T Consensus 315 HRDLKPeNILld~~G~vKL~DFGlA~~~~~-----------------------------~~~~t~~GTp~YmAPEvl~~~ 365 (689)
T 3v5w_A 315 YRDLKPANILLDEHGHVRISDLGLACDFSK-----------------------------KKPHASVGTHGYMAPEVLQKG 365 (689)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECSS-----------------------------CCCCSCCSCGGGCCHHHHSTT
T ss_pred CCCCCHHHEEEECCCCEEECCCCEEEECCC-----------------------------CCCCCCCCCCCCCCHHHHHCC
T ss_conf 168866875980899889645655666378-----------------------------987776578673188998479
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCC---CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH-HC
Q ss_conf 88888305999999999999099999999---968999999827999999998889899999980204938879973-40
Q 001865 873 AGHTSAVDWWALGILLYEMLYGYTPFRGK---TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EG 948 (1002)
Q Consensus 873 ~~~~~~sDIwSlG~il~eLltG~~Pf~~~---~~~~~~~~i~~~~~~~~~~~~~s~~l~~LL~~mL~~dP~~Rpt~~-~~ 948 (1002)
..|+.++|||||||++|+|++|++||.+. +.......+......++. .++.++++||.+||..||.+|++.. ..
T Consensus 366 ~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~--~~S~~a~dLI~~lL~~dP~~Rl~~~~~g 443 (689)
T 3v5w_A 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRG 443 (689)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCGGGCTTCSSST
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHCCCCHHHCCCCCCCC
T ss_conf 99995999999999999998687999999867799999850579888876--6999999999997608986879998889
Q ss_pred HHHHHCCCCCCCCCHHHH--HCCCCCCCCC
Q ss_conf 999981998679981133--4059998899
Q 001865 949 ANEIKKHPFFKGVNWALV--RCMNPPELDA 976 (1002)
Q Consensus 949 a~elL~Hpff~~~~~~~~--~~~~~~~~~~ 976 (1002)
+.++++||||++++|..+ ..+.||..|.
T Consensus 444 a~ei~~HpfF~~idW~~l~~~~~~pP~~P~ 473 (689)
T 3v5w_A 444 AQEVKESPFFRSLDWQMVFLQKYPPPLIPP 473 (689)
T ss_dssp HHHHTTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred HHHHHCCCCCCCCCHHHHHCCCCCCCCCCC
T ss_conf 999966915047898899708999593699
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=431.50 Aligned_cols=265 Identities=29% Similarity=0.466 Sum_probs=232.6
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 53056454346894223211666938999999917991999999405422485789999999999995799984424789
Q 001865 658 KILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (1002)
Q Consensus 658 ~~~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~ 737 (1002)
.+..++.. ...|++++.||+|+||.||+|.++.+++.||||++..... .....+.+|+.+|+.++|||||+++++
T Consensus 142 ~~~~~~dp--~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~ 216 (423)
T 4fie_A 142 LVVDPGDP--RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNS 216 (423)
T ss_dssp HHSCSSCG--GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCCCCCCH--HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCH---HHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 66899982--6843861696248184899999999998999999862554---689999999999985799898716899
Q ss_pred EEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCC
Q ss_conf 86088299999616898356777317999999999999999999999999984943178999958980599299984267
Q 001865 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 738 ~~~~~~~~iV~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~~~ikL~DFG~ 817 (1002)
|...+.+|||||||+||+|.+++... .+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+
T Consensus 217 ~~~~~~~~iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGl 293 (423)
T 4fie_A 217 YLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 293 (423)
T ss_dssp EEETTEEEEEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTT
T ss_pred EEECCEEEEEEECCCCCCHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCC
T ss_conf 99899999999698998289887616---989999999999999999999988904465787778985899989803726
Q ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 75457898777785123321146999974223566666655468764452000388888830599999999999909999
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 897 (1002)
|...... .....+.+||+.|||||++.+..|+.++|||||||++|+|++|++|
T Consensus 294 a~~~~~~---------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P 346 (423)
T 4fie_A 294 CAQVSKE---------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346 (423)
T ss_dssp CEECCSS---------------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CEECCCC---------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 5477788---------------------------7643466647472799997799999689999999999999978799
Q ss_pred CCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHCHHHHHCCCCCCCC
Q ss_conf 999996899999982799-9999998889899999980204938879973409999819986799
Q 001865 898 FRGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~LL~~mL~~dP~~Rpt~~~~a~elL~Hpff~~~ 961 (1002)
|.+.+....+..+..... .+.....++..+.+||.+||..||.+|+| +.|+|+||||+..
T Consensus 347 F~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~ell~Hp~~~~~ 407 (423)
T 4fie_A 347 YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 407 (423)
T ss_dssp TTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCC----HHHHHCCHHHCCC
T ss_conf 898699999999972799887650129999999999986789568909----9999609875689
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=429.46 Aligned_cols=265 Identities=29% Similarity=0.466 Sum_probs=231.8
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 53056454346894223211666938999999917991999999405422485789999999999995799984424789
Q 001865 658 KILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (1002)
Q Consensus 658 ~~~~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~ 737 (1002)
.+..++.. ...|+++++||+|+||.||+|.++.+++.||||++..... .....+.+|+.+|+.++|||||+++++
T Consensus 65 ~~~~~~dp--~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~ 139 (346)
T 4fih_A 65 LVVDPGDP--RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNS 139 (346)
T ss_dssp HHSCSSCG--GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCCCCCCH--HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCH---HHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 46799981--5753870796027282999999989998999999852765---689999999999986799899919999
Q ss_pred EEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCC
Q ss_conf 86088299999616898356777317999999999999999999999999984943178999958980599299984267
Q 001865 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 738 ~~~~~~~~iV~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~~~ikL~DFG~ 817 (1002)
|...+.+|||||||+||+|.+++... .+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||+
T Consensus 140 ~~~~~~~~ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGl 216 (346)
T 4fih_A 140 YLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 216 (346)
T ss_dssp EEETTEEEEEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEECCEEEEEEECCCCCCHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCC
T ss_conf 99899999999698998089998718---989999999999999999999988835562788997887999889902757
Q ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 75457898777785123321146999974223566666655468764452000388888830599999999999909999
Q 001865 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 897 (1002)
|...... .....+.+||+.|||||++.+..|+.++|||||||++|+|++|++|
T Consensus 217 a~~~~~~---------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P 269 (346)
T 4fih_A 217 CAQVSKE---------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269 (346)
T ss_dssp CEECCSS---------------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CEECCCC---------------------------CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 5366788---------------------------7753465627582799997799999689999999999999978799
Q ss_pred CCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHCHHHHHCCCCCCCC
Q ss_conf 999996899999982799-9999998889899999980204938879973409999819986799
Q 001865 898 FRGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~LL~~mL~~dP~~Rpt~~~~a~elL~Hpff~~~ 961 (1002)
|.+.+....+..+..... .++....++.++.+||.+||..||.+||| +.|+|+||||+..
T Consensus 270 F~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~e~l~Hp~~~~~ 330 (346)
T 4fih_A 270 YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 330 (346)
T ss_dssp TTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCC----HHHHHCCHHHCCC
T ss_conf 898599999999971799988750229999999999986799568909----9999609865689
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=418.31 Aligned_cols=261 Identities=31% Similarity=0.520 Sum_probs=232.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
Q ss_conf 56454346894223211666938999999917991999999405422485789999999999995799984424789860
Q 001865 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 661 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 740 (1002)
..|.++ ++|++++.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.++++++||||+++++++..
T Consensus 7 ~~G~~i--g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~ 84 (275)
T 3hyh_A 7 ADGAHI--GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp ---------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCCEE--ECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
T ss_conf 999893--386899998217681999999999998999999837886787899999999999987799899929999998
Q ss_pred CCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
Q ss_conf 88299999616898356777317999999999999999999999999984943178999958980599299984267754
Q 001865 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~iV~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~~~ikL~DFG~a~~ 820 (1002)
.+.+|+||||+ +|+|.+++..+ +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|..
T Consensus 85 ~~~~~ivmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~ 161 (275)
T 3hyh_A 85 KDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp SSEEEEEEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred CCEEEEEEECC-CCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEE
T ss_conf 99899999278-99789999874--9999999999999999999999988930666875876887999899945477726
Q ss_pred CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 5789877778512332114699997422356666665546876445200038888-883059999999999990999999
Q 001865 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~ 899 (1002)
.... ....+.+||+.|||||++.+..+ +.++|||||||++|+|++|+.||.
T Consensus 162 ~~~~----------------------------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~ 213 (275)
T 3hyh_A 162 MTDG----------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213 (275)
T ss_dssp -----------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCC----------------------------CCCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 6788----------------------------746770289352774550689888983656878999999998879989
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHCHHHHHCCCCCCC
Q ss_conf 9996899999982799999999888989999998020493887997340999981998679
Q 001865 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~LL~~mL~~dP~~Rpt~~~~a~elL~Hpff~~ 960 (1002)
+.+....+..+..+...++. .++..+.+||.+||..||++||| +.|+|+||||+.
T Consensus 214 ~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~s----~~eil~hpw~k~ 268 (275)
T 3hyh_A 214 DESIPVLFKNISNGVYTLPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFKV 268 (275)
T ss_dssp CSSHHHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHHHCHHHHT
T ss_pred CCCHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHCCCCHHHCCC----HHHHHCCCCCCC
T ss_conf 98999999999749999987--79999999999986589668919----999971920065
No 8
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=415.70 Aligned_cols=263 Identities=28% Similarity=0.461 Sum_probs=234.7
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
Q ss_conf 68942232116669389999999179919999994054224857899999999999957999844247898608829999
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iV 747 (1002)
.++|++++.||+|+||.||+|.++.+++.||+|++... .......+.+|+.+|+.++||||++++++|...+.+|+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECC---CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
T ss_conf 53618988996164849999999889989999999152---420599999999999868998989499999989988999
Q ss_pred EECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC--CCEEEEECCCCCCCCCCC
Q ss_conf 961689835677731799999999999999999999999998494317899995898059--929998426775457898
Q 001865 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 748 ~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~--~~ikL~DFG~a~~~~~~~ 825 (1002)
||||+||+|.+++... ...+++..++.++.||+.||.|||+++|+||||||+|||++.+ +.+||+|||+|......
T Consensus 233 ~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~- 310 (573)
T 3uto_A 233 YEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK- 310 (573)
T ss_dssp EECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred EEECCCCCHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECCCC-
T ss_conf 8606999599999986-79999999999999999999999988923056876551214788897899406630685699-
Q ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 77778512332114699997422356666665546876445200038888883059999999999990999999999689
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 905 (1002)
......+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+...
T Consensus 311 ---------------------------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~ 363 (573)
T 3uto_A 311 ---------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363 (573)
T ss_dssp ---------------------------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred ---------------------------CCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf ---------------------------82323477945149999689998969999999999999997879979869999
Q ss_pred HHHHHHHCCCCCCCC--CCCCHHHHHHHHHCCCCCCCCCCCCHHCHHHHHCCCCCCCCCHHHH
Q ss_conf 999998279999999--9888989999998020493887997340999981998679981133
Q 001865 906 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~--~~~s~~l~~LL~~mL~~dP~~Rpt~~~~a~elL~Hpff~~~~~~~~ 966 (1002)
.+..+......++.. ..++..+++||.+||..||.+||| +.|+|+||||+..+|+..
T Consensus 364 ~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t----~~e~l~Hpw~~~~~~~~~ 422 (573)
T 3uto_A 364 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQALEHPWLTPGNAPGR 422 (573)
T ss_dssp HHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTSCCCCTTT
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCC----HHHHHCCCCCCCCCCCCC
T ss_conf 99999848999895324689999999999886489568929----999953957487989875
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=411.72 Aligned_cols=260 Identities=24% Similarity=0.358 Sum_probs=224.5
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
Q ss_conf 46894223211666938999999917991999999405422485789999999999995799984424789860882999
Q 001865 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~i 746 (1002)
..+.|++.++||+|+||.||+|.++.+++.||||++..... ..+|+.+++.++|||||++++++...+.+||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred CHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH--------HHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 53351768685138780999999889998999999788886--------9999999985799899939999998999999
Q ss_pred EEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CEEEEECCCCCCCCCCC
Q ss_conf 99616898356777317999999999999999999999999984943178999958980599-29998426775457898
Q 001865 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 747 V~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~~-~ikL~DFG~a~~~~~~~ 825 (1002)
|||||+||+|.+++... +.+++..++.++.||+.||.|||+++||||||||+|||++.+| .+||+|||+|+......
T Consensus 128 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp EECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred EEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCCC
T ss_conf 99665998699999876--9999999999999999999999988904261677887995899979996278776856787
Q ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 77778512332114699997422356666665546876445200038888883059999999999990999999999689
Q 001865 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 905 (1002)
. ..........+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+...
T Consensus 206 ~----------------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~ 263 (336)
T 4g3f_A 206 L----------------------GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263 (336)
T ss_dssp ------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred C----------------------CCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 6----------------------540221785455802008999889998908999999999999997869989989999
Q ss_pred HHHHHHHCCCCCC-CCCCCCHHHHHHHHHCCCCCCCCCCCCHHCHHHH-------------HCCCCCCCCC
Q ss_conf 9999982799999-9998889899999980204938879973409999-------------8199867998
Q 001865 906 TFANILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI-------------KKHPFFKGVN 962 (1002)
Q Consensus 906 ~~~~i~~~~~~~~-~~~~~s~~l~~LL~~mL~~dP~~Rpt~~~~a~el-------------L~Hpff~~~~ 962 (1002)
.+..+.....++. .+..++..+.+||.+||.+||.+||| +.|+ |+|||++...
T Consensus 264 ~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----a~el~~~l~~~l~~~~~l~hPw~~~~~ 330 (336)
T 4g3f_A 264 LCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS----AMELRRKVGKALQEVGGLKSPWKGEYK 330 (336)
T ss_dssp CHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred HHHHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHCCC----HHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9999980899800258667999999999976289768959----999999999997544321698767778
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=411.65 Aligned_cols=268 Identities=24% Similarity=0.355 Sum_probs=225.9
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE------C
Q ss_conf 6894223211666938999999917991999999405422485789999999999995799984424789860------8
Q 001865 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~------~ 741 (1002)
.++|++++.||+|+||.||+|.++.+++.||||++.+.. ........+.+|+.+|+.++||||+++++++.. .
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC-CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC
T ss_conf 897489889842608499999998999899999987400-3468899999999999866799954176555203554668
Q ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCC
Q ss_conf 82999996168983567773179999999999999999999999999849431789999589805992999842677545
Q 001865 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~iV~E~~~g~sL~~~l~~~~~~~l~~~~i~~i~~qIl~aL~~LH~~~IiHrDLkP~NIli~~~~~ikL~DFG~a~~~ 821 (1002)
+.+|+||||| +|+|.+++... +.+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~~~ivmE~~-~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 132 KSVYVVLDLM-ESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CCEEEEEECC-SEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred CEEEEEEECC-CCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEC
T ss_conf 8799998379-99889999865--99999999999999999999999886767873713354278887787221434213
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 7898777785123321146999974223566666655468764452000388-888830599999999999909999999
Q 001865 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~ 900 (1002)
..... .......+.+||+.|+|||++.+. .++.++||||+||++|+|++|++||.+
T Consensus 209 ~~~~~-----------------------~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 209 CTSPA-----------------------EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp ------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred CCCCC-----------------------CCCCCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCC
T ss_conf 46754-----------------------5666656625586764878762788899722211168999999978899898
Q ss_pred CCHHHHHHHHHHCCCCCC--------------------C---------CCCCCHHHHHHHHHCCCCCCCCCCCCHHCHHH
Q ss_conf 996899999982799999--------------------9---------99888989999998020493887997340999
Q 001865 901 KTRQKTFANILHKDLKFP--------------------S---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~--------------------~---------~~~~s~~l~~LL~~mL~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..|.......+ . .+..+.++.+||.+||.+||.+||| +.|
T Consensus 266 ~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e 341 (398)
T 4b99_A 266 KNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS----AAA 341 (398)
T ss_dssp SSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC----HHH
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCC----HHH
T ss_conf 8989999999970389986776331002345555307876887889858799999999999977499557918----999
Q ss_pred HHCCCCCCCCCHHHH
Q ss_conf 981998679981133
Q 001865 952 IKKHPFFKGVNWALV 966 (1002)
Q Consensus 952 lL~Hpff~~~~~~~~ 966 (1002)
+|+||||+....+..
T Consensus 342 ~L~Hp~f~~~~~p~~ 356 (398)
T 4b99_A 342 ALRHPFLAKYHDPDD 356 (398)
T ss_dssp HTTSGGGTTTCCGGG
T ss_pred HHCCHHHCCCCCCCC
T ss_conf 965972386889743
Done!