Your job contains 1 sequence.
>001866
MATTKPQRSPEEIEDIILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKDMRLSRDL
MERVLVDRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMI
VSYCRIHLANPDFFGSNNDNNYEINNSNNKSSISPLLPFIFAEVGGGIDGFGNSTSSGSQ
CPPGFLKEFFEEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVGVK
SLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRP
ADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHIQVEPL
SCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTALHASSEEVS
EWINKGNPAKADGSKHFSDGENQLLQSQEATSSSGGASEPSLPAGRPASIGGGKSKYPFI
CECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLEITRIEK
EIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVGGFKMPLPDTCPMEFACMP
EHFVEDAMELLIFASRIPKALDGVLLDDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWM
PRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEY
LWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAE
WERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASM
LNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGR
SYNEQLFSAAADVLWKIGEDGRIIQEFIELGAKAKAAASEAMDAEAALGDIPDEFLDPIQ
VCFTCLLSSLVRTVLRTMVIVSFVAVHFDEGSGHFTFVKNHS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001866
(1002 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2180862 - symbol:AT5G15400 species:3702 "Arabi... 3749 0. 1
DICTYBASE|DDB_G0292264 - symbol:nosA "U box domain-contai... 714 3.8e-104 3
ASPGD|ASPL0000072757 - symbol:AN10556 species:162425 "Eme... 619 4.7e-85 3
ZFIN|ZDB-GENE-020205-1 - symbol:ube4b "ubiquitination fac... 676 1.9e-79 3
UNIPROTKB|F1NGY1 - symbol:UBE4B "Uncharacterized protein"... 671 1.9e-78 3
UNIPROTKB|O95155 - symbol:UBE4B "Ubiquitin conjugation fa... 678 3.7e-78 3
RGD|1304738 - symbol:Ube4b "ubiquitination factor E4B" sp... 671 9.2e-78 3
POMBASE|SPAC20H4.10 - symbol:ufd2 "ubiquitin-protein liga... 579 2.1e-77 3
UNIPROTKB|J9P2H4 - symbol:UBE4B "Uncharacterized protein"... 674 3.1e-77 3
UNIPROTKB|A6QNS2 - symbol:UBE4B "UBE4B protein" species:9... 675 7.1e-77 3
UNIPROTKB|F1P7I0 - symbol:UBE4B "Uncharacterized protein"... 674 1.1e-76 3
UNIPROTKB|J9P9M3 - symbol:UBE4B "Uncharacterized protein"... 674 1.5e-76 3
UNIPROTKB|F1M8D6 - symbol:Ube4b "Protein Ube4b" species:1... 660 3.2e-76 3
FB|FBgn0032467 - symbol:CG9934 species:7227 "Drosophila m... 567 4.7e-62 3
SGD|S000002349 - symbol:UFD2 "Ubiquitin chain assembly fa... 516 7.4e-61 4
FB|FBgn0028467 - symbol:CG11070 species:7227 "Drosophila ... 569 2.5e-60 4
UNIPROTKB|Q14139 - symbol:UBE4A "Ubiquitin conjugation fa... 559 3.2e-59 4
RGD|1303173 - symbol:Ube4a "ubiquitination factor E4A" sp... 558 5.3e-59 4
UNIPROTKB|F1M9N5 - symbol:Ube4a "Ubiquitin conjugation fa... 558 5.3e-59 4
UNIPROTKB|E2RPU3 - symbol:UBE4A "Uncharacterized protein"... 552 1.8e-58 4
UNIPROTKB|F1SAK7 - symbol:UBE4A "Uncharacterized protein"... 553 3.6e-58 4
UNIPROTKB|A5PKG6 - symbol:UBE4A "Ubiquitin conjugation fa... 558 6.0e-58 3
ZFIN|ZDB-GENE-070410-21 - symbol:ube4a "ubiquitination fa... 529 2.1e-56 3
CGD|CAL0003403 - symbol:orf19.5965 species:5476 "Candida ... 484 1.0e-55 3
UNIPROTKB|B7Z7P0 - symbol:UBE4A "cDNA FLJ51394, highly si... 545 8.9e-52 1
UNIPROTKB|F1M8W6 - symbol:Ube4a "Ubiquitin conjugation fa... 300 1.3e-48 5
UNIPROTKB|E1C6M5 - symbol:CBL "Uncharacterized protein" s... 452 4.9e-47 5
UNIPROTKB|F1NIK2 - symbol:CBL "Uncharacterized protein" s... 449 1.1e-46 5
WB|WBGene00006734 - symbol:ufd-2 species:6239 "Caenorhabd... 425 3.1e-40 2
UNIPROTKB|Q95QB5 - symbol:ufd-2 "Protein UFD-2, isoform b... 425 3.1e-40 2
UNIPROTKB|I3LQG8 - symbol:LOC100737278 "Uncharacterized p... 353 4.2e-31 1
UNIPROTKB|F1RIG2 - symbol:F1RIG2 "Uncharacterized protein... 250 9.1e-29 3
UNIPROTKB|K7ERA7 - symbol:UBE4B "Ubiquitin conjugation fa... 185 3.9e-13 1
UNIPROTKB|K7EP75 - symbol:UBE4B "Ubiquitin conjugation fa... 132 4.5e-07 2
>TAIR|locus:2180862 [details] [associations]
symbol:AT5G15400 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 EMBL:AL391143 GO:GO:0034450
eggNOG:COG5113 KO:K10597 EMBL:BX832575 IPI:IPI00523200 PIR:T51518
RefSeq:NP_568313.2 UniGene:At.31807 HSSP:Q14139
ProteinModelPortal:Q9LF41 SMR:Q9LF41 PaxDb:Q9LF41 PRIDE:Q9LF41
ProMEX:Q9LF41 EnsemblPlants:AT5G15400.1 GeneID:831392
KEGG:ath:AT5G15400 TAIR:At5g15400 HOGENOM:HOG000240160
InParanoid:Q9LF41 OMA:CFFLTLT PhylomeDB:Q9LF41
ProtClustDB:CLSN2681049 Genevestigator:Q9LF41 Uniprot:Q9LF41
Length = 1038
Score = 3749 (1324.8 bits), Expect = 0., P = 0.
Identities = 740/1002 (73%), Positives = 831/1002 (82%)
Query: 1 MATTKPQRSPEEIEDIILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKDMRLSRDL 60
MAT+KPQRSP EIEDIILRKIF VTL E+T D+DPRI YLE+TAAE+LSEGK++ LSRDL
Sbjct: 1 MATSKPQRSPAEIEDIILRKIFYVTLTEST-DSDPRIVYLEMTAAEILSEGKELLLSRDL 59
Query: 61 MERVLVDRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMI 120
MERVL+DRLSG+F AEPPF YLI C+RRA+DE KKI +MKDKNLRSE+E V KQAKK+
Sbjct: 60 MERVLIDRLSGDFSDAEPPFPYLIGCHRRAYDESKKIQSMKDKNLRSEMEIVTKQAKKLA 119
Query: 121 VSYCRIHLANPDFFGXXXXXXXXXXXXXXXXXXXPLLPFIFAEVGGG-IDGFGNSTSSGS 179
VSYCRIHL NPD FG P+LP IFAEVG G +D FG S SSG
Sbjct: 120 VSYCRIHLGNPDMFGNSDKPSGGLDNRLKKRNVSPVLPLIFAEVGSGSLDMFGAS-SSGV 178
Query: 180 QCPPGFLKEFFEEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVGV 239
Q PPGFL EFF+++DFD+LD ILK LYE+LR +V+NVS LG+FQ PLRAL YLVS PVG
Sbjct: 179 QAPPGFLDEFFKDSDFDSLDSILKELYEDLRSTVINVSVLGDFQPPLRALKYLVSLPVGA 238
Query: 240 KSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRR 299
KSLV+H+WW+P+ Y+NGR +E+TSILGPFFH+SALPD+ +FKSQPDVGQQCFSEAS RR
Sbjct: 239 KSLVSHEWWVPRGAYMNGRAMELTSILGPFFHISALPDNTLFKSQPDVGQQCFSEASERR 298
Query: 300 PADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHIQVEP 359
PADLLSSF+TIK M LY L DVL+ LLK+TDTRE VL++LAEVIN N+SRAHIQV+P
Sbjct: 299 PADLLSSFSTIKNFMNILYSGLHDVLMILLKSTDTRERVLQFLAEVINANASRAHIQVDP 358
Query: 360 LSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTALHASSEEV 419
+SCASSGMFVNLSAVMLRLC+PFLD +LTKRDKIDPKY F RL L LTALHASSEEV
Sbjct: 359 VSCASSGMFVNLSAVMLRLCEPFLDPHLTKRDKIDPKYAFCGHRLKLSDLTALHASSEEV 418
Query: 420 SEWINKGNPAKADGSKHFSDGENQLLQSQEATSSSGGASEPSLPAGRPASIGGGKSKYPF 479
+EWI K A A+ + + E++LLQS+EATSSS AS G+ A +KY F
Sbjct: 419 TEWIGKDAMANANDAGRENGNESRLLQSKEATSSSSNAS------GQNAK---SATKYTF 469
Query: 480 ICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLEITRIE 539
ICECFFMTARVLNLGLLKA SDFKHL QDISR ED LATLKA + Q PS QL L+I+R+E
Sbjct: 470 ICECFFMTARVLNLGLLKALSDFKHLAQDISRGEDNLATLKAMRDQAPSPQLELDISRME 529
Query: 540 KEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVGGFKMPLPDTCPMEFACM 599
KE+ELSSQEKLC+EAQILRDGD IQ ALSFYRLM+VWLV LVGGFKMPLP TCPMEF+CM
Sbjct: 530 KELELSSQEKLCHEAQILRDGDFIQRALSFYRLMVVWLVGLVGGFKMPLPSTCPMEFSCM 589
Query: 600 PEHFVEDAMELLIFASRIPKALDGVLLDDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCW 659
PEHFVEDAMELLIFASRIPKALDGV LDDFMNFIIMFMASP+Y+RNPYLR+KMVEVLNCW
Sbjct: 590 PEHFVEDAMELLIFASRIPKALDGVPLDDFMNFIIMFMASPEYVRNPYLRAKMVEVLNCW 649
Query: 660 MPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLE 719
MPR S SSSAT+TLFEGHQ+SLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLE
Sbjct: 650 MPRSSSSSSATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLE 709
Query: 720 YLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTA 779
YLWQVPSHRNAWR+IAK+EEKGVYLNFLNFL+NDSIYLLDESLNKILE+K IEA+MSNTA
Sbjct: 710 YLWQVPSHRNAWRRIAKDEEKGVYLNFLNFLVNDSIYLLDESLNKILEIKQIEADMSNTA 769
Query: 780 EWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVAS 839
EWE+RP QERQERTRLFHSQENI+RIDMKLANEDV+MLAFTSE+I APFLLPEM+ERVA+
Sbjct: 770 EWEQRPTQERQERTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERVAN 829
Query: 840 MLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDG 899
MLNYFLLQLVGPQRKSL+LKDPEKYEFRPKQLLKQIV IYV+LARGDT N+FP AISSDG
Sbjct: 830 MLNYFLLQLVGPQRKSLSLKDPEKYEFRPKQLLKQIVRIYVNLARGDTVNIFPGAISSDG 889
Query: 900 RSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPI 959
RSYNEQLF+A ADVL +IGE+GRIIQEF+ELG LG+IPDEFLDPI
Sbjct: 890 RSYNEQLFNAGADVLRRIGEEGRIIQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPI 949
Query: 960 QVCFTCLLSSLVRTVLRTMVIVSFVAVHFDEGSGHFTFVKNH 1001
Q +T + ++ R V + H H F + H
Sbjct: 950 Q--YTLMRDPVILPSSRITVDRPIIQRHL-LSDNHDPFNRAH 988
>DICTYBASE|DDB_G0292264 [details] [associations]
symbol:nosA "U box domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 dictyBase:DDB_G0292264 GenomeReviews:CM000155_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:AAFI02000189 GO:GO:0000151 GO:GO:0034450 eggNOG:COG5113
KO:K10597 OMA:NERICKS EMBL:AF044255 PIR:T14576 RefSeq:XP_629703.1
ProteinModelPortal:O44007 EnsemblProtists:DDB0216192 GeneID:8628617
KEGG:ddi:DDB_G0292264 InParanoid:O44007 ProtClustDB:CLSZ2728734
Uniprot:O44007
Length = 1089
Score = 714 (256.4 bits), Expect = 3.8e-104, Sum P(3) = 3.8e-104
Identities = 159/492 (32%), Positives = 271/492 (55%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHL---VQDISRAEDTLATLKATQGQTPSSQL-NLE 534
FI E FF T R L++G+ + K + +QDI + L K TP +L +
Sbjct: 543 FITETFFSTLRALHIGINSTYEKLKLIGRNLQDIENNKRVLLDSKIKWQNTPQGRLFEGQ 602
Query: 535 ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG--GFKMPLPDTC 592
+ + K+ ++ +AQ+ + +Q SF W++ ++ +PLP
Sbjct: 603 LDLLTKKEDMLKGITYTIDAQLF-EPTFLQKTASFLLFATNWILKVINPKNTPLPLPLPA 661
Query: 593 PMEFACMPEHFVEDAMELLIFA-SRIPKALDGVLLDDFMNFIIMFMASPKYIRNPYLRSK 651
P +FA +PE +ED ++ F + + L + L+ M F I +A+P+Y++NPYL++K
Sbjct: 662 PPQFAALPEFCIEDIVDFFTFVITNFSQVLQYIKLEQLMKFFITILATPEYVKNPYLKAK 721
Query: 652 MVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIR 711
++E+++ ++P S S L E +Q +++V L++ YVDIEFTG H QFY+KF+ R
Sbjct: 722 IIEIISQFVP--SKYSKGNPILLECNQDVKDHMVLALMRFYVDIEFTGGHNQFYEKFSYR 779
Query: 712 HNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVI 771
H + +L+YLW +P R + + K+ +++ F+N LINDSIY+LDE+L K+ ++K
Sbjct: 780 HYSSLILKYLWSIPDFRKKFTETPKDP---IFIKFINMLINDSIYVLDEALAKLAKIKEN 836
Query: 772 EAEMSNTAEWERR-PAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQ--IVAPF 828
+ + + W++ ++R+E+ E I + ++ LAN ++ M+ F S I++ F
Sbjct: 837 QT-LFDDPNWDKDLTPEQRKEKIEQNDLNERICKSNLSLANSNIDMMLFLSSDKTIISGF 895
Query: 829 LLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQ 888
+ PE+I+R+++M+NYFL +VGP+ +L +++PEKY F PK LL Q+ IYV+ R D +
Sbjct: 896 MRPELIDRISAMMNYFLALIVGPKCTNLKVREPEKYHFNPKVLLNQLTEIYVNFGR-DPR 954
Query: 889 NLFPAAISSDGRSYNEQLFSAAADVLWKIG-EDGRIIQEFIELGXXXXXXXXXXXXXXXX 947
F ++ DGRS+ LF +L + ++ + EF +L
Sbjct: 955 --FLQSVVRDGRSFKNSLFQTCEKILQRERLKNDHELDEFSKLVIKLEQVAKEEEQAEED 1012
Query: 948 LGDIPDEFLDPI 959
LGDIPDEF DPI
Sbjct: 1013 LGDIPDEFCDPI 1024
Score = 254 (94.5 bits), Expect = 3.8e-104, Sum P(3) = 3.8e-104
Identities = 72/248 (29%), Positives = 117/248 (47%)
Query: 185 FLKEFFEEADFDTLDPILKGLYENLRGSVLNVSAL-GNFQQPLRALLYLVSFPVGVKSLV 243
F+ +F E D L PI + ++ +L +L+ + L GN + LV F +V
Sbjct: 299 FIFKFLSEYQED-LTPIFEPIFLDLI-KILSTTTLTGNVFPYYKVFSRLVQFKAVSDLVV 356
Query: 244 NHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADL 303
Q W S NG+ +E +ILG F S+ D +Q FS AST +
Sbjct: 357 TLQCW--NSPNFNGKEMERNTILGSLFSPSSASDDG------STIKQYFSNASTMNKNTI 408
Query: 304 LSSFTTIKTVMRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLSC 362
+F +I+ + ++ L D+L LK + +E L +LA + +N R +QV+
Sbjct: 409 GDAFISIRQIQMNIHNGLVDLLKGFLKVQQENKEAFLSWLASAVEKNLERNKLQVDRTKA 468
Query: 363 ASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTALHASSEEVSEW 422
S G +NL AV++ LC+ F+D + +K +D ++ R D+ T L A+SEE +W
Sbjct: 469 CSDGFALNLCAVLVLLCEAFVDIDCSKVSMVDTNFLLSGKRHDITKDTRLCATSEEADQW 528
Query: 423 INKGNPAK 430
+ G K
Sbjct: 529 VKDGTIEK 536
Score = 113 (44.8 bits), Expect = 3.8e-104, Sum P(3) = 3.8e-104
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 17 ILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKD--MRLSRDLMERVLVDRLSGNFP 74
+L KIFL+ L + + + YL ++ E KD ++L + +++R+LV+RLS
Sbjct: 160 VLEKIFLIYL-QPNNNLPEKSIYLPSVNEQIKEEIKDGQLKLDKPVLDRILVERLSTKVQ 218
Query: 75 AAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIHLANPDFF 134
P YLI+C+ R +KK + + + ++K + ++++ Y + L PD F
Sbjct: 219 GV-PAVEYLISCFNRIQQTIKK-------KMAID-QQILKDSTELVLLYFGLVLTIPDMF 269
>ASPGD|ASPL0000072757 [details] [associations]
symbol:AN10556 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:BN001303 GO:GO:0000151 GO:GO:0034450 OMA:CFFLTLT
EnsemblFungi:CADANIAT00006010 Uniprot:C8V8J9
Length = 1095
Score = 619 (223.0 bits), Expect = 4.7e-85, Sum P(3) = 4.7e-85
Identities = 157/499 (31%), Positives = 262/499 (52%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPS--SQLNL--- 533
FI E FF+TA + G S L +D+ E TL L+A + + + +QL L
Sbjct: 525 FITEIFFLTAAAHHYGSESLTSKLDTLERDLKHMETTLVKLEAERPKWSNYPAQLRLFEI 584
Query: 534 EITRIEKEIELSSQEKLCYEAQ-ILRDGDLIQHALSFYRLMIVWLVDLVGG--FK----- 585
++ R + ++++ K Y Q +L D +++F R ++VWL+ + G F
Sbjct: 585 QLKRFKDKLDMGLALK--YSLQGVLFDDQWQFRSMTFMRYVVVWLLRVASGKNFPKEQLV 642
Query: 586 MPLPDTCPMEFACMPEHFVEDAMELLIFASR-IPKALDGVLLDDFMNFIIMFMASPKYIR 644
+PLP+ P F C+PE+FV+D + F +P+ + D+ + I F+ +YI+
Sbjct: 643 LPLPEQPPEVFKCLPEYFVDDIVSNFKFIMWCMPQIITATQGDELVMMCIAFLECSEYIK 702
Query: 645 NPYLRSKMVEVL--NCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHT 702
NPYL++ +V +L W PR G++ L + EYL+ + Y+ E TG+HT
Sbjct: 703 NPYLKAGLVSILYRGTW-PRPGGATGVLVDLLNSMPFANEYLLHACMNFYIQAEHTGAHT 761
Query: 703 QFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESL 762
QFYDKFNIR+ I ++++ +W +R AK ++ F+N L+ND Y+LDES
Sbjct: 762 QFYDKFNIRYEIFQIIKCVWPNTLYRAKLLNQAKHH-LDFFVQFVNLLLNDVTYVLDESF 820
Query: 763 NKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSE 822
+ + E+ N PA +++ R+ +Q + + M+L NE V+ML +E
Sbjct: 821 GSFKTIYNTQLELRNEGA-SMDPAVRQEKEERVAQAQRSA-KSYMQLTNETVAMLKLFTE 878
Query: 823 QIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHL 882
+ F +PE+++R+A ML+Y L +VGP+ +L +++ +Y FRP+ LL +IV +Y++L
Sbjct: 879 ALADSFTMPEIVQRLADMLDYNLDAMVGPKSSNLRVENLHEYGFRPRALLSEIVDVYLNL 938
Query: 883 ARGDTQNLFPAAISSDGRSYNEQLFSAAADVL--WKIGEDGRIIQEFIELGXXXXXXXXX 940
G QN F A++ DGRSY F AA++L W + + ++ + +L
Sbjct: 939 M-GK-QN-FIVAVARDGRSYKPANFEKAAEILRKWNL-KSPEELKRWDQLQLKVKEAKES 994
Query: 941 XXXXXXXLGDIPDEFLDPI 959
LG+IPDEFLDP+
Sbjct: 995 DDQAEEDLGEIPDEFLDPL 1013
Score = 227 (85.0 bits), Expect = 4.7e-85, Sum P(3) = 4.7e-85
Identities = 72/265 (27%), Positives = 128/265 (48%)
Query: 185 FLKEFFEEADFD-TLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF---PVGVK 240
FL E + + D T+ P E L L+ + + +P Y+ SF P ++
Sbjct: 279 FLSEAVKRFEEDETIKPAFIAAVEELSRE-LSSMGINDDYKP-----YVTSFSQLPQALR 332
Query: 241 SLVNHQWWIP----KSVYLNGR---VIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFS 293
+LV H S++ + R E ++LGP+F +S L Q D FS
Sbjct: 333 NLVRHSAIASAITESSIFNHTRDPASFEKETLLGPWFRLSPL--------QGDATMSFFS 384
Query: 294 EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSR 352
+R +L++ +I+ V L D+ D++ +++ + + R +L++ A +N N R
Sbjct: 385 APKSRDQGYILNAQRSIRMVQELLSSDILDIINHMVRASAEARNRILDWFAAALNINHKR 444
Query: 353 AHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTAL 412
+QV+P + +S G NL+ + LC PF+DAN TK D+ID +Y+ + R+D+R T +
Sbjct: 445 RAMQVDPATVSSDGFMFNLTTCLDHLCQPFMDANFTKIDRIDIEYLHRNPRVDMRDETKI 504
Query: 413 HASSEEVSEWINKGNPAKADGSKHF 437
+A + K K++G+ +F
Sbjct: 505 NADQHASDAFYAK----KSEGTSNF 525
Score = 122 (48.0 bits), Expect = 4.7e-85, Sum P(3) = 4.7e-85
Identities = 38/133 (28%), Positives = 69/133 (51%)
Query: 5 KPQRSPEEIEDIILRKIFLVTLNEATT-DAD-PRIAYLELTAAELLSEGKDMRLSRDLME 62
K + + E ED L +F +TL+E+ D R+ +L +EL + +R+S +++
Sbjct: 125 KQEDTLEAFEDRTLSAVFKLTLDESRQRDIHGQRLTFLSGLRSELEDQNLSLRISTAVLD 184
Query: 63 RVLVDRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVS 122
+ L++ S P +P YL+ C++R L K G K +N + E V+ +A+++ +S
Sbjct: 185 QALLEAASSQ-PDGKP-LDYLLPCWKRV-TRLHK-GFRKARNNDPKFE-VICEARRLCMS 239
Query: 123 YCRIHLANPDFFG 135
Y L P+ FG
Sbjct: 240 YAAFALTMPEMFG 252
>ZFIN|ZDB-GENE-020205-1 [details] [associations]
symbol:ube4b "ubiquitination factor E4B, UFD2 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
ZFIN:ZDB-GENE-020205-1 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:BX571850 IPI:IPI00996876
Ensembl:ENSDART00000126384 ArrayExpress:E7FEA3 Bgee:E7FEA3
Uniprot:E7FEA3
Length = 1362
Score = 676 (243.0 bits), Expect = 1.9e-79, Sum P(3) = 1.9e-79
Identities = 163/495 (32%), Positives = 264/495 (53%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAED-TLATLKATQGQTPSSQL--- 531
K+P ECFF+T +L +L + ++ I T+ LK ++ Q S L
Sbjct: 811 KFP--TECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNSRTVEELKNSENQWKDSPLAGR 868
Query: 532 NLE-ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG-GF---KM 586
+ E + R + +++ + K C +A +L D +L++ L F+ ++I ++ +V F +
Sbjct: 869 HREMLKRCKTQLKKLVRSKACADAGLL-DENLLRRCLQFFSMVIQLILRMVEPAFPHVSL 927
Query: 587 PLPDTCPMEFACMPEHFVEDAMELLIFASR-IPKALDGVLLDDFMNFIIMFMASPKYIRN 645
PL P FA +PE ++ED E ++F + P+ L +D + F+I+F+ S YI+N
Sbjct: 928 PLNPEIPKSFAALPEFYIEDVAEFMLFIVQYFPQVLYEPCTEDIVTFLIVFICSQNYIKN 987
Query: 646 PYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFY 705
PYL +K+VEVL P + + E H +S+ LV L+K Y D+E TG+ ++FY
Sbjct: 988 PYLIAKLVEVLFVTNPAVQPRTQRFFEMLENHPLSVNQLVPALMKFYTDVEHTGATSEFY 1047
Query: 706 DKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKI 765
DKF IR++I+ + + LWQ +H+ + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 1048 DKFTIRYHISTIFKSLWQNINHQGTFLEEFNSGKQ--FVRYINMLINDTTFLLDESLESL 1105
Query: 766 LELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIV 825
+ I+ EM N +W+ P +++Q R E + R + LA E V M ++Q+
Sbjct: 1106 KRIHEIQEEMKNKEQWDLLPREQQQSRQSQLTQDERVSRSYLALATETVDMFHILTKQVQ 1165
Query: 826 APFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARG 885
PFL PE+ R+A+MLNY L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L
Sbjct: 1166 KPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL--- 1222
Query: 886 DTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXX 944
D F AI+ D RSY+ +LF + K G I I++F L
Sbjct: 1223 DCPR-FAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQS 1281
Query: 945 XXXLGDIPDEFLDPI 959
D PDEF DP+
Sbjct: 1282 EMDYSDAPDEFKDPL 1296
Score = 181 (68.8 bits), Expect = 1.9e-79, Sum P(3) = 1.9e-79
Identities = 70/256 (27%), Positives = 115/256 (44%)
Query: 182 PPGFLKEFFE--EADFDTLDPILKGLYENLRGSVLNVSA-LGNFQQPLRALLYLVSFPVG 238
P GF++E + D I + + L +V S NF+ PL AL L G
Sbjct: 557 PYGFIQELVRMTHQEEDVFKQIFVPILQGLALAVKECSFDSDNFKFPLMALAELCEIKFG 616
Query: 239 ----VKSLVNH-QWWIPKSVYLN-GRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCF 292
V +L+ W P + GR I+ S LG FF +S + VG + F
Sbjct: 617 KTHPVCNLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLSVFAE-----DDTKVGDKYF 671
Query: 293 S-EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSS 351
S A T ++S +++ + DL +L +L N +TRE L Y+A ++NRN
Sbjct: 672 SGPAITMENTRVVSQ--SLQHYLESARGDLFKILHNILLNGETREAALSYMAALVNRNVK 729
Query: 352 RAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDLR-SL 409
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ RL++
Sbjct: 730 KAQMQTDDKLVSTDGFMMNFLWVLQQL------SMKIKLETVDPLYIFHPKCRLNVSPEE 783
Query: 410 TALHASSEEVSEWINK 425
T L A+ EE+ W+ +
Sbjct: 784 TRLKATMEELKSWLTE 799
Score = 53 (23.7 bits), Expect = 1.9e-79, Sum P(3) = 1.9e-79
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 1 MATTKPQRSPEEIEDIILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKDMRLS-RD 59
+A +P+ E++ L+ I + L + + D + +L AAE KD+ +D
Sbjct: 153 LAEKDSSSNPDVSEELALQLICKI-LRVSWKEQDRDVIFLPSLAAEFQKNPKDVYSDFKD 211
Query: 60 LMERVLVDRL 69
L+ ++L++ L
Sbjct: 212 LIGQILMEAL 221
Score = 41 (19.5 bits), Expect = 9.0e-65, Sum P(3) = 9.0e-65
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 269 FFHVSALPDHAIFKSQPDVGQQCFS 293
FF +S LP + + Q + G++ FS
Sbjct: 427 FFALSDLPQDSSDEEQEEEGEEDFS 451
Score = 39 (18.8 bits), Expect = 1.5e-64, Sum P(3) = 1.5e-64
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 453 SSGGASEPSLPAGRPASI 470
SS S PS+P PA++
Sbjct: 292 SSARLSAPSVPPASPAAL 309
>UNIPROTKB|F1NGY1 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0034976
"response to endoplasmic reticulum stress" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000209 GO:GO:0000151 GO:GO:0034976 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:TCKETEM EMBL:AADN02040784
IPI:IPI00594565 Ensembl:ENSGALT00000004175 Uniprot:F1NGY1
Length = 1182
Score = 671 (241.3 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 164/522 (31%), Positives = 270/522 (51%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 631 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 688
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D + ++ L+FY ++I ++ ++ K+P
Sbjct: 689 REMLKRCKTQLKKLVRCKACADAGLL-DENFLRRCLNFYGMVIQLMLRILDPAYPNIKLP 747
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+ L D + F+++ + + YIRNP
Sbjct: 748 LTLEVPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNP 807
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYD 706
YL +K+VEV+ P + + E H +S + LV +L+K Y D+E TG+ ++FYD
Sbjct: 808 YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD 867
Query: 707 KFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKIL 766
KF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 868 KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLK 925
Query: 767 ELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ ++ EM N +W+ P ++Q R E + R + LA E V M ++Q+
Sbjct: 926 RIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQK 985
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L D
Sbjct: 986 PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL---D 1042
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXX 945
F AI+ D RSY+++LF + K G I I++F L
Sbjct: 1043 CAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAE 1101
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D PDEF DP+ L++ VR T++ S + H
Sbjct: 1102 IDYSDAPDEFRDPLM---DTLMTDPVRLPSGTIMDRSIILRH 1140
Score = 187 (70.9 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 74/257 (28%), Positives = 123/257 (47%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL + L+ NF+ PL AL L
Sbjct: 377 PFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASKECSLDSD---NFKYPLMALCELCEI 433
Query: 236 PVG----VKSLV-NHQWWIPKSVYLN-GRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G + SLV + W+PKS+ GR ++ S LG FF +S + V +
Sbjct: 434 KFGKTHPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAE-----DDNKVVE 488
Query: 290 QCFS-EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINR 348
+ FS A T ++S +++ + ++L +L ++L N +TRE L Y+A V+N
Sbjct: 489 KYFSGPAITLENTRVVSQ--SLQHYLELARQELFKILHSILLNGETREAALSYMAAVVNA 546
Query: 349 NSSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDLR 407
N +A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+DL
Sbjct: 547 NMKKAQMQTDDRLVSTDGFMLNFLWVLQQL------SMKIKLETVDPMYIFHPRCRIDLP 600
Query: 408 S-LTALHASSEEVSEWI 423
+ T + A+ E+V+ WI
Sbjct: 601 TDETRVKATMEDVTAWI 617
Score = 38 (18.4 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E +K M + S+L
Sbjct: 308 YLIECFDRVGIEERKAPKMCSQPTVSQL 335
Score = 38 (18.4 bits), Expect = 9.5e-63, Sum P(2) = 9.5e-63
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 497 KAFSDFKHLVQDI----------SRAEDTLATLKAT 522
+ FSDFK L+ I SR E+ A+L AT
Sbjct: 201 EVFSDFKDLIGQILMEVLMMSTQSRDENPFASLTAT 236
>UNIPROTKB|O95155 [details] [associations]
symbol:UBE4B "Ubiquitin conjugation factor E4 B"
species:9606 "Homo sapiens" [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0009411 "response to UV" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=TAS] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
EMBL:AF043117 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 GO:GO:0019899 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031175 GO:GO:0000209 GO:GO:0000151 GO:GO:0042787
GO:GO:0034976 GO:GO:0034450 eggNOG:COG5113 GO:GO:0003222
EMBL:AL590639 PDB:3L1Z PDBsum:3L1Z EMBL:AB028839 EMBL:AF331520
EMBL:AB014584 EMBL:AL096841 EMBL:BC093696 EMBL:AF091093
IPI:IPI00005715 IPI:IPI00555735 IPI:IPI00655534 PIR:T00358
RefSeq:NP_001099032.1 RefSeq:NP_006039.2 UniGene:Hs.593974 PDB:2KRE
PDB:3L1X PDBsum:2KRE PDBsum:3L1X ProteinModelPortal:O95155
SMR:O95155 DIP:DIP-40309N IntAct:O95155 MINT:MINT-2798575
STRING:O95155 PhosphoSite:O95155 PaxDb:O95155 PRIDE:O95155
Ensembl:ENST00000253251 Ensembl:ENST00000343090
Ensembl:ENST00000377157 GeneID:10277 KEGG:hsa:10277 UCSC:uc001aqr.4
UCSC:uc001aqs.4 CTD:10277 GeneCards:GC01P010092 HGNC:HGNC:12500
HPA:HPA019219 MIM:613565 neXtProt:NX_O95155 PharmGKB:PA37148
HOGENOM:HOG000294109 HOVERGEN:HBG058129 InParanoid:O95155 KO:K10597
OMA:TCKETEM ChiTaRS:UBE4B EvolutionaryTrace:O95155 GenomeRNAi:10277
NextBio:38932 PMAP-CutDB:O95155 ArrayExpress:O95155 Bgee:O95155
CleanEx:HS_UBE4B Genevestigator:O95155 GermOnline:ENSG00000130939
Uniprot:O95155
Length = 1302
Score = 678 (243.7 bits), Expect = 3.7e-78, Sum P(3) = 3.7e-78
Identities = 166/522 (31%), Positives = 270/522 (51%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 752 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 809
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D ++ L+FY L+I L+ ++ +P
Sbjct: 810 REMLKRCKTQLKKLVRCKACADAGLL-DESFLRRCLNFYGLLIQLLLRILDPAYPDITLP 868
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+AL D + F+++ + + YIRNP
Sbjct: 869 LNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNP 928
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYD 706
YL +K+VEV+ P + + E H +S + LV +L+K Y D+E TG+ ++FYD
Sbjct: 929 YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD 988
Query: 707 KFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKIL 766
KF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 989 KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLK 1046
Query: 767 ELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+
Sbjct: 1047 RIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQK 1106
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L D
Sbjct: 1107 PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL---D 1163
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXX 945
F AI+ D RSY+++LF + K G I I++F L
Sbjct: 1164 CAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAE 1222
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D PDEF DP+ L++ VR T++ S + H
Sbjct: 1223 IDYSDAPDEFRDPLM---DTLMTDPVRLPSGTIMDRSIILRH 1261
Score = 176 (67.0 bits), Expect = 3.7e-78, Sum P(3) = 3.7e-78
Identities = 70/258 (27%), Positives = 121/258 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 498 PYGFIQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 554
Query: 236 PVG----VKSLV-NHQWWIPKSVYLN-GRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + + W+PKS+ GR ++ S LG FF S + + +
Sbjct: 555 KFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVEKYFSG 614
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 615 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALSYMAAVVNAN 668
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 669 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 722
Query: 408 SLTALHASSEEVSEWINK 425
T ++A+ E+V++W+ +
Sbjct: 723 DETRVNATMEDVNDWLTE 740
Score = 45 (20.9 bits), Expect = 4.3e-64, Sum P(2) = 4.3e-64
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 408 SLTALHASSEEV--SEW--INKGNPAKADGSKHFSD--GENQLLQSQEATSSSGGASEPS 461
SL++L+ SS S W + P+ A S+ S + L A S + S+PS
Sbjct: 267 SLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPS 326
Query: 462 LPAGRPASI 470
P RP ++
Sbjct: 327 SPRYRPYTV 335
Score = 41 (19.5 bits), Expect = 3.7e-78, Sum P(3) = 3.7e-78
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 429 YLIECFDRVGIEEKKAPKMCSQPAVSQL 456
>RGD|1304738 [details] [associations]
symbol:Ube4b "ubiquitination factor E4B" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0003222
"ventricular trabecula myocardium morphogenesis" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0009411 "response
to UV" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA;ISO] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=ISO] [GO:0044257 "cellular protein catabolic
process" evidence=ISO] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 RGD:1304738
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 GeneTree:ENSGT00390000009300 IPI:IPI00359635
PRIDE:F1M8V2 Ensembl:ENSRNOT00000055572 ArrayExpress:F1M8V2
Uniprot:F1M8V2
Length = 1172
Score = 671 (241.3 bits), Expect = 9.2e-78, Sum P(3) = 9.2e-78
Identities = 164/522 (31%), Positives = 269/522 (51%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 622 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 679
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D ++ L+FY L+I ++ ++ +P
Sbjct: 680 REMLKRCKTQLKKLVRCKACADAGLL-DESFLRRCLNFYGLLIQLMLRVLDPAYPDITLP 738
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+ L D + F+++ + + YIRNP
Sbjct: 739 LNSEVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNP 798
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYD 706
YL +K+VEV+ P + + E H +S + LV +L+K Y D+E TG+ ++FYD
Sbjct: 799 YLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD 858
Query: 707 KFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKIL 766
KF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 859 KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLK 916
Query: 767 ELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+
Sbjct: 917 RIHEVQEEMKNQEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHLLTKQVQK 976
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L D
Sbjct: 977 PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL---D 1033
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXX 945
F AI+ D RSY+++LF + K G I I++F L
Sbjct: 1034 CAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAE 1092
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D PDEF DP+ L++ VR T++ S + H
Sbjct: 1093 IDYSDAPDEFRDPLM---DTLMTDPVRLPSGTIMDRSIILRH 1131
Score = 177 (67.4 bits), Expect = 9.2e-78, Sum P(3) = 9.2e-78
Identities = 70/258 (27%), Positives = 120/258 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL + L+ F+ PL AL L
Sbjct: 368 PYGFIQELVRTTHQDEEVFKQIFIPILQGLARAAKECSLDSDY---FKYPLMALGELCET 424
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G + +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 425 KFGKTHPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 484
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A ++N N
Sbjct: 485 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALSYMAAIVNAN 538
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +NL V+ +L + K + +DP Y+F+ R+ L
Sbjct: 539 MKKAQMQADDRLVSTDGFMLNLLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 592
Query: 408 SLTALHASSEEVSEWINK 425
T ++A+ E+V+EW+ +
Sbjct: 593 DETRINATMEDVNEWLTE 610
Score = 41 (19.5 bits), Expect = 9.2e-78, Sum P(3) = 9.2e-78
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 299 YLIECFDRVGIEEKKAPKMCSQPAVSQL 326
>POMBASE|SPAC20H4.10 [details] [associations]
symbol:ufd2 "ubiquitin-protein ligase E4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 UniPathway:UPA00143 PomBase:SPAC20H4.10 GO:GO:0005634
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 KO:K10597 EMBL:AF059906 EMBL:AB027791 EMBL:AB032715
PIR:T43725 RefSeq:NP_593630.1 ProteinModelPortal:Q9HE05
MINT:MINT-4785000 STRING:Q9HE05 EnsemblFungi:SPAC20H4.10.1
GeneID:2542023 KEGG:spo:SPAC20H4.10 HOGENOM:HOG000188621
OMA:NERICKS OrthoDB:EOG4MPMZ8 NextBio:20803102 Uniprot:Q9HE05
Length = 1010
Score = 579 (208.9 bits), Expect = 2.1e-77, Sum P(3) = 2.1e-77
Identities = 148/513 (28%), Positives = 255/513 (49%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQ----GQTPSSQLNLE 534
FI + FF+ + G+ F + LVQ I +E L+ Q G +++L +
Sbjct: 450 FISDIFFLNLAFHHYGVNATFKALEQLVQSIRDSEKLKERLETEQQNMSGSFQATRLTAQ 509
Query: 535 ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVGGF-----KMPL- 588
++R+++ ++L CYE + + D + SF + +WL L G KMPL
Sbjct: 510 LSRLDQRLDLDRSFVHCYEIMLTQTSDT-SRSFSFLNFVAIWLSRLADGQSSTYPKMPLS 568
Query: 589 -P--DTCPMEFACMPEHFVEDAMELLIFASRIPKA-LDGVLLDDFMNFIIMFMASPKYIR 644
P + P F C+PE+F+E + ++ + + L L+ F + F+ YI+
Sbjct: 569 LPFNENAPEAFKCLPEYFIETITDYMLSLFKTSSSTLTLHSLEPLCEFCVSFLTQANYIK 628
Query: 645 NPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQF 704
NPYLR+K+ E+L + G S + +++ +L+ L+ Y++IE TG TQF
Sbjct: 629 NPYLRAKLAEILYFGVQTHVGRSELLLDVVRTSKVATRWLLPALMAFYIEIESTGQSTQF 688
Query: 705 YDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV--YLNFLNFLINDSIYLLDESL 762
YDKFNIR I E+ +W+ P++ + ++ +E++ + ++ F+ ++ND+ YLLDE+L
Sbjct: 689 YDKFNIRFYICEVFRTIWKQPAY---FGKLEQEQKTNLPFFVKFVALMLNDATYLLDEAL 745
Query: 763 NKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSE 822
K+ E+ +++ +++ Q QE + E +L NE + ML +
Sbjct: 746 LKLTEIHNLQSLLADAIS-NSNSNQNVQESQSNLAAAERQASTYCQLGNETIFMLKLFTS 804
Query: 823 QIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHL 882
I F E+++R+A+MLNY L L GP+ +L ++DP KY F K LL I +Y++L
Sbjct: 805 SIPKAFCAVEIVDRLAAMLNYNLQALCGPKCSNLKVEDPTKYHFNAKTLLSIIFDVYLNL 864
Query: 883 ARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK----IGEDGRIIQEFIELGXXXXXXX 938
+ F A++ DGRSY++++F A ++ K D I+EF+
Sbjct: 865 CN---EPAFVEAVAHDGRSYSKEIFERATSIMTKHNLKSSFDIEAIKEFVN---RVEAFR 918
Query: 939 XXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLV 971
+GDIPD FLDP+ FT + +V
Sbjct: 919 LQEATEEEDMGDIPDYFLDPLM--FTIMKDPVV 949
Score = 241 (89.9 bits), Expect = 2.1e-77, Sum P(3) = 2.1e-77
Identities = 81/266 (30%), Positives = 136/266 (51%)
Query: 182 PPGFLKEFFEEADFDTLD----PILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF-P 236
P FL EF + + + LD P+L+ L +L+ ++NV + ++ +L LVS P
Sbjct: 209 PLEFLSEFVQRFEHENLDELFIPVLESL--SLKIGLMNVDTVQ--MNVMQIILQLVSLKP 264
Query: 237 VGVKSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEAS 296
+ + L W P + N IE + LG +S+L ++F DV + FS ++
Sbjct: 265 IALL-LPKLPSWNPTN---NAGEIEYKTFLG---RISSL---SVFTQ--DVASRYFSNST 312
Query: 297 TRRPADLLSSFTTIKTVMRGLYKD-LGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAH 354
R ++ SS +++K M Y+D L + L++ +T RE+VL++ A V+N N R
Sbjct: 313 ERSAQNISSSISSLKLTM-STYQDVLFQIFNTLIRTSTSLRESVLDFFAMVVNANHKRQS 371
Query: 355 IQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDLRSLTALHA 414
IQV S +N S V+ RL +PFLD +K D++ +Y + R+D++ T L+A
Sbjct: 372 IQVNHFDITSDACMLNFSHVLSRLSEPFLDIGCSKIDRVQVEYFRRNPRVDIKEETKLNA 431
Query: 415 SSEEVSEWINKGNPAKADGSKHF-SD 439
+ + +K PA +GS +F SD
Sbjct: 432 DQKASESFYSK--PA--EGSNNFISD 453
Score = 78 (32.5 bits), Expect = 2.1e-77, Sum P(3) = 2.1e-77
Identities = 28/109 (25%), Positives = 49/109 (44%)
Query: 26 LNEATTDADPRIAYLELTAAELLSEGKDMRLSRDLMERVLVDRLSGNFPAAEPPFLYLIN 85
LN ++ D YLE +L EG + + + ++ L+ RLS F YL+
Sbjct: 89 LNITLSETDSSKYYLEGFKKDLEEEGSPLLFNENNVDSALLSRLS---TTGNNTFSYLLQ 145
Query: 86 CYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIHLANPDFF 134
+ + K++ KD+N ++ + K ++VSY I + PD F
Sbjct: 146 SWSFLYQYKKRLP--KDENQDFKIH-YLSLLKSLLVSYAGIVVMLPDTF 191
>UNIPROTKB|J9P2H4 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 CTD:10277 KO:K10597 EMBL:AAEX03003938
RefSeq:XP_849824.2 Ensembl:ENSCAFT00000046848 GeneID:479603
KEGG:cfa:479603 Uniprot:J9P2H4
Length = 1173
Score = 674 (242.3 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 165/522 (31%), Positives = 269/522 (51%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 623 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 680
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D ++ L+FY L+I L+ ++ +P
Sbjct: 681 REMLKRCKTQLKKLVRCKACADAGLL-DESFLRRCLNFYGLLIQLLLRILDPAYPDITLP 739
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+ L D + F+++ + + YIRNP
Sbjct: 740 LNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNP 799
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYD 706
YL +K+VEV+ P + + E H +S + LV +L+K Y D+E TG+ ++FYD
Sbjct: 800 YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD 859
Query: 707 KFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKIL 766
KF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 860 KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLK 917
Query: 767 ELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+
Sbjct: 918 RIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQK 977
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L D
Sbjct: 978 PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL---D 1034
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXX 945
F AI+ D RSY+++LF + K G I I++F L
Sbjct: 1035 CAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAE 1093
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D PDEF DP+ L++ VR T++ S + H
Sbjct: 1094 IDYSDAPDEFRDPLM---DTLMTDPVRLPSGTIMDRSIILRH 1132
Score = 168 (64.2 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 369 PYGFMQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 425
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 426 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 485
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 486 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALGYMAAVVNAN 539
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 540 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 593
Query: 408 SLTALHASSEEVSEWI 423
T ++A+ E+V++W+
Sbjct: 594 DETRVNATMEDVNDWL 609
Score = 41 (19.5 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 300 YLIECFDRVGIEEKKAPKMCSQPAVSQL 327
>UNIPROTKB|A6QNS2 [details] [associations]
symbol:UBE4B "UBE4B protein" species:9913 "Bos taurus"
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0031175 GO:GO:0000209 GO:GO:0000151 GO:GO:0034976
GO:GO:0034450 eggNOG:COG5113 GO:GO:0003222
GeneTree:ENSGT00390000009300 CTD:10277 HOGENOM:HOG000294109
HOVERGEN:HBG058129 KO:K10597 OMA:TCKETEM EMBL:DAAA02042992
EMBL:BC148970 IPI:IPI00691225 RefSeq:NP_001095974.1
UniGene:Bt.17976 STRING:A6QNS2 Ensembl:ENSBTAT00000013729
GeneID:520833 KEGG:bta:520833 InParanoid:A6QNS2 OrthoDB:EOG4C87RK
NextBio:20873187 Uniprot:A6QNS2
Length = 1362
Score = 675 (242.7 bits), Expect = 7.1e-77, Sum P(3) = 7.1e-77
Identities = 166/522 (31%), Positives = 269/522 (51%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 812 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 869
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D ++ L+FY L+I L+ L+ +P
Sbjct: 870 REMLKRCKTQLKKLVRCKACADAGLL-DESFLRRCLNFYGLLIQLLLRLLDPAYPDVTLP 928
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+ L D + F+++ + + YIRNP
Sbjct: 929 LNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNP 988
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYD 706
YL +K+VEV+ P + + E H +S + LV +L+K Y D+E TG+ ++FYD
Sbjct: 989 YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD 1048
Query: 707 KFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKIL 766
KF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 1049 KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLK 1106
Query: 767 ELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+
Sbjct: 1107 RIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQK 1166
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L D
Sbjct: 1167 PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL---D 1223
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXX 945
F AI+ D RSY+++LF + K G I I++F L
Sbjct: 1224 CAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAE 1282
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D PDEF DP+ L++ VR T++ S + H
Sbjct: 1283 IDYSDAPDEFRDPLM---DTLMTDPVRLPSGTIMDRSIILRH 1321
Score = 170 (64.9 bits), Expect = 7.1e-77, Sum P(3) = 7.1e-77
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 558 PYGFIQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 614
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 615 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 674
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 675 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALSYMAAVVNAN 728
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 729 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 782
Query: 408 SLTALHASSEEVSEWI 423
T ++A+ E+V++W+
Sbjct: 783 DETRVNATMEDVNDWL 798
Score = 41 (19.5 bits), Expect = 7.1e-77, Sum P(3) = 7.1e-77
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 489 YLIECFDRVGIEEKKAPKMCSQPAVSQL 516
Score = 40 (19.1 bits), Expect = 5.0e-63, Sum P(2) = 5.0e-63
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 452 SSSGGASEPSLPAGRPASIGGGKSKY--PF 479
S+S G S PS RP+S+ S Y PF
Sbjct: 389 SASPGGSAPSR---RPSSLRNSPSMYDSPF 415
>UNIPROTKB|F1P7I0 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:AAEX03003938
Ensembl:ENSCAFT00000031485 Uniprot:F1P7I0
Length = 1312
Score = 674 (242.3 bits), Expect = 1.1e-76, Sum P(3) = 1.1e-76
Identities = 165/522 (31%), Positives = 269/522 (51%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 762 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 819
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D ++ L+FY L+I L+ ++ +P
Sbjct: 820 REMLKRCKTQLKKLVRCKACADAGLL-DESFLRRCLNFYGLLIQLLLRILDPAYPDITLP 878
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+ L D + F+++ + + YIRNP
Sbjct: 879 LNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNP 938
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYD 706
YL +K+VEV+ P + + E H +S + LV +L+K Y D+E TG+ ++FYD
Sbjct: 939 YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD 998
Query: 707 KFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKIL 766
KF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 999 KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLK 1056
Query: 767 ELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+
Sbjct: 1057 RIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQK 1116
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L D
Sbjct: 1117 PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL---D 1173
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXX 945
F AI+ D RSY+++LF + K G I I++F L
Sbjct: 1174 CAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAE 1232
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D PDEF DP+ L++ VR T++ S + H
Sbjct: 1233 IDYSDAPDEFRDPLM---DTLMTDPVRLPSGTIMDRSIILRH 1271
Score = 168 (64.2 bits), Expect = 1.1e-76, Sum P(3) = 1.1e-76
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 508 PYGFMQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 564
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 565 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 624
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 625 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALGYMAAVVNAN 678
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 679 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 732
Query: 408 SLTALHASSEEVSEWI 423
T ++A+ E+V++W+
Sbjct: 733 DETRVNATMEDVNDWL 748
Score = 41 (19.5 bits), Expect = 1.1e-76, Sum P(3) = 1.1e-76
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 439 YLIECFDRVGIEEKKAPKMCSQPAVSQL 466
>UNIPROTKB|J9P9M3 [details] [associations]
symbol:UBE4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:TCKETEM EMBL:AAEX03003938
Ensembl:ENSCAFT00000046404 Uniprot:J9P9M3
Length = 1360
Score = 674 (242.3 bits), Expect = 1.5e-76, Sum P(3) = 1.5e-76
Identities = 165/522 (31%), Positives = 269/522 (51%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 810 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 867
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D ++ L+FY L+I L+ ++ +P
Sbjct: 868 REMLKRCKTQLKKLVRCKACADAGLL-DESFLRRCLNFYGLLIQLLLRILDPAYPDITLP 926
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+ L D + F+++ + + YIRNP
Sbjct: 927 LNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNP 986
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYD 706
YL +K+VEV+ P + + E H +S + LV +L+K Y D+E TG+ ++FYD
Sbjct: 987 YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD 1046
Query: 707 KFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKIL 766
KF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 1047 KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLK 1104
Query: 767 ELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+
Sbjct: 1105 RIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQK 1164
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L D
Sbjct: 1165 PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL---D 1221
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXX 945
F AI+ D RSY+++LF + K G I I++F L
Sbjct: 1222 CAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAE 1280
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D PDEF DP+ L++ VR T++ S + H
Sbjct: 1281 IDYSDAPDEFRDPLM---DTLMTDPVRLPSGTIMDRSIILRH 1319
Score = 168 (64.2 bits), Expect = 1.5e-76, Sum P(3) = 1.5e-76
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 556 PYGFMQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 612
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 613 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 672
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 673 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALGYMAAVVNAN 726
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 727 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 780
Query: 408 SLTALHASSEEVSEWI 423
T ++A+ E+V++W+
Sbjct: 781 DETRVNATMEDVNDWL 796
Score = 41 (19.5 bits), Expect = 1.5e-76, Sum P(3) = 1.5e-76
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 487 YLIECFDRVGIEEKKAPKMCSQPAVSQL 514
Score = 37 (18.1 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 442 NQLLQSQEATSSSGGASEPSLPAGRPASIGGGKSKY--PF 479
+ L Q + A+ PS + RP+S+ S Y PF
Sbjct: 374 SSLRQRPSSLGPPSVAASPSAVSRRPSSLRISPSMYDNPF 413
>UNIPROTKB|F1M8D6 [details] [associations]
symbol:Ube4b "Protein Ube4b" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 RGD:1304738 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0009411 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0031175 GO:GO:0000209 GO:GO:0000151
GO:GO:0034976 GO:GO:0034450 GO:GO:0003222
GeneTree:ENSGT00390000009300 IPI:IPI00958178 PRIDE:F1M8D6
Ensembl:ENSRNOT00000021197 ArrayExpress:F1M8D6 Uniprot:F1M8D6
Length = 1174
Score = 660 (237.4 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 163/522 (31%), Positives = 268/522 (51%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 622 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 679
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D ++ L+FY L+I ++ ++ +P
Sbjct: 680 REMLKRCKTQLKKLVRCKACADAGLL-DESFLRRCLNFYGLLIQLMLRVLDPAYPDITLP 738
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+ L D + F+++ + + YIRNP
Sbjct: 739 LNSEVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNP 798
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYD 706
YL +K+VEV+ P + + E H +S + LV +L+K Y D+E TG+ ++FYD
Sbjct: 799 YLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD 858
Query: 707 KFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKIL 766
KF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL +
Sbjct: 859 KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLK 916
Query: 767 ELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+
Sbjct: 917 RIHEVQEEMKNQEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHLLTKQVQK 976
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L D
Sbjct: 977 PFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL---D 1033
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXX 945
F AI+ D RSY+++LF + K G I I++F L
Sbjct: 1034 CAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAE 1092
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D PDEF + T L++ VR T++ S + H
Sbjct: 1093 IDYSDAPDEFRGKYPLMDT-LMTDPVRLPSGTIMDRSIILRH 1133
Score = 177 (67.4 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 70/258 (27%), Positives = 120/258 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL + L+ F+ PL AL L
Sbjct: 368 PYGFIQELVRTTHQDEEVFKQIFIPILQGLARAAKECSLDSDY---FKYPLMALGELCET 424
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G + +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 425 KFGKTHPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 484
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A ++N N
Sbjct: 485 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALSYMAAIVNAN 538
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +NL V+ +L + K + +DP Y+F+ R+ L
Sbjct: 539 MKKAQMQADDRLVSTDGFMLNLLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 592
Query: 408 SLTALHASSEEVSEWINK 425
T ++A+ E+V+EW+ +
Sbjct: 593 DETRINATMEDVNEWLTE 610
Score = 41 (19.5 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 299 YLIECFDRVGIEEKKAPKMCSQPAVSQL 326
>FB|FBgn0032467 [details] [associations]
symbol:CG9934 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 KO:K10597 FlyBase:FBgn0032467
EMBL:AY094803 RefSeq:NP_001162967.1 RefSeq:NP_609597.1
UniGene:Dm.6565 SMR:Q9VK44 IntAct:Q9VK44 MINT:MINT-1676904
EnsemblMetazoa:FBtr0080428 EnsemblMetazoa:FBtr0301247 GeneID:34699
KEGG:dme:Dmel_CG9934 UCSC:CG9934-RA InParanoid:Q9VK44 OMA:RYANRNN
GenomeRNAi:34699 NextBio:789760 Uniprot:Q9VK44
Length = 1217
Score = 567 (204.7 bits), Expect = 4.7e-62, Sum P(3) = 4.7e-62
Identities = 141/496 (28%), Positives = 256/496 (51%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL----NLE 534
F +C+F+T + +LG L A ++ V+ I + + L T+ +S+ N
Sbjct: 664 FQTQCWFLTLQAHHLGYLPAIQRYRQKVRAIKELQKLIDELDRTKSHWMNSRYANRNNQF 723
Query: 535 ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLV------DLVGGF--KM 586
R EK++ ++ K C E +L G L+Q FY + +++ + G F K+
Sbjct: 724 KERWEKQLRKLNRSKTCCEITLLDPG-LLQRCTEFYSTVCEFMLYQFEGRPIEGPFISKL 782
Query: 587 PLPDTCPME-FACMPEHFVEDAMELLIFASRIPKALDGVLLD-DFMNFIIMFMASPKYIR 644
P+ P + F+ +PE +++D E ++F + +D + +++ + + I+
Sbjct: 783 PVQQLLPTDAFSALPEWYIDDIAEFILFTMQHANMDIRQGIDHSIITWLLTCVCASHLIK 842
Query: 645 NPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQF 704
NPY+ +K+VEV+ + + + +S A ++ H+++ LV +L++ YVD+E TG T+F
Sbjct: 843 NPYVTAKLVEVMFVFSLKPA--NSVNAAMWN-HELAQNALVSSLMRFYVDVETTGQSTEF 899
Query: 705 YDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNK 764
YDKF IR++I+ L + +W+ P HR A I + ++ F+N L+ND+ +LLDE L
Sbjct: 900 YDKFTIRYHISHLFKSMWENPIHRQA--VICESRVGNQFVKFVNMLMNDTTFLLDECLEN 957
Query: 765 ILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQI 824
+ + + +S+ A + A+++Q R + E R + LA E V + + + I
Sbjct: 958 LKRIHQTQQLLSDKANLSKMSAEQQQSRLTQLATDERQCRSYLTLARETVDLFHYLTSDI 1017
Query: 825 VAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLAR 884
PF+ E+++R++SMLN+ L QL GP+ L +K+P KY + P+ LL QI IY+HL
Sbjct: 1018 KEPFMRDELVDRLSSMLNFNLKQLAGPKCNDLKVKNPAKYGWEPRSLLAQIFDIYLHL-- 1075
Query: 885 GDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXX 943
D F A+++D RS++ Q+ + AA + ++ + ++ F L
Sbjct: 1076 -DCDR-FAEALAADERSFDVQICNEAASRIKRLALRSAVEVERFKALTQRAHEIYVTNLQ 1133
Query: 944 XXXXLGDIPDEFLDPI 959
D PDEF DP+
Sbjct: 1134 TEDECADAPDEFKDPL 1149
Score = 151 (58.2 bits), Expect = 4.7e-62, Sum P(3) = 4.7e-62
Identities = 61/237 (25%), Positives = 109/237 (45%)
Query: 195 FDTL-DPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVG----VKSLVNHQ--W 247
FDT+ +L+GL+ ++ ++ S + + QQ + L LV VG + LV+ Q +
Sbjct: 435 FDTIFSQVLRGLFAGMQRNICT-SKI-SVQQ-IEWLSKLVVIKVGSVRPIADLVSRQPNF 491
Query: 248 WIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLSSF 307
P ++GR I S LGPF VS + I K F+E +T+ + SS
Sbjct: 492 LPPICTKISGREIVKCSFLGPFLSVSLFAEENI-K---------FAEFTTKNKLEDASS- 540
Query: 308 TTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHIQVEPLSCASSGM 367
+ ++ + + ++ V +L N +R LEY+A ++ N R + A G
Sbjct: 541 SRLRWELHSMRTNMHVVFHSLCVNASSRPKTLEYIASILRHNDRRVQFASDEKLLARDGF 600
Query: 368 FVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRL-DLRSLTALHASSEEVSEWI 423
+NL +V+ +L K D+I+P + +Y + L ++ T + S EE ++
Sbjct: 601 MINLMSVLQQLSVKI------KLDRIEPNFHYYKNSLVNIEQDTKIRYSEEEYRNFL 651
Score = 43 (20.2 bits), Expect = 4.7e-62, Sum P(3) = 4.7e-62
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 81 LYLINCYRRAHDELKKIGNMKDKNLRSELEAVVK 114
LYLI CY+ E + + L+ E V++
Sbjct: 351 LYLIRCYQNYQTECSRKTPLTQPALQLAFEQVMR 384
Score = 41 (19.5 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 440 GENQLLQSQEATSSSGGASEPSLPAGRPA 468
GE++L++ EAT G E SLP PA
Sbjct: 110 GESRLVR--EATP---GEKEVSLPTSAPA 133
>SGD|S000002349 [details] [associations]
symbol:UFD2 "Ubiquitin chain assembly factor (E4)"
species:4932 "Saccharomyces cerevisiae" [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IMP;IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006950 "response to
stress" evidence=IMP] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 UniPathway:UPA00143 SGD:S000002349 GO:GO:0005634
GO:GO:0005737 GO:GO:0006950 EMBL:BK006938 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 EMBL:X83276 GO:GO:0000151
GO:GO:0034450 eggNOG:COG5113 PDB:3M63 PDBsum:3M63 PDB:3M62
PDBsum:3M62 GeneTree:ENSGT00390000009300 KO:K10597 OMA:CFFLTLT
OrthoDB:EOG4MPMZ8 EMBL:U22154 EMBL:Z74238 PIR:S58787
RefSeq:NP_010091.2 PDB:2QIZ PDB:2QJ0 PDBsum:2QIZ PDBsum:2QJ0
ProteinModelPortal:P54860 SMR:P54860 DIP:DIP-5925N IntAct:P54860
MINT:MINT-680185 STRING:P54860 PaxDb:P54860 PeptideAtlas:P54860
EnsemblFungi:YDL190C GeneID:851337 KEGG:sce:YDL190C CYGD:YDL190c
HOGENOM:HOG000248797 EvolutionaryTrace:P54860 NextBio:968408
Genevestigator:P54860 GermOnline:YDL190C Uniprot:P54860
Length = 961
Score = 516 (186.7 bits), Expect = 7.4e-61, Sum P(4) = 7.4e-61
Identities = 143/489 (29%), Positives = 247/489 (50%)
Query: 516 LATLKATQGQTPSSQLNLEITRIEKEIELSSQEKLCYEAQIL-RDGDLIQHALSFYRLMI 574
L+ ++ T S + L+ + ++L + +C + L R D +H F ++ +
Sbjct: 439 LSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDP-EHEFPFKQIKL 497
Query: 575 VWLVDLVGGFKMPLPDT----CPMEFACMPEHFVEDAMELLIFASRIPKA--LDGVLLDD 628
+ D +G + D P+ F PE VE + ++ S+ + L
Sbjct: 498 PLIPDQIGVENVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGS 557
Query: 629 FMNFIIMFMASPKYIRNPYLRSKMVEVLNCW-MPRRSGSSSATATLFEGHQMSLEYLVRN 687
F+ F M + P+ + NP+L+ K+V++L+ MP S +FE ++ + L+
Sbjct: 558 FVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYA 617
Query: 688 LLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLW-QVPSHRNA--WRQIAKEEEKGVYL 744
LL YV +E TGS +QFYDKFN R++I+ +LE L+ ++PS++N W+ + ++
Sbjct: 618 LLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQS---QNNADFFV 674
Query: 745 NFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWE--RRPAQERQERTRLFHSQENI 802
F+ ++ND +LLDE L+ + E+ I+ E+ N A R ++++ +TRL +
Sbjct: 675 RFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPPTREEEDKELQTRLASASRQA 734
Query: 803 IRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPE 862
+ LA++ + + S+ I A F+ PE++ R+ASMLNY L LVGP+ L +KDP+
Sbjct: 735 -KSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQ 793
Query: 863 KYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGR 922
Y F PK LLK + +Y++L+ Q+ F +A++ D RS+N LF A D+L + + G
Sbjct: 794 SYSFNPKDLLKALTTVYINLSE---QSEFISAVAKDERSFNRNLFVRAVDILGR--KTGL 848
Query: 923 IIQEFIE--LGXXXXXXXXXXXXXXXXL--GDIPDEFLDPIQVCFTCLLSSLVRTVLRTM 978
EFIE L L GD+PDEFLDP+ +T + ++ +
Sbjct: 849 ASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLM--YTIMKDPVILPASKMN 906
Query: 979 VIVSFVAVH 987
+ S + H
Sbjct: 907 IDRSTIKAH 915
Score = 125 (49.1 bits), Expect = 7.4e-61, Sum P(4) = 7.4e-61
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 333 DTRENVLEYLAEVINRNSSRA--HIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKR 390
++R +++ Y A + N+N R H + LS S+G N++ +++R PFLD + K
Sbjct: 277 NSRTDMISYFAHIANKNHLRRADHPPFKELS--SNGFMSNITLLLVRFSQPFLDISYKKI 334
Query: 391 DKIDPKYVFYSSR-LDLRSLTALHASSEEVSEWINKGNPAKADGSKHF-SD 439
DKID Y S +DL T L++ +E + +K N AD +F SD
Sbjct: 335 DKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDK-NRKTADSKPNFISD 384
Score = 81 (33.6 bits), Expect = 7.4e-61, Sum P(4) = 7.4e-61
Identities = 26/106 (24%), Positives = 54/106 (50%)
Query: 28 EATTDADPRIAYLELTAAELLSEGKDMRLSRDLMERVLVDRLSGNFPAAEPPFLYLINCY 87
+ TTD Y L +E + +G + + D ++ +L+ +L+ N + PF YL +C+
Sbjct: 9 QITTDPSDTRGY-SLLKSEEVPQGSTLGV--DFIDTLLLYQLTEN-EKLDKPFEYLNDCF 64
Query: 88 RRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIHLANPDF 133
RR + + K+I K+K L + ++ ++++ Y + L +F
Sbjct: 65 RR-NQQQKRI--TKNKPNAESLHSTFQEIDRLVIGYGVVALQIENF 107
Score = 64 (27.6 bits), Expect = 7.4e-61, Sum P(4) = 7.4e-61
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 475 SKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLK--ATQGQTPSSQLN 532
SK FI +CFF+T L+ GL S + + +I ++ + +K A + +
Sbjct: 377 SKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFIT 436
Query: 533 LEITRIEKEIELSSQEKLCYEAQ 555
+++++EK L + E L + Q
Sbjct: 437 AQLSKMEKA--LKTTESLRFALQ 457
Score = 39 (18.8 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 297 TRRPADLLSSFTTIKT--VMRG--LYKDLGDVLLAL-LKNTDTRENVLEYLAEVINRNSS 351
T P+D ++ +K+ V +G L D D LL L + + EYL + RN
Sbjct: 11 TTDPSDT-RGYSLLKSEEVPQGSTLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQ 69
Query: 352 RAHI 355
+ I
Sbjct: 70 QKRI 73
>FB|FBgn0028467 [details] [associations]
symbol:CG11070 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450 eggNOG:COG5113
GeneTree:ENSGT00390000009300 KO:K10596 OMA:DRDAGEK EMBL:AF181657
RefSeq:NP_609060.1 UniGene:Dm.331 SMR:Q9U4F8
EnsemblMetazoa:FBtr0079297 GeneID:33932 KEGG:dme:Dmel_CG11070
UCSC:CG11070-RA FlyBase:FBgn0028467 InParanoid:Q9U4F8
OrthoDB:EOG495X6S GenomeRNAi:33932 NextBio:785986 Uniprot:Q9U4F8
Length = 993
Score = 569 (205.4 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 134/372 (36%), Positives = 210/372 (56%)
Query: 627 DDFMNFIIMFMASPKYIRNPYLRSKMVEVLNCWMPRR-SGSSSAT--ATLFEGHQMSLEY 683
D F II+FM S ++NP+LR+K+ E L +P R GS T + +F+ H L+
Sbjct: 587 DAFFKMIILFMGSSALVKNPHLRAKLAEALEFLLPSRIMGSHRKTFVSHVFDNHPDRLK- 645
Query: 684 LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKG-- 741
+VR+LL ++V IE TG QF KFN R + ++E+LW P H +R +A E E+
Sbjct: 646 VVRSLLNVFVSIEMTGQSVQFEQKFNYRRPMYAIMEFLWTKPEHVQCFRDLAVEAEQNMD 705
Query: 742 -----VYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQER-TRL 795
++L F+N LIND+I+LLDESL+ + ++K ++ N EWE P ER++ T L
Sbjct: 706 AIEPPIFLRFINLLINDAIFLLDESLSNLEQIKQLQQAQDN-GEWESLPHTEREQHMTNL 764
Query: 796 FHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKS 855
H + R D + + +++L + +I + F M++R+A+MLNYFLL LVGP+++
Sbjct: 765 QHLGM-LARFDNIIGRDTINLLKLLTSKIKSIFCHNSMVDRMAAMLNYFLLNLVGPKKER 823
Query: 856 LTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLW 915
+KD +++EF P Q + +I IY++L+ ++ F A+S DGRSY+EQLFS A ++L
Sbjct: 824 FKVKDKKEFEFDPAQTVIEISHIYINLSSDES---FCLAVSQDGRSYSEQLFSYAENILI 880
Query: 916 KIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVL 975
+IG G++I + E L D P+E+LDPI T + +V
Sbjct: 881 RIG-GGQLIGDMSEFAVKVARMGAQYKEEQELLADAPEEYLDPI--ISTLMTDPVVLPSS 937
Query: 976 RTMVIVSFVAVH 987
+ V S +A H
Sbjct: 938 KVTVDRSTIARH 949
Score = 83 (34.3 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 41/166 (24%), Positives = 77/166 (46%)
Query: 262 MTSILGPFFHVSALPDHAIFKSQPDVGQ-QCFSEASTRRPADLLSSFTTIKTVMRGLYKD 320
M ++LG +S LP K+Q G+ + F E S + + L + + + ++
Sbjct: 247 MDTLLGSLLCISILP-----KTQ--TGKYEFFQELSINQTDEAL--WALLSHHQQSIFL- 296
Query: 321 LGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHI------QVEPL--SCASSGMFVNLS 372
L LL L + +T++ L+++ ++ N R H+ +E S +S NL+
Sbjct: 297 LVKQLLVL--SPETKKKTLQWVGNCLDANVPRGHLWSSINASLEQTAHSTSSDAFMTNLT 354
Query: 373 AVMLRLCDPFLDANLTKRDKIDPKYVFYSSR-LDLRSLTALHASSE 417
AV++RLC P +L K +DP Y ++ + ++ L A +E
Sbjct: 355 AVLVRLCAPLCMPSL-KVLLVDPTYCAVPNKDRQAKGVSMLRAHAE 399
Score = 66 (28.3 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 22/106 (20%), Positives = 47/106 (44%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLEI 535
KY F+ E F+MT + L + F +++++ + +A G+ +S N E+
Sbjct: 416 KYNFVTEIFYMTHKCFELSNIPCIERFVRVLRELQNTQ--MA-----YGEIVNSDPNSEV 468
Query: 536 TR-IEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDL 580
+ + + I Q+ L + L + + L F+ +WL ++
Sbjct: 469 AKNLFRMIRDQIQQVLTIK-NTLAEPTNDMYLLKFFEASAIWLTEI 513
Score = 55 (24.4 bits), Expect = 2.5e-60, Sum P(4) = 2.5e-60
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 17 ILRKIFLVTLNEATTDADPRIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++ ++ L TLN+A++ A L A+++ E + LS DL+ L +RL
Sbjct: 26 LVEEVLLFTLNKASSSA-------VLCLADVVVETSEEMLSEDLVAHALFERL 71
Score = 38 (18.4 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 13/65 (20%), Positives = 26/65 (40%)
Query: 191 EEADFDTLDPILKGLYENLRGSVLNVSALGN-FQQPLRALLYLVSFPVGVKSLVNHQWWI 249
E + D + K L+ +R + V + N +P + YL+ F + +
Sbjct: 458 EIVNSDPNSEVAKNLFRMIRDQIQQVLTIKNTLAEPTNDM-YLLKFFEASAIWLTEIAML 516
Query: 250 PKSVY 254
P+ +Y
Sbjct: 517 PREIY 521
>UNIPROTKB|Q14139 [details] [associations]
symbol:UBE4A "Ubiquitin conjugation factor E4 A"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
GO:GO:0005737 Reactome:REACT_6900 EMBL:CH471065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209 GO:GO:0000151
GO:GO:0034450 eggNOG:COG5113 CTD:9354 HOGENOM:HOG000007049
HOVERGEN:HBG059871 KO:K10596 OMA:DRDAGEK EMBL:D50916 EMBL:EF445042
EMBL:BC052643 EMBL:BC062695 EMBL:BC111417 EMBL:BC112367
IPI:IPI00028957 IPI:IPI00556075 RefSeq:NP_001191006.1
RefSeq:NP_004779.2 UniGene:Hs.602967 UniGene:Hs.75275 PDB:1WGM
PDBsum:1WGM ProteinModelPortal:Q14139 SMR:Q14139 IntAct:Q14139
STRING:Q14139 PhosphoSite:Q14139 DMDM:71164791 PaxDb:Q14139
PRIDE:Q14139 Ensembl:ENST00000252108 Ensembl:ENST00000431736
GeneID:9354 KEGG:hsa:9354 UCSC:uc001psv.3 UCSC:uc001psw.3
GeneCards:GC11P118264 HGNC:HGNC:12499 MIM:603753 neXtProt:NX_Q14139
PharmGKB:PA37147 InParanoid:Q14139 ChiTaRS:UBE4A
EvolutionaryTrace:Q14139 GenomeRNAi:9354 NextBio:35029
PMAP-CutDB:B0YJB6 ArrayExpress:Q14139 Bgee:Q14139 CleanEx:HS_UBE4A
Genevestigator:Q14139 GermOnline:ENSG00000110344 Uniprot:Q14139
Length = 1066
Score = 559 (201.8 bits), Expect = 3.2e-59, Sum P(4) = 3.2e-59
Identities = 158/530 (29%), Positives = 267/530 (50%)
Query: 477 YPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQ-LNLEI 535
Y + E +T L LG + + Q++ R + +A A Q +P++ L +
Sbjct: 504 YNLVTENLALTEYTLYLGFHRLHDQMVKINQNLHRLQ--VAWRDAQQSSSPAADNLREQF 561
Query: 536 TRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVGGFKM--PLPDTCP 593
R+ I LS++ + E Q+L++ +Q +++ + + + ++ PLPD
Sbjct: 562 ERL-MTIYLSTKTAMT-EPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELTFPLPDGYS 619
Query: 594 MEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIRNPYLRS 650
A +PE F ++ + LIF R + L+ ++FI +F S + ++NP+LR+
Sbjct: 620 -SLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIERMKNPHLRA 678
Query: 651 KMVEVLNCWMPRRSGSSSA-TATLFEGHQM--SLEY---LVRNLLKLYVDIEFTGSHTQF 704
K+ EVL MP + + +++F ++ + +Y L L+K++VDIEFTG QF
Sbjct: 679 KLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQLAEALIKVFVDIEFTGDPHQF 738
Query: 705 YDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYL 757
KFN R + +L Y+W ++R + + +A K + +L FLN L+ND+I+L
Sbjct: 739 EQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFL 798
Query: 758 LDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSML 817
LDE++ + ++K+ + E + EW+ + R+E+ + R ++NE + L
Sbjct: 799 LDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTL 857
Query: 818 AFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVC 877
AF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I
Sbjct: 858 AFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICT 917
Query: 878 IYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXX 937
IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 918 IYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIMAFSNLAERIKSL 974
Query: 938 XXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI C +V R V S +A H
Sbjct: 975 ADLQQQEEETYADACDEFLDPIMSTLMC--DPVVLPSSRVTVDRSTIARH 1022
Score = 99 (39.9 bits), Expect = 3.2e-59, Sum P(4) = 3.2e-59
Identities = 53/227 (23%), Positives = 93/227 (40%)
Query: 185 FLKEFFEEADFD----TLDPILKGLYENLRGSVLNVSALGNFQQP-LRALLYLVSFPVGV 239
FL+E E D T ++ +++ L G + ++ L LLY
Sbjct: 248 FLEEVIEALILDEEVRTFPEVMIPVFDILLGRIKDLELCQILLYAYLDILLYFTRQKDMA 307
Query: 240 KSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEAST 297
K V ++ PK NG++ + T +LG +S L K+ P V + F S
Sbjct: 308 KVFV--EYIQPKDP-TNGQMYQKT-LLGVILSISCL-----LKT-PGVVENHGYFLNPSR 357
Query: 298 RRPADLLSSFTTIKTVMRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQ 356
P ++ I M ++ + +L LL+ + +T+ +L +L ++ N+ R I
Sbjct: 358 SSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIW 417
Query: 357 VEPLS------CASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
+ AS F+NL A +L+LC PF ++ +P Y
Sbjct: 418 ANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTY 464
Score = 61 (26.5 bits), Expect = 3.2e-59, Sum P(4) = 3.2e-59
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 50 (22.7 bits), Expect = 3.2e-59, Sum P(4) = 3.2e-59
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 8 RSPEEI-EDI----ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRL 56
RS +EI E + ++++IFL+TL+ + + + P R YLE A EL E +D L
Sbjct: 73 RSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVEL--EDQDW-L 129
Query: 57 SRDLMERVLVDRL 69
+E+ L RL
Sbjct: 130 DMSNVEQALFARL 142
>RGD|1303173 [details] [associations]
symbol:Ube4a "ubiquitination factor E4A" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA;ISO] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
RGD:1303173 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
eggNOG:COG5113 CTD:9354 HOVERGEN:HBG059871 KO:K10596
OrthoDB:EOG4CRKZ8 EMBL:BC061761 IPI:IPI00369411 RefSeq:NP_997493.1
UniGene:Rn.102204 ProteinModelPortal:Q6P7A2 SMR:Q6P7A2
STRING:Q6P7A2 PRIDE:Q6P7A2 GeneID:315608 KEGG:rno:315608
UCSC:RGD:1303173 InParanoid:Q6P7A2 NextBio:669506
ArrayExpress:Q6P7A2 Genevestigator:Q6P7A2
GermOnline:ENSRNOG00000026833 Uniprot:Q6P7A2
Length = 1066
Score = 558 (201.5 bits), Expect = 5.3e-59, Sum P(4) = 5.3e-59
Identities = 162/530 (30%), Positives = 265/530 (50%)
Query: 477 YPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQ-LNLEI 535
Y + E +T L LG + + Q++ R + +A A Q +P++ L +
Sbjct: 504 YNLVTENLALTEYTLYLGFHRLHDQMVKINQNLHRLQ--VAWRDAQQSSSPAADNLREQF 561
Query: 536 TRIEKEIELSSQEKLCYEAQILRDG-DL-IQHALSFYRLMIVWLVDLVGGFKMPLPDTCP 593
R+ I LS++ + E Q+L++ +L + A+ +L I PLPD
Sbjct: 562 ERL-MTIYLSTKTAMT-EPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELSFPLPDGYS 619
Query: 594 MEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIRNPYLRS 650
A +PE F ++ + LIF R + + L+ ++FI +F S + ++NP+LR+
Sbjct: 620 -SLAYVPEFFADNLGDFLIFLRRFAEDILETSADSLEHVLHFITIFTGSIERMKNPHLRA 678
Query: 651 KMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY-----LVRNLLKLYVDIEFTGSHTQF 704
K+ EVL MP + S +++F ++ + L L+K++VDIEFTG QF
Sbjct: 679 KLAEVLEAVMPHLDQTPSPLVSSVFHRKRVFCNFPYAPQLSEALIKVFVDIEFTGDPHQF 738
Query: 705 YDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYL 757
KFN R + +L Y+W S+R + + +A K + +L FLN L+ND+I+L
Sbjct: 739 EQKFNYRRPMYPILRYMWGTDSYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFL 798
Query: 758 LDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSML 817
LDE++ + ++K+ + E + EWE + R+E+ + R ++NE + L
Sbjct: 799 LDEAIQYLSKIKIQQIE-KDRGEWESLTPEARREKEAGLQMFGQLARFHNIMSNETIGTL 857
Query: 818 AFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVC 877
+F + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I
Sbjct: 858 SFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICT 917
Query: 878 IYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXX 937
IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 918 IYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSL 974
Query: 938 XXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI T + +V R V S +A H
Sbjct: 975 ADLQQQEEETYADACDEFLDPIMS--TLMSDPVVLPSSRVTVDGSTIARH 1022
Score = 102 (41.0 bits), Expect = 5.3e-59, Sum P(4) = 5.3e-59
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 321 NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGFFLNPSRSSPQEIKVQEANIHQF 373
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 374 MAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 433
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDL-RSLTALH 413
F+NL A +L+LC PF ++ +P Y D R + ++H
Sbjct: 434 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCVLKDLNDEERKIKSVH 481
Score = 61 (26.5 bits), Expect = 5.3e-59, Sum P(4) = 5.3e-59
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 46 (21.3 bits), Expect = 5.3e-59, Sum P(4) = 5.3e-59
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 17 ILRKIFLVTLNEATTDAD-----P-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + P R YLE A EL E +D L +E+ + RL
Sbjct: 87 MIQRIFLITLDNSDPNLKSGNGIPSRCVYLEEMAVEL--EDQDW-LDMSNVEQAIFARL 142
>UNIPROTKB|F1M9N5 [details] [associations]
symbol:Ube4a "Ubiquitin conjugation factor E4 A"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 RGD:1303173 GO:GO:0005737 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209 GO:GO:0000151
GO:GO:0034450 GeneTree:ENSGT00390000009300 IPI:IPI00369411
PRIDE:F1M9N5 Ensembl:ENSRNOT00000021321 ArrayExpress:F1M9N5
Uniprot:F1M9N5
Length = 1066
Score = 558 (201.5 bits), Expect = 5.3e-59, Sum P(4) = 5.3e-59
Identities = 162/530 (30%), Positives = 265/530 (50%)
Query: 477 YPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQ-LNLEI 535
Y + E +T L LG + + Q++ R + +A A Q +P++ L +
Sbjct: 504 YNLVTENLALTEYTLYLGFHRLHDQMVKINQNLHRLQ--VAWRDAQQSSSPAADNLREQF 561
Query: 536 TRIEKEIELSSQEKLCYEAQILRDG-DL-IQHALSFYRLMIVWLVDLVGGFKMPLPDTCP 593
R+ I LS++ + E Q+L++ +L + A+ +L I PLPD
Sbjct: 562 ERL-MTIYLSTKTAMT-EPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELSFPLPDGYS 619
Query: 594 MEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIRNPYLRS 650
A +PE F ++ + LIF R + + L+ ++FI +F S + ++NP+LR+
Sbjct: 620 -SLAYVPEFFADNLGDFLIFLRRFAEDILETSADSLEHVLHFITIFTGSIERMKNPHLRA 678
Query: 651 KMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY-----LVRNLLKLYVDIEFTGSHTQF 704
K+ EVL MP + S +++F ++ + L L+K++VDIEFTG QF
Sbjct: 679 KLAEVLEAVMPHLDQTPSPLVSSVFHRKRVFCNFPYAPQLSEALIKVFVDIEFTGDPHQF 738
Query: 705 YDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYL 757
KFN R + +L Y+W S+R + + +A K + +L FLN L+ND+I+L
Sbjct: 739 EQKFNYRRPMYPILRYMWGTDSYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFL 798
Query: 758 LDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSML 817
LDE++ + ++K+ + E + EWE + R+E+ + R ++NE + L
Sbjct: 799 LDEAIQYLSKIKIQQIE-KDRGEWESLTPEARREKEAGLQMFGQLARFHNIMSNETIGTL 857
Query: 818 AFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVC 877
+F + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I
Sbjct: 858 SFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICT 917
Query: 878 IYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXX 937
IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 918 IYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSL 974
Query: 938 XXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI T + +V R V S +A H
Sbjct: 975 ADLQQQEEETYADACDEFLDPIMS--TLMSDPVVLPSSRVTVDRSTIARH 1022
Score = 102 (41.0 bits), Expect = 5.3e-59, Sum P(4) = 5.3e-59
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 321 NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGFFLNPSRSSPQEIKVQEANIHQF 373
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 374 MAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 433
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDL-RSLTALH 413
F+NL A +L+LC PF ++ +P Y D R + ++H
Sbjct: 434 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCVLKDLNDEERKIKSVH 481
Score = 61 (26.5 bits), Expect = 5.3e-59, Sum P(4) = 5.3e-59
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 46 (21.3 bits), Expect = 5.3e-59, Sum P(4) = 5.3e-59
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 17 ILRKIFLVTLNEATTDAD-----P-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + P R YLE A EL E +D L +E+ + RL
Sbjct: 87 MIQRIFLITLDNSDPNLKSGNGIPSRCVYLEEMAVEL--EDQDW-LDMSNVEQAIFARL 142
>UNIPROTKB|E2RPU3 [details] [associations]
symbol:UBE4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450 CTD:9354
GeneTree:ENSGT00390000009300 KO:K10596 OMA:DRDAGEK
EMBL:AAEX03003449 RefSeq:XP_850081.1 Ensembl:ENSCAFT00000038039
GeneID:479418 KEGG:cfa:479418 NextBio:20854604 Uniprot:E2RPU3
Length = 1066
Score = 552 (199.4 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 157/530 (29%), Positives = 266/530 (50%)
Query: 477 YPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQ-LNLEI 535
Y + E +T L LG + + Q++ R + +A A Q +P++ L +
Sbjct: 504 YNLVTENLVLTEYTLYLGFHRLHDQMVKINQNLHRLQ--VAWRDAQQSSSPAADNLREQF 561
Query: 536 TRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVGGFKM--PLPDTCP 593
R+ I LS++ + E Q+L++ +Q +++ + + + ++ PLPD
Sbjct: 562 ERL-MTIYLSTKTAMT-EPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELTFPLPDGYS 619
Query: 594 MEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIRNPYLRS 650
A +PE F ++ + LIF R + L+ ++FI +F S + ++NP+LR+
Sbjct: 620 -SLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIERMKNPHLRA 678
Query: 651 KMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY-----LVRNLLKLYVDIEFTGSHTQF 704
K+ EVL MP + + +++F ++ + L L+K++VDIEFTG QF
Sbjct: 679 KLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFPHAPHLAEALIKVFVDIEFTGDPHQF 738
Query: 705 YDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYL 757
KFN R + +L Y+W ++R + + +A K + +L FLN L+ND+I+L
Sbjct: 739 EQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFL 798
Query: 758 LDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSML 817
LDE++ + ++K+ + E + EW+ + R+E+ + R ++NE + L
Sbjct: 799 LDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTL 857
Query: 818 AFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVC 877
AF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I
Sbjct: 858 AFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICT 917
Query: 878 IYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXX 937
IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 918 IYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSL 974
Query: 938 XXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI T + +V R V S +A H
Sbjct: 975 ADLQQQEEETYADACDEFLDPIMS--TLMSDPVVLPSSRVTVDRSTIARH 1022
Score = 105 (42.0 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 54/227 (23%), Positives = 95/227 (41%)
Query: 185 FLKEFFEEADFD----TLDPILKGLYENLRGSVLNVSALGN-FQQPLRALLYLVSFPVGV 239
FL+E E D T ++ +++ L G + ++ F L LLY
Sbjct: 248 FLEEVIEALIMDEEVRTFPEVMIPVFDILLGRIKDLELCQILFYAYLDILLYFTRQKDMA 307
Query: 240 KSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEAST 297
K V ++ PK NG++ + T +LG ++S L K+ P V + F S
Sbjct: 308 KVFV--EYIQPKDPS-NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGYFLNPSR 357
Query: 298 RRPADLLSSFTTIKTVMRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQ 356
P ++ I M ++ + +L LL+ + +T+ +L +L ++ N+ R I
Sbjct: 358 SSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIW 417
Query: 357 VEPLS------CASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
+ AS F+NL A +L+LC PF ++ +P Y
Sbjct: 418 ANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTY 464
Score = 61 (26.5 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 45 (20.9 bits), Expect = 1.8e-58, Sum P(4) = 1.8e-58
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 8 RSPEEI-EDI----ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRL 56
RS +EI E + ++++IFL+TL+ + + + P R YLE A +L E +D L
Sbjct: 73 RSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVDL--EDQDW-L 129
Query: 57 SRDLMERVLVDRL 69
+ +E+ + RL
Sbjct: 130 DMNNVEQAVFARL 142
>UNIPROTKB|F1SAK7 [details] [associations]
symbol:UBE4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:DRDAGEK EMBL:CU914235
Ensembl:ENSSSCT00000016461 Uniprot:F1SAK7
Length = 1067
Score = 553 (199.7 bits), Expect = 3.6e-58, Sum P(4) = 3.6e-58
Identities = 157/530 (29%), Positives = 266/530 (50%)
Query: 477 YPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQ-LNLEI 535
Y + E +T L LG + + Q++ R + +A A Q +P++ L +
Sbjct: 504 YNLVTENLVLTEYTLYLGFHRLHDQMVKINQNLHRLQ--IAWRDAQQSSSPAADNLREQF 561
Query: 536 TRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVGGFKM--PLPDTCP 593
R+ I LS++ + E Q+L++ +Q +++ + + + ++ PLPD
Sbjct: 562 ERL-MTIYLSTKTAMT-EPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELTFPLPDGYS 619
Query: 594 MEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIRNPYLRS 650
A +PE F ++ + LIF R + L+ ++FI +F S + ++NP+LR+
Sbjct: 620 -SLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIERMKNPHLRA 678
Query: 651 KMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY-----LVRNLLKLYVDIEFTGSHTQF 704
K+ EVL MP + + +++F ++ + L L+K++VDIEFTG QF
Sbjct: 679 KLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFAYAAHLAEALIKVFVDIEFTGDPHQF 738
Query: 705 YDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYL 757
KFN R + +L Y+W ++R + + +A K + +L FLN L+ND+I+L
Sbjct: 739 EQKFNYRRPMYPILRYMWGTDNYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFL 798
Query: 758 LDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSML 817
LDE++ + ++K+ + E + EW+ + R+E+ + R ++NE + L
Sbjct: 799 LDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTL 857
Query: 818 AFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVC 877
AF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I
Sbjct: 858 AFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICT 917
Query: 878 IYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXX 937
IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 918 IYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSL 974
Query: 938 XXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI T + +V R V S +A H
Sbjct: 975 ADLQQQEEETYADACDEFLDPIMS--TLMSDPVVLPSSRVTVDRSTIARH 1022
Score = 100 (40.3 bits), Expect = 3.6e-58, Sum P(4) = 3.6e-58
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 321 NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGYFLNPSRSSPQEIKVQEANIHQF 373
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 374 MARFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 433
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
F+NL A +L+LC PF ++ +P Y
Sbjct: 434 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTY 464
Score = 61 (26.5 bits), Expect = 3.6e-58, Sum P(4) = 3.6e-58
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 46 (21.3 bits), Expect = 3.6e-58, Sum P(4) = 3.6e-58
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 8 RSPEEI-EDI----ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRL 56
RS +EI E + ++++IFL+TL+ + + + P R YLE A +L E +D L
Sbjct: 73 RSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVDL--EDQDW-L 129
Query: 57 SRDLMERVLVDRL 69
+ +E+ + RL
Sbjct: 130 DMNNVEQAVFTRL 142
>UNIPROTKB|A5PKG6 [details] [associations]
symbol:UBE4A "Ubiquitin conjugation factor E4 A"
species:9913 "Bos taurus" [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
eggNOG:COG5113 EMBL:BC142480 IPI:IPI00854465 RefSeq:NP_001092469.1
UniGene:Bt.103454 ProteinModelPortal:A5PKG6 SMR:A5PKG6
STRING:A5PKG6 PRIDE:A5PKG6 Ensembl:ENSBTAT00000026289 GeneID:517544
KEGG:bta:517544 CTD:9354 GeneTree:ENSGT00390000009300
HOGENOM:HOG000007049 HOVERGEN:HBG059871 InParanoid:A5PKG6 KO:K10596
OMA:DRDAGEK OrthoDB:EOG4CRKZ8 NextBio:20872466 Uniprot:A5PKG6
Length = 1067
Score = 558 (201.5 bits), Expect = 6.0e-58, Sum P(3) = 6.0e-58
Identities = 159/530 (30%), Positives = 266/530 (50%)
Query: 477 YPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQ-LNLEI 535
Y + E +T L LG + + Q++ R + +A A Q +P++ L +
Sbjct: 504 YNLVTENLVLTEYTLYLGFHRLHDQMVKINQNLHRLQ--VAWRDAQQSSSPAADNLREQF 561
Query: 536 TRIEKEIELSSQEKLCYEAQILRDG-DL-IQHALSFYRLMIVWLVDLVGGFKMPLPDTCP 593
R+ + LS++ + E Q+L++ +L + A+ +L I + PLPD
Sbjct: 562 ERL-MTVYLSTKTAMT-EPQMLQNCLNLQVSMAVLLVQLAIGNEGSQLMELTFPLPDGYS 619
Query: 594 MEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIRNPYLRS 650
A +PE F ++ + LIF R + L+ ++FI +F S + ++NP+LR+
Sbjct: 620 -SLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIERMKNPHLRA 678
Query: 651 KMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY-----LVRNLLKLYVDIEFTGSHTQF 704
K+ EVL MP + + +++F ++ + L L+K++VDIEFTG QF
Sbjct: 679 KLAEVLEAVMPHMDQTPNPLVSSVFHRKRVFCNFPYASHLAEALIKVFVDIEFTGDPHQF 738
Query: 705 YDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYL 757
KFN R + +L+Y+W ++R + + +A K + +L FLN L+ND+I+L
Sbjct: 739 EQKFNYRRPMYPILKYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFL 798
Query: 758 LDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSML 817
LDE++ + ++K+ + E + EW+ + R+E+ + R ++NE + L
Sbjct: 799 LDEAIQYLSKIKIQQIE-KDRGEWDNLTPEARREKEAGLQMFGQLARFHNIMSNETIGTL 857
Query: 818 AFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVC 877
AF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I
Sbjct: 858 AFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICT 917
Query: 878 IYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXX 937
IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 918 IYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSL 974
Query: 938 XXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI T + +V R V S +A H
Sbjct: 975 ADLQQQEEETYADACDEFLDPIMS--TLMSDPVVLPSSRVTVDRSTIARH 1022
Score = 98 (39.6 bits), Expect = 6.0e-58, Sum P(3) = 6.0e-58
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 321 NGQMYQKT-LLGVILNISCL-----LKT-PGVIENHGYFLNPSRSSPQEIKVQEANIHQF 373
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 374 MARYHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 433
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
F+NL A +L+LC PF ++ +P Y
Sbjct: 434 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTY 464
Score = 62 (26.9 bits), Expect = 6.0e-58, Sum P(3) = 6.0e-58
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 162 LSADRDAGEKHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 213
Query: 128 LANPDFF 134
L P+ +
Sbjct: 214 LLTPEIY 220
Score = 49 (22.3 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 8 RSPEEI-EDI----ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRL 56
RS +EI E + ++++IFL+TL+ + + + P R YLE A +L E +D L
Sbjct: 73 RSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVDL--EDQDW-L 129
Query: 57 SRDLMERVLVDRLSGNFPAAEPPFLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQA 116
+ +E+ + RL + P +LIN L + +K++ L + ++A
Sbjct: 130 DMNNVEQAVFTRL-----LLQDPGNHLINMTSSTTLNLSADRDAGEKHIFCYLYSCFQRA 184
Query: 117 KKMI 120
K+ I
Sbjct: 185 KEEI 188
>ZFIN|ZDB-GENE-070410-21 [details] [associations]
symbol:ube4a "ubiquitination factor E4A (UFD2
homolog, yeast)" species:7955 "Danio rerio" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 ZFIN:ZDB-GENE-070410-21
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 CTD:9354 GeneTree:ENSGT00390000009300 KO:K10596
EMBL:CR847931 IPI:IPI00631668 RefSeq:XP_001922961.2
UniGene:Dr.160617 UniGene:Dr.69923 Ensembl:ENSDART00000059376
GeneID:557121 KEGG:dre:557121 NextBio:20881830 Bgee:E7F6E1
Uniprot:E7F6E1
Length = 1076
Score = 529 (191.3 bits), Expect = 2.1e-56, Sum P(3) = 2.1e-56
Identities = 136/418 (32%), Positives = 211/418 (50%)
Query: 587 PLPDTCPMEFACMPEHFVEDAMELLIFASRIP-KALDGVL--LDDFMNFIIMFMASPKYI 643
PLP +PE F E+ + IF R + L+ L+ + FI + M + +
Sbjct: 618 PLPSLENSLLCYVPEFFAENMGDFFIFLRRFADEVLESSAESLEHVLTFITVLMGNVDRM 677
Query: 644 RNPYLRSKMVEVLNCWMPRRSGSSSATAT--LFEGHQMSLEY-----LVRNLLKLYVDIE 696
+NP+LR+K+ EVL MP S A +F+ ++ Y L L+ ++VDIE
Sbjct: 678 KNPHLRAKLAEVLEAVMPHMETLSPGAAQPIMFQRQRVFSSYRHAPQLAEALITVFVDIE 737
Query: 697 FTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNF 749
FTG QF KFN R + +L+Y+W S+R + + +A + + +L FLN
Sbjct: 738 FTGDPHQFEQKFNYRRPMYAILKYMWGEKSYRESIKNLADYASENLEAMNPPLFLRFLNL 797
Query: 750 LINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKL 809
L+ND+I+LLDE++ + ++K+++ E EW+ R+E+ + R +
Sbjct: 798 LMNDAIFLLDEAIQYLSKIKILQLERDR-GEWDSLAPDARREKESSLQMFGQLGRFHNIM 856
Query: 810 ANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPK 869
+NE + LAF + +I F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+
Sbjct: 857 SNETIGTLAFLTSEIKGLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQ 916
Query: 870 QLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIE 929
QL+ I IY++L GD +N F A + DGRSY+ LF VL KI + G +I F
Sbjct: 917 QLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFCQTVRVLKKINKPGDMIISFSL 973
Query: 930 LGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
L D PDEFLDPI T +L ++ V S +A H
Sbjct: 974 LADKIKSLADRHQQEEETFSDAPDEFLDPIMS--TLMLDPVLLPSSNVTVDRSTIARH 1029
Score = 102 (41.0 bits), Expect = 2.1e-56, Sum P(3) = 2.1e-56
Identities = 62/228 (27%), Positives = 93/228 (40%)
Query: 185 FLKEFFEE--ADFD--TLDPILKGLYENLRGSV--LNVSALGNFQQPLRALLYLVSFPVG 238
FL+E AD + T ++ +++ G V L++ L F L LLY
Sbjct: 251 FLEEVIASLLADQEVRTFGEVMVPVFDIFHGRVKDLDLCQLLLFSY-LEILLYFSRQKDI 309
Query: 239 VKSLVNHQWWIPKSVYLNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEAS 296
K L+ H PK NG + T +LG ++S L K+ P V + F S
Sbjct: 310 AKVLMEHIQ--PKDPN-NGIQYQKT-LLGAILNISCL-----LKT-PGVVENHGFFLNPS 359
Query: 297 TRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNT-DTRENVLEYLAEVINRNSSRAHI 355
P +L + I M + L +L LL+ + +TR +L +L + N RA I
Sbjct: 360 RSSPQELKVQESNIHQFMGQFHDKLYQILKNLLQQSGETRHLLLSWLGGCLQANMGRAKI 419
Query: 356 QVEPLS------CASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
+ AS F+NL A +L+LC PF K +P Y
Sbjct: 420 WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFSRPYSPKLLTFNPTY 467
Score = 76 (31.8 bits), Expect = 2.1e-56, Sum P(3) = 2.1e-56
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 17 ILRKIFLVTLNEATTDA------DPRIAYLELTAAELLSEGKDMRLSRDLMERVLVDRLS 70
++++IFL+TL+ + PR YLE AA+L +G+D L+ D +E+ L +RL
Sbjct: 90 MIQRIFLITLDNSDPSLRSGNGIPPRCVYLEEMAADL--DGQDW-LNMDTIEQALFNRLL 146
Query: 71 GNFPAAEPPFLYLINC 86
P +Y+ +C
Sbjct: 147 LQEPGNH--LIYMTSC 160
Score = 55 (24.4 bits), Expect = 3.4e-54, Sum P(3) = 3.4e-54
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 66 VDRLSGNFPAAEPPFL-YLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYC 124
V LS + A E + YL CY+RA +E+ K+ +L + K + VS
Sbjct: 162 VVNLSADRDAGEKRAIPYLYACYQRAKEEITKVPE--------KLLSFAVHCKNLTVSNA 213
Query: 125 RIHLANPDFF 134
R L P+ +
Sbjct: 214 RTVLLTPEIY 223
Score = 51 (23.0 bits), Expect = 4.6e-51, Sum P(3) = 4.6e-51
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 313 VMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVI 346
+ + +Y+ L D+LL ++ E V+E+L EVI
Sbjct: 224 ISQNVYEQLLDLLLEAVRGAQFEE-VVEFLEEVI 256
>CGD|CAL0003403 [details] [associations]
symbol:orf19.5965 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
CGD:CAL0003403 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000151 EMBL:AACQ01000003 EMBL:AACQ01000004 GO:GO:0034450
eggNOG:COG5113 KO:K10597 RefSeq:XP_723029.1 RefSeq:XP_723176.1
ProteinModelPortal:Q5AND8 STRING:Q5AND8 GeneID:3635164
GeneID:3635292 KEGG:cal:CaO19.13386 KEGG:cal:CaO19.5965
Uniprot:Q5AND8
Length = 1075
Score = 484 (175.4 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 121/402 (30%), Positives = 206/402 (51%)
Query: 593 PMEFACMPEHFVEDAMELLIFASRI---PKALDGVLLDDFMNFIIMFMASPKYIRNPYLR 649
P + PE +E + F++R P + L+ F+ F + + P+ I NP+++
Sbjct: 625 PEPWKYYPEFILEGIINYCKFSTRFIGCPLVSNENKLNIFVEFSTILLRCPELIGNPHMK 684
Query: 650 SKMVEVLNCW-MPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKF 708
+ +VE+L +P ++G+ + +F G+Q+ ++ L+ +LL YV +E TG+ +QFYDKF
Sbjct: 685 ANLVELLFMGSLPMQNGAPGFISNIFNGNQLVMDNLLYSLLDFYVMVEKTGASSQFYDKF 744
Query: 709 NIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILEL 768
N R+ I+ +LE LWQ P +R +K ++ F+ ++ND+ YLLDE+ N + +
Sbjct: 745 NSRYYISVILEELWQNPRYRFQLTDYSKNNVD-FFIRFIARMLNDTTYLLDETFNLLNSI 803
Query: 769 KVIEAEMSNTAEW-ERRPAQERQER-TRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVA 826
+ E+ E E + E ++ M L+N+ + + ++++
Sbjct: 804 HDYQQEIKKRESGGEANETMGTDEELAQNLEEDERRVKSYMGLSNKTMELFKLFTKEVPR 863
Query: 827 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGD 886
F+LPE+++R+A ML+Y L LVGP+ +L + +PEKY+F PK++L + IYV L+
Sbjct: 864 GFVLPEIVDRLAGMLDYNLSILVGPRCSNLKVAEPEKYQFEPKKILSDLCEIYVSLS--- 920
Query: 887 TQNLFPAAISSDGRSYNEQLFSAAADVLW-KIGEDGRIIQEFIELGXXXXXXXXXXXXXX 945
Q F A++ DGRS+N F A +L K II IE
Sbjct: 921 AQPEFVIAVARDGRSFNIVYFQKAEKILTTKTFIKNEIINGLIEFANKAEKARLDEENEE 980
Query: 946 XXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
LG+IPDEFLDP+ FT + ++ R + S + H
Sbjct: 981 LELGEIPDEFLDPLM--FTLMEDPVILPSSRVSIDRSTIKAH 1020
Score = 168 (64.2 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 50/168 (29%), Positives = 89/168 (52%)
Query: 261 EMTSILGPFFHVSALPDH-AIFKSQPDVGQQCFSEASTRRPADLLSSFTTIKTVMRGLYK 319
E ++LGP +S L D+ A F GQ E ++ P + + + +++T + +
Sbjct: 307 EHKTLLGPLLRISPLLDNMASFY----FGQ----ETNSMSPVQINNLYGSMQTEYKVIID 358
Query: 320 DLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLSCASSGMFVNLSAVMLRL 378
L ++ L++ +T TRE++L++L +IN + R + AS G+ N+S V +RL
Sbjct: 359 HLFVIIDKLIRGSTKTREDLLQWLGNLINLSHLRRGSHADFKKLASDGIMYNISVVFIRL 418
Query: 379 CDPFLD-ANLTKRDKIDPKYVFYSSRLDLRSLTALHASSEEVSEWINK 425
PFLD K DKID Y F S +D++ + ++++ EE +E+ K
Sbjct: 419 SLPFLDYPTFGKIDKIDVDYFFKSDLIDIKEESRVNSTIEESNEYYAK 466
Score = 53 (23.7 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 21/101 (20%), Positives = 43/101 (42%)
Query: 479 FICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQ---GQTPSSQ--LNL 533
FI +CF +T L+ G+ F + + + + + E L +++ G P Q +
Sbjct: 484 FISDCFNLTLAYLHYGVGGIFVKYDRVKRQLDQMEQRLEAIESEHPIPGMNPMMQQLMRR 543
Query: 534 EITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMI 574
E+ ++ I ++ +A I D D H L + ++
Sbjct: 544 ELPNLKNAIINMRAQRHVIKA-IFDDRD---HQLEIFDFVV 580
Score = 38 (18.4 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 856 LTLKDPEKYEFRPKQLLKQIV 876
L K PE +++ P+ +L+ I+
Sbjct: 620 LKTKTPEPWKYYPEFILEGII 640
>UNIPROTKB|B7Z7P0 [details] [associations]
symbol:UBE4A "cDNA FLJ51394, highly similar to Ubiquitin
conjugation factor E4 A" species:9606 "Homo sapiens" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 GO:GO:0005737
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000209
GO:GO:0000151 GO:GO:0034450 EMBL:AP001582 HOGENOM:HOG000007049
OrthoDB:EOG4CRKZ8 UniGene:Hs.602967 UniGene:Hs.75275
HGNC:HGNC:12499 ChiTaRS:UBE4A EMBL:AP001267 EMBL:AK302328
IPI:IPI01012808 SMR:B7Z7P0 STRING:B7Z7P0 Ensembl:ENST00000545354
Uniprot:B7Z7P0
Length = 538
Score = 545 (196.9 bits), Expect = 8.9e-52, P = 8.9e-52
Identities = 137/417 (32%), Positives = 218/417 (52%)
Query: 587 PLPDTCPMEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYI 643
PLPD A +PE F ++ + LIF R + L+ ++FI +F S + +
Sbjct: 85 PLPDGYS-SLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIERM 143
Query: 644 RNPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQM--SLEY---LVRNLLKLYVDIEF 697
+NP+LR+K+ EVL MP + + +++F ++ + +Y L L+K++VDIEF
Sbjct: 144 KNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQLAEALIKVFVDIEF 203
Query: 698 TGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFL 750
TG QF KFN R + +L Y+W ++R + + +A K + +L FLN L
Sbjct: 204 TGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLL 263
Query: 751 INDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLA 810
+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+ + R ++
Sbjct: 264 MNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMS 322
Query: 811 NEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQ 870
NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+Q
Sbjct: 323 NETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQ 382
Query: 871 LLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIEL 930
L+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 383 LVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIMAFSNL 439
Query: 931 GXXXXXXXXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI C +V R V S +A H
Sbjct: 440 AERIKSLADLQQQEEETYADACDEFLDPIMSTLMC--DPVVLPSSRVTVDRSTIARH 494
>UNIPROTKB|F1M8W6 [details] [associations]
symbol:Ube4a "Ubiquitin conjugation factor E4 A"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
RGD:1303173 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000151 GO:GO:0034450 IPI:IPI00476304
Ensembl:ENSRNOT00000021060 ArrayExpress:F1M8W6 Uniprot:F1M8W6
Length = 1030
Score = 300 (110.7 bits), Expect = 1.3e-48, Sum P(5) = 1.3e-48
Identities = 76/228 (33%), Positives = 117/228 (51%)
Query: 760 ESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAF 819
ES+ + ++K+ + E + EWE + R+E+ + R ++NE + L+F
Sbjct: 765 ESIKYLSKIKIQQIE-KDRGEWESLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLSF 823
Query: 820 TSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIY 879
+ +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY
Sbjct: 824 LTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIY 883
Query: 880 VHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXX 939
++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L
Sbjct: 884 LNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLAD 940
Query: 940 XXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI T + +V R V S +A H
Sbjct: 941 LQQQEEETYADACDEFLDPIMS--TLMSDPVVLPSSRVTVDRSTIARH 986
Score = 228 (85.3 bits), Expect = 1.3e-48, Sum P(5) = 1.3e-48
Identities = 79/278 (28%), Positives = 132/278 (47%)
Query: 477 YPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQ-LNLEI 535
Y + E +T L LG + + Q++ R + +A A Q +P++ L +
Sbjct: 506 YNLVTENLALTEYTLYLGFHRLHDQMVKINQNLHRLQ--VAWRDAQQSSSPAADNLREQF 563
Query: 536 TRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVGG--------FKMP 587
R+ I LS++ + E Q+L Q+ L+ M V LV L G P
Sbjct: 564 ERL-MTIYLSTKTAMT-EPQML------QNCLNLQVSMAVLLVQLAIGNEGSQPIELSFP 615
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIR 644
LPD A +PE F ++ + LIF R + + L+ ++FI +F S + ++
Sbjct: 616 LPDGYS-SLAYVPEFFADNLGDFLIFLRRFAEDILETSADSLEHVLHFITIFTGSIERMK 674
Query: 645 NPYLRSKMVEVLNCWMPRRSGSSSA-TATLFEGHQMSLEY-----LVRNLLKLYVDIEFT 698
NP+LR+K+ EVL MP + S +++F ++ + L L+K++VDIEFT
Sbjct: 675 NPHLRAKLAEVLEAVMPHLDQTPSPLVSSVFHRKRVFCNFPYAPQLSEALIKVFVDIEFT 734
Query: 699 GSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAK 736
G QF KFN R + +L Y+W S+R + + ++K
Sbjct: 735 GDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKYLSK 772
Score = 102 (41.0 bits), Expect = 1.3e-48, Sum P(5) = 1.3e-48
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ I
Sbjct: 323 NGQMYQKT-LLGVILNISCL-----LKT-PGVVENHGFFLNPSRSSPQEIKVQEANIHQF 375
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ N+ R I + AS
Sbjct: 376 MAQFHEKIYQMLKNLLQLSPETKHGILFWLGNCLHANAGRTKIWANQMPEIFFQMYASDA 435
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSSRLDL-RSLTALH 413
F+NL A +L+LC PF ++ +P Y D R + ++H
Sbjct: 436 FFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCVLKDLNDEERKIKSVH 483
Score = 61 (26.5 bits), Expect = 1.3e-48, Sum P(5) = 1.3e-48
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 69 LSGNFPAAEPP-FLYLINCYRRAHDELKKIGNMKDKNLRSELEAVVKQAKKMIVSYCRIH 127
LS + A E F YL +C++RA +E+ K+ +NL L V Q + + VS R
Sbjct: 164 LSADRDAGERHIFCYLYSCFQRAKEEITKV----PENL---LPFAV-QCRNLTVSNTRTV 215
Query: 128 LANPDFF 134
L P+ +
Sbjct: 216 LLTPEIY 222
Score = 46 (21.3 bits), Expect = 1.3e-48, Sum P(5) = 1.3e-48
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 17 ILRKIFLVTLNEATTDAD-----P-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + P R YLE A EL E +D L +E+ + RL
Sbjct: 89 MIQRIFLITLDNSDPNLKSGNGIPSRCVYLEEMAVEL--EDQDW-LDMSNVEQAIFARL 144
>UNIPROTKB|E1C6M5 [details] [associations]
symbol:CBL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 GO:GO:0005737 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000209 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 OMA:DRDAGEK EMBL:AADN02041816
EMBL:AADN02041817 EMBL:AADN02041818 EMBL:AADN02041819
EMBL:AADN02041820 EMBL:AADN02041821 EMBL:AADN02041822
EMBL:AADN02041823 EMBL:AADN02041824 EMBL:AADN02041825
EMBL:AADN02041826 EMBL:AADN02041827 EMBL:AADN02041828
EMBL:AADN02041829 EMBL:AADN02041830 EMBL:AADN02041831
EMBL:AADN02041832 EMBL:AADN02041833 IPI:IPI00820763
Ensembl:ENSGALT00000040809 ArrayExpress:E1C6M5 Uniprot:E1C6M5
Length = 1072
Score = 452 (164.2 bits), Expect = 4.9e-47, Sum P(5) = 4.9e-47
Identities = 124/435 (28%), Positives = 219/435 (50%)
Query: 475 SKYPFICECFFMTARVLNLGLLKAFSD-FKHLVQDISRAEDTLATLKATQGQTPSSQ-LN 532
+ Y + E +T L+LG D + Q + R + +A +A Q P++ L
Sbjct: 505 NSYNLVTENLVLTQYTLHLGFHSRLHDQMVKINQSLHRLQ--VAWREAQQSSNPAADSLR 562
Query: 533 LEITRIEKEIELSSQEKLCYEAQILRDGDL-IQHALSFYRLMIVWLVDLVGGFKMPLPDT 591
+ R+ I LS + + + +L + A+ +L I PLP
Sbjct: 563 EQFERL-MTIYLSMKTAMTEPQMLQNCLNLQVSMAVLLVQLAIGNQGTEPLELTFPLPGV 621
Query: 592 CPMEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIRNPYL 648
A +PE F ++ + IF R + L+ ++F+ +FM + ++NP+L
Sbjct: 622 ENSALAYVPEFFADNLGDFFIFLRRFADDILETSADSLEHILHFVTVFMGDVERMKNPHL 681
Query: 649 RSKMVEVLNCWMPRRSGSSSA-TATLFEGHQM--SLEY---LVRNLLKLYVDIEFTGSHT 702
R+K+ EVL MP + + +++F ++ S +Y L L+K++VDIEFTG
Sbjct: 682 RAKLAEVLEAVMPHLDQAQNPLVSSVFHRKRVFCSYQYAAHLAEALIKVFVDIEFTGDPH 741
Query: 703 QFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSI 755
QF KFN R + +L Y+W S+R + + +A + + +L FLN L+ND+I
Sbjct: 742 QFEQKFNYRRPMYPILRYMWGTDSYRQSIKALADYASENLEAMNPPLFLRFLNLLMNDAI 801
Query: 756 YLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVS 815
+LLDE++ + ++K+ + E + EW+ + R+E+ + R ++NE +
Sbjct: 802 FLLDEAIQYLSKIKIQQIE-KDRGEWDNLSQEARREKESSLQMFGQLARFHNIMSNETIG 860
Query: 816 MLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQI 875
LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I
Sbjct: 861 TLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDI 920
Query: 876 VCIYVHLARGDTQNL 890
IY++L DT ++
Sbjct: 921 CTIYLNLGCWDTDDV 935
Score = 109 (43.4 bits), Expect = 4.9e-47, Sum P(5) = 4.9e-47
Identities = 39/151 (25%), Positives = 67/151 (44%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ + I
Sbjct: 322 NGQMYQKT-LLGAILNISCL-----LKT-PGVVENHGYFLNPSRSSPQEIKVQESNIHQF 374
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ NS R I + AS
Sbjct: 375 MAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANSGRTKIWANQMPEIFFQMYASDA 434
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
F+NL A +L+LC PF K +P Y
Sbjct: 435 FFLNLGAALLKLCQPFCKPKSPKLLTFNPTY 465
Score = 53 (23.7 bits), Expect = 4.9e-47, Sum P(5) = 4.9e-47
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 69 LSGNFPAAEPPFL-YLINCYRRAHDELKKI 97
LS + A E L YL C++RA +E+ K+
Sbjct: 163 LSADRDAGEKQILRYLYACFQRAREEITKV 192
Score = 49 (22.3 bits), Expect = 4.9e-47, Sum P(5) = 4.9e-47
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 17 ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + + P R YLE AA+L + +D L + +E+ L RL
Sbjct: 88 MIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADL--DDQDW-LDMENIEQALFTRL 143
Score = 43 (20.2 bits), Expect = 4.9e-47, Sum P(5) = 4.9e-47
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 950 DIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI T + ++ R V S +A H
Sbjct: 989 DACDEFLDPIMS--TLMSDPVILPSSRVTVDRSTIARH 1024
Score = 38 (18.4 bits), Expect = 8.7e-40, Sum P(5) = 8.7e-40
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 199 DPILKGLYEN-LRGSVLNVSAL 219
DP +Y+ L G++LN+S L
Sbjct: 319 DPNNGQMYQKTLLGAILNISCL 340
>UNIPROTKB|F1NIK2 [details] [associations]
symbol:CBL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:AADN02041816 EMBL:AADN02041817
EMBL:AADN02041818 EMBL:AADN02041819 EMBL:AADN02041820
EMBL:AADN02041821 EMBL:AADN02041822 EMBL:AADN02041823
EMBL:AADN02041824 EMBL:AADN02041825 EMBL:AADN02041826
EMBL:AADN02041827 EMBL:AADN02041828 EMBL:AADN02041829
EMBL:AADN02041830 EMBL:AADN02041831 EMBL:AADN02041832
EMBL:AADN02041833 IPI:IPI00679951 Ensembl:ENSGALT00000011196
ArrayExpress:F1NIK2 Uniprot:F1NIK2
Length = 1072
Score = 449 (163.1 bits), Expect = 1.1e-46, Sum P(5) = 1.1e-46
Identities = 121/426 (28%), Positives = 215/426 (50%)
Query: 475 SKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQ-LNL 533
+ Y + E +T L+LG + + Q + R + +A +A Q P++ L
Sbjct: 505 NSYNLVTENLVLTQYTLHLGFHRLHDQMVKINQSLHRLQ--VAWREAQQSSNPAADSLRE 562
Query: 534 EITRIEKEIELSSQEKLCYEAQILRDGDL-IQHALSFYRLMIVWLVDLVGGFKMPLPDTC 592
+ R+ I LS + + + +L + A+ +L I PLP
Sbjct: 563 QFERL-MTIYLSMKTAMTEPQMLQNCLNLQVSMAVLLVQLAIGNQGTEPLELTFPLPGVE 621
Query: 593 PMEFACMPEHFVEDAMELLIFASRIPKAL---DGVLLDDFMNFIIMFMASPKYIRNPYLR 649
A +PE F ++ + IF R + L+ ++F+ +FM + ++NP+LR
Sbjct: 622 NSALAYVPEFFADNLGDFFIFLRRFADDILETSADSLEHILHFVTVFMGDVERMKNPHLR 681
Query: 650 SKMVEVLNCWMPRRSGSSSA-TATLFEGHQM--SLEY---LVRNLLKLYVDIEFTGSHTQ 703
+K+ EVL MP + + +++F ++ S +Y L L+K++VDIEFTG Q
Sbjct: 682 AKLAEVLEAVMPHLDQAQNPLVSSVFHRKRVFCSYQYAAHLAEALIKVFVDIEFTGDPHQ 741
Query: 704 FYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIY 756
F KFN R + +L Y+W S+R + + +A + + +L FLN L+ND+I+
Sbjct: 742 FEQKFNYRRPMYPILRYMWGTDSYRQSIKALADYASENLEAMNPPLFLRFLNLLMNDAIF 801
Query: 757 LLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSM 816
LLDE++ + ++K+ + E + EW+ + R+E+ + R ++NE +
Sbjct: 802 LLDEAIQYLSKIKIQQIE-KDRGEWDNLSQEARREKESSLQMFGQLARFHNIMSNETIGT 860
Query: 817 LAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIV 876
LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I
Sbjct: 861 LAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDIC 920
Query: 877 CIYVHL 882
IY++L
Sbjct: 921 TIYLNL 926
Score = 109 (43.4 bits), Expect = 1.1e-46, Sum P(5) = 1.1e-46
Identities = 39/151 (25%), Positives = 67/151 (44%)
Query: 256 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQ--CFSEASTRRPADLLSSFTTIKTV 313
NG++ + T +LG ++S L K+ P V + F S P ++ + I
Sbjct: 322 NGQMYQKT-LLGAILNISCL-----LKT-PGVVENHGYFLNPSRSSPQEIKVQESNIHQF 374
Query: 314 MRGLYKDLGDVLLALLK-NTDTRENVLEYLAEVINRNSSRAHIQVEPLS------CASSG 366
M ++ + +L LL+ + +T+ +L +L ++ NS R I + AS
Sbjct: 375 MAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANSGRTKIWANQMPEIFFQMYASDA 434
Query: 367 MFVNLSAVMLRLCDPFLDANLTKRDKIDPKY 397
F+NL A +L+LC PF K +P Y
Sbjct: 435 FFLNLGAALLKLCQPFCKPKSPKLLTFNPTY 465
Score = 53 (23.7 bits), Expect = 1.1e-46, Sum P(5) = 1.1e-46
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 69 LSGNFPAAEPPFL-YLINCYRRAHDELKKI 97
LS + A E L YL C++RA +E+ K+
Sbjct: 163 LSADRDAGEKQILRYLYACFQRAREEITKV 192
Score = 49 (22.3 bits), Expect = 1.1e-46, Sum P(5) = 1.1e-46
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 17 ILRKIFLVTLNEA-----TTDADP-RIAYLELTAAELLSEGKDMRLSRDLMERVLVDRL 69
++++IFL+TL+ + + + P R YLE AA+L + +D L + +E+ L RL
Sbjct: 88 MIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADL--DDQDW-LDMENIEQALFTRL 143
Score = 43 (20.2 bits), Expect = 1.1e-46, Sum P(5) = 1.1e-46
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 950 DIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIVSFVAVH 987
D DEFLDPI T + ++ R V S +A H
Sbjct: 989 DACDEFLDPIMS--TLMSDPVILPSSRVTVDRSTIARH 1024
Score = 38 (18.4 bits), Expect = 1.9e-39, Sum P(5) = 1.9e-39
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 199 DPILKGLYEN-LRGSVLNVSAL 219
DP +Y+ L G++LN+S L
Sbjct: 319 DPNNGQMYQKTLLGAILNISCL 340
>WB|WBGene00006734 [details] [associations]
symbol:ufd-2 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0040011
GO:GO:0007283 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0000209 EMBL:Z47812 GO:GO:0000151
GO:GO:0051865 GO:GO:0034450 GO:GO:0042006
GeneTree:ENSGT00390000009300 KO:K10597 UniGene:Cel.7502
GeneID:174295 KEGG:cel:CELE_T05H10.5 UCSC:T05H10.5a CTD:174295
HOGENOM:HOG000020029 NextBio:883404 RefSeq:NP_495691.1
ProteinModelPortal:Q95QB5 SMR:Q95QB5 IntAct:Q95QB5
MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
Length = 984
Score = 425 (154.7 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 130/501 (25%), Positives = 242/501 (48%)
Query: 476 KYPFICECFFMTARVLNL---GLLKAFSDF-KHLVQ---DISRAEDTLATLKATQGQTPS 528
+Y F CFF+T L L+ S++ +HL + I+ ++ L T+ +
Sbjct: 441 EYHFSTVCFFLTIAAQRLVIPPLMNQISEYSRHLKELKHKINALKEKLNTVSGFERAEVE 500
Query: 529 SQLNLEITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG------ 582
+LN E + +L S+ LC + Q +D L+ ++ F + ++++L+
Sbjct: 501 KKLNYET----EHWKLMSRHLLCVKTQA-QDPALMASSMDFVDKQMKFILNLLCDNLDLL 555
Query: 583 GFKMPLPDTCPMEFACMPEHFVEDAMELLIFASRIPKALDGVLLD---DFMNFIIMFMAS 639
G LP F +PE+F+EDA++ IFA I + +L++ D+++ + +
Sbjct: 556 GDDSQLPTEVSQMFCALPEYFLEDALDFYIFA--ISNGMK-LLMERNADWISRLTVLFTQ 612
Query: 640 PKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTG 699
YI++P+L SK+V VL+ P + L +M+ E L+ ++K Y D E G
Sbjct: 613 YHYIKSPFLVSKLVRVLSSIQPPLWFN---VVRL----RMAQENLLMCMIKFYSDFEDNG 665
Query: 700 SHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLD 759
FY+KFN+R NI +LE + + ++ + +A+E ++ F+N +IND+ + +D
Sbjct: 666 D---FYEKFNVRGNIQYMLEKMEEDMFYKGKFMDMARECG-AEFIRFVNMVINDATWCID 721
Query: 760 ESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAF 819
ESL+ + + +E +M+N EW+ + R + ++ + ++ + A ++ +L
Sbjct: 722 ESLSGLKSIHDVEKKMANKVEWDNTDQEIRNQDLGVYEEAKRKVKGWLGTAKSNLKLLLS 781
Query: 820 TSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIY 879
+ PF P + ER+A+MLN+ L QL+G + L +KDP Y + P++ + ++ IY
Sbjct: 782 ITVNSPEPFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIY 841
Query: 880 VHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDG-RIIQEFIELGXXXXXXX 938
+ L F I+ D R+Y+ + F A + + K G ++ F L
Sbjct: 842 LKL----NMPAFVKYIAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEY 897
Query: 939 XXXXXXXXXLGDIPDEFLDPI 959
D+P+EF DPI
Sbjct: 898 EAKAELEEEYDDVPEEFKDPI 918
Score = 89 (36.4 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 42/202 (20%), Positives = 81/202 (40%)
Query: 191 EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVGVKS--------- 241
+E D D + ++ LR ++ N + +R +L +++ + ++
Sbjct: 196 DECDEDAITETFNPIFGILRSGIICQRFEDNKDEIVRQILRVMNLLLSIRLPSNGPRPLS 255
Query: 242 --LVNHQWWIPK-SVYLNGRVIEMTSILGPFFHV----SAL-PDHAIFKSQPDVGQQCFS 293
LVN + ++P S + GR + S LGPFF SA P+H +F + ++
Sbjct: 256 NLLVNREDFLPTPSEKIQGREFGLMSFLGPFFSYGLESSARRPNHRVFVDCEEDARKYDG 315
Query: 294 EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRA 353
+T + I+T++ L +L L + +R L ++A +I+ N R
Sbjct: 316 SVNTEQKL-YFQRMDPIRTMLHQL-------MLPLASDQGSRNKTLRWIATIISTNDIRT 367
Query: 354 HIQVEPLSCASSGMFVNLSAVM 375
+P N +VM
Sbjct: 368 RSHYDPSDVLCDHYMTNFLSVM 389
>UNIPROTKB|Q95QB5 [details] [associations]
symbol:ufd-2 "Protein UFD-2, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040011 GO:GO:0007283 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0000209 EMBL:Z47812 GO:GO:0000151 GO:GO:0051865 GO:GO:0034450
GO:GO:0042006 GeneTree:ENSGT00390000009300 KO:K10597
UniGene:Cel.7502 GeneID:174295 KEGG:cel:CELE_T05H10.5
UCSC:T05H10.5a CTD:174295 HOGENOM:HOG000020029 NextBio:883404
RefSeq:NP_495691.1 ProteinModelPortal:Q95QB5 SMR:Q95QB5
IntAct:Q95QB5 MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
Length = 984
Score = 425 (154.7 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 130/501 (25%), Positives = 242/501 (48%)
Query: 476 KYPFICECFFMTARVLNL---GLLKAFSDF-KHLVQ---DISRAEDTLATLKATQGQTPS 528
+Y F CFF+T L L+ S++ +HL + I+ ++ L T+ +
Sbjct: 441 EYHFSTVCFFLTIAAQRLVIPPLMNQISEYSRHLKELKHKINALKEKLNTVSGFERAEVE 500
Query: 529 SQLNLEITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG------ 582
+LN E + +L S+ LC + Q +D L+ ++ F + ++++L+
Sbjct: 501 KKLNYET----EHWKLMSRHLLCVKTQA-QDPALMASSMDFVDKQMKFILNLLCDNLDLL 555
Query: 583 GFKMPLPDTCPMEFACMPEHFVEDAMELLIFASRIPKALDGVLLD---DFMNFIIMFMAS 639
G LP F +PE+F+EDA++ IFA I + +L++ D+++ + +
Sbjct: 556 GDDSQLPTEVSQMFCALPEYFLEDALDFYIFA--ISNGMK-LLMERNADWISRLTVLFTQ 612
Query: 640 PKYIRNPYLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTG 699
YI++P+L SK+V VL+ P + L +M+ E L+ ++K Y D E G
Sbjct: 613 YHYIKSPFLVSKLVRVLSSIQPPLWFN---VVRL----RMAQENLLMCMIKFYSDFEDNG 665
Query: 700 SHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLD 759
FY+KFN+R NI +LE + + ++ + +A+E ++ F+N +IND+ + +D
Sbjct: 666 D---FYEKFNVRGNIQYMLEKMEEDMFYKGKFMDMARECG-AEFIRFVNMVINDATWCID 721
Query: 760 ESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAF 819
ESL+ + + +E +M+N EW+ + R + ++ + ++ + A ++ +L
Sbjct: 722 ESLSGLKSIHDVEKKMANKVEWDNTDQEIRNQDLGVYEEAKRKVKGWLGTAKSNLKLLLS 781
Query: 820 TSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIY 879
+ PF P + ER+A+MLN+ L QL+G + L +KDP Y + P++ + ++ IY
Sbjct: 782 ITVNSPEPFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIY 841
Query: 880 VHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDG-RIIQEFIELGXXXXXXX 938
+ L F I+ D R+Y+ + F A + + K G ++ F L
Sbjct: 842 LKL----NMPAFVKYIAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEY 897
Query: 939 XXXXXXXXXLGDIPDEFLDPI 959
D+P+EF DPI
Sbjct: 898 EAKAELEEEYDDVPEEFKDPI 918
Score = 89 (36.4 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 42/202 (20%), Positives = 81/202 (40%)
Query: 191 EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSFPVGVKS--------- 241
+E D D + ++ LR ++ N + +R +L +++ + ++
Sbjct: 196 DECDEDAITETFNPIFGILRSGIICQRFEDNKDEIVRQILRVMNLLLSIRLPSNGPRPLS 255
Query: 242 --LVNHQWWIPK-SVYLNGRVIEMTSILGPFFHV----SAL-PDHAIFKSQPDVGQQCFS 293
LVN + ++P S + GR + S LGPFF SA P+H +F + ++
Sbjct: 256 NLLVNREDFLPTPSEKIQGREFGLMSFLGPFFSYGLESSARRPNHRVFVDCEEDARKYDG 315
Query: 294 EASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRA 353
+T + I+T++ L +L L + +R L ++A +I+ N R
Sbjct: 316 SVNTEQKL-YFQRMDPIRTMLHQL-------MLPLASDQGSRNKTLRWIATIISTNDIRT 367
Query: 354 HIQVEPLSCASSGMFVNLSAVM 375
+P N +VM
Sbjct: 368 RSHYDPSDVLCDHYMTNFLSVM 389
>UNIPROTKB|I3LQG8 [details] [associations]
symbol:LOC100737278 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:FP104527 EMBL:FP565389
Ensembl:ENSSSCT00000024710 OMA:INECTHY Uniprot:I3LQG8
Length = 289
Score = 353 (129.3 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 84/246 (34%), Positives = 129/246 (52%)
Query: 743 YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENI 802
++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R E +
Sbjct: 10 FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERV 69
Query: 803 IRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPE 862
R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ + L +++PE
Sbjct: 70 SRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPE 129
Query: 863 KYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGR 922
KY F PK+LL Q+ IY+ L D F AI+ D RSY+++LF + K G
Sbjct: 130 KYGFEPKKLLDQLTDIYLQL---DCAR-FAKAIADDQRSYSKELFEEVISKMRKAGIKST 185
Query: 923 I-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQVCFTCLLSSLVRTVLRTMVIV 981
I I++F L D PDEF DP+ L++ VR T++
Sbjct: 186 IAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLM---DTLMTDPVRLPSGTIMDR 242
Query: 982 SFVAVH 987
S + H
Sbjct: 243 SIILRH 248
>UNIPROTKB|F1RIG2 [details] [associations]
symbol:F1RIG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034976 "response to endoplasmic reticulum stress"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR019474 Pfam:PF10408 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 GeneTree:ENSGT00390000009300 EMBL:FP104527
Ensembl:ENSSSCT00000003769 OMA:GSSFGAC Uniprot:F1RIG2
Length = 969
Score = 250 (93.1 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 67/236 (28%), Positives = 114/236 (48%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQLNLE- 534
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 737 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRH 794
Query: 535 ---ITRIEKEIELSSQEKLCYEAQILRDGDLIQHALSFYRLMIVWLVDLVG----GFKMP 587
+ R + +++ + K C +A +L D ++ L+FY L+I L+ ++ +P
Sbjct: 795 REMLKRCKTQLKKLVRCKACADAGLL-DESFLRRCLNFYGLLIQLLLRILDPAYPDVTLP 853
Query: 588 LPDTCPMEFACMPEHFVEDAMELLIFASRI-PKALDGVLLDDFMNFIIMFMASPKYIRNP 646
L P FA +PE +VED E L F + P+ L D + F+++ + + YIRNP
Sbjct: 854 LNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNP 913
Query: 647 YLRSKMVEVLNCWMPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHT 702
YL +K+VEV+ P + + E H +S + LV +L+K Y D +G +
Sbjct: 914 YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDTRHSGKRS 969
Score = 169 (64.5 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 70/258 (27%), Positives = 120/258 (46%)
Query: 182 PPGFLKEFF------EEADFDTLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLVSF 235
P GF++E EE PIL+GL L ++ + F+ PL AL L
Sbjct: 483 PYGFIQELVRTTHQDEEVFKQIFIPILQGLA--LAAKECSLDS-DYFKYPLMALGELCET 539
Query: 236 PVG----VKSLV-NHQWWIPKSVYL-NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQ 289
G V +LV + W+PKS+ +GR ++ S LG FF S + +
Sbjct: 540 KFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSG 599
Query: 290 QCFSEASTRRPADLLSSFTTIKTVMRGLYKDLGDVLLALLKNTDTRENVLEYLAEVINRN 349
+ +TR + L + ++ + L+K L +LL N +TRE L Y+A V+N N
Sbjct: 600 PAITLENTRVVSQSLQHY--LELGRQELFKILHSILL----NGETREAALGYMAAVVNAN 653
Query: 350 SSRAHIQVEPLSCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYSS-RLDL-R 407
+A +Q + ++ G +N V+ +L + K + +DP Y+F+ R+ L
Sbjct: 654 MKKAQMQTDDRLVSTDGFMLNFLWVLQQL------STKIKLETVDPTYIFHPRCRITLPN 707
Query: 408 SLTALHASSEEVSEWINK 425
T ++A+ E+V++W+ +
Sbjct: 708 DETRVNATMEDVNDWLTE 725
Score = 41 (19.5 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 82 YLINCYRRAHDELKKIGNMKDKNLRSEL 109
YLI C+ R E KK M + S+L
Sbjct: 414 YLIECFDRVGIEEKKAPKMCSQPAVSQL 441
>UNIPROTKB|K7ERA7 [details] [associations]
symbol:UBE4B "Ubiquitin conjugation factor E4 B"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR019474 Pfam:PF10408
EMBL:AL590639 EMBL:AL096841 HGNC:HGNC:12500 Ensembl:ENST00000488228
Uniprot:K7ERA7
Length = 98
Score = 185 (70.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 32/92 (34%), Positives = 59/92 (64%)
Query: 694 DIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLIND 753
D+E TG+ ++FYDKF IR++I+ + + LWQ +H + + ++ ++ ++N LIND
Sbjct: 2 DVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLIND 59
Query: 754 SIYLLDESLNKILELKVIEAEMSNTAEWERRP 785
+ +LLDESL + + ++ EM N +W++ P
Sbjct: 60 TTFLLDESLESLKRIHEVQEEMKNKEQWDQLP 91
>UNIPROTKB|K7EP75 [details] [associations]
symbol:UBE4B "Ubiquitin conjugation factor E4 B"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR019474 Pfam:PF10408
EMBL:AL590639 EMBL:AL096841 HGNC:HGNC:12500 Ensembl:ENST00000470736
Uniprot:K7EP75
Length = 276
Score = 132 (51.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 31/109 (28%), Positives = 61/109 (55%)
Query: 319 KDLGDVLLALLKNTDTRENVLEYLAEVINRNSSRAHIQVEPLSCASSGMFVNLSAVMLRL 378
++L +L ++L N +TRE L Y+A V+N N +A +Q + ++ G +N V+ +L
Sbjct: 93 QELFKILHSILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQL 152
Query: 379 CDPFLDANLTKRDKIDPKYVFYSS-RLDL-RSLTALHASSEEVSEWINK 425
+ K + +DP Y+F+ R+ L T ++A+ E+V++W+ +
Sbjct: 153 ------STKIKLETVDPTYIFHPRCRITLPNDETRVNATMEDVNDWLTE 195
Score = 58 (25.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 476 KYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKATQGQTPSSQL 531
K+P ECFF+T +L +L + + ++ I T+ LK + Q S L
Sbjct: 207 KFP--TECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPL 260
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1002 967 0.00096 122 3 11 22 0.37 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 622 (66 KB)
Total size of DFA: 439 KB (2210 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.89u 0.14s 86.03t Elapsed: 00:00:04
Total cpu time: 85.90u 0.14s 86.04t Elapsed: 00:00:04
Start: Thu May 9 14:17:44 2013 End: Thu May 9 14:17:48 2013