Query 001867
Match_columns 1002
No_of_seqs 912 out of 6645
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 02:23:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001867.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001867hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.5E-84 2.6E-88 802.0 33.6 592 19-618 6-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 9.1E-67 3.1E-71 648.5 26.7 515 69-587 126-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-61 4.4E-66 597.0 37.7 553 56-610 3-625 (680)
4 3t6q_A CD180 antigen; protein- 100.0 5.2E-59 1.8E-63 566.0 30.8 526 74-609 17-562 (606)
5 3t6q_A CD180 antigen; protein- 100.0 1.6E-58 5.4E-63 561.7 28.7 526 59-591 14-566 (606)
6 3j0a_A TOLL-like receptor 5; m 100.0 7.6E-58 2.6E-62 574.2 35.4 506 69-588 24-563 (844)
7 1ziw_A TOLL-like receptor 3; i 100.0 8.9E-58 3E-62 562.8 34.0 520 69-589 49-626 (680)
8 3j0a_A TOLL-like receptor 5; m 100.0 3.8E-57 1.3E-61 567.9 33.3 522 73-609 8-562 (844)
9 3vq2_A TLR4, TOLL-like recepto 100.0 9.8E-58 3.3E-62 554.8 25.9 525 73-611 15-562 (606)
10 4eco_A Uncharacterized protein 100.0 5.7E-58 1.9E-62 556.3 21.6 499 23-562 28-600 (636)
11 3vq2_A TLR4, TOLL-like recepto 100.0 4.2E-57 1.4E-61 549.2 25.6 511 69-591 32-564 (606)
12 4ecn_A Leucine-rich repeat pro 100.0 5.7E-57 1.9E-61 555.0 25.4 501 23-561 267-863 (876)
13 2z63_A TOLL-like receptor 4, v 100.0 1.3E-53 4.6E-58 514.7 26.8 506 74-591 12-537 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 6.4E-53 2.2E-57 506.2 20.4 490 56-590 3-515 (549)
15 3omv_A RAF proto-oncogene seri 100.0 6.1E-52 2.1E-56 449.6 23.2 262 683-974 36-300 (307)
16 4asz_A BDNF/NT-3 growth factor 100.0 5.1E-52 1.7E-56 450.7 20.7 260 683-975 13-290 (299)
17 4aoj_A High affinity nerve gro 100.0 2.5E-51 8.6E-56 451.6 23.6 259 683-974 41-319 (329)
18 4gt4_A Tyrosine-protein kinase 100.0 1.6E-51 5.4E-56 448.8 19.6 257 684-972 27-304 (308)
19 4g3f_A NF-kappa-beta-inducing 100.0 4.3E-51 1.5E-55 447.1 19.1 273 682-999 57-334 (336)
20 2z63_A TOLL-like receptor 4, v 100.0 1.4E-50 4.8E-55 488.3 24.6 491 68-568 27-537 (570)
21 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.6E-51 1.9E-55 440.5 17.5 253 683-968 32-285 (311)
22 4b9d_A Serine/threonine-protei 100.0 8.8E-51 3E-55 446.5 18.5 254 681-967 22-276 (350)
23 4eco_A Uncharacterized protein 100.0 9.1E-51 3.1E-55 493.1 19.8 462 94-587 82-602 (636)
24 4fih_A Serine/threonine-protei 100.0 4.3E-50 1.5E-54 440.3 22.3 249 683-967 74-323 (346)
25 3fpq_A Serine/threonine-protei 100.0 6E-50 2.1E-54 430.9 22.0 246 686-967 29-282 (290)
26 4ase_A Vascular endothelial gr 100.0 1.2E-49 4.1E-54 441.6 20.3 268 678-976 58-349 (353)
27 4g8a_A TOLL-like receptor 4; l 100.0 1.1E-48 3.9E-53 478.1 29.4 553 38-609 7-582 (635)
28 3hmm_A TGF-beta receptor type- 100.0 6.5E-49 2.2E-53 429.7 22.1 269 683-975 3-298 (303)
29 2z7x_B TOLL-like receptor 1, v 100.0 1.8E-49 6.3E-54 472.5 18.5 452 73-590 4-486 (520)
30 3hyh_A Carbon catabolite-derep 100.0 9E-49 3.1E-53 417.8 21.8 249 682-967 12-262 (275)
31 2z81_A CD282 antigen, TOLL-lik 100.0 4E-49 1.4E-53 473.2 21.1 480 96-609 8-512 (549)
32 4ecn_A Leucine-rich repeat pro 100.0 5.7E-49 1.9E-53 483.9 22.1 460 93-584 323-863 (876)
33 4fie_A Serine/threonine-protei 100.0 1.4E-48 4.9E-53 438.8 22.3 249 683-967 151-400 (423)
34 2z7x_B TOLL-like receptor 1, v 100.0 3.9E-49 1.4E-53 469.7 15.7 451 96-609 3-483 (520)
35 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-48 4.9E-53 422.1 14.9 244 683-962 24-271 (304)
36 4g31_A Eukaryotic translation 100.0 5E-47 1.7E-51 412.4 16.8 252 682-967 4-279 (299)
37 4g8a_A TOLL-like receptor 4; l 100.0 5.3E-46 1.8E-50 454.4 27.8 520 60-589 34-584 (635)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.1E-46 2.1E-50 445.9 21.2 456 72-591 34-516 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.9E-46 2.7E-50 445.0 16.4 440 69-566 52-514 (562)
40 4b99_A Mitogen-activated prote 100.0 2.7E-45 9.2E-50 414.1 18.6 264 682-967 53-344 (398)
41 4f9c_A Cell division cycle 7-r 100.0 7.1E-44 2.4E-48 398.4 23.8 204 681-911 19-255 (361)
42 1jl5_A Outer protein YOPM; leu 100.0 1.8E-43 6.1E-48 410.2 22.7 407 91-589 9-433 (454)
43 3v5w_A G-protein coupled recep 100.0 1.2E-43 4.1E-48 415.7 20.1 255 682-967 188-449 (689)
44 3uto_A Twitchin; kinase, muscl 100.0 4.2E-43 1.4E-47 416.2 22.4 253 681-967 155-410 (573)
45 1jl5_A Outer protein YOPM; leu 100.0 1.4E-42 4.8E-47 402.6 22.7 424 69-572 11-439 (454)
46 2qkw_B Protein kinase; three-h 100.0 7.5E-42 2.6E-46 380.1 26.9 273 682-974 38-315 (321)
47 3uim_A Brassinosteroid insensi 100.0 1.3E-41 4.5E-46 379.1 22.8 283 674-973 20-310 (326)
48 3v47_A TOLL-like receptor 5B a 100.0 4.7E-42 1.6E-46 401.6 19.1 392 120-590 13-413 (455)
49 3v47_A TOLL-like receptor 5B a 100.0 1.4E-41 4.6E-46 397.7 22.3 364 93-470 30-412 (455)
50 2psq_A Fibroblast growth facto 100.0 6.4E-41 2.2E-45 379.3 24.1 261 683-975 81-365 (370)
51 1ogq_A PGIP-2, polygalacturona 100.0 9.2E-42 3.2E-46 377.0 16.1 291 22-320 3-302 (313)
52 3p86_A Serine/threonine-protei 100.0 7.1E-41 2.4E-45 369.3 22.1 263 682-977 36-301 (309)
53 3fxz_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 364.8 24.1 250 682-967 19-269 (297)
54 3s95_A LIMK-1, LIM domain kina 100.0 1.1E-40 3.6E-45 368.9 22.6 257 683-976 10-284 (310)
55 3lb7_A RAF proto-oncogene seri 100.0 2.6E-40 8.8E-45 364.6 24.5 265 682-976 35-302 (307)
56 2nru_A Interleukin-1 receptor- 100.0 6.9E-40 2.4E-44 361.9 27.6 269 688-974 36-306 (307)
57 3cbl_A C-FES, proto-oncogene t 100.0 5.2E-41 1.8E-45 381.4 17.4 260 683-975 114-375 (377)
58 3soc_A Activin receptor type-2 100.0 1.4E-40 4.7E-45 369.7 20.4 269 682-975 23-319 (322)
59 4eqm_A Protein kinase; transfe 100.0 2.9E-40 9.8E-45 362.1 22.5 267 682-977 10-278 (294)
60 3fe3_A MAP/microtubule affinit 100.0 1.8E-40 6.2E-45 368.5 21.1 250 682-968 14-265 (328)
61 3tt0_A Basic fibroblast growth 100.0 3.6E-40 1.2E-44 375.4 23.4 266 683-980 69-358 (382)
62 3kul_A Ephrin type-A receptor 100.0 4.6E-40 1.6E-44 365.8 23.3 261 683-976 49-315 (325)
63 4hcu_A Tyrosine-protein kinase 100.0 1.9E-40 6.5E-45 358.9 19.6 256 683-974 10-266 (269)
64 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-40 4.1E-45 376.8 18.6 266 683-980 71-351 (367)
65 3zgw_A Maternal embryonic leuc 100.0 2.2E-40 7.5E-45 369.8 20.0 252 681-968 8-261 (347)
66 2qol_A Ephrin receptor; recept 100.0 4.7E-40 1.6E-44 372.3 22.4 261 682-975 44-310 (373)
67 3tki_A Serine/threonine-protei 100.0 2.9E-40 9.9E-45 366.9 20.1 254 682-968 6-262 (323)
68 2yab_A Death-associated protei 100.0 9.6E-40 3.3E-44 367.0 23.9 257 681-967 10-272 (361)
69 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.1E-40 1.4E-44 356.0 20.1 257 683-975 8-265 (268)
70 3q4u_A Activin receptor type-1 100.0 4.7E-40 1.6E-44 362.2 20.8 262 682-972 7-300 (301)
71 3vhe_A Vascular endothelial gr 100.0 2.5E-40 8.7E-45 374.1 18.3 264 682-976 21-357 (359)
72 3niz_A Rhodanese family protei 100.0 8E-40 2.7E-44 361.5 21.8 263 682-967 20-300 (311)
73 1o6l_A RAC-beta serine/threoni 100.0 9.8E-40 3.4E-44 363.6 22.2 251 682-967 4-260 (337)
74 1luf_A Muscle-specific tyrosin 100.0 8.9E-40 3E-44 367.2 21.9 263 682-976 46-337 (343)
75 2ivs_A Proto-oncogene tyrosine 100.0 9.4E-40 3.2E-44 362.1 21.0 261 683-975 23-312 (314)
76 3poz_A Epidermal growth factor 100.0 9.2E-40 3.2E-44 363.9 21.0 258 683-974 15-278 (327)
77 1t46_A HOMO sapiens V-KIT hard 100.0 1E-39 3.5E-44 361.6 21.2 263 683-976 23-309 (313)
78 1rjb_A FL cytokine receptor; k 100.0 6.9E-40 2.4E-44 368.1 20.0 265 682-977 44-337 (344)
79 1tki_A Titin; serine kinase, m 100.0 6.8E-40 2.3E-44 363.4 19.6 251 682-967 4-257 (321)
80 3og7_A AKAP9-BRAF fusion prote 100.0 8.7E-40 3E-44 357.6 19.8 262 683-974 24-288 (289)
81 3kmu_A ILK, integrin-linked ki 100.0 1.3E-39 4.3E-44 352.7 20.9 254 683-974 10-270 (271)
82 4fr4_A YANK1, serine/threonine 100.0 2.5E-39 8.5E-44 365.5 23.3 253 682-967 14-271 (384)
83 3ugc_A Tyrosine-protein kinase 100.0 4.7E-40 1.6E-44 361.0 16.7 264 683-975 10-292 (295)
84 1qcf_A Haematopoetic cell kina 100.0 4E-40 1.4E-44 383.5 17.1 256 683-974 188-444 (454)
85 3soa_A Calcium/calmodulin-depe 100.0 2.9E-39 9.8E-44 372.7 23.9 255 681-967 9-267 (444)
86 3bz5_A Internalin-J, INLJ; leu 100.0 1.6E-39 5.4E-44 377.4 21.9 361 86-546 35-395 (457)
87 4euu_A Serine/threonine-protei 100.0 6.5E-39 2.2E-43 356.1 25.9 269 683-973 9-308 (319)
88 3bz5_A Internalin-J, INLJ; leu 100.0 7.2E-40 2.5E-44 380.2 18.9 358 109-591 34-393 (457)
89 3gen_A Tyrosine-protein kinase 100.0 9.5E-40 3.3E-44 356.2 18.7 258 682-975 23-281 (283)
90 2c30_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 357.6 23.9 247 685-967 47-294 (321)
91 2bdw_A Hypothetical protein K1 100.0 2.5E-39 8.5E-44 364.9 22.3 254 682-968 28-285 (362)
92 2y0a_A Death-associated protei 100.0 2.7E-39 9.2E-44 359.8 22.3 258 681-967 9-271 (326)
93 1csn_A Casein kinase-1; phosph 100.0 4E-39 1.4E-43 354.1 23.4 275 682-994 9-297 (298)
94 2i1m_A Macrophage colony-stimu 100.0 7.4E-40 2.5E-44 366.1 17.6 264 682-976 45-328 (333)
95 3qup_A Tyrosine-protein kinase 100.0 2.9E-39 9.9E-44 359.7 22.3 263 683-976 23-300 (323)
96 1ob3_A PFPK5, cell division co 100.0 1.6E-39 5.6E-44 355.3 19.7 263 683-967 2-280 (288)
97 1fot_A TPK1 delta, CAMP-depend 100.0 2.8E-39 9.6E-44 357.3 21.8 248 682-967 5-258 (318)
98 3op5_A Serine/threonine-protei 100.0 6.8E-40 2.3E-44 370.8 17.0 278 683-976 35-331 (364)
99 1k9a_A Carboxyl-terminal SRC k 100.0 3.8E-39 1.3E-43 374.5 23.4 251 683-974 193-445 (450)
100 3o0g_A Cell division protein k 100.0 3.8E-39 1.3E-43 353.1 22.1 263 683-967 2-282 (292)
101 1opk_A P150, C-ABL, proto-onco 100.0 1E-39 3.5E-44 383.5 18.7 256 683-973 220-477 (495)
102 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-39 3.6E-44 362.9 17.7 249 682-967 8-258 (336)
103 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-39 4.4E-44 378.7 18.9 256 683-974 184-440 (452)
104 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.6E-40 3.3E-44 366.1 17.1 251 682-967 22-280 (353)
105 3dtc_A Mitogen-activated prote 100.0 1.7E-39 5.7E-44 351.9 18.0 257 683-972 7-271 (271)
106 2izr_A Casein kinase I isoform 100.0 4.8E-39 1.6E-43 358.9 22.1 264 682-976 8-283 (330)
107 2eva_A TAK1 kinase - TAB1 chim 100.0 8E-39 2.7E-43 353.0 23.3 258 683-978 8-267 (307)
108 3gni_B Strad alpha; kinase fol 100.0 4.2E-39 1.4E-43 368.0 21.5 269 682-968 24-334 (389)
109 3kex_A Receptor tyrosine-prote 100.0 3.1E-39 1E-43 359.5 19.8 258 683-974 13-276 (325)
110 2pvf_A Fibroblast growth facto 100.0 5.2E-39 1.8E-43 359.2 21.7 264 682-977 34-321 (334)
111 1mp8_A Focal adhesion kinase 1 100.0 6.2E-39 2.1E-43 349.3 21.5 259 683-976 15-278 (281)
112 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.2E-39 1.4E-43 360.7 20.6 248 682-967 40-293 (350)
113 4dc2_A Protein kinase C IOTA t 100.0 3E-39 1E-43 366.0 19.6 251 682-962 51-307 (396)
114 3t9t_A Tyrosine-protein kinase 100.0 3.2E-39 1.1E-43 348.8 18.9 256 683-974 8-264 (267)
115 1kob_A Twitchin; kinase, intra 100.0 8.6E-39 2.9E-43 362.5 23.2 253 681-967 49-304 (387)
116 4aw2_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 370.5 19.7 258 682-967 73-338 (437)
117 3kfa_A Tyrosine-protein kinase 100.0 4E-39 1.4E-43 352.3 19.3 260 682-976 12-273 (288)
118 3uc3_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43 360.6 22.1 253 682-968 19-275 (361)
119 2xir_A Vascular endothelial gr 100.0 3.9E-39 1.3E-43 357.5 19.0 265 682-977 26-313 (316)
120 3dbq_A Dual specificity protei 100.0 4.1E-39 1.4E-43 361.3 19.3 253 683-968 9-274 (343)
121 3mdy_A Bone morphogenetic prot 100.0 3.3E-38 1.1E-42 353.4 26.5 270 681-976 35-333 (337)
122 3c1x_A Hepatocyte growth facto 100.0 7E-39 2.4E-43 362.2 21.2 261 685-978 91-359 (373)
123 2w4o_A Calcium/calmodulin-depe 100.0 9.1E-39 3.1E-43 358.7 21.6 250 682-967 52-305 (349)
124 2zv2_A Calcium/calmodulin-depe 100.0 9.6E-39 3.3E-43 351.1 21.1 266 682-967 12-292 (298)
125 1cm8_A Phosphorylated MAP kina 100.0 7.3E-39 2.5E-43 361.9 20.6 262 679-967 21-307 (367)
126 3kn6_A Ribosomal protein S6 ki 100.0 3.3E-39 1.1E-43 358.7 17.5 247 688-967 16-270 (325)
127 3v8s_A RHO-associated protein 100.0 3.3E-39 1.1E-43 367.8 17.8 256 682-968 68-330 (410)
128 1b6c_B TGF-B superfamily recep 100.0 1.3E-38 4.5E-43 357.5 22.4 268 680-976 39-338 (342)
129 1qpc_A LCK kinase; alpha beta 100.0 5.9E-39 2E-43 349.2 19.0 258 683-976 13-271 (279)
130 1fvr_A Tyrosine-protein kinase 100.0 1.1E-38 3.8E-43 355.5 21.6 282 683-999 25-325 (327)
131 2jii_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 362.7 18.2 263 683-977 42-339 (352)
132 3a8x_A Protein kinase C IOTA t 100.0 9.3E-39 3.2E-43 357.4 20.7 250 683-962 9-264 (345)
133 3pls_A Macrophage-stimulating 100.0 1.9E-38 6.5E-43 348.8 22.8 261 684-976 22-289 (298)
134 2y94_A 5'-AMP-activated protei 100.0 1.1E-38 3.7E-43 370.1 21.9 250 682-967 15-266 (476)
135 3gxj_A TGF-beta receptor type- 100.0 1.4E-40 4.9E-45 366.7 5.7 266 682-976 2-299 (303)
136 1xjd_A Protein kinase C, theta 100.0 3.1E-39 1E-43 360.6 16.5 250 682-966 16-268 (345)
137 2vd5_A DMPK protein; serine/th 100.0 3.4E-39 1.2E-43 368.0 17.2 256 682-967 60-327 (412)
138 3f66_A Hepatocyte growth facto 100.0 1.6E-38 5.6E-43 349.3 22.1 262 683-976 25-293 (298)
139 3lzb_A Epidermal growth factor 100.0 5.8E-39 2E-43 357.2 18.6 258 683-974 15-278 (327)
140 2zmd_A Dual specificity protei 100.0 9E-39 3.1E-43 364.1 20.5 253 683-968 56-321 (390)
141 2yex_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 343.8 22.9 254 681-967 5-261 (276)
142 2i0e_A Protein kinase C-beta I 100.0 1E-38 3.6E-43 357.4 20.5 251 682-967 19-276 (353)
143 3g33_A Cell division protein k 100.0 8.2E-39 2.8E-43 353.4 19.4 266 682-967 8-296 (308)
144 3c0i_A Peripheral plasma membr 100.0 1.6E-38 5.3E-43 357.3 21.7 258 682-967 23-286 (351)
145 3qd2_B Eukaryotic translation 100.0 7E-39 2.4E-43 358.0 18.7 252 682-967 5-325 (332)
146 2x4f_A Myosin light chain kina 100.0 1.6E-38 5.4E-43 359.6 21.8 251 688-972 94-349 (373)
147 2pmi_A Negative RE, cyclin-dep 100.0 3.1E-38 1.1E-42 349.9 23.7 261 682-967 4-293 (317)
148 3a62_A Ribosomal protein S6 ki 100.0 1.4E-38 4.8E-43 354.1 21.0 252 682-967 16-276 (327)
149 2acx_A G protein-coupled recep 100.0 1.3E-38 4.6E-43 373.6 21.8 255 683-967 184-444 (576)
150 4fvq_A Tyrosine-protein kinase 100.0 6.9E-39 2.4E-43 350.6 18.1 251 683-974 8-275 (289)
151 2v62_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 362.4 15.7 276 683-974 37-328 (345)
152 4f0f_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 344.6 23.3 258 683-972 19-287 (287)
153 3ork_A Serine/threonine protei 100.0 7.5E-39 2.5E-43 354.1 18.0 264 682-974 11-281 (311)
154 2yfx_A Tyrosine-protein kinase 100.0 1.2E-38 4.3E-43 355.1 19.9 263 682-976 29-306 (327)
155 3n9x_A Phosphotransferase; mal 100.0 2.3E-38 8E-43 366.1 22.8 207 676-903 19-252 (432)
156 2h34_A Serine/threonine-protei 100.0 2E-38 7E-43 350.2 21.3 265 681-976 32-298 (309)
157 3brb_A Proto-oncogene tyrosine 100.0 2.9E-38 9.9E-43 349.9 22.5 264 682-976 33-310 (313)
158 3kk8_A Calcium/calmodulin depe 100.0 3E-38 1E-42 344.6 22.2 253 682-967 5-261 (284)
159 1mqb_A Ephrin type-A receptor 100.0 4E-38 1.4E-42 351.5 23.7 262 683-977 44-312 (333)
160 3ttj_A Mitogen-activated prote 100.0 1.3E-38 4.3E-43 370.5 20.2 263 679-967 58-355 (464)
161 4eut_A Serine/threonine-protei 100.0 1.6E-38 5.5E-43 363.4 20.6 270 683-974 9-309 (396)
162 1p4o_A Insulin-like growth fac 100.0 1.6E-38 5.4E-43 353.6 20.0 261 682-974 24-299 (322)
163 4agu_A Cyclin-dependent kinase 100.0 3.4E-38 1.2E-42 349.0 22.4 263 682-967 2-284 (311)
164 1nxk_A MAP kinase-activated pr 100.0 2.1E-38 7E-43 362.2 20.9 251 681-968 59-322 (400)
165 2a2a_A Death-associated protei 100.0 3.9E-38 1.3E-42 350.0 22.5 257 681-967 10-272 (321)
166 2eue_A Carbon catabolite derep 100.0 2.5E-38 8.7E-43 343.4 20.4 249 682-967 12-262 (275)
167 2r5t_A Serine/threonine-protei 100.0 1E-38 3.4E-43 360.1 17.8 250 682-966 37-288 (373)
168 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.1E-38 1.1E-42 357.5 21.6 252 683-976 65-341 (365)
169 2wqm_A Serine/threonine-protei 100.0 5.8E-38 2E-42 347.0 23.2 268 681-977 30-300 (310)
170 2h8h_A Proto-oncogene tyrosine 100.0 5E-39 1.7E-43 381.1 15.7 256 683-974 267-523 (535)
171 4hgt_A Casein kinase I isoform 100.0 5.1E-38 1.7E-42 345.0 22.5 276 680-993 6-293 (296)
172 1u59_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42 344.0 21.5 260 684-977 10-275 (287)
173 3p1a_A MYT1 kinase, membrane-a 100.0 3.1E-38 1.1E-42 348.9 20.8 246 682-967 56-304 (311)
174 3hko_A Calcium/calmodulin-depe 100.0 3.6E-38 1.2E-42 354.3 21.6 268 675-967 18-330 (345)
175 3llt_A Serine/threonine kinase 100.0 3.6E-38 1.2E-42 356.5 21.4 258 682-967 34-355 (360)
176 3dls_A PAS domain-containing s 100.0 2.8E-38 9.5E-43 352.7 20.1 251 681-968 22-275 (335)
177 3is5_A Calcium-dependent prote 100.0 3.3E-38 1.1E-42 344.3 20.1 253 681-967 20-278 (285)
178 1o6v_A Internalin A; bacterial 100.0 5.9E-38 2E-42 367.2 23.5 150 402-563 240-389 (466)
179 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-37 3.8E-42 342.3 24.1 276 682-995 8-295 (296)
180 3f3z_A Calcium/calmodulin-depe 100.0 4.2E-38 1.4E-42 342.1 20.4 251 681-967 7-261 (277)
181 3cc6_A Protein tyrosine kinase 100.0 4.3E-38 1.5E-42 342.7 20.5 258 683-975 12-274 (281)
182 3fdn_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 343.2 19.6 250 682-968 8-258 (279)
183 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.3E-38 1.1E-42 369.9 20.9 255 683-966 185-447 (543)
184 1u5q_A Serine/threonine protei 100.0 2.8E-38 9.6E-43 354.2 19.5 249 683-968 54-306 (348)
185 3i6u_A CDS1, serine/threonine- 100.0 5.2E-38 1.8E-42 361.4 22.1 261 680-967 132-399 (419)
186 3g2f_A Bone morphogenetic prot 100.0 3.6E-38 1.2E-42 352.9 20.2 276 682-982 12-326 (336)
187 3oz6_A Mitogen-activated prote 100.0 4.2E-38 1.4E-42 359.4 21.1 266 680-968 6-329 (388)
188 1byg_A CSK, protein (C-termina 100.0 1.8E-38 6.2E-43 345.1 17.1 253 682-975 20-274 (278)
189 2a19_B Interferon-induced, dou 100.0 5.6E-38 1.9E-42 342.4 20.8 249 681-974 9-274 (284)
190 3lxl_A Tyrosine-protein kinase 100.0 1.3E-38 4.5E-43 354.9 16.0 266 683-977 23-306 (327)
191 2ozo_A Tyrosine-protein kinase 100.0 7.7E-38 2.6E-42 376.2 23.6 253 690-976 343-600 (613)
192 2buj_A Serine/threonine-protei 100.0 2.5E-38 8.4E-43 351.2 17.8 264 683-978 29-310 (317)
193 1xbb_A Tyrosine-protein kinase 100.0 4.6E-38 1.6E-42 344.3 19.7 260 683-976 16-281 (291)
194 1t4h_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 342.3 21.5 248 684-967 27-282 (290)
195 4e5w_A Tyrosine-protein kinase 100.0 3E-38 1E-42 347.9 18.2 263 683-973 21-301 (302)
196 3mtl_A Cell division protein k 100.0 1.1E-38 3.9E-43 354.6 14.9 261 683-967 2-281 (324)
197 2qr7_A Ribosomal protein S6 ki 100.0 2.3E-38 8E-43 353.7 17.4 253 680-967 19-277 (342)
198 4ejn_A RAC-alpha serine/threon 100.0 2E-38 6.7E-43 368.7 17.3 251 682-967 147-404 (446)
199 3rp9_A Mitogen-activated prote 100.0 9.9E-38 3.4E-42 364.5 23.1 200 679-899 49-280 (458)
200 3lxp_A Non-receptor tyrosine-p 100.0 5.4E-38 1.9E-42 348.3 19.8 263 685-977 33-313 (318)
201 3bhy_A Death-associated protei 100.0 9.6E-38 3.3E-42 340.4 21.4 262 682-973 4-273 (283)
202 3cok_A Serine/threonine-protei 100.0 9E-38 3.1E-42 339.6 21.1 252 682-967 10-262 (278)
203 2fst_X Mitogen-activated prote 100.0 1.9E-38 6.5E-43 358.1 15.7 262 679-968 25-312 (367)
204 2r3i_A Cell division protein k 100.0 6.3E-38 2.1E-42 344.8 19.3 265 682-967 2-283 (299)
205 2pml_X PFPK7, Ser/Thr protein 100.0 5.7E-38 2E-42 353.1 19.2 278 682-967 30-322 (348)
206 2id5_A Lingo-1, leucine rich r 100.0 8.7E-38 3E-42 367.5 21.5 326 287-612 33-361 (477)
207 1vzo_A Ribosomal protein S6 ki 100.0 2.3E-38 7.8E-43 356.5 15.7 257 683-968 54-322 (355)
208 2wtk_C Serine/threonine-protei 100.0 2.7E-37 9.3E-42 340.8 23.9 257 681-968 3-264 (305)
209 3lm5_A Serine/threonine-protei 100.0 8.4E-38 2.9E-42 348.1 20.0 255 682-967 27-287 (327)
210 4fl3_A Tyrosine-protein kinase 100.0 8.4E-38 2.9E-42 376.6 21.2 252 689-974 375-631 (635)
211 2ac3_A MAP kinase-interacting 100.0 1.2E-37 4.1E-42 345.5 20.8 258 683-967 12-295 (316)
212 4aaa_A Cyclin-dependent kinase 100.0 5.1E-38 1.8E-42 350.7 17.7 265 681-967 23-306 (331)
213 1o6v_A Internalin A; bacterial 100.0 2.8E-37 9.7E-42 361.4 24.8 217 353-587 173-390 (466)
214 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.7E-38 2.6E-42 348.7 18.9 264 681-967 32-318 (329)
215 3nsz_A CK II alpha, casein kin 100.0 8E-38 2.7E-42 349.2 19.0 252 682-967 35-319 (330)
216 2rku_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 341.8 19.8 252 682-968 14-266 (294)
217 2h6d_A 5'-AMP-activated protei 100.0 8E-38 2.8E-42 339.6 18.3 250 682-967 10-261 (276)
218 3mi9_A Cell division protein k 100.0 3.1E-37 1.1E-41 347.4 23.5 265 682-967 16-311 (351)
219 3kvw_A DYRK2, dual specificity 100.0 2.4E-37 8.1E-42 356.8 22.8 202 682-910 96-306 (429)
220 2y7j_A Phosphorylase B kinase 100.0 2.7E-37 9.4E-42 349.0 22.7 259 682-967 93-359 (365)
221 2w1i_A JAK2; chromosomal rearr 100.0 6.2E-38 2.1E-42 349.2 17.2 264 683-975 41-323 (326)
222 3mwu_A Calmodulin-domain prote 100.0 1.7E-37 5.9E-42 365.0 21.8 255 680-968 19-277 (486)
223 2owb_A Serine/threonine-protei 100.0 1.8E-37 6.3E-42 346.6 20.9 251 682-967 40-291 (335)
224 2jam_A Calcium/calmodulin-depe 100.0 1.7E-37 5.7E-42 342.2 20.3 251 681-967 7-261 (304)
225 2vwi_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 345.3 17.0 262 682-967 14-287 (303)
226 3nyv_A Calmodulin-domain prote 100.0 1.2E-37 4E-42 366.6 20.1 253 682-967 25-281 (484)
227 2vgo_A Serine/threonine-protei 100.0 1E-37 3.5E-42 340.3 18.2 249 682-967 13-262 (284)
228 2w5a_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 341.1 15.7 258 682-972 5-272 (279)
229 3sv0_A Casein kinase I-like; t 100.0 3.8E-37 1.3E-41 357.8 23.3 263 682-976 6-280 (483)
230 2xrw_A Mitogen-activated prote 100.0 1.9E-37 6.4E-42 351.5 20.2 261 680-967 22-318 (371)
231 1x8b_A WEE1HU, WEE1-like prote 100.0 8.4E-38 2.9E-42 341.7 16.8 246 682-967 10-279 (289)
232 3lij_A Calcium/calmodulin depe 100.0 2.7E-37 9.1E-42 363.9 22.2 258 681-972 35-298 (494)
233 1u46_A ACK-1, activated CDC42 100.0 5.4E-38 1.8E-42 343.9 15.2 261 683-974 18-284 (291)
234 1ua2_A CAK, cell division prot 100.0 1.7E-37 5.8E-42 348.6 19.2 268 682-968 9-292 (346)
235 2ycf_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 342.4 21.3 260 681-967 8-274 (322)
236 3eqc_A Dual specificity mitoge 100.0 1.8E-37 6.3E-42 350.6 18.8 200 683-906 33-233 (360)
237 4e7w_A Glycogen synthase kinas 100.0 2.1E-37 7.1E-42 353.6 19.3 257 683-967 40-321 (394)
238 3an0_A Dual specificity mitoge 100.0 3.4E-37 1.2E-41 345.5 20.4 253 682-967 50-310 (340)
239 2clq_A Mitogen-activated prote 100.0 8E-37 2.7E-41 335.3 22.9 251 683-967 22-278 (295)
240 3byv_A Rhoptry kinase; malaria 100.0 4.6E-38 1.6E-42 357.5 13.0 249 683-973 73-367 (377)
241 3com_A Serine/threonine-protei 100.0 5.9E-37 2E-41 339.6 21.5 250 682-967 28-278 (314)
242 3qyz_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41 348.3 20.2 263 681-967 25-313 (364)
243 3ll6_A Cyclin G-associated kin 100.0 2E-37 7E-42 346.9 17.8 257 683-976 28-310 (337)
244 3a7i_A MST3 kinase, serine/thr 100.0 7.9E-37 2.7E-41 336.7 21.9 249 682-968 21-271 (303)
245 3pg1_A Mitogen-activated prote 100.0 3.2E-37 1.1E-41 349.0 19.2 273 681-967 20-316 (362)
246 3eb0_A Putative uncharacterize 100.0 1.5E-37 5.1E-42 354.0 16.3 263 682-972 6-328 (383)
247 1blx_A Cyclin-dependent kinase 100.0 9.3E-37 3.2E-41 339.9 22.2 264 682-967 10-296 (326)
248 1phk_A Phosphorylase kinase; g 100.0 8.2E-37 2.8E-41 335.7 21.3 260 682-967 16-283 (298)
249 2x7f_A TRAF2 and NCK-interacti 100.0 3.8E-37 1.3E-41 343.1 18.8 251 682-967 23-286 (326)
250 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-37 3.8E-42 346.2 14.4 261 682-976 32-304 (319)
251 3pfq_A PKC-B, PKC-beta, protei 100.0 2.6E-37 8.9E-42 374.9 18.9 251 682-967 340-597 (674)
252 2j7t_A Serine/threonine-protei 100.0 2.7E-37 9.2E-42 340.3 17.3 253 681-967 17-275 (302)
253 3q5i_A Protein kinase; CDPK, m 100.0 6.4E-37 2.2E-41 361.6 21.6 264 681-967 34-301 (504)
254 3cek_A Dual specificity protei 100.0 4.7E-37 1.6E-41 340.1 19.2 253 683-968 28-293 (313)
255 3fme_A Dual specificity mitoge 100.0 5.5E-37 1.9E-41 335.7 19.4 253 683-967 7-266 (290)
256 2wei_A Calmodulin-domain prote 100.0 8.7E-37 3E-41 333.5 20.8 253 681-967 20-276 (287)
257 4exu_A Mitogen-activated prote 100.0 3.3E-37 1.1E-41 349.4 17.2 262 679-968 38-324 (371)
258 1z57_A Dual specificity protei 100.0 1.4E-36 4.7E-41 340.4 22.1 258 682-967 13-328 (339)
259 3coi_A Mitogen-activated prote 100.0 7.8E-37 2.7E-41 344.4 20.1 259 681-967 22-305 (353)
260 1wak_A Serine/threonine-protei 100.0 7.6E-37 2.6E-41 350.6 20.3 260 682-967 36-391 (397)
261 2b9h_A MAP kinase FUS3, mitoge 100.0 5.8E-37 2E-41 345.7 18.9 264 681-967 9-305 (353)
262 1j1b_A Glycogen synthase kinas 100.0 9.1E-37 3.1E-41 351.2 20.8 257 683-967 54-336 (420)
263 2id5_A Lingo-1, leucine rich r 100.0 1.1E-36 3.9E-41 358.0 20.9 302 239-564 33-335 (477)
264 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-37 5.5E-42 352.3 13.0 256 683-967 62-352 (371)
265 1zy4_A Serine/threonine-protei 100.0 9.3E-37 3.2E-41 336.0 18.7 253 681-967 4-283 (303)
266 2j0j_A Focal adhesion kinase 1 100.0 1.4E-36 4.7E-41 367.4 21.3 258 683-975 390-652 (656)
267 2vx3_A Dual specificity tyrosi 100.0 3.8E-36 1.3E-40 342.3 23.6 203 682-909 53-264 (382)
268 2i6l_A Mitogen-activated prote 100.0 1.2E-36 4.2E-41 337.9 18.9 264 680-967 8-305 (320)
269 3e3p_A Protein kinase, putativ 100.0 1.5E-36 5.2E-41 343.2 19.9 263 680-967 20-314 (360)
270 3rgf_A Cyclin-dependent kinase 100.0 6.5E-37 2.2E-41 351.6 16.7 263 683-968 20-334 (405)
271 3fhr_A MAP kinase-activated pr 100.0 9.5E-37 3.2E-41 340.7 17.6 256 678-967 23-287 (336)
272 2rio_A Serine/threonine-protei 100.0 4.1E-36 1.4E-40 347.3 19.0 250 685-967 17-295 (434)
273 2eu9_A Dual specificity protei 100.0 8.1E-36 2.8E-40 336.6 20.9 257 682-966 18-332 (355)
274 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-36 5.7E-41 334.9 14.1 257 358-616 51-313 (313)
275 1q8y_A SR protein kinase; tran 100.0 6.9E-36 2.4E-40 339.6 18.7 259 683-967 19-333 (373)
276 2dyl_A Dual specificity mitoge 100.0 1.9E-35 6.5E-40 328.1 21.5 253 682-967 24-283 (318)
277 3oja_B Anopheles plasmodium-re 100.0 7.4E-36 2.5E-40 360.2 19.6 333 237-611 50-384 (597)
278 3o6n_A APL1; leucine-rich repe 100.0 1.6E-35 5.3E-40 338.6 21.2 333 237-611 44-378 (390)
279 3p23_A Serine/threonine-protei 100.0 6.8E-36 2.3E-40 344.2 18.0 248 684-967 25-283 (432)
280 3aln_A Dual specificity mitoge 100.0 1.9E-35 6.6E-40 329.3 20.1 255 683-967 22-285 (327)
281 3o6n_A APL1; leucine-rich repe 100.0 1.7E-35 6E-40 338.2 18.1 351 44-443 3-353 (390)
282 3a99_A Proto-oncogene serine/t 100.0 4.2E-36 1.4E-40 333.3 12.6 246 682-967 42-293 (320)
283 2iwi_A Serine/threonine-protei 100.0 1E-35 3.4E-40 329.3 14.2 247 681-967 29-283 (312)
284 3qa8_A MGC80376 protein; kinas 100.0 1.8E-35 6.2E-40 350.0 15.1 268 682-974 13-309 (676)
285 3oja_B Anopheles plasmodium-re 100.0 1E-34 3.6E-39 350.1 18.9 312 91-444 49-360 (597)
286 3uqc_A Probable conserved tran 100.0 8.1E-35 2.8E-39 316.8 15.6 235 682-976 30-267 (286)
287 3dzo_A Rhoptry kinase domain; 100.0 2.2E-34 7.6E-39 330.5 16.4 242 684-967 79-363 (413)
288 3m2w_A MAP kinase-activated pr 100.0 5.1E-34 1.7E-38 313.4 18.6 231 679-967 13-256 (299)
289 4fcg_A Uncharacterized protein 100.0 1.2E-34 4.2E-39 321.8 12.0 275 19-299 21-314 (328)
290 2pzi_A Probable serine/threoni 100.0 4.1E-34 1.4E-38 349.7 16.2 240 683-973 80-327 (681)
291 4fmz_A Internalin; leucine ric 100.0 4.5E-33 1.5E-37 313.0 22.1 305 234-585 40-346 (347)
292 4fmz_A Internalin; leucine ric 100.0 5.4E-33 1.8E-37 312.4 22.6 308 208-562 38-346 (347)
293 2vuw_A Serine/threonine-protei 100.0 8.4E-34 2.9E-38 317.2 10.0 249 682-966 19-329 (336)
294 2ft3_A Biglycan; proteoglycan, 100.0 4E-32 1.4E-36 303.0 21.3 287 287-583 34-331 (332)
295 1xku_A Decorin; proteoglycan, 100.0 6.6E-32 2.2E-36 301.1 21.7 288 287-583 32-330 (330)
296 2ft3_A Biglycan; proteoglycan, 100.0 1E-31 3.5E-36 299.6 20.2 288 215-536 34-331 (332)
297 1xku_A Decorin; proteoglycan, 100.0 3.6E-31 1.2E-35 295.1 23.4 267 287-560 53-330 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.9E-35 9.9E-40 344.6 -17.8 379 189-587 3-442 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-35 4.6E-40 347.5 -21.3 387 164-570 2-448 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 5.8E-31 2E-35 296.3 9.7 284 54-374 27-318 (353)
301 3ogk_B Coronatine-insensitive 100.0 2.8E-33 9.7E-38 338.7 -14.3 409 109-564 65-528 (592)
302 2z80_A TOLL-like receptor 2, v 100.0 7.5E-30 2.6E-34 287.2 14.5 282 284-589 29-318 (353)
303 2z66_A Variable lymphocyte rec 100.0 1.6E-29 5.5E-34 278.5 14.4 231 333-564 28-263 (306)
304 2z66_A Variable lymphocyte rec 100.0 8.1E-30 2.8E-34 280.9 11.6 283 290-575 11-300 (306)
305 4fcg_A Uncharacterized protein 100.0 6.2E-29 2.1E-33 275.8 17.8 233 333-585 81-314 (328)
306 1wwl_A Monocyte differentiatio 100.0 3.8E-30 1.3E-34 284.0 4.2 249 329-587 39-311 (312)
307 1ozn_A Reticulon 4 receptor; N 100.0 2.8E-28 9.6E-33 265.6 17.2 257 289-572 14-271 (285)
308 1ozn_A Reticulon 4 receptor; N 100.0 1.5E-28 5.3E-33 267.7 14.2 251 337-591 15-267 (285)
309 3zyi_A Leucine-rich repeat-con 100.0 4.8E-28 1.7E-32 281.9 19.3 226 335-562 77-303 (452)
310 1wwl_A Monocyte differentiatio 100.0 2.5E-29 8.6E-34 277.4 7.9 251 282-563 39-310 (312)
311 3zyj_A Leucine-rich repeat-con 100.0 5.3E-28 1.8E-32 280.6 19.3 227 334-562 65-292 (440)
312 3zyi_A Leucine-rich repeat-con 100.0 4.9E-28 1.7E-32 281.9 18.7 249 336-589 57-307 (452)
313 3ogk_B Coronatine-insensitive 100.0 1E-31 3.5E-36 325.0 -13.0 429 56-514 41-526 (592)
314 3zyj_A Leucine-rich repeat-con 100.0 4.8E-28 1.6E-32 280.9 18.0 247 336-587 46-294 (440)
315 3o53_A Protein LRIM1, AGAP0063 99.9 1.1E-29 3.9E-34 280.9 2.1 263 313-589 14-280 (317)
316 3g06_A SSPH2 (leucine-rich rep 99.9 8.4E-27 2.9E-31 278.1 24.0 261 263-590 41-302 (622)
317 4azs_A Methyltransferase WBDD; 99.9 3E-28 1E-32 288.9 11.0 195 690-902 241-437 (569)
318 3o53_A Protein LRIM1, AGAP0063 99.9 6E-29 2E-33 275.1 3.7 267 240-567 12-281 (317)
319 3g06_A SSPH2 (leucine-rich rep 99.9 9.8E-27 3.3E-31 277.5 22.4 268 238-572 40-307 (622)
320 3oja_A Leucine-rich immune mol 99.9 5.5E-28 1.9E-32 282.9 7.1 233 333-579 34-269 (487)
321 3oja_A Leucine-rich immune mol 99.9 1.1E-27 3.7E-32 280.4 7.0 223 355-591 32-257 (487)
322 2o6q_A Variable lymphocyte rec 99.9 2.7E-26 9.3E-31 247.5 14.8 217 54-275 2-218 (270)
323 2p1m_B Transport inhibitor res 99.9 1.1E-30 3.8E-35 316.1 -23.3 455 56-561 34-543 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 1.5E-25 5.2E-30 242.7 17.0 207 383-590 30-242 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 2E-25 6.7E-30 241.8 16.6 209 357-566 28-241 (276)
326 3en9_A Glycoprotease, O-sialog 99.9 6.9E-26 2.4E-30 267.2 10.1 194 686-904 339-539 (540)
327 2p1m_B Transport inhibitor res 99.9 1.8E-29 6.1E-34 305.5 -23.1 404 112-561 61-518 (594)
328 3rfs_A Internalin B, repeat mo 99.9 1.7E-25 5.7E-30 241.6 10.5 182 402-591 60-241 (272)
329 2o6q_A Variable lymphocyte rec 99.9 3.1E-24 1.1E-28 231.4 19.1 201 359-562 18-218 (270)
330 3rfs_A Internalin B, repeat mo 99.9 7.8E-25 2.7E-29 236.3 14.0 187 377-572 59-245 (272)
331 1p9a_G Platelet glycoprotein I 99.9 7.1E-24 2.4E-28 230.6 14.9 133 451-585 75-208 (290)
332 1p9a_G Platelet glycoprotein I 99.9 9.8E-24 3.3E-28 229.5 15.6 203 353-562 6-208 (290)
333 4glp_A Monocyte differentiatio 99.9 3.6E-24 1.2E-28 235.9 12.0 223 358-586 65-308 (310)
334 2ast_B S-phase kinase-associat 99.9 8.3E-26 2.8E-30 252.4 -6.5 264 56-329 36-313 (336)
335 3m19_A Variable lymphocyte rec 99.9 4.6E-23 1.6E-27 219.6 14.7 158 406-563 36-193 (251)
336 3goz_A Leucine-rich repeat-con 99.9 3.8E-25 1.3E-29 249.4 -1.6 253 315-567 4-302 (362)
337 1h6u_A Internalin H; cell adhe 99.9 2.3E-23 8E-28 228.8 12.7 194 354-563 38-231 (308)
338 3m19_A Variable lymphocyte rec 99.9 7.7E-23 2.6E-27 217.9 15.9 209 405-617 14-231 (251)
339 4glp_A Monocyte differentiatio 99.9 2.5E-23 8.5E-28 229.2 11.9 205 333-563 91-308 (310)
340 2xwt_C Thyrotropin receptor; s 99.9 2.4E-23 8.3E-28 220.1 11.3 178 94-275 32-218 (239)
341 3goz_A Leucine-rich repeat-con 99.9 5.2E-25 1.8E-29 248.3 -2.7 254 338-591 3-303 (362)
342 2ca6_A RAN GTPase-activating p 99.9 1.9E-25 6.6E-30 254.4 -6.4 236 354-589 29-320 (386)
343 2xwt_C Thyrotropin receptor; s 99.9 6.2E-23 2.1E-27 217.0 12.9 178 358-562 32-218 (239)
344 2ca6_A RAN GTPase-activating p 99.9 9.9E-26 3.4E-30 256.8 -9.6 240 327-566 26-320 (386)
345 4ay9_X Follicle-stimulating ho 99.9 4.1E-22 1.4E-26 223.3 17.0 223 333-560 30-257 (350)
346 2o6s_A Variable lymphocyte rec 99.9 2.7E-22 9.3E-27 207.1 13.2 187 54-263 4-190 (208)
347 2ast_B S-phase kinase-associat 99.9 3.4E-24 1.2E-28 239.4 -1.8 229 333-591 70-312 (336)
348 1h6u_A Internalin H; cell adhe 99.9 3.5E-22 1.2E-26 219.4 14.0 192 332-539 40-231 (308)
349 4ay9_X Follicle-stimulating ho 99.9 6.1E-22 2.1E-26 221.9 12.3 222 55-292 7-232 (350)
350 2o6s_A Variable lymphocyte rec 99.9 2.6E-21 8.8E-26 199.7 14.6 162 382-550 29-190 (208)
351 1zar_A RIO2 kinase; serine kin 99.9 4.9E-22 1.7E-26 214.6 9.3 161 684-877 91-253 (282)
352 3cvr_A Invasion plasmid antige 99.8 3E-21 1E-25 227.3 14.3 166 382-572 81-253 (571)
353 3cvr_A Invasion plasmid antige 99.8 4.5E-21 1.6E-25 225.7 13.2 188 311-550 61-255 (571)
354 4b8c_D Glucose-repressible alc 99.8 8.2E-21 2.8E-25 232.2 4.5 228 24-272 131-369 (727)
355 1h6t_A Internalin B; cell adhe 99.8 1.4E-19 4.9E-24 196.7 13.7 151 401-563 64-214 (291)
356 1m9s_A Internalin B; cell inva 99.8 8.2E-20 2.8E-24 217.7 12.4 196 311-522 23-218 (605)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 9.3E-20 3.2E-24 189.5 10.8 153 408-563 14-167 (220)
358 1dce_A Protein (RAB geranylger 99.8 5.4E-22 1.8E-26 235.2 -7.2 203 354-579 346-567 (567)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 2.5E-19 8.5E-24 186.2 13.2 156 432-590 14-171 (220)
360 1m9s_A Internalin B; cell inva 99.8 2.6E-19 8.8E-24 213.4 13.8 159 401-571 61-219 (605)
361 2v9t_B SLIT homolog 2 protein 99.8 4.7E-19 1.6E-23 184.1 13.2 153 408-563 14-166 (220)
362 3e6j_A Variable lymphocyte rec 99.8 3.3E-19 1.1E-23 186.7 11.5 161 53-230 15-175 (229)
363 1dce_A Protein (RAB geranylger 99.8 2.2E-21 7.6E-26 229.8 -5.7 175 115-302 347-549 (567)
364 1h6t_A Internalin B; cell adhe 99.8 2.1E-19 7.1E-24 195.5 9.9 172 354-539 43-214 (291)
365 2xot_A Amphoterin-induced prot 99.8 4.4E-19 1.5E-23 199.5 11.9 162 361-525 22-187 (361)
366 4b8c_D Glucose-repressible alc 99.8 1.1E-19 3.7E-24 222.3 7.0 161 388-559 208-369 (727)
367 2xot_A Amphoterin-induced prot 99.8 2.9E-19 9.9E-24 201.0 9.8 173 409-585 22-202 (361)
368 3e6j_A Variable lymphocyte rec 99.8 2.4E-18 8.3E-23 180.0 14.1 135 454-589 41-176 (229)
369 2v9t_B SLIT homolog 2 protein 99.8 2.1E-18 7.3E-23 179.1 12.9 132 407-538 34-165 (220)
370 1xeu_A Internalin C; cellular 99.8 6.8E-19 2.3E-23 188.3 8.3 170 332-516 18-187 (263)
371 1w8a_A SLIT protein; signaling 99.7 2E-18 7E-23 175.2 10.7 153 456-611 11-166 (192)
372 1xeu_A Internalin C; cellular 99.7 9.1E-19 3.1E-23 187.3 8.2 170 380-564 18-187 (263)
373 4ezg_A Putative uncharacterize 99.7 2E-18 6.9E-23 176.2 9.4 153 402-562 41-194 (197)
374 1w8a_A SLIT protein; signaling 99.7 8.4E-18 2.9E-22 170.7 10.5 113 454-566 30-143 (192)
375 1zth_A RIO1 serine protein kin 99.7 6.1E-18 2.1E-22 180.3 9.3 153 685-851 49-219 (258)
376 4ezg_A Putative uncharacterize 99.7 1.7E-17 5.7E-22 169.3 11.3 132 401-538 62-194 (197)
377 3sb4_A Hypothetical leucine ri 99.7 1.4E-17 4.9E-22 184.7 3.4 101 357-459 226-327 (329)
378 2ell_A Acidic leucine-rich nuc 99.7 1.8E-16 6.2E-21 157.1 10.0 132 405-538 24-160 (168)
379 2wfh_A SLIT homolog 2 protein 99.7 2.4E-16 8.3E-21 159.8 10.7 128 456-587 13-141 (193)
380 3sb4_A Hypothetical leucine ri 99.6 3E-17 1E-21 182.1 4.1 100 285-390 48-157 (329)
381 2ell_A Acidic leucine-rich nuc 99.6 2E-16 6.9E-21 156.8 8.5 132 429-562 24-160 (168)
382 4gyi_A RIO2 kinase; protein ki 99.6 1.7E-16 5.7E-21 174.9 5.4 151 685-852 97-266 (397)
383 2je0_A Acidic leucine-rich nuc 99.6 3.6E-16 1.2E-20 151.5 7.2 127 405-557 17-148 (149)
384 2je0_A Acidic leucine-rich nuc 99.6 4.6E-16 1.6E-20 150.8 7.8 129 380-533 16-148 (149)
385 2wfh_A SLIT homolog 2 protein 99.6 1.5E-15 5E-20 154.0 11.5 110 453-563 31-140 (193)
386 2o6r_A Variable lymphocyte rec 99.6 1E-15 3.5E-20 153.2 10.2 133 455-590 9-142 (177)
387 2o6r_A Variable lymphocyte rec 99.6 1.9E-15 6.7E-20 151.1 10.5 114 453-566 28-141 (177)
388 4fdw_A Leucine rich hypothetic 99.6 2.6E-14 9E-19 161.7 16.2 256 229-514 127-383 (401)
389 4fdw_A Leucine rich hypothetic 99.6 2.3E-14 7.9E-19 162.2 15.1 248 280-562 130-383 (401)
390 1ds9_A Outer arm dynein; leuci 99.5 4.1E-17 1.4E-21 166.6 -7.3 111 451-567 46-158 (198)
391 1ds9_A Outer arm dynein; leuci 99.5 9.6E-17 3.3E-21 163.8 -5.6 155 401-562 14-185 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.5 8.6E-15 2.9E-19 146.2 7.5 133 401-562 15-153 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.5 6.1E-15 2.1E-19 147.2 6.4 133 448-586 14-154 (176)
394 4fs7_A Uncharacterized protein 99.5 9.9E-14 3.4E-18 157.8 17.3 315 105-460 59-373 (394)
395 4fs7_A Uncharacterized protein 99.5 1.8E-13 6.2E-18 155.6 18.2 335 81-458 59-393 (394)
396 3g39_A Variable lymphocyte rec 99.5 6.3E-14 2.2E-18 138.8 9.1 105 456-563 12-116 (170)
397 3g39_A Variable lymphocyte rec 99.4 1.1E-13 3.7E-18 137.1 8.6 110 478-590 10-120 (170)
398 2r9u_A Variable lymphocyte rec 99.4 1.6E-13 5.3E-18 136.4 9.2 105 456-563 15-119 (174)
399 2r9u_A Variable lymphocyte rec 99.4 2.9E-13 1E-17 134.4 10.1 110 61-178 9-118 (174)
400 2ifg_A High affinity nerve gro 99.3 2.7E-12 9.4E-17 143.2 9.2 102 483-586 14-117 (347)
401 3un9_A NLR family member X1; l 99.3 1.8E-14 6.3E-19 161.4 -8.9 159 405-563 72-253 (372)
402 4gt6_A Cell surface protein; l 99.3 5.9E-11 2E-15 134.8 16.8 90 107-198 53-146 (394)
403 4gt6_A Cell surface protein; l 99.2 5.3E-11 1.8E-15 135.1 15.8 334 84-466 54-391 (394)
404 3un9_A NLR family member X1; l 99.2 1.1E-13 3.8E-18 155.0 -7.6 188 357-564 72-285 (372)
405 2ifg_A High affinity nerve gro 99.2 8.4E-12 2.9E-16 139.3 7.5 104 457-563 12-117 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 5.6E-11 1.9E-15 126.9 10.5 145 681-850 12-213 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 2E-10 7E-15 122.3 7.6 129 692-850 29-214 (264)
408 3dxp_A Putative acyl-COA dehyd 98.9 4.2E-09 1.5E-13 117.8 12.1 144 687-851 42-249 (359)
409 4h09_A Hypothetical leucine ri 98.9 2.1E-08 7.3E-13 113.0 16.2 147 398-549 210-356 (379)
410 2ra8_A Uncharacterized protein 98.9 3.3E-10 1.1E-14 125.6 1.1 85 499-583 250-341 (362)
411 4h09_A Hypothetical leucine ri 98.9 2.3E-08 7.8E-13 112.8 15.8 109 352-463 235-343 (379)
412 2ra8_A Uncharacterized protein 98.8 7.4E-10 2.5E-14 122.8 1.8 155 401-560 168-341 (362)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 3.8E-09 1.3E-13 115.2 7.4 187 688-903 25-287 (304)
414 3rw6_A Nuclear RNA export fact 98.7 1.6E-10 5.5E-15 121.3 -7.3 160 56-220 77-257 (267)
415 3r70_A Aminoglycoside phosphot 98.5 4.3E-07 1.5E-11 99.6 12.8 138 684-852 38-239 (320)
416 3rw6_A Nuclear RNA export fact 98.5 1.5E-08 5E-13 106.4 -1.0 16 550-565 221-236 (267)
417 1io0_A Tropomodulin; LRR prote 98.3 3.6E-08 1.2E-12 98.6 -2.0 112 450-561 33-163 (185)
418 4gkh_A Aminoglycoside 3'-phosp 98.3 2.5E-06 8.5E-11 91.0 11.9 135 690-850 31-223 (272)
419 3tdw_A Gentamicin resistance p 98.3 5.2E-06 1.8E-10 90.1 13.6 137 688-851 24-225 (306)
420 3d1u_A Putative fructosamine-3 98.3 2.7E-06 9.3E-11 91.2 11.1 75 688-783 20-97 (288)
421 1io0_A Tropomodulin; LRR prote 98.3 9.5E-08 3.3E-12 95.4 -0.5 119 400-538 31-164 (185)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 8.2E-06 2.8E-10 90.7 10.5 143 687-852 45-245 (362)
423 3ats_A Putative uncharacterize 98.0 8.5E-06 2.9E-10 90.7 8.6 83 689-785 26-122 (357)
424 2q83_A YTAA protein; 2635576, 97.8 9.2E-05 3.1E-09 81.7 11.8 30 820-849 222-251 (346)
425 3jr1_A Putative fructosamine-3 97.8 0.00012 4.2E-09 78.9 12.2 137 688-846 41-232 (312)
426 2olc_A MTR kinase, methylthior 97.6 0.00015 5.3E-09 81.7 10.8 82 688-781 35-120 (397)
427 3f7w_A Putative fructosamine-3 97.5 0.00034 1.1E-08 75.0 10.5 77 686-783 18-97 (288)
428 3e4g_A ATP synthase subunit S, 97.5 1.8E-05 6.1E-10 76.8 0.3 82 119-200 63-150 (176)
429 3e4g_A ATP synthase subunit S, 97.3 5.4E-05 1.9E-09 73.4 1.8 83 429-511 61-149 (176)
430 2pyw_A Uncharacterized protein 97.2 0.0015 5.1E-08 74.1 11.8 78 820-899 232-312 (420)
431 3dxq_A Choline/ethanolamine ki 97.1 0.0014 4.8E-08 70.6 10.0 129 688-851 23-203 (301)
432 3csv_A Aminoglycoside phosphot 97.1 0.0014 4.7E-08 71.9 9.8 33 820-852 183-219 (333)
433 1nw1_A Choline kinase (49.2 KD 96.8 0.002 6.9E-08 73.0 7.9 72 689-783 79-159 (429)
434 1zyl_A Hypothetical protein YI 96.7 0.0079 2.7E-07 65.5 12.1 141 689-850 32-223 (328)
435 2yle_A Protein spire homolog 1 96.7 0.011 3.9E-07 58.5 11.6 104 781-903 33-136 (229)
436 2ppq_A HSK, HK, homoserine kin 96.7 0.0032 1.1E-07 68.5 8.5 142 689-850 28-217 (322)
437 3feg_A Choline/ethanolamine ki 96.5 0.0054 1.9E-07 67.8 9.2 140 689-850 56-254 (379)
438 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00039 1.3E-08 68.7 -0.4 17 545-561 153-169 (197)
439 2qg7_A Ethanolamine kinase PV0 96.4 0.008 2.7E-07 68.4 10.2 74 688-783 113-188 (458)
440 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00044 1.5E-08 68.3 -0.2 60 525-584 98-169 (197)
441 3rfe_A Platelet glycoprotein I 96.4 0.0025 8.6E-08 58.8 4.9 35 527-561 33-67 (130)
442 3rfe_A Platelet glycoprotein I 96.4 0.0054 1.8E-07 56.5 6.7 56 73-130 12-68 (130)
443 3c5i_A Choline kinase; choline 96.3 0.0086 2.9E-07 66.5 9.1 73 689-783 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 96.2 0.023 7.8E-07 62.1 11.9 32 820-851 206-237 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.1 0.041 1.4E-06 61.1 8.6 154 689-850 58-280 (401)
446 3mes_A Choline kinase; malaria 94.7 0.1 3.5E-06 58.4 10.3 139 689-850 76-291 (424)
447 3g15_A CK, chetk-alpha, cholin 89.2 0.62 2.1E-05 51.9 7.7 30 821-850 245-280 (401)
448 4ano_A ESSB; membrane protein, 83.4 3 0.0001 41.4 8.1 84 754-849 48-132 (219)
449 2ks1_B Epidermal growth factor 81.7 0.4 1.4E-05 33.9 0.7 16 641-656 26-41 (44)
450 4ann_A ESSB; membrane protein, 81.0 2.9 0.0001 41.3 7.0 122 746-903 36-157 (215)
451 3cxl_A N-chimerin; SH2, RHO-GA 68.7 0.72 2.5E-05 52.3 -1.2 63 687-767 146-215 (463)
452 2l2t_A Receptor tyrosine-prote 66.8 1.1 3.7E-05 31.6 -0.1 17 641-657 25-41 (44)
453 2k1k_A Ephrin type-A receptor 52.4 2.8 9.5E-05 28.6 -0.1 23 631-653 16-38 (38)
454 2lz0_A Uncharacterized protein 37.9 46 0.0016 28.2 5.3 42 108-150 11-52 (100)
455 1cja_A Protein (actin-fragmin 35.4 87 0.003 33.0 7.9 78 770-851 156-238 (342)
456 2lz0_A Uncharacterized protein 35.3 72 0.0025 27.0 6.1 50 78-128 5-54 (100)
457 2jwa_A Receptor tyrosine-prote 28.6 11 0.00037 26.5 -0.2 14 641-654 25-39 (44)
458 3ls8_A Phosphatidylinositol 3- 25.8 5.3E+02 0.018 29.7 12.9 83 759-849 402-501 (614)
459 2k1a_A Integrin alpha-IIB; sin 24.2 19 0.00064 25.1 0.3 24 628-651 10-33 (42)
460 3ox7_P MH027; urokinase-type p 20.9 22 0.00075 20.1 0.1 9 55-63 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.5e-84 Score=801.99 Aligned_cols=592 Identities=34% Similarity=0.536 Sum_probs=466.2
Q ss_pred CCCCchHHHHHHHHHHHhccCCccccCCCCCCCCCCCCCccceeEEeCCCCeEEEEEcCCCCcCCC---CC---------
Q 001867 19 PSLSLNQEGLYLERVKLSLSDPDSALSSWGRNPRDDSPCSWRGVECDPRSHSVASIDLSNANIAGP---FP--------- 86 (1002)
Q Consensus 19 ~~~~~~~~~~~l~~~k~~~~d~~~~l~sw~~~~~~~~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~---~~--------- 86 (1002)
++.+.++|++||++||+++.||. .+++|+ .+.+||+|.||+|+ +++|+.|||+++++.|. +|
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~-~l~~W~---~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKN-LLPDWS---SNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTT-SSTTCC---TTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred cccCCHHHHHHHHHHHhhCCCcc-cccCCC---CCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 34457789999999999999998 999996 34689999999999 68999999999998876 33
Q ss_pred --------------ccccCCCCCCEEeccCCCCCCCCCC--CccccCcccccccccccccCCCCccc-cccCCccccccc
Q 001867 87 --------------SLLCRLENLTFLTLFNNSINSTLPD--DISACQNLQHLDLSQNLLTGTLTPAL-ADLPNLKFLDLT 149 (1002)
Q Consensus 87 --------------~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~L~~L~~L~Ls 149 (1002)
..|+.+++|++|+|++|.+++.+|. .|+.+++|++|+|++|.+++.+|..+ .++++|++|+|+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 5788889999999999999888888 88889999999999888887776654 444555555544
Q ss_pred cccccCCCCcc-------------------------cccccccceeeeccccccCccccccccccccccccccCCCCCCC
Q 001867 150 GNNFSGDIPES-------------------------FGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPG 204 (1002)
Q Consensus 150 ~N~l~~~~p~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~ 204 (1002)
+|++++..|.. +..+++|++|+|++|++++.+|. ++++++|++|+|++|++ .+
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l-~~ 237 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL-SG 237 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCC-CS
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcC-CC
Confidence 44444332221 13344444444555555444444 44455555555555443 23
Q ss_pred CCCcccC----------------------CCCccchhhccCcccccccccccccc-cccchhcccCcccccccCcccccc
Q 001867 205 RIPPELG----------------------NLTNLEILWLTECNLVGEIPDSLGRL-AKLVDLDLALNNLVGAIPSSLTEL 261 (1002)
Q Consensus 205 ~~p~~~~----------------------~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~l~~l 261 (1002)
.+|..++ .+++|++|++++|++++.+|..+... ++|++|+|++|++++.+|..|.++
T Consensus 238 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 238 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp CHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 3333344 44455555555555555666666554 777777777777777777777777
Q ss_pred cceeeeeccCCcccCCCCCc-cccccccceeeccccccCCCCCccCCCC--CcceeecCCCcccCcCCcccCC--Ccccc
Q 001867 262 ASVVQIELYNNSLTGDLPTG-WSNLTSLRLLDASMNDLTGPIPDDLTRL--PLESLNLYENRLEGSLPATIAD--SPGLY 336 (1002)
Q Consensus 262 ~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~L~~N~l~~~~p~~~~~--l~~L~ 336 (1002)
++|+.|++++|++.+.+|.. +.++++|++|++++|++++.+|..+..+ .|+.|++++|++++.+|..+.. +++|+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 77777777777777666654 7777777777777777777777666554 4777777777777777777666 67788
Q ss_pred hhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCcc
Q 001867 337 ELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNR 416 (1002)
Q Consensus 337 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 416 (1002)
+|++++|++++.+|..+..+++|++|+|++|++++.+|..+..+++|+.|++++|.+++.+|..++.+++|++|+|++|+
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCccc
Q 001867 417 LTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPES 496 (1002)
Q Consensus 417 l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 496 (1002)
+++.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|++++|+++|.+|..
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888777754
Q ss_pred c----------------------------------------------------------------------cccccCCee
Q 001867 497 L----------------------------------------------------------------------TNLAELGSL 506 (1002)
Q Consensus 497 ~----------------------------------------------------------------------~~l~~L~~L 506 (1002)
+ +.+++|+.|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 3 346789999
Q ss_pred ecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCc
Q 001867 507 DLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLS 585 (1002)
Q Consensus 507 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~ 585 (1002)
||++|+++|.+|..|+++++|+.|+|++|+++|.+|+.|+++++|++|||++|+|+|.||..++.+ .|++||||+|+|+
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 7999999999999
Q ss_pred CCCChh-hhhhcccccccCCCCCCCCCCCCCCCC
Q 001867 586 GELPSL-FAKEMYRNSFLGNPGLCGDLEGLCDGR 618 (1002)
Q Consensus 586 g~~p~~-~~~~~~~~~~~~n~~~cg~~~~~c~~~ 618 (1002)
|.||.. .+.++...+|.|||++||.|...|...
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred ccCCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 999986 677888899999999999999999753
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.1e-67 Score=648.50 Aligned_cols=515 Identities=33% Similarity=0.508 Sum_probs=435.5
Q ss_pred CeEEEEEcCCCCcCCCCCccc-cCCCCCCEEeccCCCCCCCCCCC---cccc----------------------Cccccc
Q 001867 69 HSVASIDLSNANIAGPFPSLL-CRLENLTFLTLFNNSINSTLPDD---ISAC----------------------QNLQHL 122 (1002)
Q Consensus 69 ~~v~~l~L~~~~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~p~~---~~~l----------------------~~L~~L 122 (1002)
.+++.|||++|.+++..|..+ .++++|++|+|++|++++..|.. +.++ ++|++|
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L 205 (768)
T 3rgz_A 126 SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205 (768)
T ss_dssp TTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEE
T ss_pred CCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEE
Confidence 356777777777776666554 66666777777666666555544 4444 455555
Q ss_pred ccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCC
Q 001867 123 DLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFL 202 (1002)
Q Consensus 123 ~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~ 202 (1002)
+|++|.+++.+|. ++++++|++|+|++|++++.+|..|+.+++|++|+|++|++++.+|.. .+++|++|+|++|++
T Consensus 206 ~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l- 281 (768)
T 3rgz_A 206 DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKF- 281 (768)
T ss_dssp ECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEE-
T ss_pred ECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCcc-
Confidence 5555555544443 555555555555555555555555555555555555555555444443 455555555555553
Q ss_pred CCCCCcccCCC-CccchhhccCcccccccccccccccccchhcccCcccccccCcc-cccccceeeeeccCCcccCCCCC
Q 001867 203 PGRIPPELGNL-TNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSS-LTELASVVQIELYNNSLTGDLPT 280 (1002)
Q Consensus 203 ~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~ 280 (1002)
.+.+|..+..+ ++|++|++++|++++.+|..|+.+++|++|+|++|++++.+|.. +.++++|++|++++|++++.+|.
T Consensus 282 ~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~ 361 (768)
T 3rgz_A 282 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE 361 (768)
T ss_dssp EESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCT
T ss_pred CCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccH
Confidence 34778888775 99999999999999999999999999999999999999888876 99999999999999999999999
Q ss_pred cccccc-ccceeeccccccCCCCCccCCC--C-CcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCC
Q 001867 281 GWSNLT-SLRLLDASMNDLTGPIPDDLTR--L-PLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKN 356 (1002)
Q Consensus 281 ~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~--~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 356 (1002)
.+.+++ +|+.|++++|++++.+|..+.. . .|+.|++++|++++.+|..+.++++|++|++++|++++.+|..+..+
T Consensus 362 ~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 441 (768)
T 3rgz_A 362 SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441 (768)
T ss_dssp THHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC
T ss_pred HHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcC
Confidence 999998 9999999999999988888776 3 49999999999999999999999999999999999999999999999
Q ss_pred CCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEc
Q 001867 357 SPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLEL 436 (1002)
Q Consensus 357 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 436 (1002)
++|+.|+|++|++++.+|..+..+++|++|++++|.+++.+|..++++++|++|+|++|++++.+|.+++.+++|+.|+|
T Consensus 442 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 521 (768)
T 3rgz_A 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCccccccccCCcccEEEccCCcCCCCCccccc------------------------------------------
Q 001867 437 TDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIG------------------------------------------ 474 (1002)
Q Consensus 437 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------------------------------------------ 474 (1002)
++|++++.+|..+..+++|+.|++++|+++|.+|.++.
T Consensus 522 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (768)
T 3rgz_A 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRS 601 (768)
T ss_dssp CSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCG
T ss_pred CCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999988886543
Q ss_pred ----------------------------cccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccc
Q 001867 475 ----------------------------FLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKK 526 (1002)
Q Consensus 475 ----------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 526 (1002)
.+++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..|+++++
T Consensus 602 ~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~ 681 (768)
T 3rgz_A 602 EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681 (768)
T ss_dssp GGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred hhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCC
Confidence 3577899999999999999999999999999999999999999999999999
Q ss_pred cccccccCcccccCCCCCccccccccEEeCcceeeecccCCcccccccceEEecccc-CcCC
Q 001867 527 LNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNLKLNQLNVSNNR-LSGE 587 (1002)
Q Consensus 527 L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~L~~l~ls~N~-l~g~ 587 (1002)
|+.|||++|+++|.+|..++++++|++|||++|+|+|.||...+-.++....+.+|+ |+|.
T Consensus 682 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 682 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred CCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 999999999999999999999999999999999999999987544466666777774 7774
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-61 Score=596.96 Aligned_cols=553 Identities=22% Similarity=0.219 Sum_probs=484.5
Q ss_pred CCccceeEEeCC---------CCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCccccccccc
Q 001867 56 PCSWRGVECDPR---------SHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQ 126 (1002)
Q Consensus 56 ~C~w~gv~C~~~---------~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 126 (1002)
.|.+..|.|+.. ..+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 356666777531 35799999999999998888999999999999999999999999999999999999999
Q ss_pred ccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCC
Q 001867 127 NLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRI 206 (1002)
Q Consensus 127 N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~ 206 (1002)
|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|.+ .+..
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l-~~~~ 161 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKI-QALK 161 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCC-CCBC
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcc-cccC
Confidence 999977666899999999999999999988889999999999999999999999999999999999999999987 3444
Q ss_pred CcccC--CCCccchhhccCcccccccccccccc---------------------------cccchhcccCcccccccCcc
Q 001867 207 PPELG--NLTNLEILWLTECNLVGEIPDSLGRL---------------------------AKLVDLDLALNNLVGAIPSS 257 (1002)
Q Consensus 207 p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~~~~~~~ 257 (1002)
+..+. .+++|++|++++|++++..|..|..+ ++|+.|++++|.+++..|..
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 44443 56899999999999998888877765 45677888888888888888
Q ss_pred cccccc--eeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCC-cceeecCCCcccC-----cCCc--
Q 001867 258 LTELAS--VVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLP-LESLNLYENRLEG-----SLPA-- 327 (1002)
Q Consensus 258 l~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~L~~N~l~~-----~~p~-- 327 (1002)
|.++.. |+.|++++|++.+..|..|..+++|++|++++|++++..|..+..++ |+.|++++|...+ .+|.
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 988866 99999999999988888999999999999999999988888888775 9999999876553 2333
Q ss_pred --ccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCC--CChhhhcc--CcccceeeeccccccCCCCcC
Q 001867 328 --TIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGE--IPASLCEK--GELEELLMIYNSFTGQLPDGL 401 (1002)
Q Consensus 328 --~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l--~~L~~L~l~~N~l~~~~p~~l 401 (1002)
.|..+++|++|++++|++.+..+..|..+++|++|++++|.++.. .+..|..+ .+|+.|++++|++++..|..+
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~ 401 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF 401 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhh
Confidence 788899999999999999999999999999999999999986532 22334333 589999999999999999999
Q ss_pred cCCCCCcEEEccCccccCCCC-CcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCC--CCCccccccccc
Q 001867 402 GHCQSLTRVRLGYNRLTGKVP-PLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLS--GSLPEEIGFLKS 478 (1002)
Q Consensus 402 ~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~ 478 (1002)
..+++|++|+|++|++++.+| ..|.++++|+.|++++|++.+..+..|..+++|+.|++++|.+. +.+|..++.+++
T Consensus 402 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~ 481 (680)
T 1ziw_A 402 SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481 (680)
T ss_dssp TTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTT
T ss_pred hCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCC
Confidence 999999999999999987666 68899999999999999999999999999999999999999987 578999999999
Q ss_pred cccccccccccCCCCcccccccccCCeeecCCCcCCcccc--------cccccccccccccccCcccccCCC-CCccccc
Q 001867 479 LVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELP--------SSVSSWKKLNELNLADNLFYGNIP-EDIGNLS 549 (1002)
Q Consensus 479 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~ip-~~~~~l~ 549 (1002)
|+.|++++|++++..|..|..+++|+.|+|++|++++..+ ..|+.+++|+.|+|++|+++ .+| ..|.+++
T Consensus 482 L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~ 560 (680)
T 1ziw_A 482 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLF 560 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCT
T ss_pred CCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHccccc
Confidence 9999999999998888889999999999999999997532 34789999999999999999 555 4689999
Q ss_pred cccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChhh---hhhcccccccCCCCCCCC
Q 001867 550 VLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSLF---AKEMYRNSFLGNPGLCGD 610 (1002)
Q Consensus 550 ~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~~---~~~~~~~~~~~n~~~cg~ 610 (1002)
+|+.|||++|++++..|..+..+ +|+.|+|++|+|++.+|..+ ...+....+.||||.|+-
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 99999999999997666667888 89999999999999887642 456778889999999973
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.2e-59 Score=566.00 Aligned_cols=526 Identities=21% Similarity=0.200 Sum_probs=448.3
Q ss_pred EEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccc
Q 001867 74 IDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNF 153 (1002)
Q Consensus 74 l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l 153 (1002)
++.++.+++ .+|..+.. ++++|+|++|.|+++.|.+|.++++|++|+|++|.+++..|..|+++++|++|+|++|++
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 455666666 45555543 789999999999998899999999999999999999988899999999999999999999
Q ss_pred cCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccc
Q 001867 154 SGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDS 233 (1002)
Q Consensus 154 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 233 (1002)
++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|++.....|..+ .+++|++|++++|++++..|..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF-PTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTC-CCTTCCEEECCSSCCCEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCccccc-CCcccCEEEcccCcccccChhh
Confidence 988899999999999999999999988888899999999999999997433445444 4999999999999999888999
Q ss_pred cccccccc--hhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCC--------CCC
Q 001867 234 LGRLAKLV--DLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTG--------PIP 303 (1002)
Q Consensus 234 ~~~l~~L~--~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--------~~p 303 (1002)
|+.+++|+ .|++++|.+++..|..+.. .+|+.|++++|. ..+..+..+.++....+..+.+.+ ...
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHh
Confidence 99999999 8999999999888877765 689999999987 234445555555444443333221 112
Q ss_pred ccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcc
Q 001867 304 DDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGEL 383 (1002)
Q Consensus 304 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 383 (1002)
..+....++.|++++|++++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 2222335899999999999888888999999999999999998 678889999999999999999998888899999999
Q ss_pred cceeeeccccccCCCC-cCcCCCCCcEEEccCccccCCC--CCcCCCCCcceEEEcccCcccCccccccccCCcccEEEc
Q 001867 384 EELLMIYNSFTGQLPD-GLGHCQSLTRVRLGYNRLTGKV--PPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLII 460 (1002)
Q Consensus 384 ~~L~l~~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 460 (1002)
++|++++|.+.+.+|. .+..+++|++|++++|++++.. |..+..+++|+.|++++|.+.+..+..+..+++|+.|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 9999999999876665 4889999999999999998766 778899999999999999999888999999999999999
Q ss_pred cCCcCCCCCccc-cccccccccccccccccCCCCcccccccccCCeeecCCCcCCcc---cccccccccccccccccCcc
Q 001867 461 SKNNLSGSLPEE-IGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGE---LPSSVSSWKKLNELNLADNL 536 (1002)
Q Consensus 461 s~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~ 536 (1002)
++|++.+..|.. +..+++|+.|++++|++++..|..+..+++|++|+|++|++++. .+..++.+++|++|+|++|.
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 999998776654 88999999999999999988888999999999999999999873 33678999999999999999
Q ss_pred cccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChh--hhhhcccccccCCCCCCC
Q 001867 537 FYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSL--FAKEMYRNSFLGNPGLCG 609 (1002)
Q Consensus 537 l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~~n~~~cg 609 (1002)
+++.+|..++++++|++|+|++|++++.+|..+..+ .| .|+|++|++++.+|.. ....+....+.|||+.|.
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 998888999999999999999999999999999888 68 9999999999888864 446677788999998874
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.6e-58 Score=561.69 Aligned_cols=526 Identities=21% Similarity=0.194 Sum_probs=451.9
Q ss_pred cceeEEeCC---------CCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccc
Q 001867 59 WRGVECDPR---------SHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLL 129 (1002)
Q Consensus 59 w~gv~C~~~---------~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 129 (1002)
+..|.|... ...++.|||++|++++..|..|.++++|++|+|++|++.++.|.+|.++++|++|+|++|.+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 566888542 35699999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcc
Q 001867 130 TGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPE 209 (1002)
Q Consensus 130 ~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~ 209 (1002)
++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..+..+++|++|++++|++ .+..|..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l-~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI-HYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC-CEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc-cccChhh
Confidence 998999999999999999999999987788999999999999999999986545555699999999999997 3455677
Q ss_pred cCCCCccc--hhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeeeccCCccc-----CCCCCcc
Q 001867 210 LGNLTNLE--ILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLT-----GDLPTGW 282 (1002)
Q Consensus 210 ~~~l~~L~--~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-----~~~~~~~ 282 (1002)
++.+++|+ .|++++|++++..|..+.. .+|+.|++++|.. .+..+.++..+....+.-+.+. ...+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~---~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQN---LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSC---HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchh---HHHHhhhccccchhheechhhccccccccChhHh
Confidence 89999999 8999999999887777654 6899999999872 3444555544443333322221 2223344
Q ss_pred cccc--ccceeeccccccCCCCCccCCCCC-cceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCC
Q 001867 283 SNLT--SLRLLDASMNDLTGPIPDDLTRLP-LESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPL 359 (1002)
Q Consensus 283 ~~l~--~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 359 (1002)
..+. +|+.|++++|++++..+..+..++ |+.|++++|+++ .+|..+..+++|++|++++|++.+..|..+..+++|
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 4444 788899999999887777777765 999999999988 677888889999999999999988888888999999
Q ss_pred ceEEccCccccCCCCh-hhhccCcccceeeeccccccCC--CCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEc
Q 001867 360 RWVDLSNNQFTGEIPA-SLCEKGELEELLMIYNSFTGQL--PDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLEL 436 (1002)
Q Consensus 360 ~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 436 (1002)
++|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..++++++|++|++++|++++..|..|..+++|+.|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 9999999998866655 4888899999999999998766 788899999999999999999888999999999999999
Q ss_pred ccCcccCccccc-cccCCcccEEEccCCcCCCCCccccccccccccccccccccCC---CCcccccccccCCeeecCCCc
Q 001867 437 TDNFLSGEISKN-IAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTG---SLPESLTNLAELGSLDLHAND 512 (1002)
Q Consensus 437 ~~N~i~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~Ls~N~ 512 (1002)
++|++.+..+.. +..+++|+.|++++|.+++..|..++.+++|+.|++++|++++ ..+..+..+++|+.|+|++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 999998876554 8889999999999999998889999999999999999999986 234678999999999999999
Q ss_pred CCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChh
Q 001867 513 LSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSL 591 (1002)
Q Consensus 513 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~ 591 (1002)
+++.+|..|+.+++|+.|+|++|++++.+|..+.+++.| +|+|++|++++.+|..++.+ +|+.|++++|++++..+..
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 999999999999999999999999999999999999999 99999999999888888888 8999999999999877743
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-58 Score=574.24 Aligned_cols=506 Identities=22% Similarity=0.203 Sum_probs=246.6
Q ss_pred CeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCC-CCCccccCcccccccccccccCCCCccccccCCccccc
Q 001867 69 HSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTL-PDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLD 147 (1002)
Q Consensus 69 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~ 147 (1002)
.+++.|||++|.|++..|..|.++++|++|+|++|.+.+.+ |.+|.++++|++|+|++|.|++..|..|.++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 34555555555555555555555555555555555333333 44555555555555555555555555555555555555
Q ss_pred cccccccCCCCcc--cccccccceeeeccccccCccc-cccccccccccccccCCCCCCCCCCcccCCC--Cccchhhcc
Q 001867 148 LTGNNFSGDIPES--FGRFQKLEVISLVYNLLDGTIP-AFLGNISTLKMLNLSYNPFLPGRIPPELGNL--TNLEILWLT 222 (1002)
Q Consensus 148 Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l--~~L~~L~L~ 222 (1002)
|++|.+++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+ .+..+..+..+ ++|+.|+++
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i-~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI-FLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCC-CCCCSGGGHHHHHCSSCCCEEC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcC-CeeCHHHcccccCCccceEECC
Confidence 5555555444333 5555555555555555554433 3455555555555555553 23344444444 455555555
Q ss_pred Ccccccccccccccccc------cchhcccCcccccccCcccccc---cceeeeeccCC---------cccCCCCCcccc
Q 001867 223 ECNLVGEIPDSLGRLAK------LVDLDLALNNLVGAIPSSLTEL---ASVVQIELYNN---------SLTGDLPTGWSN 284 (1002)
Q Consensus 223 ~n~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~~~~l~~l---~~L~~L~L~~N---------~l~~~~~~~~~~ 284 (1002)
+|.+.+..|..++.+.+ |+.|++++|.+++..+..+... .+++.|.++.+ .+.+..+..|..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 55555555444444433 5555555555554444444322 23444444321 122222222332
Q ss_pred c--cccceeeccccccCCCCCccCCCCC-cceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCce
Q 001867 285 L--TSLRLLDASMNDLTGPIPDDLTRLP-LESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRW 361 (1002)
Q Consensus 285 l--~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 361 (1002)
+ ++|+.|++++|.+.+..|..+..++ |+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 2 3455555555555544444444443 555555555555555555555555555555555555555555555555555
Q ss_pred EEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcc
Q 001867 362 VDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFL 441 (1002)
Q Consensus 362 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i 441 (1002)
|+|++|++++..+..|..+++|++|++++|.+++ +..+++|+.|++++|+++ .+|.. ..+++.|++++|++
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-----i~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l 413 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-----IHFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRL 413 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-----CSSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-----ccCCCCcchhccCCCCcc-ccccc---ccccceeecccCcc
Confidence 5555555554444445555555555555555542 112445555555555554 22222 23445555555555
Q ss_pred cCccc-cccccCCcccEEEccCCcCCCCCcc-ccccccccccccccccccC-----CCCcccccccccCCeeecCCCcCC
Q 001867 442 SGEIS-KNIAGAANLSLLIISKNNLSGSLPE-EIGFLKSLVVLSGSENKFT-----GSLPESLTNLAELGSLDLHANDLS 514 (1002)
Q Consensus 442 ~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~ 514 (1002)
.+... ..+..+++|+.|+|++|++++..+. .+..+++|+.|++++|.++ +..|..|..+++|+.|||++|+|+
T Consensus 414 ~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 493 (844)
T 3j0a_A 414 ENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLN 493 (844)
T ss_dssp CSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHT
T ss_pred ccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCccc
Confidence 44321 1133445555555555555533222 2333455555555555554 222334455555555555555555
Q ss_pred cccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCcccccccceEEeccccCcCCC
Q 001867 515 GELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNLKLNQLNVSNNRLSGEL 588 (1002)
Q Consensus 515 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~L~~l~ls~N~l~g~~ 588 (1002)
+.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|..+. +|+.|++++|++....
T Consensus 494 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~--~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 494 SLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV--SLSVLDITHNKFICEC 563 (844)
T ss_dssp TCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS--SCCEEEEEEECCCCSS
T ss_pred ccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC--CcCEEEecCCCccccc
Confidence 55555555555555555555555543333333 4555555555555555554432 3445555555554433
No 7
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.9e-58 Score=562.77 Aligned_cols=520 Identities=21% Similarity=0.200 Sum_probs=464.2
Q ss_pred CeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCcccccc
Q 001867 69 HSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDL 148 (1002)
Q Consensus 69 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~L 148 (1002)
.+++.|||++|.+++..|..|+++++|++|+|++|+++++.+..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 46899999999999999999999999999999999999877778999999999999999999888889999999999999
Q ss_pred ccccccCCCCcccccccccceeeeccccccCccccccc--cccccccccccCCCCCCCCCCcccCCC-------------
Q 001867 149 TGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLG--NISTLKMLNLSYNPFLPGRIPPELGNL------------- 213 (1002)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~Ls~N~~~~~~~p~~~~~l------------- 213 (1002)
++|++++..|..|+++++|++|++++|++++..+..++ .+++|++|++++|++ .+..|..+..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l-~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI-KEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC-CCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc-cccChhhhhhhhhhhhhhcccccc
Confidence 99999999999999999999999999999988887765 458999999999986 45556555544
Q ss_pred --------------CccchhhccCcccccccccccccccc--cchhcccCcccccccCcccccccceeeeeccCCcccCC
Q 001867 214 --------------TNLEILWLTECNLVGEIPDSLGRLAK--LVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGD 277 (1002)
Q Consensus 214 --------------~~L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 277 (1002)
++|+.|++++|++++..|..|..++. |++|++++|++++..|..|..+++|+.|++++|++.+.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 56788889999999999999998876 99999999999999999999999999999999999999
Q ss_pred CCCccccccccceeeccccccCCC-----CCc----cCCCCC-cceeecCCCcccCcCCcccCCCcccchhcccccccCC
Q 001867 278 LPTGWSNLTSLRLLDASMNDLTGP-----IPD----DLTRLP-LESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNG 347 (1002)
Q Consensus 278 ~~~~~~~l~~L~~L~Ls~N~l~~~-----~p~----~~~~~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 347 (1002)
.|..|..+++|+.|++++|...+. +|. .+..++ |+.|++++|++.+..+..|.++++|++|++++|.+..
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 999999999999999998876542 332 455554 9999999999999999999999999999999998653
Q ss_pred --CCCCCCCCC--CCCceEEccCccccCCCChhhhccCcccceeeeccccccCCC-CcCcCCCCCcEEEccCccccCCCC
Q 001867 348 --TLPGDLGKN--SPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLP-DGLGHCQSLTRVRLGYNRLTGKVP 422 (1002)
Q Consensus 348 --~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p 422 (1002)
..+..|..+ ++|+.|++++|++++..|..|..+++|+.|++++|.+++.+| ..+.++++|++|++++|++++..+
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 447 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCT
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeCh
Confidence 223344433 589999999999999999999999999999999999998766 689999999999999999999999
Q ss_pred CcCCCCCcceEEEcccCccc--CccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCc------
Q 001867 423 PLLWGLPHVYLLELTDNFLS--GEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLP------ 494 (1002)
Q Consensus 423 ~~~~~l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p------ 494 (1002)
..|..+++|+.|++++|.+. +..|..+..+++|+.|++++|++++..|..++.+++|+.|++++|++++..+
T Consensus 448 ~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 527 (680)
T 1ziw_A 448 NSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG 527 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTS
T ss_pred hhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCC
Confidence 99999999999999999997 5688899999999999999999998888889999999999999999985321
Q ss_pred --ccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccc-c
Q 001867 495 --ESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQ-N 571 (1002)
Q Consensus 495 --~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~-~ 571 (1002)
..|.++++|+.|+|++|+++...+..|+.+++|+.|+|++|++++..|..+.++++|+.|+|++|+|++.+|..+. .
T Consensus 528 ~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 607 (680)
T 1ziw_A 528 PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA 607 (680)
T ss_dssp CCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHH
T ss_pred cchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhccc
Confidence 2478999999999999999966667899999999999999999966666788999999999999999998887776 5
Q ss_pred c-ccceEEeccccCcCCCC
Q 001867 572 L-KLNQLNVSNNRLSGELP 589 (1002)
Q Consensus 572 l-~L~~l~ls~N~l~g~~p 589 (1002)
+ +|+.|+|++|++....+
T Consensus 608 ~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 608 FRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp HTTCSEEECTTCCCCBCCC
T ss_pred ccccCEEEccCCCcccCCc
Confidence 6 79999999999988765
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-57 Score=567.90 Aligned_cols=522 Identities=20% Similarity=0.186 Sum_probs=455.9
Q ss_pred EEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCC-CccccccCCccccccccc
Q 001867 73 SIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTL-TPALADLPNLKFLDLTGN 151 (1002)
Q Consensus 73 ~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~L~~L~~L~Ls~N 151 (1002)
.+|.++++++.. |. -.++|++|+|++|.|+++.|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|
T Consensus 8 ~~dcs~~~L~~v-P~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLTQV-PQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSSCC-CS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCCCC-CC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 355667788754 44 4579999999999999999999999999999999999666555 788999999999999999
Q ss_pred cccCCCCcccccccccceeeeccccccCccccc--cccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccc
Q 001867 152 NFSGDIPESFGRFQKLEVISLVYNLLDGTIPAF--LGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGE 229 (1002)
Q Consensus 152 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 229 (1002)
++++..|+.|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+.....+..|+++++|++|+|++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999866654 999999999999999985444456899999999999999999999
Q ss_pred cccccccc--cccchhcccCcccccccCcccccccc------eeeeeccCCcccCCCCCccccc---cccceeeccc---
Q 001867 230 IPDSLGRL--AKLVDLDLALNNLVGAIPSSLTELAS------VVQIELYNNSLTGDLPTGWSNL---TSLRLLDASM--- 295 (1002)
Q Consensus 230 ~p~~~~~l--~~L~~L~L~~N~l~~~~~~~l~~l~~------L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~--- 295 (1002)
.+..+..+ ++|+.|+++.|.+.+..|..+..+.+ |+.|++++|.+.+..+..+... ++++.|.++.
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 99999988 89999999999999988887777665 9999999999998888877654 5778888773
Q ss_pred ------cccCCCCCccCCCC---CcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccC
Q 001867 296 ------NDLTGPIPDDLTRL---PLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSN 366 (1002)
Q Consensus 296 ------N~l~~~~p~~~~~~---~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 366 (1002)
|.+.+..+..+..+ .|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 33443344444443 499999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccc
Q 001867 367 NQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEIS 446 (1002)
Q Consensus 367 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~ 446 (1002)
|++++..|..|..+++|+.|++++|.+.+..+..|.++++|++|+|++|.+++. ..+++|+.|++++|+++.. |
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~l-~ 397 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVTL-P 397 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCCC-C
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcccc-c
Confidence 999988899999999999999999999998899999999999999999999853 2388999999999999854 3
Q ss_pred cccccCCcccEEEccCCcCCCCC-ccccccccccccccccccccCCCCcc-cccccccCCeeecCCCcCC-----ccccc
Q 001867 447 KNIAGAANLSLLIISKNNLSGSL-PEEIGFLKSLVVLSGSENKFTGSLPE-SLTNLAELGSLDLHANDLS-----GELPS 519 (1002)
Q Consensus 447 ~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~ 519 (1002)
.. ..+++.|++++|++++.. +..++.+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|.
T Consensus 398 ~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 398 KI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 32 568999999999999642 23466899999999999999965443 4667899999999999997 55567
Q ss_pred ccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCcccccccceEEeccccCcCCCChhhhhhcccc
Q 001867 520 SVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNLKLNQLNVSNNRLSGELPSLFAKEMYRN 599 (1002)
Q Consensus 520 ~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~L~~l~ls~N~l~g~~p~~~~~~~~~~ 599 (1002)
.|..+++|+.|+|++|.+++.+|..+.++++|+.|+|++|+|++.+|..+. -+|+.|||++|+|+|.+|.. +..+...
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~-~~~L~~l 552 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDV-FVSLSVL 552 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCC-CSSCCEE
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhH-hCCcCEE
Confidence 899999999999999999998899999999999999999999987776665 57999999999999999976 3467778
Q ss_pred cccCCCCCCC
Q 001867 600 SFLGNPGLCG 609 (1002)
Q Consensus 600 ~~~~n~~~cg 609 (1002)
.+.|||+.|+
T Consensus 553 ~l~~Np~~C~ 562 (844)
T 3j0a_A 553 DITHNKFICE 562 (844)
T ss_dssp EEEEECCCCS
T ss_pred EecCCCcccc
Confidence 8999999993
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.8e-58 Score=554.76 Aligned_cols=525 Identities=21% Similarity=0.182 Sum_probs=438.5
Q ss_pred EEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCcccccccccc
Q 001867 73 SIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNN 152 (1002)
Q Consensus 73 ~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~ 152 (1002)
.++.++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~~-ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLSK-VPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCSS-CCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCccc-CCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 46778888874 555444 789999999999999888899999999999999999998888899999999999999999
Q ss_pred ccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCccccccccc
Q 001867 153 FSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPD 232 (1002)
Q Consensus 153 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 232 (1002)
+++..|..|+++++|++|+|++|++++..+..++++++|++|+|++|.+....+|..++++++|++|++++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 99888999999999999999999999888888999999999999999986557899999999999999999999988888
Q ss_pred ccccccccc----hhcccCcccccccCcccccccceeeeeccCCccc-CCCCCccccccccceeeccccccCCC------
Q 001867 233 SLGRLAKLV----DLDLALNNLVGAIPSSLTELASVVQIELYNNSLT-GDLPTGWSNLTSLRLLDASMNDLTGP------ 301 (1002)
Q Consensus 233 ~~~~l~~L~----~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~------ 301 (1002)
.|+.+++|+ +|++++|.+++..+..+... +|+.|++++|.+. +..|..+.++++|+.+++..+.+.+.
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 888888776 69999999997777777665 8999999999887 45667788999999988876665431
Q ss_pred ---CCccCCCCCcceeec-CCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhh
Q 001867 302 ---IPDDLTRLPLESLNL-YENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASL 377 (1002)
Q Consensus 302 ---~p~~~~~~~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 377 (1002)
.+..+..+.++.+++ ..|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|++ +.+| .+
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~ 325 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL 325 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC
T ss_pred ChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC
Confidence 122223334777777 77788877777 8888899999999998864 44 788888899999999999 5777 44
Q ss_pred hccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCC--CCCcCCCCCcceEEEcccCcccCccccccccCCcc
Q 001867 378 CEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGK--VPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANL 455 (1002)
Q Consensus 378 ~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 455 (1002)
.+++|++|++++|...+.. .+..+++|++|++++|++++. .|..+..+++|+.|++++|.+.+ ++..+..+++|
T Consensus 326 -~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L 401 (606)
T 3vq2_A 326 -DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEEL 401 (606)
T ss_dssp -CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTC
T ss_pred -CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCC
Confidence 8888999999998665544 567888999999999988866 37788888999999999998876 44778888899
Q ss_pred cEEEccCCcCCCCCc-cccccccccccccccccccCCCCcccccccccCCeeecCCCcCCc-cccccccccccccccccc
Q 001867 456 SLLIISKNNLSGSLP-EEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSG-ELPSSVSSWKKLNELNLA 533 (1002)
Q Consensus 456 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls 533 (1002)
+.|++++|++.+..| ..++.+++|+.|++++|++++..|..+..+++|++|++++|++++ .+|..|+.+++|+.|+|+
T Consensus 402 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls 481 (606)
T 3vq2_A 402 QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLS 481 (606)
T ss_dssp CEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred CeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECC
Confidence 999999999987777 678888999999999999988888888889999999999999887 478888899999999999
Q ss_pred CcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChh--hh-hhcccccccCCCCCCC
Q 001867 534 DNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSL--FA-KEMYRNSFLGNPGLCG 609 (1002)
Q Consensus 534 ~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~--~~-~~~~~~~~~~n~~~cg 609 (1002)
+|.+++.+|..++++++|++|+|++|++++.+|..++.+ +|+.|||++|+|++ +|.. .. ..+....+.|||+.|+
T Consensus 482 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 482 KCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccC
Confidence 999988888888899999999999999998888888888 79999999999884 4443 12 2366677888988875
Q ss_pred CC
Q 001867 610 DL 611 (1002)
Q Consensus 610 ~~ 611 (1002)
-+
T Consensus 561 c~ 562 (606)
T 3vq2_A 561 CE 562 (606)
T ss_dssp ST
T ss_pred Cc
Confidence 43
No 10
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.7e-58 Score=556.34 Aligned_cols=499 Identities=18% Similarity=0.263 Sum_probs=296.9
Q ss_pred chHHHHHHHHHHHhccCCc--------cccCCCCCCCCCCCCCcc---ceeEEeCCCCeEEEEEcCCCCcCCCCCccccC
Q 001867 23 LNQEGLYLERVKLSLSDPD--------SALSSWGRNPRDDSPCSW---RGVECDPRSHSVASIDLSNANIAGPFPSLLCR 91 (1002)
Q Consensus 23 ~~~~~~~l~~~k~~~~d~~--------~~l~sw~~~~~~~~~C~w---~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~ 91 (1002)
...|+.||.++|.++.++. ...++|+. +.+||.| .||+|+.. ++|+.|+|++++++|.+|+.|++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~---~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF---NKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCC---SSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGG
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC---CCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhc
Confidence 3479999999999986552 23457964 4689999 99999865 79999999999999999999999
Q ss_pred CCCCCEEeccCCCC------CC------CCCCCccccCcccccccccccccCCCCccccc-cCCccccccccccccCCCC
Q 001867 92 LENLTFLTLFNNSI------NS------TLPDDISACQNLQHLDLSQNLLTGTLTPALAD-LPNLKFLDLTGNNFSGDIP 158 (1002)
Q Consensus 92 l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-L~~L~~L~Ls~N~l~~~~p 158 (1002)
|++|++|+|++|.+ .+ .+|... +..|+ +++++|.+.+.+|..+.. +..+..+++....+..
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~--- 177 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK--- 177 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC---
T ss_pred CccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc---
Confidence 99999999999976 22 334333 56777 889999888887777663 3344444444322221
Q ss_pred cccccccccceeeec--cccccCccccccccccccccccccCCCCCCCC-----------------CCcccC--CCCccc
Q 001867 159 ESFGRFQKLEVISLV--YNLLDGTIPAFLGNISTLKMLNLSYNPFLPGR-----------------IPPELG--NLTNLE 217 (1002)
Q Consensus 159 ~~~~~l~~L~~L~L~--~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~-----------------~p~~~~--~l~~L~ 217 (1002)
.....++.+.+. +|++++ +|..++++++|++|+|++|++ .+. +|..++ ++++|+
T Consensus 178 ---~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l-~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~ 252 (636)
T 4eco_A 178 ---SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPF-VAENICEAWENENSEYAQQYKTEDLKWDNLKDLT 252 (636)
T ss_dssp ---CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCC-CGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred ---ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcc-ccccccccccccccchhcccCchhhhhcccCCCC
Confidence 011122222222 345554 455555555555555555553 222 555555 666666
Q ss_pred hhhccCcccccccccccccccccchhcccCcc-ccc-ccCcccccc------cceeeeeccCCcccCCCCC--ccccccc
Q 001867 218 ILWLTECNLVGEIPDSLGRLAKLVDLDLALNN-LVG-AIPSSLTEL------ASVVQIELYNNSLTGDLPT--GWSNLTS 287 (1002)
Q Consensus 218 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~l~~l------~~L~~L~L~~N~l~~~~~~--~~~~l~~ 287 (1002)
+|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+..+ ++|+.|++++|+++ .+|. .+.++++
T Consensus 253 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~ 331 (636)
T 4eco_A 253 DVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKK 331 (636)
T ss_dssp EEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTT
T ss_pred EEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCC
Confidence 66666666666666666666666666666665 555 555555554 66666666666666 5555 6666666
Q ss_pred cceeeccccccCCCCCccCCCCC-cceeecCCCcccCcCCcccCCCcc-cchhcccccccCCCCCCCCCCCC--CCceEE
Q 001867 288 LRLLDASMNDLTGPIPDDLTRLP-LESLNLYENRLEGSLPATIADSPG-LYELRLFRNRLNGTLPGDLGKNS--PLRWVD 363 (1002)
Q Consensus 288 L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~ 363 (1002)
|+.|++++|+++|.+| .+..++ |+.|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|++|+
T Consensus 332 L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~ 408 (636)
T 4eco_A 332 LGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAID 408 (636)
T ss_dssp CCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEE
Confidence 6666666666665555 444332 555555555555 44545555555 555555555555 4444444433 555555
Q ss_pred ccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccC
Q 001867 364 LSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSG 443 (1002)
Q Consensus 364 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 443 (1002)
+++|++++.+|..+.... ...-.+++|++|+|++|++++..+..+..+++|+.|+|++|+++.
T Consensus 409 Ls~N~l~~~~p~~l~~~~-----------------~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~ 471 (636)
T 4eco_A 409 FSYNEIGSVDGKNFDPLD-----------------PTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE 471 (636)
T ss_dssp CCSSCTTTTTTCSSCTTC-----------------SSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSB
T ss_pred CcCCcCCCcchhhhcccc-----------------cccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCC
Confidence 555555555554444000 000033444444444444442222223334444555555554442
Q ss_pred ccccccc-------cCCcccEEEccCCcCCCCCccccc--cccccccccccccccCCCCcccccccccCCeeecCCC---
Q 001867 444 EISKNIA-------GAANLSLLIISKNNLSGSLPEEIG--FLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHAN--- 511 (1002)
Q Consensus 444 ~~~~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--- 511 (1002)
+.+..+. .+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|
T Consensus 472 i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~l 549 (636)
T 4eco_A 472 IPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDA 549 (636)
T ss_dssp CCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCT
T ss_pred cCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCccc
Confidence 2222222 2337888888888888 6777776 78888888888888886 7888888888888888654
Q ss_pred ---cCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeee
Q 001867 512 ---DLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLS 562 (1002)
Q Consensus 512 ---~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~ 562 (1002)
++.+.+|..++.+++|+.|+|++|++ +.+|..+. ++|++|||++|++.
T Consensus 550 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 550 QGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp TCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred ccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 44444444444444444444444444 34444433 34444444444443
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.2e-57 Score=549.22 Aligned_cols=511 Identities=20% Similarity=0.178 Sum_probs=450.6
Q ss_pred CeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCcccccc
Q 001867 69 HSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDL 148 (1002)
Q Consensus 69 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~L 148 (1002)
.+++.|+|++|++++..+..|.++++|++|+|++|+++++.|.+|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57999999999999999989999999999999999999999999999999999999999999888999999999999999
Q ss_pred ccccccCCCCcccccccccceeeeccccccC-ccccccccccccccccccCCCCCCCCCCcccCCCCccc----hhhccC
Q 001867 149 TGNNFSGDIPESFGRFQKLEVISLVYNLLDG-TIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLE----ILWLTE 223 (1002)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~----~L~L~~ 223 (1002)
++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++ .+..|..++.+++|+ +|++++
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l-~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYI-QTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCC-CEECTTTTHHHHHCTTCCCEEECTT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcc-eecChhhhhhhhccccccceeeccC
Confidence 9999998888899999999999999999986 5799999999999999999997 455567788877766 799999
Q ss_pred cccccccccccccccccchhcccCcccc-cccCcccccccceeeeeccCCcccCC------CCCcccccc--ccceeec-
Q 001867 224 CNLVGEIPDSLGRLAKLVDLDLALNNLV-GAIPSSLTELASVVQIELYNNSLTGD------LPTGWSNLT--SLRLLDA- 293 (1002)
Q Consensus 224 n~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~------~~~~~~~l~--~L~~L~L- 293 (1002)
|++++..+..+... +|++|++++|.++ +..|..+.++++|+.+++..+.+.+. .+..+..+. +++.+++
T Consensus 191 n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 191 NPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 99997666666555 9999999999987 56778899999999888865554321 122223332 4566677
Q ss_pred cccccCCCCCccCCCC-CcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCC
Q 001867 294 SMNDLTGPIPDDLTRL-PLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGE 372 (1002)
Q Consensus 294 s~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 372 (1002)
..|.+.+.+|. +..+ .|+.|++++|.+.. +| .+..+++|++|++++|++ +.+| .+ .+++|+.|++++|+..+.
T Consensus 270 ~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 270 YTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSIS 343 (606)
T ss_dssp CCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEE
T ss_pred ccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccc
Confidence 77888888887 5555 49999999999974 55 888999999999999999 5777 45 899999999999976644
Q ss_pred CChhhhccCcccceeeeccccccC--CCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccc-ccc
Q 001867 373 IPASLCEKGELEELLMIYNSFTGQ--LPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEIS-KNI 449 (1002)
Q Consensus 373 ~p~~~~~l~~L~~L~l~~N~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~-~~~ 449 (1002)
+ .+..+++|++|++++|.+++. .|..+..+++|++|++++|++++ +|..+..+++|+.|++++|++.+..+ ..+
T Consensus 344 ~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 420 (606)
T 3vq2_A 344 F--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAF 420 (606)
T ss_dssp C--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTT
T ss_pred h--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhh
Confidence 4 677899999999999999876 48889999999999999999985 66889999999999999999999887 789
Q ss_pred ccCCcccEEEccCCcCCCCCccccccccccccccccccccCC-CCcccccccccCCeeecCCCcCCcccccccccccccc
Q 001867 450 AGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTG-SLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLN 528 (1002)
Q Consensus 450 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 528 (1002)
..+++|+.|++++|++++..|..++.+++|+.|++++|++++ .+|..++.+++|+.|+|++|++++.+|..|+.+++|+
T Consensus 421 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 421 LSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 999999999999999999999999999999999999999997 4789999999999999999999999999999999999
Q ss_pred cccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc--ccceEEeccccCcCCCChh
Q 001867 529 ELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL--KLNQLNVSNNRLSGELPSL 591 (1002)
Q Consensus 529 ~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l--~L~~l~ls~N~l~g~~p~~ 591 (1002)
.|+|++|++++.+|..++++++|++|||++|+++ .+|..+..+ +|+.|++++|++.+..+-.
T Consensus 501 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9999999999988999999999999999999999 677778887 4999999999999877643
No 12
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.7e-57 Score=555.02 Aligned_cols=501 Identities=19% Similarity=0.240 Sum_probs=343.1
Q ss_pred chHHHHHHHHHHHhccCCccccCCCCCCC----CCCCCCcc------------ceeEEeCCCCeEEEEEcCCCCcCCCCC
Q 001867 23 LNQEGLYLERVKLSLSDPDSALSSWGRNP----RDDSPCSW------------RGVECDPRSHSVASIDLSNANIAGPFP 86 (1002)
Q Consensus 23 ~~~~~~~l~~~k~~~~d~~~~l~sw~~~~----~~~~~C~w------------~gv~C~~~~~~v~~l~L~~~~l~~~~~ 86 (1002)
...|+.||++||+++.|| +|+.+. .+.++|.| .||+|+. .++|+.|+|++++++|.+|
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEEC
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCc
Confidence 457999999999999887 896542 12233999 9999987 6899999999999999999
Q ss_pred ccccCCCCCCEEec-cCCCCCCCCCCCcccc----C-----ccccccc-------cccccc-----------CCCCcccc
Q 001867 87 SLLCRLENLTFLTL-FNNSINSTLPDDISAC----Q-----NLQHLDL-------SQNLLT-----------GTLTPALA 138 (1002)
Q Consensus 87 ~~~~~l~~L~~L~L-~~n~l~~~~p~~~~~l----~-----~L~~L~L-------s~N~l~-----------~~~~~~~~ 138 (1002)
+.|++|++|++|+| ++|.++|..|-.-... . .++..++ ....++ ...+....
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 8998877644221111 0 0000000 000000 00111112
Q ss_pred ccCCcccccccc--ccccCCCCcccccccccceeeeccccccC-----------------ccccccc--ccccccccccc
Q 001867 139 DLPNLKFLDLTG--NNFSGDIPESFGRFQKLEVISLVYNLLDG-----------------TIPAFLG--NISTLKMLNLS 197 (1002)
Q Consensus 139 ~L~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~l~--~l~~L~~L~Ls 197 (1002)
....++.+.+.. |++++ +|..|+++++|++|+|++|++++ .+|..++ ++++|++|+|+
T Consensus 421 ~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred cccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 233444454444 66665 66667777777777777777766 3666666 77777777777
Q ss_pred CCCCCCCCCCcccCCCCccchhhccCcc-ccc-cccccccccc-------ccchhcccCcccccccCc--ccccccceee
Q 001867 198 YNPFLPGRIPPELGNLTNLEILWLTECN-LVG-EIPDSLGRLA-------KLVDLDLALNNLVGAIPS--SLTELASVVQ 266 (1002)
Q Consensus 198 ~N~~~~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~~~--~l~~l~~L~~ 266 (1002)
+|++ .+.+|..|+++++|+.|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. .|.++++|+.
T Consensus 500 ~N~l-~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 500 NCPN-MTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp SCTT-CCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred CCCC-CccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 7764 46677777777777777777776 776 6777666655 7777777777777 6666 7777777777
Q ss_pred eeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCC-C-cceeecCCCcccCcCCcccCCCcc--cchhcccc
Q 001867 267 IELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRL-P-LESLNLYENRLEGSLPATIADSPG--LYELRLFR 342 (1002)
Q Consensus 267 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~-L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~ 342 (1002)
|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+ . |+.|+|++|+++ .+|..+..++. |+.|++++
T Consensus 578 L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 578 LDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 777777777 666 7777777777777777777 666666655 3 777777777777 56666666544 88888888
Q ss_pred cccCCCCCCCC---C--CCCCCceEEccCccccCCCChhh-hccCcccceeeeccccccCCCCcCcC--------CCCCc
Q 001867 343 NRLNGTLPGDL---G--KNSPLRWVDLSNNQFTGEIPASL-CEKGELEELLMIYNSFTGQLPDGLGH--------CQSLT 408 (1002)
Q Consensus 343 N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~l~~--------l~~L~ 408 (1002)
|++.+.+|... . .+.+|+.|+|++|+++ .+|..+ ..+++|+.|++++|.++ .+|..+.. +++|+
T Consensus 654 N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~ 731 (876)
T 4ecn_A 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLT 731 (876)
T ss_dssp SCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCC
T ss_pred CcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCcc
Confidence 88877655322 2 3347889999999998 555554 47888999999999888 45554333 33899
Q ss_pred EEEccCccccCCCCCcCC--CCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccc
Q 001867 409 RVRLGYNRLTGKVPPLLW--GLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSE 486 (1002)
Q Consensus 409 ~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 486 (1002)
.|+|++|+++ .+|..+. .+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+ ++++
T Consensus 732 ~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ls~ 791 (876)
T 4ecn_A 732 TIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DAEG 791 (876)
T ss_dssp EEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CTTC
T ss_pred EEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------Cccc
Confidence 9999999999 6788877 89999999999999987 67788889999999998754 3445
Q ss_pred cccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceee
Q 001867 487 NKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRL 561 (1002)
Q Consensus 487 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l 561 (1002)
|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|+|++|.+...-+..+.....+..+.|++|++
T Consensus 792 N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 792 NRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp CBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTT
T ss_pred ccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCc
Confidence 555555555555555555555555555 34554443 3555555555555543444444444444555555543
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-53 Score=514.66 Aligned_cols=506 Identities=21% Similarity=0.203 Sum_probs=441.8
Q ss_pred EEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccc
Q 001867 74 IDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNF 153 (1002)
Q Consensus 74 l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l 153 (1002)
++.++.+++ .+|..+. +++++|+|++|+++++.+.+|.++++|++|+|++|++++..+..|+++++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 455556666 3454443 4799999999999988888999999999999999999988888999999999999999999
Q ss_pred cCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccc
Q 001867 154 SGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDS 233 (1002)
Q Consensus 154 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 233 (1002)
++..|..|+++++|++|++++|++++..+..++++++|++|+|++|.+....+|..|+++++|++|++++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 98888999999999999999999997777789999999999999999754468999999999999999999999888889
Q ss_pred ccccccc----chhcccCcccccccCcccccccceeeeeccCCcccC-CCCCccccccccceeeccccccCC--------
Q 001867 234 LGRLAKL----VDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTG-DLPTGWSNLTSLRLLDASMNDLTG-------- 300 (1002)
Q Consensus 234 ~~~l~~L----~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~-------- 300 (1002)
++.+++| +.|++++|.+++..+..+... +|+.|++++|.... .++..+..+++++.+.+..+.+..
T Consensus 169 ~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 247 (570)
T 2z63_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247 (570)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECC
T ss_pred ccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcc
Confidence 9999998 889999999998888888776 89999999985442 244556677777776665443321
Q ss_pred -CCCccCCCCCcceeecCCC-cccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhh
Q 001867 301 -PIPDDLTRLPLESLNLYEN-RLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLC 378 (1002)
Q Consensus 301 -~~p~~~~~~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 378 (1002)
.....+..+.++.+++++| .+.+..|..+..+++|++|++++|.+. .+|..+..+ +|+.|++++|.++ .+|. .
T Consensus 248 ~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~ 322 (570)
T 2z63_A 248 KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--L 322 (570)
T ss_dssp TTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--C
T ss_pred hhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--c
Confidence 1112223345788899888 888889999999999999999999998 578888888 9999999999999 5665 4
Q ss_pred ccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCC--CCcCCCCCcceEEEcccCcccCccccccccCCccc
Q 001867 379 EKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKV--PPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLS 456 (1002)
Q Consensus 379 ~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 456 (1002)
.+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+..+++|+.|++++|.+.+..+. +..+++|+
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~ 399 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLE 399 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCC
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCC
Confidence 788999999999999887766 78999999999999998654 67888999999999999999977665 99999999
Q ss_pred EEEccCCcCCCCCc-cccccccccccccccccccCCCCcccccccccCCeeecCCCcCC-cccccccccccccccccccC
Q 001867 457 LLIISKNNLSGSLP-EEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLS-GELPSSVSSWKKLNELNLAD 534 (1002)
Q Consensus 457 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~ 534 (1002)
.|++++|++.+..| ..+..+++|+.|++++|++++..|..+..+++|+.|+|++|.++ +.+|..++.+++|++|+|++
T Consensus 400 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 479 (570)
T 2z63_A 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479 (570)
T ss_dssp EEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCC
Confidence 99999999997766 57899999999999999999999999999999999999999998 68999999999999999999
Q ss_pred cccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChh
Q 001867 535 NLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSL 591 (1002)
Q Consensus 535 N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~ 591 (1002)
|++++..|..++++++|++|+|++|++++.+|..+..+ +|+.|++++|++++.+|..
T Consensus 480 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99998889999999999999999999999888888888 8999999999999999864
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.4e-53 Score=506.15 Aligned_cols=490 Identities=21% Similarity=0.233 Sum_probs=367.5
Q ss_pred CCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCc
Q 001867 56 PCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTP 135 (1002)
Q Consensus 56 ~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 135 (1002)
.|.|.|+ |+ +++++++. +|..+. ++|++|+|++|++++..|.+|.++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~----------~~~~~l~~-ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CD----------GRSRSFTS-IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EE----------CTTSCCSS-CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EE----------CCCCcccc-ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999998 85 34566663 455443 6889999999999888888888888999999998888887778
Q ss_pred cccccCCccccccccccccCCCCcccccccccceeeeccccccCc-cccccccccccccccccCCCCCCCCCC-cccCCC
Q 001867 136 ALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGT-IPAFLGNISTLKMLNLSYNPFLPGRIP-PELGNL 213 (1002)
Q Consensus 136 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~~~~~~~p-~~~~~l 213 (1002)
.|+++++|++|+|++|++++..|..|+++++|++|+|++|++++. .|..++++++|++|++++|.+. +.+| ..++++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~-~~~~~~~~~~l 147 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETF-SEIRRIDFAGL 147 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSC-CEECTTTTTTC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccc-cccCHhhhhcc
Confidence 888888888888888888877777788888888888888888763 4667788888888888888743 3333 467777
Q ss_pred CccchhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeeeccCCcccCCC--C-Cccccccccce
Q 001867 214 TNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDL--P-TGWSNLTSLRL 290 (1002)
Q Consensus 214 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~-~~~~~l~~L~~ 290 (1002)
++|++|++++|++++..|..++.+++|++|+++.|.+.......+..+++|+.|++++|++++.. | .....+++|+.
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 77777777777777777777777777777777777765333223345666666666666666532 1 12234555666
Q ss_pred eeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCC------CCCCCCCCCCceEEc
Q 001867 291 LDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTL------PGDLGKNSPLRWVDL 364 (1002)
Q Consensus 291 L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L 364 (1002)
|++++|.+++..+..+ +..+..+++|+.+++++|.+.+.. ...+..+.+|+.|++
T Consensus 228 L~l~~n~l~~~~~~~l-------------------~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 228 LAFRGSVLTDESFNEL-------------------LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp EEEESCEEEHHHHHHH-------------------HGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred eeccccccchhHHHHH-------------------HHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 6666665554322211 122233444555555555544321 123456677888888
Q ss_pred cCccccCC-----CChhhhccCcccceeeeccccccCCCCcC-cCCCCCcEEEccCccccCCCC---CcCCCCCcceEEE
Q 001867 365 SNNQFTGE-----IPASLCEKGELEELLMIYNSFTGQLPDGL-GHCQSLTRVRLGYNRLTGKVP---PLLWGLPHVYLLE 435 (1002)
Q Consensus 365 s~N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ 435 (1002)
+++.+... .+..+...++|++|++++|.+. .+|..+ .++++|++|+|++|++++..| ..+..+++|+.|+
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~ 367 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLV 367 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEE
T ss_pred cccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEE
Confidence 88876532 2333445678899999999887 566555 578999999999999987663 4477889999999
Q ss_pred cccCcccCccc--cccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcC
Q 001867 436 LTDNFLSGEIS--KNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDL 513 (1002)
Q Consensus 436 L~~N~i~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 513 (1002)
|++|++++..+ ..+..+++|+.|++++|+++ .+|..++.+++|+.|++++|+++ .+|..+. ++|++|||++|+|
T Consensus 368 Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l 443 (549)
T 2z81_A 368 LSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNL 443 (549)
T ss_dssp CTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCC
T ss_pred ccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCCh
Confidence 99999987643 55888999999999999999 78999999999999999999998 4565442 6899999999999
Q ss_pred CcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCCh
Q 001867 514 SGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPS 590 (1002)
Q Consensus 514 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~ 590 (1002)
++.+ ..+++|++|+|++|+++ .+|. .+.+++|++|||++|++++.+|..++.+ +|+.|+|++|++++..|.
T Consensus 444 ~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 444 DSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp SCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred hhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 9753 57899999999999998 7887 5789999999999999999888889888 899999999999999884
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-52 Score=449.64 Aligned_cols=262 Identities=29% Similarity=0.384 Sum_probs=206.7
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
+++.+.++||+|+||+||+|+++ ..||||+++.. .......+.|.+|+.++++++|||||+++
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~---------------~~~~~~~~~f~~E~~il~~l~HpNIV~l~ 98 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVV---------------DPTPEQFQAFRNEVAVLRKTRHVNILLFM 98 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCS---------------SCCHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEec---------------CCCHHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 56788899999999999999875 46999998432 12344567899999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++.+ +..|+||||+++|+|.++++. ....+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||
T Consensus 99 g~~~~-~~~~iVmEy~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki 173 (307)
T 3omv_A 99 GYMTK-DNLAIVTQWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp EEECS-SSCEEEEECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEE
T ss_pred EEEEC-CeEEEEEEcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEE
Confidence 98865 568999999999999999975 345799999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT---LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+|||+|+..............+||+.|||||++.+ ..|+.++|||||||++|||+||+.||............+...
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~ 253 (307)
T 3omv_A 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG 253 (307)
T ss_dssp CCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTT
T ss_pred eeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcC
Confidence 99999987765444444556689999999999864 458999999999999999999999997654444333333222
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
.. .|.....+.+....+.+++.+||+.||++|||++||++.|+.+..
T Consensus 254 ~~--------~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 254 YA--------SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CC--------CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CC--------CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11 111111122222358889999999999999999999999988754
No 16
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.1e-52 Score=450.72 Aligned_cols=260 Identities=25% Similarity=0.402 Sum_probs=214.1
Q ss_pred cCCCcCCeeeecCCccEEEEEEc------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK 756 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 756 (1002)
++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++||
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-----------------~~~~~~~f~~E~~il~~l~Hp 75 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-----------------SDNARKDFHREAELLTNLQHE 75 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-----------------CHHHHHHHHHHHHHHTTCCCT
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-----------------ChHHHHHHHHHHHHHHhCCCC
Confidence 35667789999999999999864 4778999998432 234567899999999999999
Q ss_pred ceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeC
Q 001867 757 NIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK-----------GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHR 825 (1002)
Q Consensus 757 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHr 825 (1002)
|||+++|++.+++..|+||||+++|+|.++++... ...++|.++.+|+.|||.||+|||++ +||||
T Consensus 76 nIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHR 152 (299)
T 4asz_A 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHR 152 (299)
T ss_dssp TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 99999999999999999999999999999997532 35799999999999999999999999 99999
Q ss_pred CCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCC
Q 001867 826 DVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVD 904 (1002)
Q Consensus 826 Dlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~ 904 (1002)
||||+|||+++++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 153 DlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~ 232 (299)
T 4asz_A 153 DLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232 (299)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999987765544444445679999999999999999999999999999999999 899997
Q ss_pred CCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 905 PEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
... ..+....+.... . .+....+++ ++.+++.+||+.||++|||++||.+.|+++.+.
T Consensus 233 ~~~-~~~~~~~i~~~~----~----~~~p~~~~~----~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 233 QLS-NNEVIECITQGR----V----LQRPRTCPQ----EVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp TSC-HHHHHHHHHHTC----C----CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHcCC----C----CCCCccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 543 333333332211 1 111223333 488999999999999999999999999998643
No 17
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.5e-51 Score=451.60 Aligned_cols=259 Identities=25% Similarity=0.395 Sum_probs=205.5
Q ss_pred cCCCcCCeeeecCCccEEEEEEc------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK 756 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 756 (1002)
++|.+.++||+|+||+||+|++. +++.||||+++.. .....++|.+|++++++++||
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-----------------~~~~~~~f~~E~~il~~l~Hp 103 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-----------------SESARQDFQREAELLTMLQHQ 103 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-----------------SHHHHHHHHHHHHHHTTCCCT
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-----------------CHHHHHHHHHHHHHHHhCCCC
Confidence 34566789999999999999864 4788999998432 334567899999999999999
Q ss_pred ceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 001867 757 NIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK-------------GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIV 823 (1002)
Q Consensus 757 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ii 823 (1002)
|||+++|+|.+.+..|+||||+++|+|.++++... ..+++|.++++|+.|||.||+|||++ +||
T Consensus 104 nIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~ii 180 (329)
T 4aoj_A 104 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFV 180 (329)
T ss_dssp TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred CCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---Cee
Confidence 99999999999999999999999999999997542 24699999999999999999999999 999
Q ss_pred eCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCC
Q 001867 824 HRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLP 902 (1002)
Q Consensus 824 HrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p 902 (1002)
||||||+|||+++++.+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.|
T Consensus 181 HRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~P 260 (329)
T 4aoj_A 181 HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260 (329)
T ss_dssp CSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred cccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCC
Confidence 999999999999999999999999997765544444456679999999999999999999999999999999999 8999
Q ss_pred CCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 903 VDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
|.... ..+....+..... + +....+++ ++.+++.+||+.||++|||++||++.|+.+.+
T Consensus 261 f~~~~-~~~~~~~i~~g~~---~-----~~p~~~~~----~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 261 WYQLS-NTEAIDCITQGRE---L-----ERPRACPP----EVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp TCSSC-HHHHHHHHHHTCC---C-----CCCTTCCH----HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCC-HHHHHHHHHcCCC---C-----CCcccccH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 97543 2333333322111 1 11123333 47889999999999999999999999999864
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.6e-51 Score=448.82 Aligned_cols=257 Identities=25% Similarity=0.376 Sum_probs=212.2
Q ss_pred CCCcCCeeeecCCccEEEEEEc------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 684 GLDEDNVIGSGSSGKVYKVVLS------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 684 ~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
++++.++||+|+||+||+|++. +++.||||++.... .....++|.+|+.++++++|||
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~----------------~~~~~~~f~~E~~il~~l~HpN 90 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA----------------EGPLREEFRHEAMLRARLQHPN 90 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C----------------CC-CHHHHHHHHHHHHHCCCTT
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc----------------ChHHHHHHHHHHHHHHhCCCCC
Confidence 4556789999999999999863 46789999984321 2233567999999999999999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK--------------GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIV 823 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ii 823 (1002)
||+++|++.+++..++||||+++|+|.+++.... ...++|..+.+|+.|||.||+|||++ +||
T Consensus 91 IV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~ii 167 (308)
T 4gt4_A 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVV 167 (308)
T ss_dssp BCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred CCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCC
Confidence 9999999999999999999999999999996532 24699999999999999999999999 999
Q ss_pred eCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCC
Q 001867 824 HRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLP 902 (1002)
Q Consensus 824 HrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p 902 (1002)
||||||+|||+++++.+||+|||+|+...............||++|||||++.++.|+.++|||||||++|||+| |+.|
T Consensus 168 HRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~P 247 (308)
T 4gt4_A 168 HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247 (308)
T ss_dssp CSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred CCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCC
Confidence 999999999999999999999999987765544444556689999999999999999999999999999999999 8999
Q ss_pred CCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Q 001867 903 VDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEV 972 (1002)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 972 (1002)
|... +..++...+.... . .+....++. .+.+++.+||+.||++||||+||++.|+.+
T Consensus 248 f~~~-~~~~~~~~i~~~~----~----~~~p~~~~~----~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 248 YCGY-SNQDVVEMIRNRQ----V----LPCPDDCPA----WVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TTTC-CHHHHHHHHHTTC----C----CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCC-CHHHHHHHHHcCC----C----CCCcccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 9754 3334443332211 1 122233333 488999999999999999999999999865
No 19
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.3e-51 Score=447.05 Aligned_cols=273 Identities=25% Similarity=0.289 Sum_probs=217.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.+.|++.++||+|+||.||+|+.+ +|+.||||++... ....+|+.++++++|||||+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~----------------------~~~~~E~~il~~l~HpnIV~ 114 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE----------------------VFRVEELVACAGLSSPRIVP 114 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT----------------------TCCTHHHHTTTTCCCTTBCC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHH----------------------HhHHHHHHHHHhCCCCCCCc
Confidence 345777889999999999999974 6899999998432 11246999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC-C
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF-G 839 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~-~ 839 (1002)
+++++.+++..|+||||++||+|.++++. .+.+++..++.++.||+.||+|||++ +||||||||+|||++.+| +
T Consensus 115 l~~~~~~~~~~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~ 189 (336)
T 4g3f_A 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSR 189 (336)
T ss_dssp EEEEEEETTEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCC
T ss_pred EEEEEEECCEEEEEEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCE
Confidence 99999999999999999999999999985 35699999999999999999999999 999999999999999987 6
Q ss_pred eEEccccCcccccCCCCCc---ccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPK---SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
+||+|||+|+......... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.............
T Consensus 190 vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~ 269 (336)
T 4g3f_A 190 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA 269 (336)
T ss_dssp EEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH
T ss_pred EEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH
Confidence 9999999999876543222 2234579999999999999999999999999999999999999998665444433332
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccccCCCCCCCCCcchhhccc
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKKDGKLSPYYHEDAS 996 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1002)
..... .. ....... ..+.+++.+||+.||++|||++|+++.+..+.... .+..|||..+...
T Consensus 270 ~~~~~---~~----~~~~~~s----~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~-------~~l~hPw~~~~~~ 331 (336)
T 4g3f_A 270 SEPPP---IR----EIPPSCA----PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV-------GGLKSPWKGEYKE 331 (336)
T ss_dssp HSCCG---GG----GSCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT-------TSSCSCSSSSCCC
T ss_pred cCCCC---ch----hcCccCC----HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh-------hhccCCCcCCCCC
Confidence 21110 00 0111222 24778999999999999999999999998876543 2556888776554
Q ss_pred cCC
Q 001867 997 DQG 999 (1002)
Q Consensus 997 ~~~ 999 (1002)
+.+
T Consensus 332 Pr~ 334 (336)
T 4g3f_A 332 PRG 334 (336)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 20
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-50 Score=488.29 Aligned_cols=491 Identities=20% Similarity=0.187 Sum_probs=415.5
Q ss_pred CCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccc
Q 001867 68 SHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLD 147 (1002)
Q Consensus 68 ~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~ 147 (1002)
..+++.|||++|++++..+..|.++++|++|+|++|+++++.|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 35699999999999999889999999999999999999998899999999999999999999988889999999999999
Q ss_pred cccccccCCCCcccccccccceeeeccccccC-ccccccccccccccccccCCCCCCCCCCcccCCCCcc----chhhcc
Q 001867 148 LTGNNFSGDIPESFGRFQKLEVISLVYNLLDG-TIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNL----EILWLT 222 (1002)
Q Consensus 148 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L----~~L~L~ 222 (1002)
|++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++ .+..+..++.+++| +.|+++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l-~~~~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI-QSIYCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCC-CEECGGGGHHHHTCTTCCCEEECT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcc-ceecHHHccchhccchhhhhcccC
Confidence 99999997766689999999999999999997 4699999999999999999997 34556778888888 889999
Q ss_pred CcccccccccccccccccchhcccCccccc-ccCcccccccceeeeeccCCcc------cCCCCCcccccc--ccceeec
Q 001867 223 ECNLVGEIPDSLGRLAKLVDLDLALNNLVG-AIPSSLTELASVVQIELYNNSL------TGDLPTGWSNLT--SLRLLDA 293 (1002)
Q Consensus 223 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~N~l------~~~~~~~~~~l~--~L~~L~L 293 (1002)
+|.+++..|..+..+ +|+.|++++|.... ..+..+.++++++.+.+..+.+ .......+..++ .++.+++
T Consensus 186 ~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 999998888888766 89999999985442 3445566666666555443222 222223344443 3566677
Q ss_pred ccc-ccCCCCCccCCCCC-cceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccC
Q 001867 294 SMN-DLTGPIPDDLTRLP-LESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTG 371 (1002)
Q Consensus 294 s~N-~l~~~~p~~~~~~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 371 (1002)
++| .+.+..|..+..++ |+.|++++|.++ .+|..+..+ +|++|++++|.+. .+|. ..+++|+.|++++|.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 777 66777777777664 888888888887 577777777 8888888888887 4443 467788889999888886
Q ss_pred CCChhhhccCcccceeeeccccccCC--CCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccc-cc
Q 001867 372 EIPASLCEKGELEELLMIYNSFTGQL--PDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEIS-KN 448 (1002)
Q Consensus 372 ~~p~~~~~l~~L~~L~l~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~-~~ 448 (1002)
..+. ..+++|++|++++|.+++.. |..+.++++|++|++++|++++..+. +..+++|+.|++++|.+.+..+ ..
T Consensus 340 ~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 416 (570)
T 2z63_A 340 AFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSV 416 (570)
T ss_dssp BCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCT
T ss_pred cccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhh
Confidence 6665 67788899999998888654 67788889999999999999865554 8889999999999999988766 56
Q ss_pred cccCCcccEEEccCCcCCCCCccccccccccccccccccccC-CCCcccccccccCCeeecCCCcCCccccccccccccc
Q 001867 449 IAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFT-GSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKL 527 (1002)
Q Consensus 449 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 527 (1002)
+..+++|+.|++++|++.+..|..++.+++|+.|++++|+++ +.+|..+..+++|+.|+|++|++++..|..|..+++|
T Consensus 417 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 496 (570)
T 2z63_A 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496 (570)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCC
Confidence 888999999999999999889999999999999999999998 5789999999999999999999999999999999999
Q ss_pred ccccccCcccccCCCCCccccccccEEeCcceeeecccCCc
Q 001867 528 NELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVG 568 (1002)
Q Consensus 528 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~ 568 (1002)
+.|+|++|++++.+|..+.++++|+.|+|++|++++.+|..
T Consensus 497 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 497 QVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999999888888999999999999999999988853
No 21
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.6e-51 Score=440.49 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=210.8
Q ss_pred cCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||+||+|+. .+++.||||++.+. ...+....+.+.+|++++++++|||||++
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~--------------~~~~~~~~~~~~~E~~il~~l~HpnIv~l 97 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--------------HIIKENKVPYVTRERDVMSRLDHPFFVKL 97 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHH--------------HHHHTTCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHH--------------HCCCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 5688899999999999999996 46899999998543 11223345779999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
+++|.+++..|+||||++||+|.++++. .+.+++..++.++.||+.||+|||++ +||||||||+|||++.++.+|
T Consensus 98 ~~~~~~~~~~yivmEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vK 172 (311)
T 4aw0_A 98 YFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQ 172 (311)
T ss_dssp EEEEECSSEEEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEE
T ss_pred EEEEEeCCEEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEE
Confidence 9999999999999999999999999985 35699999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
|+|||+|+.+............+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+....+. .
T Consensus 173 l~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~i~---~ 248 (311)
T 4aw0_A 173 ITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAKII---K 248 (311)
T ss_dssp ECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH---H
T ss_pred EEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH---c
Confidence 9999999988655444445567899999999999999999999999999999999999999976532 22222221 1
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
..+. +. ....+ ++.+++.+|++.||++|||++|+...
T Consensus 249 -~~~~--~p---~~~s~----~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 249 -LEYD--FP---EKFFP----KARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp -TCCC--CC---TTCCH----HHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred -CCCC--CC---cccCH----HHHHHHHHHccCCHhHCcChHHHcCC
Confidence 1111 11 11222 47789999999999999999987543
No 22
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.8e-51 Score=446.48 Aligned_cols=254 Identities=24% Similarity=0.326 Sum_probs=206.2
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
.+++|++.+.||+|+||+||+|+. .+|+.||||++.+.. ......+.+.+|+.++++++|||||
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---------------~~~~~~~~~~~E~~il~~l~HpnIV 86 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR---------------MSSKEREESRREVAVLANMKHPNIV 86 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTT---------------SCHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH---------------CCHHHHHHHHHHHHHHHHCCCCCCC
Confidence 357899999999999999999996 468999999985431 1234567899999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+++..|+||||++||+|.+++...+...+++..++.|+.||+.||+|||++ +||||||||+|||++.+|.
T Consensus 87 ~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~ 163 (350)
T 4b9d_A 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGT 163 (350)
T ss_dssp CEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCC
T ss_pred cEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCC
Confidence 9999999999999999999999999999876677789999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+.+.+.
T Consensus 164 vKl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i---- 237 (350)
T 4b9d_A 164 VQLGDFGIARVLNSTV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI---- 237 (350)
T ss_dssp EEECSTTEESCCCHHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH----
T ss_pred EEEcccccceeecCCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH----
Confidence 9999999998764321 1234567999999999999999999999999999999999999999765322222222
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... . .+....... ++.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~-~----~~~~~~~s~----~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 238 ISGS-F----PPVSLHYSY----DLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHTC-C----CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HcCC-C----CCCCccCCH----HHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111 1 111122222 4778999999999999999999986
No 23
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.1e-51 Score=493.08 Aligned_cols=462 Identities=21% Similarity=0.260 Sum_probs=369.9
Q ss_pred CCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeec
Q 001867 94 NLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLV 173 (1002)
Q Consensus 94 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 173 (1002)
+++.|+|++|.+.|.+|.+|+.|++|++|+|++|.+.. .+..++... +...+|... +..|+ ++++
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~-~~~~~~~~~-----------~~~~~~~~~--~~~l~-l~l~ 146 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKV-NERLFGPKG-----------ISANMSDEQ--KQKMR-MHYQ 146 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGG-TCCSBSTTS-----------BCTTCCHHH--HHHHH-THHH
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCcccc-CCccccccc-----------cccCchHHH--HHHHH-hhHH
Confidence 67788888888888888888888888888888887631 111111000 001223222 34455 5666
Q ss_pred cccccCcccccccc-ccccccccccCCCCCCCCCCcccCCCCccchhhcc--CcccccccccccccccccchhcccCccc
Q 001867 174 YNLLDGTIPAFLGN-ISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLT--ECNLVGEIPDSLGRLAKLVDLDLALNNL 250 (1002)
Q Consensus 174 ~N~l~~~~p~~l~~-l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~L~~N~l 250 (1002)
+|.+.+.+|..+.. +..+..+++....+. ......++.+++. .|++++ +|..|+++++|++|+|++|++
T Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l 218 (636)
T 4eco_A 147 KTFVDYDPREDFSDLIKDCINSDPQQKSIK-------KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPF 218 (636)
T ss_dssp HHHTCCCGGGGSCHHHHHHHHHCTTSCCCC-------CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCC
T ss_pred HhhhccCchhhHHHHHHHHhhcCccccccc-------cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcc
Confidence 66666555555542 234445555443321 1112234444443 578887 788888888888888888888
Q ss_pred ccc-----------------cCcccc--cccceeeeeccCCcccCCCCCccccccccceeeccccc-cCC-CCCccCCCC
Q 001867 251 VGA-----------------IPSSLT--ELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMND-LTG-PIPDDLTRL 309 (1002)
Q Consensus 251 ~~~-----------------~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~~ 309 (1002)
++. +|..+. ++++|++|+|++|++.+.+|..+.++++|++|++++|+ +++ .+|..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L 298 (636)
T 4eco_A 219 VAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQAL 298 (636)
T ss_dssp CGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHH
T ss_pred ccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhh
Confidence 875 888888 89999999999999988999889999999999999998 887 788777663
Q ss_pred -------CcceeecCCCcccCcCCc--ccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhcc
Q 001867 310 -------PLESLNLYENRLEGSLPA--TIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEK 380 (1002)
Q Consensus 310 -------~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 380 (1002)
.|+.|+|++|+++ .+|. .+..+++|++|++++|+++|.+| .+..+++|++|+|++|+++ .+|..+..+
T Consensus 299 ~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 375 (636)
T 4eco_A 299 ADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGF 375 (636)
T ss_dssp HHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEE
T ss_pred hccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhh
Confidence 4999999999998 7888 89999999999999999998888 8999999999999999999 888889999
Q ss_pred Cc-ccceeeeccccccCCCCcCcCCC--CCcEEEccCccccCCCCCcCC-------CCCcceEEEcccCcccCccccccc
Q 001867 381 GE-LEELLMIYNSFTGQLPDGLGHCQ--SLTRVRLGYNRLTGKVPPLLW-------GLPHVYLLELTDNFLSGEISKNIA 450 (1002)
Q Consensus 381 ~~-L~~L~l~~N~l~~~~p~~l~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~L~~N~i~~~~~~~~~ 450 (1002)
++ |++|++++|.++ .+|..+..++ +|++|++++|++++..|..|. .+++|+.|+|++|.++.+.+..+.
T Consensus 376 ~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~ 454 (636)
T 4eco_A 376 TEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFS 454 (636)
T ss_dssp CTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHH
T ss_pred cccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHc
Confidence 99 999999999999 7888888765 899999999999999999888 888999999999999966666677
Q ss_pred cCCcccEEEccCCcCCCCCcccccc-c-------cccccccccccccCCCCccccc--ccccCCeeecCCCcCCcccccc
Q 001867 451 GAANLSLLIISKNNLSGSLPEEIGF-L-------KSLVVLSGSENKFTGSLPESLT--NLAELGSLDLHANDLSGELPSS 520 (1002)
Q Consensus 451 ~l~~L~~L~Ls~N~l~~~~p~~~~~-l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~ 520 (1002)
.+++|+.|+|++|+++ .+|..+.. . ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..
T Consensus 455 ~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~ 531 (636)
T 4eco_A 455 TGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQ 531 (636)
T ss_dssp TTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCG
T ss_pred cCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChh
Confidence 7999999999999999 66665433 2 39999999999999 7888887 99999999999999998 8999
Q ss_pred cccccccccccc------cCcccccCCCCCccccccccEEeCcceeeecccCCcccccccceEEeccccCcCC
Q 001867 521 VSSWKKLNELNL------ADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNLKLNQLNVSNNRLSGE 587 (1002)
Q Consensus 521 ~~~l~~L~~L~L------s~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~L~~l~ls~N~l~g~ 587 (1002)
+..+++|+.|+| ++|++.+.+|..++++++|++|+|++|++ +.+|..+. -+|+.|||++|++...
T Consensus 532 ~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 532 PLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNISI 602 (636)
T ss_dssp GGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTCEE
T ss_pred hhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCccc
Confidence 999999999999 56889999999999999999999999999 68888765 3799999999987643
No 24
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.3e-50 Score=440.33 Aligned_cols=249 Identities=25% Similarity=0.347 Sum_probs=205.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
+.|++.++||+|+||+||+|+.+ +|+.||||++... .....+.+.+|+.++++++|||||++
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~-----------------~~~~~~~~~~Ei~il~~l~HpnIV~l 136 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR-----------------KQQRRELLFNEVVIMRDYQHENVVEM 136 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGG-----------------GCSSGGGGHHHHHHHHHCCCTTBCCE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecC-----------------chhHHHHHHHHHHHHHhCCCCCCCcE
Confidence 45778889999999999999974 6899999998532 11234568899999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
+++|.+++..|+||||++||+|.+++.. +.+++..++.++.||+.||+|||++ +||||||||+|||++.+|.+|
T Consensus 137 ~~~~~~~~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vK 210 (346)
T 4fih_A 137 YNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVK 210 (346)
T ss_dssp EEEEEETTEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEEEECCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEE
Confidence 9999999999999999999999999974 4599999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
|+|||+|+....... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+....+....
T Consensus 211 l~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~i~~~~- 286 (346)
T 4fih_A 211 LSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-LKAMKMIRDNL- 286 (346)
T ss_dssp ECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSS-
T ss_pred EecCcCceecCCCCC--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHcCC-
Confidence 999999987755432 23456899999999999999999999999999999999999999976532 22222221111
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... +......+ ++.+++.+||+.||++|||++|+++
T Consensus 287 ---~~~~--~~~~~~s~----~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 287 ---PPRL--KNLHKVSP----SLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ---CCCC--SCGGGSCH----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---CCCC--CccccCCH----HHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000 11112222 4778999999999999999998874
No 25
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6e-50 Score=430.89 Aligned_cols=246 Identities=26% Similarity=0.390 Sum_probs=198.0
Q ss_pred CcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeeeeE
Q 001867 686 DEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLWCC 764 (1002)
Q Consensus 686 ~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 764 (1002)
++.++||+|+||+||+|.+. +++.||+|++.... ......++|.+|++++++++|||||+++++
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~---------------~~~~~~~~~~~E~~il~~l~HpnIV~~~~~ 93 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK---------------LTKSERQRFKEEAEMLKGLQHPNIVRFYDS 93 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG---------------SCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh---------------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 45678999999999999974 58899999985421 133456789999999999999999999999
Q ss_pred Eec----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEC-CC
Q 001867 765 CTT----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPS--IVHRDVKSNNILLD-GD 837 (1002)
Q Consensus 765 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--iiHrDlk~~NIll~-~~ 837 (1002)
|.+ ++..|+||||+++|+|.++++. .+.+++..+..++.||+.||+|||++ + ||||||||+|||++ .+
T Consensus 94 ~~~~~~~~~~~~lvmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~ 168 (290)
T 3fpq_A 94 WESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPT 168 (290)
T ss_dssp EEEEETTEEEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTT
T ss_pred EeeccCCCcEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCC
Confidence 865 3568999999999999999985 45699999999999999999999998 6 99999999999998 47
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+.+||+|||+|+..... .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||............+.
T Consensus 169 g~vKl~DFGla~~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~ 243 (290)
T 3fpq_A 169 GSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT 243 (290)
T ss_dssp SCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT
T ss_pred CCEEEEeCcCCEeCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHH
Confidence 89999999999864332 2345689999999998865 699999999999999999999999976544443333222
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
... ....++ ....+ ++.+++.+||+.||++|||++|+++
T Consensus 244 ~~~----~~~~~~---~~~~~----~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 244 SGV----KPASFD---KVAIP----EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TTC----CCGGGG---GCCCH----HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCC----CCCCCC---ccCCH----HHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 111111 11222 3778999999999999999999863
No 26
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.2e-49 Score=441.64 Aligned_cols=268 Identities=24% Similarity=0.339 Sum_probs=219.7
Q ss_pred HHHH-hcCCCcCCeeeecCCccEEEEEEcC------CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHH
Q 001867 678 EYEI-LDGLDEDNVIGSGSSGKVYKVVLSN------GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETL 750 (1002)
Q Consensus 678 ~~~~-~~~~~~~~~LG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 750 (1002)
+|++ .++|++.+.||+|+||+||+|.+.. ++.||||++.... .....+.|.+|+.++
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~----------------~~~~~~~~~~E~~il 121 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------------THSEHRALMSELKIL 121 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC----------------CHHHHHHHHHHHHHH
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc----------------ChHHHHHHHHHHHHH
Confidence 4555 4678899999999999999998642 3579999985421 233456799999999
Q ss_pred hcCCC-CceeeeeeEEecC-CeeeEEEeccCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHH
Q 001867 751 GKIRH-KNIVKLWCCCTTR-DCKLLVYEYMPNGSLGDLLHSCK--------------GGLLDWPTRYKIIVDAAEGLSYL 814 (1002)
Q Consensus 751 ~~l~h-~niv~l~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~L 814 (1002)
.+++| ||||+++|+|.+. +..|+||||+++|+|.++++..+ ...+++.++..++.|||.||+||
T Consensus 122 ~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL 201 (353)
T 4ase_A 122 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 201 (353)
T ss_dssp HHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH
Confidence 99975 8999999999764 56899999999999999997532 24589999999999999999999
Q ss_pred hhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHH
Q 001867 815 HHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVIL 894 (1002)
Q Consensus 815 H~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ 894 (1002)
|++ +||||||||+|||+++++.+||+|||+|+..............+||+.|||||++.+..|+.++|||||||++|
T Consensus 202 H~~---~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~ 278 (353)
T 4ase_A 202 ASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 278 (353)
T ss_dssp HHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred hhC---CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHH
Confidence 999 99999999999999999999999999999876655444455667999999999999999999999999999999
Q ss_pred HHHh-CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Q 001867 895 ELVT-GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVG 973 (1002)
Q Consensus 895 ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 973 (1002)
||+| |+.||........+.+.+....+. +....+++ ++.+++.+||+.||++|||++||++.|+++.
T Consensus 279 El~t~G~~Pf~~~~~~~~~~~~i~~g~~~--------~~p~~~~~----~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 279 EIFSLGASPYPGVKIDEEFCRRLKEGTRM--------RAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp HHTTTSCCSSTTCCCSHHHHHHHHHTCCC--------CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHHcCCCC--------CCCccCCH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 9998 899997655445444444332211 11122333 4788999999999999999999999999986
Q ss_pred hhc
Q 001867 974 AEN 976 (1002)
Q Consensus 974 ~~~ 976 (1002)
+.+
T Consensus 347 q~~ 349 (353)
T 4ase_A 347 QAN 349 (353)
T ss_dssp HHT
T ss_pred HHh
Confidence 544
No 27
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.1e-48 Score=478.10 Aligned_cols=553 Identities=21% Similarity=0.184 Sum_probs=338.0
Q ss_pred cCCccccCCCCCCCCCCCCCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccC
Q 001867 38 SDPDSALSSWGRNPRDDSPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQ 117 (1002)
Q Consensus 38 ~d~~~~l~sw~~~~~~~~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 117 (1002)
.|+...+++|... -+..|..+.|...... .|-++.+++ .+|..+. +++++|+|++|+|+++.|.+|.+++
T Consensus 7 ~~~~~~~~~~~~~----~p~~~~~c~~~~~~~~---~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~ 76 (635)
T 4g8a_A 7 KDDDDKLAAANSS----IPESWEPCVEVVPNIT---YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFP 76 (635)
T ss_dssp ----------------------CCSEEEETTTE---EECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CCCcchhhcccCC----CCCCCCCccccCCCCE---EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCC
Confidence 4666778888542 3445666666543332 366677777 4555443 4789999999999988888999999
Q ss_pred cccccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCcccccccccccccccccc
Q 001867 118 NLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLS 197 (1002)
Q Consensus 118 ~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 197 (1002)
+|++|||++|+|+++.+.+|.+|++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|+
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls 156 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 156 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccc
Confidence 99999999999998888889999999999999999997777889999999999999999998888889999999999999
Q ss_pred CCCCCCCCCCcccCCCCccchhhccCcccccccccccccccccc----hhcccCcccccccCcccccccceeeeeccCCc
Q 001867 198 YNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLV----DLDLALNNLVGAIPSSLTELASVVQIELYNNS 273 (1002)
Q Consensus 198 ~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 273 (1002)
+|.+....+|..++.+++|++|++++|++++..+..|..+.++. .++++.|.+....+..+.. ..+..+++.+|.
T Consensus 157 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~n~ 235 (635)
T 4g8a_A 157 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNF 235 (635)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCC
T ss_pred cCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccc-hhhhhhhhhccc
Confidence 99886667788889999999999999999988888888776655 4678888888665555543 456778888776
Q ss_pred ccCC-CCCccccccccceeeccccccCC------CCCccCCCC-CcceeecCCCccc---CcCCcccCCCcccchhcccc
Q 001867 274 LTGD-LPTGWSNLTSLRLLDASMNDLTG------PIPDDLTRL-PLESLNLYENRLE---GSLPATIADSPGLYELRLFR 342 (1002)
Q Consensus 274 l~~~-~~~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~~-~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~ 342 (1002)
.... .+..+..+..++...+..+.... .....+... .+..+.+..+... ...+..+..+.++..+.+.+
T Consensus 236 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 236 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp SSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEES
T ss_pred ccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccc
Confidence 5422 22345556666655554333221 111111111 1222332222211 12223334445555555555
Q ss_pred cccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccC--C
Q 001867 343 NRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTG--K 420 (1002)
Q Consensus 343 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~ 420 (1002)
|.+.... .+.....|+.|++++|.+.+..+. .+..|+.+.+..|.+.... ....+++|+.|++++|.+.. .
T Consensus 316 ~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~ 388 (635)
T 4g8a_A 316 VTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGC 388 (635)
T ss_dssp CEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEE
T ss_pred ccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--ccccccccccchhhccccccccc
Confidence 5554322 233445566666666666543332 2345555666665554322 23355666666666665542 2
Q ss_pred CCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCc-cccccccccccccccccccCCCCcccccc
Q 001867 421 VPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLP-EEIGFLKSLVVLSGSENKFTGSLPESLTN 499 (1002)
Q Consensus 421 ~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 499 (1002)
.+..+..+.+|+.|+++.|.+.. .+..+..+++|+.++++.|+.....+ ..+..+++++.++++.|++++..|..+..
T Consensus 389 ~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~ 467 (635)
T 4g8a_A 389 CSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 467 (635)
T ss_dssp CCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred cccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 33344455566666666665543 23345556666666666555544433 24455666666666666666555556666
Q ss_pred cccCCeeecCCCcC-CcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceE
Q 001867 500 LAELGSLDLHANDL-SGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQL 577 (1002)
Q Consensus 500 l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l 577 (1002)
++.|+.|+|++|.+ .+.+|..|..+++|++|+|++|+|++.+|..|+++++|++|+|++|+|++.+|..++.+ +|++|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 66666666666653 33455566666666666666666665556666666666666666666665555555555 56666
Q ss_pred EeccccCcCCCChhhh---hhcccccccCCCCCCC
Q 001867 578 NVSNNRLSGELPSLFA---KEMYRNSFLGNPGLCG 609 (1002)
Q Consensus 578 ~ls~N~l~g~~p~~~~---~~~~~~~~~~n~~~cg 609 (1002)
||++|+|++.+|.... ..+....+.||||.|.
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 6666666665554321 2344455566666663
No 28
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.5e-49 Score=429.71 Aligned_cols=269 Identities=24% Similarity=0.267 Sum_probs=202.9
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|.+.++||+|+||+||+|++ +|+.||||++... ......++.|+..+.+++|||||+++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~------------------~~~~~~~e~Ei~~~~~l~HpNIv~l~ 63 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------------------EERSWFREAEIYQTVMLRHENILGFI 63 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG------------------GHHHHHHHHHHHTSTTCCCTTBCCEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc------------------chhhHHHHHHHHHHhcCCCCCCCcEE
Confidence 4567778999999999999998 4899999998321 12223345567777788999999999
Q ss_pred eEEecCC----eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeeCCCCCCcEE
Q 001867 763 CCCTTRD----CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDC-----VPSIVHRDVKSNNIL 833 (1002)
Q Consensus 763 ~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~iiHrDlk~~NIl 833 (1002)
+++.+++ ..|+||||+++|+|.++++. ..++|..+.+++.|++.||+|||+++ .++||||||||+|||
T Consensus 64 g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NIL 140 (303)
T 3hmm_A 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 140 (303)
T ss_dssp EEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEE
T ss_pred EEEEecCCCceEEEEEecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEE
Confidence 9998654 57999999999999999975 45899999999999999999999762 358999999999999
Q ss_pred ECCCCCeEEccccCcccccCCCCCc--ccccccccccccCccccccC------CCCCccchhhHHHHHHHHHhCCCCCCC
Q 001867 834 LDGDFGARVADFGVAKVVDASGKPK--SMSVIAGSCGYIAPEYAYTL------RVNEKSDIYSFGVVILELVTGRLPVDP 905 (1002)
Q Consensus 834 l~~~~~~kl~DfGl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~ell~g~~p~~~ 905 (1002)
++.++++||+|||+|+......... .....+||+.|||||++.+. .++.++|||||||++|||+||+.||..
T Consensus 141 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 141 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred ECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 9999999999999998876543322 12345799999999998754 367899999999999999999877643
Q ss_pred CCC----------chhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 906 EFG----------EKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 906 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
... .......+.........+..+.... ...+....+.+++.+||+.||++||||+||++.|+++...
T Consensus 221 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 221 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW--QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG--GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cccccccchhcccccchHHHHHHHHhcccCCCCCCccc--cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 211 1111122222222222211111111 1224556788999999999999999999999999998654
No 29
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=472.54 Aligned_cols=452 Identities=20% Similarity=0.213 Sum_probs=251.5
Q ss_pred EEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCcccccccccc
Q 001867 73 SIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNN 152 (1002)
Q Consensus 73 ~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~ 152 (1002)
.+|+++++++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+|++..|..|+++++|++|+|++|+
T Consensus 4 ~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 46677777663 444444 566666666666666555666666666666666666666556666666666666666666
Q ss_pred ccCCCCcccccccccceeeeccccccC-ccccccccccccccccccCCCCCCCCCCcccCCCCcc--chhhccCccc--c
Q 001867 153 FSGDIPESFGRFQKLEVISLVYNLLDG-TIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNL--EILWLTECNL--V 227 (1002)
Q Consensus 153 l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L--~~L~L~~n~l--~ 227 (1002)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++.. ..+..+++| ++|++++|++ .
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeeccccccc
Confidence 66 34444 56666666666666654 245566666666666666665421 234444444 5555555555 4
Q ss_pred ccccccccccc-ccchhcccCcccccccCc-ccccccceeeeeccCCc-------ccCCCCCccccccccceeecccccc
Q 001867 228 GEIPDSLGRLA-KLVDLDLALNNLVGAIPS-SLTELASVVQIELYNNS-------LTGDLPTGWSNLTSLRLLDASMNDL 298 (1002)
Q Consensus 228 ~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~Ls~N~l 298 (1002)
+..|..+..+. +...+++++|++.+.++. .+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~-- 230 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNI-- 230 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEE--
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccc--
Confidence 44444444433 222334444444332222 33344444444444443 333322 3334444444444443
Q ss_pred CCCCCccCCCCCcceeecCCCcccCcCCcccC---CCcccchhcccccccCCCCCCCC-----CCCCCCceEEccCcccc
Q 001867 299 TGPIPDDLTRLPLESLNLYENRLEGSLPATIA---DSPGLYELRLFRNRLNGTLPGDL-----GKNSPLRWVDLSNNQFT 370 (1002)
Q Consensus 299 ~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~ 370 (1002)
.+++..+..+. ..++|++|++++|++++.+|..+ ..++.|+.+++++|.+
T Consensus 231 ---------------------~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~- 288 (520)
T 2z7x_B 231 ---------------------ETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF- 288 (520)
T ss_dssp ---------------------EEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-
T ss_pred ---------------------ccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-
Confidence 33321111110 12355555555555555555555 5566666666666666
Q ss_pred CCCC-hhhhcc---CcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccc
Q 001867 371 GEIP-ASLCEK---GELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEIS 446 (1002)
Q Consensus 371 ~~~p-~~~~~l---~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~ 446 (1002)
.+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..
T Consensus 289 -~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~------------------- 346 (520)
T 2z7x_B 289 -GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGH------------------- 346 (520)
T ss_dssp -CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCC-------------------
T ss_pred -ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhcc-------------------
Confidence 333 334333 44555555555544221 1134455555555555555544544444
Q ss_pred cccccCCcccEEEccCCcCCC--CCccccccccccccccccccccCCCCcc-cccccccCCeeecCCCcCCccccccccc
Q 001867 447 KNIAGAANLSLLIISKNNLSG--SLPEEIGFLKSLVVLSGSENKFTGSLPE-SLTNLAELGSLDLHANDLSGELPSSVSS 523 (1002)
Q Consensus 447 ~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 523 (1002)
+++|+.|++++|++++ .+|..++.+++|+.|++++|++++.+|. .+..+++|+.|+|++|++++.+|..+.
T Consensus 347 -----l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~- 420 (520)
T 2z7x_B 347 -----LTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP- 420 (520)
T ss_dssp -----CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC-
T ss_pred -----CCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc-
Confidence 4455555555555543 3345556666666666666666654544 356667777777777777766666554
Q ss_pred ccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCc-cccc-ccceEEeccccCcCCCCh
Q 001867 524 WKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVG-LQNL-KLNQLNVSNNRLSGELPS 590 (1002)
Q Consensus 524 l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~-~~~l-~L~~l~ls~N~l~g~~p~ 590 (1002)
++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|.. +..+ +|+.|++++|++++..+.
T Consensus 421 -~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 421 -PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp -TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred -ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 67777777777777 67777777777777777777777 35554 6666 677777888877776553
No 30
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9e-49 Score=417.80 Aligned_cols=249 Identities=24% Similarity=0.369 Sum_probs=190.8
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++.+.. .......+++.+|++++++++|||||+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--------------~~~~~~~~~~~~Ei~il~~l~HpnIv~ 77 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKV--------------LAKSDMQGRIEREISYLRLLRHPHIIK 77 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------------------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHH--------------cCCHHHHHHHHHHHHHHHHCCCCCCCe
Confidence 46899999999999999999996 568999999985432 122334567999999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+++..|+||||+ +|+|.+++.. .+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++++
T Consensus 78 ~~~~~~~~~~~~ivmEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~v 151 (275)
T 3hyh_A 78 LYDVIKSKDEIIMVIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNV 151 (275)
T ss_dssp EEEEEECSSEEEEEEECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCE
T ss_pred EEEEEEECCEEEEEEeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCE
Confidence 999999999999999999 7899999974 45699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||+|+...... .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||.... .....+.+..
T Consensus 152 kl~DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-~~~~~~~i~~- 226 (275)
T 3hyh_A 152 KIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-IPVLFKNISN- 226 (275)
T ss_dssp EECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHH-
T ss_pred EEeecCCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHc-
Confidence 999999998765432 2234689999999999998876 579999999999999999999997542 2222222211
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... +. ....+ ++.+++.+|++.||++|||++|+++
T Consensus 227 ---~~~~--~p---~~~s~----~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 227 ---GVYT--LP---KFLSP----GAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---TCCC--CC---TTSCH----HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---CCCC--CC---CCCCH----HHHHHHHHHccCChhHCcCHHHHHc
Confidence 1110 01 11222 4778999999999999999999875
No 31
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4e-49 Score=473.19 Aligned_cols=480 Identities=22% Similarity=0.239 Sum_probs=391.3
Q ss_pred CEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccc
Q 001867 96 TFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYN 175 (1002)
Q Consensus 96 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 175 (1002)
...++++|.++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|+.|+++++|++|+|++|
T Consensus 8 ~~c~~~~~~l~~-ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 8 GVCDGRSRSFTS-IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp SEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ceEECCCCcccc-ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 346788889984 666554 79999999999999888999999999999999999999888899999999999999999
Q ss_pred cccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCccccccc-ccccccccccchhcccCccccccc
Q 001867 176 LLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEI-PDSLGRLAKLVDLDLALNNLVGAI 254 (1002)
Q Consensus 176 ~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~ 254 (1002)
++++.+|..|+++++|++|+|++|++.....|..++++++|++|++++|++.+.+ +..|..+++|++|++++|++++..
T Consensus 85 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 164 (549)
T 2z81_A 85 HLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQ 164 (549)
T ss_dssp CCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred ccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccC
Confidence 9999988889999999999999999854466788999999999999999844445 468999999999999999999999
Q ss_pred CcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCC--CccCCC--CCcceeecCCCcccCcCCcccC
Q 001867 255 PSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPI--PDDLTR--LPLESLNLYENRLEGSLPATIA 330 (1002)
Q Consensus 255 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~--~~L~~L~L~~N~l~~~~p~~~~ 330 (1002)
|..+..+++|+.|++++|.+.......+..+++|++|++++|++++.. |..+.. ..|+.|++++|.+++..+..+
T Consensus 165 ~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l- 243 (549)
T 2z81_A 165 SQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL- 243 (549)
T ss_dssp TTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHH-
T ss_pred hhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHH-
Confidence 999999999999999999987433333466899999999999998642 111111 125555555555543332221
Q ss_pred CCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCC------ChhhhccCcccceeeeccccccC-----CCC
Q 001867 331 DSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEI------PASLCEKGELEELLMIYNSFTGQ-----LPD 399 (1002)
Q Consensus 331 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~------p~~~~~l~~L~~L~l~~N~l~~~-----~p~ 399 (1002)
+..+..+++|+.+++++|.+.+.. ...+..+++|+.|.+.++.+... ++.
T Consensus 244 -------------------~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~ 304 (549)
T 2z81_A 244 -------------------LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLST 304 (549)
T ss_dssp -------------------HGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCH
T ss_pred -------------------HHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchh
Confidence 223456788999999999988642 23456678899999999887532 122
Q ss_pred cCcCCCCCcEEEccCccccCCCCCcC-CCCCcceEEEcccCcccCcccc---ccccCCcccEEEccCCcCCCCCc--ccc
Q 001867 400 GLGHCQSLTRVRLGYNRLTGKVPPLL-WGLPHVYLLELTDNFLSGEISK---NIAGAANLSLLIISKNNLSGSLP--EEI 473 (1002)
Q Consensus 400 ~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~i~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p--~~~ 473 (1002)
.+..+.+|+.|++++|+++ .+|..+ ..+++|+.|++++|++.+..+. .++.+++|+.|++++|++++..+ ..+
T Consensus 305 ~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 383 (549)
T 2z81_A 305 VYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 383 (549)
T ss_dssp HHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHG
T ss_pred hhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhh
Confidence 2344578999999999998 566665 5799999999999999987643 47889999999999999985432 568
Q ss_pred ccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccE
Q 001867 474 GFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNY 553 (1002)
Q Consensus 474 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~ 553 (1002)
+.+++|+.|++++|+++ .+|..+..+++|++|+|++|++++ +|..+. ++|+.|+|++|++++.+ +.+++|++
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~ 455 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQE 455 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCE
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcE
Confidence 99999999999999999 789999999999999999999984 454442 68999999999999643 57999999
Q ss_pred EeCcceeeecccCCccccc-ccceEEeccccCcCCCChh--hhhhcccccccCCCCCCC
Q 001867 554 LDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSL--FAKEMYRNSFLGNPGLCG 609 (1002)
Q Consensus 554 L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~~n~~~cg 609 (1002)
|+|++|+|+ .+|.. ..+ +|+.|||++|++++.+|.. ....+....+.+||+.|.
T Consensus 456 L~Ls~N~l~-~ip~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 456 LYISRNKLK-TLPDA-SLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp EECCSSCCS-SCCCG-GGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred EECCCCccC-cCCCc-ccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 999999999 68874 456 8999999999999988864 445677788999998765
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.7e-49 Score=483.95 Aligned_cols=460 Identities=20% Similarity=0.252 Sum_probs=317.2
Q ss_pred CCCCEEeccCCCCCCCCCCCccccCccccccc-ccccccCCCCcccccc----C-----Cccccccc-------cccccC
Q 001867 93 ENLTFLTLFNNSINSTLPDDISACQNLQHLDL-SQNLLTGTLTPALADL----P-----NLKFLDLT-------GNNFSG 155 (1002)
Q Consensus 93 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~~~~~~~L----~-----~L~~L~Ls-------~N~l~~ 155 (1002)
.+++.|+|++|.+.|.+|.+|++|++|++|+| ++|.++|..|...... . .++..++. ...+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 47899999999999999999999999999999 8999987644321111 1 01100000 000110
Q ss_pred -----------CCCcccccccccceeeecc--ccccCccccccccccccccccccCCCCCCC-----------------C
Q 001867 156 -----------DIPESFGRFQKLEVISLVY--NLLDGTIPAFLGNISTLKMLNLSYNPFLPG-----------------R 205 (1002)
Q Consensus 156 -----------~~p~~~~~l~~L~~L~L~~--N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~-----------------~ 205 (1002)
..+........++.+.+.. |++++ +|..|+++++|++|+|++|++. + .
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Ls-g~~i~~~~~~~s~n~~~g~ 480 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFT-YDNIAVDWEDANSDYAKQY 480 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCC-GGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCC-CCccccccccccccccccc
Confidence 1111112334555565654 99998 8999999999999999999974 4 3
Q ss_pred CCcccC--CCCccchhhccCcccccccccccccccccchhcccCcc-ccc-ccCccccccc-------ceeeeeccCCcc
Q 001867 206 IPPELG--NLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNN-LVG-AIPSSLTELA-------SVVQIELYNNSL 274 (1002)
Q Consensus 206 ~p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~l~~l~-------~L~~L~L~~N~l 274 (1002)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+..++ +|+.|+|++|++
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 899988 99999999999999999999999999999999999998 998 8898888777 999999999999
Q ss_pred cCCCCC--ccccccccceeeccccccCCCCCccCCCCC-cceeecCCCcccCcCCcccCCCcc-cchhcccccccCCCCC
Q 001867 275 TGDLPT--GWSNLTSLRLLDASMNDLTGPIPDDLTRLP-LESLNLYENRLEGSLPATIADSPG-LYELRLFRNRLNGTLP 350 (1002)
Q Consensus 275 ~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p 350 (1002)
+ .+|. .+.++++|+.|+|++|+++ .+| .+..++ |+.|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp 635 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIP 635 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCC
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCc
Confidence 9 8888 8999999999999999998 777 666654 888888888877 67777777777 777777777777 566
Q ss_pred CCCCCCCC--CceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCc-CCC
Q 001867 351 GDLGKNSP--LRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPL-LWG 427 (1002)
Q Consensus 351 ~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~ 427 (1002)
..+..++. |+.|+|++|++++.+|...+... ...+.+|+.|+|++|+++. +|.. +..
T Consensus 636 ~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~-------------------~~~~~~L~~L~Ls~N~L~~-lp~~~~~~ 695 (876)
T 4ecn_A 636 NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMD-------------------DYKGINASTVTLSYNEIQK-FPTELFAT 695 (876)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTT-------------------TCCCCCEEEEECCSSCCCS-CCHHHHHT
T ss_pred hhhhccccCCCCEEECcCCcCCCccccchhhhc-------------------cccCCCcCEEEccCCcCCc-cCHHHHcc
Confidence 66665543 77777777777765543221110 0012245555555555552 2222 224
Q ss_pred CCcceEEEcccCcccCccccccc-------cCCcccEEEccCCcCCCCCccccc--cccccccccccccccCCCCccccc
Q 001867 428 LPHVYLLELTDNFLSGEISKNIA-------GAANLSLLIISKNNLSGSLPEEIG--FLKSLVVLSGSENKFTGSLPESLT 498 (1002)
Q Consensus 428 l~~L~~L~L~~N~i~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~ 498 (1002)
+++|+.|+|++|+|+.+.+..+. ++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+.
T Consensus 696 l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~ 773 (876)
T 4ecn_A 696 GSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPL 773 (876)
T ss_dssp TCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGG
T ss_pred CCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhh
Confidence 45555555555555522222222 2337788888888887 6777776 78888888888888885 677788
Q ss_pred ccccCCeeecCC------CcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc
Q 001867 499 NLAELGSLDLHA------NDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL 572 (1002)
Q Consensus 499 ~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l 572 (1002)
.+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|.+ +.+|..+. ++|+.|||++|++....+..+...
T Consensus 774 ~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~ 850 (876)
T 4ecn_A 774 NSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPY 850 (876)
T ss_dssp GCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHH
T ss_pred cCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHcccc
Confidence 888888888876 555566666666666666666666666 45665544 456666666666554444444333
Q ss_pred -ccceEEeccccC
Q 001867 573 -KLNQLNVSNNRL 584 (1002)
Q Consensus 573 -~L~~l~ls~N~l 584 (1002)
.+..+.|+.|++
T Consensus 851 ~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 851 IEAGMYVLLYDKT 863 (876)
T ss_dssp HHTTCCEEECCTT
T ss_pred ccchheeecCCCc
Confidence 344444544443
No 33
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.4e-48 Score=438.78 Aligned_cols=249 Identities=25% Similarity=0.334 Sum_probs=205.7
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
+.|++.++||+|+||.||+|+.+ +|+.||||++... .....+.+.+|+.+|++++|||||++
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~-----------------~~~~~~~~~~Ei~il~~l~HpnIV~l 213 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR-----------------KQQRRELLFNEVVIMRDYQHENVVEM 213 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEST-----------------TCSSGGGHHHHHHHHHHCCCTTBCCE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEecc-----------------chhHHHHHHHHHHHHHhCCCCCCCce
Confidence 46888899999999999999974 6899999998532 12234568999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
+++|.+++.+|+||||++||+|.++++. +.+++..++.++.||+.||+|||++ +||||||||+|||++.+|.+|
T Consensus 214 ~~~~~~~~~~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vK 287 (423)
T 4fie_A 214 YNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVK 287 (423)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEE
T ss_pred EEEEEECCEEEEEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEE
Confidence 9999999999999999999999999974 3599999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
|+|||+|+.+..... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +....+...
T Consensus 288 l~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~-- 362 (423)
T 4fie_A 288 LSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDN-- 362 (423)
T ss_dssp ECCCTTCEECCSSCC--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHS--
T ss_pred EecCccceECCCCCc--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcC--
Confidence 999999987755432 234568999999999999999999999999999999999999999755322 222222111
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
..... +......+ .+.+++.+||+.||++|||++|+++
T Consensus 363 --~~~~~--~~~~~~s~----~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 363 --LPPRL--KNLHKVSP----SLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp --CCCCC--SCTTSSCH----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CCCCC--cccccCCH----HHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11000 11122222 4778999999999999999999864
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-49 Score=469.68 Aligned_cols=451 Identities=22% Similarity=0.233 Sum_probs=317.4
Q ss_pred CEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccc
Q 001867 96 TFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYN 175 (1002)
Q Consensus 96 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 175 (1002)
++|++++|+++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|+.|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 467777777763 555554 67777777777777665566777777777777777777666666777777777777777
Q ss_pred cccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCccccccccccccccccc--chhcccCccc--c
Q 001867 176 LLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKL--VDLDLALNNL--V 251 (1002)
Q Consensus 176 ~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 251 (1002)
+++ .+|.. .+++|++|+|++|++....+|..|+++++|++|++++|++++ ..+..+++| ++|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 666 34433 566666666666665333445555555555555555555543 233333333 4444444444 3
Q ss_pred cccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCC
Q 001867 252 GAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIAD 331 (1002)
Q Consensus 252 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 331 (1002)
+..|..+..+.. +...+++++|++.+.+ .+..+..
T Consensus 154 ~~~~~~l~~l~~-----------------------~~l~l~l~~n~~~~~~----------------------~~~~~~~ 188 (520)
T 2z7x_B 154 KEDPEGLQDFNT-----------------------ESLHIVFPTNKEFHFI----------------------LDVSVKT 188 (520)
T ss_dssp SCCTTTTTTCCE-----------------------EEEEEECCSSSCCCCC----------------------CCCCCTT
T ss_pred cccccccccccc-----------------------ceEEEEeccCcchhhh----------------------hhhhhhc
Confidence 333333333221 1112233333332211 1123344
Q ss_pred Ccccchhcccccc-------cCCCCCCCCCCCCCCceEEccCccccCCCChhhh---ccCcccceeeeccccccCCCCcC
Q 001867 332 SPGLYELRLFRNR-------LNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLC---EKGELEELLMIYNSFTGQLPDGL 401 (1002)
Q Consensus 332 l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~~p~~l 401 (1002)
+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+++..+..+. ..++|++|++++|.+++.+|..+
T Consensus 189 l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~ 267 (520)
T 2z7x_B 189 VANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRD 267 (520)
T ss_dssp CSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCC
T ss_pred ccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccch
Confidence 4555555555554 333444 566777888888888887754333322 24588999999999988888888
Q ss_pred -----cCCCCCcEEEccCccccCCCC-CcCCCC---CcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccc
Q 001867 402 -----GHCQSLTRVRLGYNRLTGKVP-PLLWGL---PHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEE 472 (1002)
Q Consensus 402 -----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 472 (1002)
+++++|+.+++++|.+ .+| ..++.+ .+|+.|++++|.+.... .+..+++|+.|++++|++++.+|..
T Consensus 268 ~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~ 343 (520)
T 2z7x_B 268 FDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFEN 343 (520)
T ss_dssp CCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTT
T ss_pred hhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhh
Confidence 8899999999999998 455 455444 67999999999987543 1267899999999999999989999
Q ss_pred cccccccccccccccccCC--CCcccccccccCCeeecCCCcCCccccc-ccccccccccccccCcccccCCCCCccccc
Q 001867 473 IGFLKSLVVLSGSENKFTG--SLPESLTNLAELGSLDLHANDLSGELPS-SVSSWKKLNELNLADNLFYGNIPEDIGNLS 549 (1002)
Q Consensus 473 ~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~ 549 (1002)
++.+++|+.|++++|++++ .+|..++.+++|++|||++|++++.+|. .+..+++|+.|+|++|.+++.+|..+. +
T Consensus 344 ~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~ 421 (520)
T 2z7x_B 344 CGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--P 421 (520)
T ss_dssp CCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--T
T ss_pred hccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--c
Confidence 9999999999999999996 5667899999999999999999985665 589999999999999999998888776 7
Q ss_pred cccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChh---hhhhcccccccCCCCCCC
Q 001867 550 VLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSL---FAKEMYRNSFLGNPGLCG 609 (1002)
Q Consensus 550 ~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~---~~~~~~~~~~~~n~~~cg 609 (1002)
+|++|+|++|+++ .+|..+..+ +|+.|+|++|+|++ +|.. ....+....+.+||+.|.
T Consensus 422 ~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 422 RIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp TCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCccc
Confidence 9999999999999 789888788 89999999999995 5543 345667788999999986
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.4e-48 Score=422.08 Aligned_cols=244 Identities=25% Similarity=0.304 Sum_probs=192.8
Q ss_pred cCCCcCCeeeecCCccEEEEEEc----CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS----NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|++.+.||+|+||+||+|+.. +++.||||++.+... ......++.+|++++++++||||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~---------------~~~~~~~~~~E~~il~~l~HpnI 88 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL---------------KVRDRVRTKMERDILVEVNHPFI 88 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE---------------EEEECC------CCCCCCCCTTE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc---------------ChHHHHHHHHHHHHHHHCCCCCC
Confidence 46888899999999999999862 468899999854321 11223468889999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
|++++++.+++..|+||||++||+|.+++.. .+.+++..+..++.||+.||+|||++ +||||||||+|||++.+|
T Consensus 89 v~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g 163 (304)
T 3ubd_A 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEG 163 (304)
T ss_dssp ECEEEEEEETTEEEEEECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTS
T ss_pred CeEEEEEEECCEEEEEEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCC
Confidence 9999999999999999999999999999985 35699999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS 918 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~ 918 (1002)
.+||+|||+|+....... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+....+.
T Consensus 164 ~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~~i~- 239 (304)
T 3ubd_A 164 HIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KETMTMIL- 239 (304)
T ss_dssp CEEEESSEEEEC-----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH-
T ss_pred CEEecccccceeccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-HHHHHHHH-
Confidence 999999999986544322 23356899999999999999999999999999999999999999976532 22222221
Q ss_pred HhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 001867 919 TLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAM 962 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 962 (1002)
. .... ......+ ++.+++.+||+.||++|||+
T Consensus 240 --~-~~~~-----~p~~~s~----~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 240 --K-AKLG-----MPQFLSP----EAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --H-CCCC-----CCTTSCH----HHHHHHHHHTCSSGGGSTTC
T ss_pred --c-CCCC-----CCCcCCH----HHHHHHHHHcccCHHHCCCC
Confidence 1 1110 0112222 47789999999999999985
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5e-47 Score=412.39 Aligned_cols=252 Identities=21% Similarity=0.355 Sum_probs=188.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++.... .....+.+.+|++++++++|||||+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~----------------~~~~~~~~~~E~~il~~l~HpnIV~ 67 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN----------------RELAREKVMREVKALAKLEHPGIVR 67 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS----------------SHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC----------------CHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 34688889999999999999996 468999999985321 2344567999999999999999999
Q ss_pred eeeEEecCC------------eeeEEEeccCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCC
Q 001867 761 LWCCCTTRD------------CKLLVYEYMPNGSLGDLLHSCKG-GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDV 827 (1002)
Q Consensus 761 l~~~~~~~~------------~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl 827 (1002)
++++|.+.+ ..|+||||+++|+|.++++.... ...++..++.++.||+.||+|||++ +||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDl 144 (299)
T 4g31_A 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDL 144 (299)
T ss_dssp EEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred EEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccC
Confidence 999997544 36999999999999999985332 3456677899999999999999999 9999999
Q ss_pred CCCcEEECCCCCeEEccccCcccccCCCCCc----------ccccccccccccCccccccCCCCCccchhhHHHHHHHHH
Q 001867 828 KSNNILLDGDFGARVADFGVAKVVDASGKPK----------SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELV 897 (1002)
Q Consensus 828 k~~NIll~~~~~~kl~DfGl~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 897 (1002)
||+|||++.++.+||+|||+|+......... ..+..+||+.|||||++.+..|+.++||||+||++|||+
T Consensus 145 Kp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell 224 (299)
T 4g31_A 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224 (299)
T ss_dssp CGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred cHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHc
Confidence 9999999999999999999998876543211 123457999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 898 TGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 898 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+ ||... .+....+... ...... + .+.+......+++.+||+.||++|||+.|+++
T Consensus 225 ~---Pf~~~---~~~~~~~~~~-~~~~~p----~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 225 Y---PFSTQ---MERVRTLTDV-RNLKFP----P----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp S---CCSSH---HHHHHHHHHH-HTTCCC----H----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c---CCCCc---cHHHHHHHHH-hcCCCC----C----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 6 77532 1211111111 111111 1 11222234567999999999999999999875
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.3e-46 Score=454.45 Aligned_cols=520 Identities=21% Similarity=0.190 Sum_probs=428.8
Q ss_pred ceeEEeCC---------CCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCccccccccccccc
Q 001867 60 RGVECDPR---------SHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLT 130 (1002)
Q Consensus 60 ~gv~C~~~---------~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 130 (1002)
..|.|... +..++.|||++|+|++..+.+|.++++|++|+|++|+|+++.|++|.+|++|++|+|++|+|+
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 35778532 246999999999999988899999999999999999999988999999999999999999999
Q ss_pred CCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCc-cccccccccccccccccCCCCCCCCCCcc
Q 001867 131 GTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGT-IPAFLGNISTLKMLNLSYNPFLPGRIPPE 209 (1002)
Q Consensus 131 ~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~ 209 (1002)
+..+..|.+|++|++|+|++|++++..+..|+++++|++|+|++|++++. .|..++++++|++|+|++|++ .+..+..
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l-~~~~~~~ 192 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI-QSIYCTD 192 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC-CEECGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc-ccccccc
Confidence 87778899999999999999999988888899999999999999999864 688899999999999999997 3455666
Q ss_pred cCCCCccc----hhhccCcccccccccccccccccchhcccCccccc-ccCcccccccceeeeeccCC------cccCCC
Q 001867 210 LGNLTNLE----ILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVG-AIPSSLTELASVVQIELYNN------SLTGDL 278 (1002)
Q Consensus 210 ~~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~N------~l~~~~ 278 (1002)
+..+.+++ .++++.|.++...+..+ ....+..+++.+|.... ..+..+.++..++...+..+ .+....
T Consensus 193 l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 271 (635)
T 4g8a_A 193 LRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 271 (635)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred ccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccc
Confidence 76666554 47788999986555544 44567889999887653 33455667777776655433 233344
Q ss_pred CCccccccccceeeccccccCCCCCc---cCCCC-CcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCC
Q 001867 279 PTGWSNLTSLRLLDASMNDLTGPIPD---DLTRL-PLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLG 354 (1002)
Q Consensus 279 ~~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 354 (1002)
...+..+..+...++..+........ .+... .++.+++.+|.+.... .+....+|+.|++.+|++.+..+.
T Consensus 272 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~--- 346 (635)
T 4g8a_A 272 KSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL--- 346 (635)
T ss_dssp TTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---
T ss_pred ccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---
Confidence 45667777777777776665432222 22222 3888999888887543 355677899999999999866554
Q ss_pred CCCCCceEEccCccccCCCChhhhccCcccceeeecccccc--CCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcce
Q 001867 355 KNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTG--QLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVY 432 (1002)
Q Consensus 355 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 432 (1002)
.+..|+.+++++|.+.... ....+++|+.|++++|.+.. ..+..+..+.+|+.++++.|.+.. .+..+..+++|+
T Consensus 347 ~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~ 423 (635)
T 4g8a_A 347 KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLE 423 (635)
T ss_dssp BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCC
T ss_pred cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-cccccccccccc
Confidence 4567899999999987433 34578899999999998863 456667788999999999999884 566788999999
Q ss_pred EEEcccCcccCccc-cccccCCcccEEEccCCcCCCCCccccccccccccccccccccC-CCCcccccccccCCeeecCC
Q 001867 433 LLELTDNFLSGEIS-KNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFT-GSLPESLTNLAELGSLDLHA 510 (1002)
Q Consensus 433 ~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~ 510 (1002)
.+++++|......+ ..+..+.+++.++++.|++.+..|..+..+++|+.|++++|++. +..|..|..+++|+.|||++
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~ 503 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCC
Confidence 99999888776544 55788999999999999999999999999999999999999854 45788999999999999999
Q ss_pred CcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc--ccceEEeccccCcCCC
Q 001867 511 NDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL--KLNQLNVSNNRLSGEL 588 (1002)
Q Consensus 511 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l--~L~~l~ls~N~l~g~~ 588 (1002)
|+|++.+|..|+++++|++|+|++|+|++..|..|.++++|++|||++|+|++.+|..++.+ +|+.|+|++|+++..-
T Consensus 504 N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 504 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999999999999999999999998888899999999999999999999999999887 6999999999998654
Q ss_pred C
Q 001867 589 P 589 (1002)
Q Consensus 589 p 589 (1002)
.
T Consensus 584 ~ 584 (635)
T 4g8a_A 584 E 584 (635)
T ss_dssp G
T ss_pred C
Confidence 3
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.1e-46 Score=445.91 Aligned_cols=456 Identities=21% Similarity=0.220 Sum_probs=300.1
Q ss_pred EEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccc
Q 001867 72 ASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGN 151 (1002)
Q Consensus 72 ~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N 151 (1002)
..+|++++++++ +|..+. ++|++|+|++|.+++..|.+|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 779999999996 565554 79999999999999888889999999999999999999888888999999999999999
Q ss_pred cccCCCCcccccccccceeeeccccccCc-cccccccccccccccccCCCCCCCCCCcccCCCCcc--chhhccCccc--
Q 001867 152 NFSGDIPESFGRFQKLEVISLVYNLLDGT-IPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNL--EILWLTECNL-- 226 (1002)
Q Consensus 152 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L--~~L~L~~n~l-- 226 (1002)
+++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|+|++|++.. ..+..+++| ++|++++|++
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ----LDLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT----TTTGGGTTSCEEEEEEEESSCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc----CchhhhhhceeeEEEeecccccc
Confidence 998 56665 788999999999998863 46788888888888888888632 234444444 8888888877
Q ss_pred cccccccccccc--ccchhcccCcccccccCc-ccccccceeeeeccCCc-----ccCCCCCccccccccceeecccccc
Q 001867 227 VGEIPDSLGRLA--KLVDLDLALNNLVGAIPS-SLTELASVVQIELYNNS-----LTGDLPTGWSNLTSLRLLDASMNDL 298 (1002)
Q Consensus 227 ~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~-----l~~~~~~~~~~l~~L~~L~Ls~N~l 298 (1002)
++..|..+..+. .+ .++++.|.+.+.++. .+..+++|+.+++++|+ +.+. ...+..+++|+.|+++++.+
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEE
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcC
Confidence 667777776654 23 446666666654443 34556666666666663 1111 12344455555555554444
Q ss_pred CCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCC-----CCCCCCceEEccCccccCCC
Q 001867 299 TGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDL-----GKNSPLRWVDLSNNQFTGEI 373 (1002)
Q Consensus 299 ~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~ 373 (1002)
++ |.+.+..+ .+ ..++|++|++++|++++.+|..+ ..++.|+.++++.|.+ .+
T Consensus 262 ~~------------------~~~~~~~~-~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~ 319 (562)
T 3a79_B 262 TW------------------KCSVKLFQ-FF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LF 319 (562)
T ss_dssp CH------------------HHHHHHHH-HH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SS
T ss_pred cH------------------HHHHHHHH-hh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ec
Confidence 32 22221111 11 12356666666666666666555 5555556666666655 23
Q ss_pred C-hhhhcc---CcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCcccccc
Q 001867 374 P-ASLCEK---GELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNI 449 (1002)
Q Consensus 374 p-~~~~~l---~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~ 449 (1002)
| ..+..+ .+|++|++++|.+.... ..+.+++|++|++++|++++..|.. +
T Consensus 320 p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~------------------------~ 373 (562)
T 3a79_B 320 SKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQG------------------------C 373 (562)
T ss_dssp CHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTT------------------------C
T ss_pred ChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhh------------------------h
Confidence 3 222221 34555555555543211 1134455555555555555444444 4
Q ss_pred ccCCcccEEEccCCcCCC--CCccccccccccccccccccccCCCCcc-cccccccCCeeecCCCcCCcccccccccccc
Q 001867 450 AGAANLSLLIISKNNLSG--SLPEEIGFLKSLVVLSGSENKFTGSLPE-SLTNLAELGSLDLHANDLSGELPSSVSSWKK 526 (1002)
Q Consensus 450 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 526 (1002)
..+++|+.|++++|++++ .+|..++.+++|+.|++++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++
T Consensus 374 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~ 451 (562)
T 3a79_B 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PK 451 (562)
T ss_dssp CSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TT
T ss_pred cccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--Cc
Confidence 445555555555555553 2234566666666677777776653443 466777777788888877777666654 67
Q ss_pred cccccccCcccccCCCCCccccccccEEeCcceeeecccCCc-cccc-ccceEEeccccCcCCCChh
Q 001867 527 LNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVG-LQNL-KLNQLNVSNNRLSGELPSL 591 (1002)
Q Consensus 527 L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~-~~~l-~L~~l~ls~N~l~g~~p~~ 591 (1002)
|+.|+|++|+++ .+|..+..+++|++|+|++|+|+ .+|.. +..+ +|+.|+|++|++++..|-.
T Consensus 452 L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 452 VKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp CSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred CCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 888888888887 67777778888888888888888 45555 6666 6888888888888776643
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.9e-46 Score=444.96 Aligned_cols=440 Identities=22% Similarity=0.243 Sum_probs=312.9
Q ss_pred CeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCcccccc
Q 001867 69 HSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDL 148 (1002)
Q Consensus 69 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~L 148 (1002)
.+++.|||++|++++..|..|.++++|++|+|++|+++++.|++|.++++|++|+|++|.|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999988899999999999999999999999999999999999999999999 56665 8999999999
Q ss_pred ccccccC-CCCcccccccccceeeeccccccCcccccccccccc--ccccccCCCCC-CCCCCcccCCCC--ccchhhcc
Q 001867 149 TGNNFSG-DIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTL--KMLNLSYNPFL-PGRIPPELGNLT--NLEILWLT 222 (1002)
Q Consensus 149 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~Ls~N~~~-~~~~p~~~~~l~--~L~~L~L~ 222 (1002)
++|++++ .+|..|+++++|++|+|++|++++. .+.++++| ++|+|++|++. .+..|..+..+. .+ .++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~ 204 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFH 204 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEEC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEec
Confidence 9999997 3578999999999999999999864 45555665 99999999861 356677777765 33 55889
Q ss_pred Cccccccccc-ccccccccchhcccCcc-----cccccCcccccccceeeeeccCCcccCCCCCc---cccccccceeec
Q 001867 223 ECNLVGEIPD-SLGRLAKLVDLDLALNN-----LVGAIPSSLTELASVVQIELYNNSLTGDLPTG---WSNLTSLRLLDA 293 (1002)
Q Consensus 223 ~n~l~~~~p~-~~~~l~~L~~L~L~~N~-----l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~---~~~l~~L~~L~L 293 (1002)
+|.+.+.+++ .+..+++|+.|++++|+ +.+ ....+.++++|+.|++.++.+.+..... ....++|++|++
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l 283 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEE
Confidence 9998876654 56789999999999985 222 2345777888888888888776432111 112347888888
Q ss_pred cccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCC-CCCC---CCCCCceEEccCccc
Q 001867 294 SMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLP-GDLG---KNSPLRWVDLSNNQF 369 (1002)
Q Consensus 294 s~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~---~l~~L~~L~Ls~N~l 369 (1002)
++|+++|.+|..+.... ...++.|+.+++..|.+ .+| ..+. ...+|+.|++++|.+
T Consensus 284 ~~n~l~~~ip~~~~~~~------------------~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~ 343 (562)
T 3a79_B 284 YNLTITERIDREEFTYS------------------ETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPF 343 (562)
T ss_dssp EEEEECSCCCCCCCCCC------------------SCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCC
T ss_pred eccEeeccccchhhhcc------------------cccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCc
Confidence 88888777766552110 02333333344444433 122 1111 124577777777777
Q ss_pred cCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCC--CCcCCCCCcceEEEcccCcccCcccc
Q 001867 370 TGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKV--PPLLWGLPHVYLLELTDNFLSGEISK 447 (1002)
Q Consensus 370 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~i~~~~~~ 447 (1002)
.... ....+++|++|++++|.+++.+|..++++++|++|+|++|++++.. |..|..+++|+.|++++|++++
T Consensus 344 ~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~---- 417 (562)
T 3a79_B 344 IHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS---- 417 (562)
T ss_dssp CCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS----
T ss_pred cccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCC----
Confidence 5322 1246677888888888888778888888888888888888887532 2344555555555555554444
Q ss_pred ccccCCcccEEEccCCcCCCCCcc-ccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccc
Q 001867 448 NIAGAANLSLLIISKNNLSGSLPE-EIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKK 526 (1002)
Q Consensus 448 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 526 (1002)
.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|||++|+|+ .+|..+..+++
T Consensus 418 --------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~ 474 (562)
T 3a79_B 418 --------------------HAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQA 474 (562)
T ss_dssp --------------------CCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCC
T ss_pred --------------------ccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCC
Confidence 2222 244455555555555555544444433 56777777777777 55665557777
Q ss_pred cccccccCcccccCCCCC-ccccccccEEeCcceeeecccC
Q 001867 527 LNELNLADNLFYGNIPED-IGNLSVLNYLDLSNNRLSGRIP 566 (1002)
Q Consensus 527 L~~L~Ls~N~l~~~ip~~-~~~l~~L~~L~Ls~N~l~~~ip 566 (1002)
|+.|+|++|+++ .+|.. +..+++|++|+|++|++++..|
T Consensus 475 L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 475 LQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 777777777777 56665 7788888888888888887655
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-45 Score=414.07 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=202.8
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++.+. .......+++.+|+++|++++|||||+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~---------------~~~~~~~~~~~~Ei~il~~l~HpnIv~ 117 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA---------------FDVVTNAKRTLRELKILKHFKHDNIIA 117 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTT---------------TSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcc---------------ccchHHHHHHHHHHHHHHhcCCCCcce
Confidence 45788999999999999999996 46999999998432 123344567889999999999999999
Q ss_pred eeeEEec------CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 761 LWCCCTT------RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 761 l~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
+++++.. .+.+|+||||++ |+|.+++. +.+.+++..+..+++||+.||+|||++ +||||||||+|||+
T Consensus 118 l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~ 191 (398)
T 4b99_A 118 IKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLV 191 (398)
T ss_dssp EEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEE
T ss_pred EeeeeecccccccCCEEEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCcccccc
Confidence 9999864 367899999995 78999997 456799999999999999999999999 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCC--CcccccccccccccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCchh
Q 001867 835 DGDFGARVADFGVAKVVDASGK--PKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD 911 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~ 911 (1002)
+.++.+||+|||+|+.+..... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+....+.
T Consensus 192 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~ 271 (398)
T 4b99_A 192 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ 271 (398)
T ss_dssp CTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH
T ss_pred CCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH
Confidence 9999999999999987654322 2223456899999999998775 568999999999999999999999976544333
Q ss_pred HHHHHHHHhhccCccc--------------ccccccc----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 912 LVKWVCSTLDQKGVDH--------------VLDPKLD----CCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 912 ~~~~~~~~~~~~~~~~--------------~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+......... ..... .+.+... ...+....++.+++.+|+..||++|||++|+++
T Consensus 272 l~~I~~~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 272 LQLIMMVLGT-PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHHHHHHCC-CCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHhcCC-CChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 3333222111 00000 0000000 000011134778999999999999999999886
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.1e-44 Score=398.38 Aligned_cols=204 Identities=25% Similarity=0.380 Sum_probs=172.8
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc----CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CC
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS----NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RH 755 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 755 (1002)
+.+.|++.++||+|+||+||+|+.+ .++.||+|++.+. ....++.+|+++++.+ +|
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-------------------~~~~~~~~E~~~l~~~~~h 79 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-------------------SHPIRIAAELQCLTVAGGQ 79 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-------------------SCHHHHHHHHHHHHHTCSB
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-------------------cCHHHHHHHHHHHHHhcCC
Confidence 3567999999999999999999863 4678999988432 1235678999999998 69
Q ss_pred CceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 756 KNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 756 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
||||+++++|.+++..|+||||+++|+|.++++ .+++.+++.++.|++.||+|||++ +||||||||+|||++
T Consensus 80 ~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~ 151 (361)
T 4f9c_A 80 DNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYN 151 (361)
T ss_dssp TTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred CCCceEEEEEEECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEe
Confidence 999999999999999999999999999999984 389999999999999999999999 999999999999998
Q ss_pred CC-CCeEEccccCcccccCCCCC--------------------------cccccccccccccCccccccC-CCCCccchh
Q 001867 836 GD-FGARVADFGVAKVVDASGKP--------------------------KSMSVIAGSCGYIAPEYAYTL-RVNEKSDIY 887 (1002)
Q Consensus 836 ~~-~~~kl~DfGl~~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvw 887 (1002)
.+ +.+||+|||+|+........ ......+||+.|||||++.+. .++.++|||
T Consensus 152 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiW 231 (361)
T 4f9c_A 152 RRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMW 231 (361)
T ss_dssp TTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHH
T ss_pred CCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchh
Confidence 76 79999999999865433210 112345799999999998775 589999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCchh
Q 001867 888 SFGVVILELVTGRLPVDPEFGEKD 911 (1002)
Q Consensus 888 slGvil~ell~g~~p~~~~~~~~~ 911 (1002)
|+||++|||++|+.||....++.+
T Consensus 232 SlG~il~ell~G~~Pf~~~~~~~~ 255 (361)
T 4f9c_A 232 SAGVIFLSLLSGRYPFYKASDDLT 255 (361)
T ss_dssp HHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred hhHHHHHHHHHCCCCCCCCCCHHH
Confidence 999999999999999976655433
No 42
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.8e-43 Score=410.18 Aligned_cols=407 Identities=24% Similarity=0.266 Sum_probs=169.5
Q ss_pred CCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCccccccccccee
Q 001867 91 RLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVI 170 (1002)
Q Consensus 91 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 170 (1002)
..++|++|++++|.+ +.+|.+|+++++|++|++++|.++|.+|..++.+++|+.+++++|.. .+|++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 346677777777777 56677777777777777777777777777777777776666666543 356777
Q ss_pred eeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccccchhcccCccc
Q 001867 171 SLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNL 250 (1002)
Q Consensus 171 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 250 (1002)
++++|.+++. |.. .++|++|++++|.+. .+|.. +++|++|++++|++++ +|.. .++|++|++++|++
T Consensus 77 ~l~~~~l~~l-p~~---~~~L~~L~l~~n~l~--~lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 77 ELNNLGLSSL-PEL---PPHLESLVASCNSLT--ELPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQL 143 (454)
T ss_dssp ECTTSCCSCC-CSC---CTTCSEEECCSSCCS--SCCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCC
T ss_pred EecCCccccC-CCC---cCCCCEEEccCCcCC--ccccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCC
Confidence 7777777643 321 256666666666652 24432 2456666666666653 2211 13555555555555
Q ss_pred ccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccC
Q 001867 251 VGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIA 330 (1002)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~ 330 (1002)
++ +| .|.++++|++|++++|++++ +|..+ ++|++|++++|++++ +| .+.
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~------------------------~~~ 192 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP------------------------ELQ 192 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC------------------------CCT
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc------------------------ccc
Confidence 54 33 35555555555555555553 33222 245555555555553 33 244
Q ss_pred CCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEE
Q 001867 331 DSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRV 410 (1002)
Q Consensus 331 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 410 (1002)
++++|++|++++|++++ +|... .+|++|++++|+++ .+| .+..+++|++|++++|++++ +|.. +++|++|
T Consensus 193 ~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L 262 (454)
T 1jl5_A 193 NLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEAL 262 (454)
T ss_dssp TCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEE
T ss_pred CCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEE
Confidence 44444444444444443 22211 24444444444444 333 24444444444444444443 2221 2445555
Q ss_pred EccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccc-ccccccccccccc
Q 001867 411 RLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFL-KSLVVLSGSENKF 489 (1002)
Q Consensus 411 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l 489 (1002)
++++|++++ +|.. +++|+.|++++|++++... -.++|+.|++++|++++ ++ .+ ++|+.|++++|++
T Consensus 263 ~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l 329 (454)
T 1jl5_A 263 NVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKL 329 (454)
T ss_dssp ECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCC
T ss_pred ECCCCcccc-cCcc---cCcCCEEECcCCccCcccC----cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcc
Confidence 555555543 2222 2445555555555443210 01345555555555542 11 11 3455555555555
Q ss_pred CCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCccccc--CCCCCcccc-------------ccccEE
Q 001867 490 TGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYG--NIPEDIGNL-------------SVLNYL 554 (1002)
Q Consensus 490 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~ip~~~~~l-------------~~L~~L 554 (1002)
++ +|.. +++|+.|++++|++++ +|. .+++|++|+|++|++++ .+|.+++++ ++|++|
T Consensus 330 ~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L 401 (454)
T 1jl5_A 330 IE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQL 401 (454)
T ss_dssp SC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC---------------
T ss_pred cc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEE
Confidence 53 3332 2445555555555552 333 24455555555555554 444444433 556666
Q ss_pred eCcceeeec--ccCCcccccccceEEeccccCcCCCC
Q 001867 555 DLSNNRLSG--RIPVGLQNLKLNQLNVSNNRLSGELP 589 (1002)
Q Consensus 555 ~Ls~N~l~~--~ip~~~~~l~L~~l~ls~N~l~g~~p 589 (1002)
||++|+++| .+|..+ +.|++.+|.+.+.+|
T Consensus 402 ~ls~N~l~~~~~iP~sl-----~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 402 HVETNPLREFPDIPESV-----EDLRMNSERVVDPYE 433 (454)
T ss_dssp -------------------------------------
T ss_pred ECCCCcCCccccchhhH-----hheeCcCcccCCccc
Confidence 666666655 444432 233445555555444
No 43
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.2e-43 Score=415.69 Aligned_cols=255 Identities=22% Similarity=0.237 Sum_probs=200.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
+++|++.++||+|+||+||+|+.+ +|+.||||++.+..... ............++.+++.++|||||+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~-----------~~~~~~~~~E~~~l~ll~~~~HP~IV~ 256 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-----------KQGETLALNERIMLSLVSTGDCPFIVC 256 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-----------TTCHHHHHHHHHHHHHHSSSCCTTBCC
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch-----------hhhHHHHHHHHHHHHHHhhCCCCCEeE
Confidence 467888999999999999999964 68999999996532110 001111222344567778889999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
++++|.+.+.+|+||||++||+|.+++.. .+.+++..++.|+.||+.||+|||++ +||||||||+|||++.+|.+
T Consensus 257 l~~~f~~~~~lylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~v 331 (689)
T 3v5w_A 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHV 331 (689)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEEEECCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCE
Confidence 99999999999999999999999999985 35699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||+|+...... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||....... ........
T Consensus 332 KL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-~~~i~~~i 406 (689)
T 3v5w_A 332 RISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMT 406 (689)
T ss_dssp EECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-HHHHHHHH
T ss_pred EecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhh
Confidence 999999998775432 234589999999999864 579999999999999999999999997543222 22222211
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPA-----MRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~ 967 (1002)
... .+. ......+ ++.+++.+|++.||++|++ ++||.+
T Consensus 407 ~~~-~~~-----~p~~~S~----~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 407 LTM-AVE-----LPDSFSP----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHC-CCC-----CCTTSCH----HHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred cCC-CCC-----CCccCCH----HHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 111 110 0111222 4778999999999999998 677764
No 44
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.2e-43 Score=416.24 Aligned_cols=253 Identities=23% Similarity=0.344 Sum_probs=208.9
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|+.+ +|+.||+|++... .....+.+.+|+.+|++++|||||
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-----------------~~~~~~~~~~Ei~il~~l~hpnIv 217 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP-----------------HESDKETVRKEIQTMSVLRHPTLV 217 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------------SHHHHHHHHHHHHHHHHTCCTTBC
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc-----------------chhhHHHHHHHHHHHHhCCCCCCC
Confidence 4678999999999999999999964 6899999998432 233456789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC--
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD-- 837 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~-- 837 (1002)
+++++|.+++..|+||||++||+|.+++.. +...+++.++..++.||+.||+|||++ +|+||||||+|||++.+
T Consensus 218 ~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~ 293 (573)
T 3uto_A 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRS 293 (573)
T ss_dssp CEEEEEECSSEEEEEEECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSC
T ss_pred eEEEEEEECCEEEEEEeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCC
Confidence 999999999999999999999999999864 345699999999999999999999999 99999999999999854
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+.+||+|||+|+.+.... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||........+ ..+.
T Consensus 294 ~~vKl~DFG~a~~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~-~~i~ 369 (573)
T 3uto_A 294 NELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVK 369 (573)
T ss_dssp CCEEECCCSSCEECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHH
T ss_pred CCEEEeeccceeEccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-HHHH
Confidence 889999999999876542 234568999999999999999999999999999999999999999765332222 2221
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. .. ...++......+ .+.+++.+||+.||++|||++|+++
T Consensus 370 ~~----~~-~~~~~~~~~~s~----~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 370 SC----DW-NMDDSAFSGISE----DGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TT----CC-CCCSGGGTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hC----CC-CCCcccccCCCH----HHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 00 011111122233 3678999999999999999999986
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.4e-42 Score=402.63 Aligned_cols=424 Identities=24% Similarity=0.267 Sum_probs=274.9
Q ss_pred CeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCcccccc
Q 001867 69 HSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDL 148 (1002)
Q Consensus 69 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~L 148 (1002)
.+++.++++++++ |.+|..++++++|++|++++|.+.+.+|..++.+.+|+.+++++|.. .+|++|++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~l 78 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELEL 78 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEEC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEEe
Confidence 5688999999999 79999999999999999999999999999999999999999988764 56899999
Q ss_pred ccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCccccc
Q 001867 149 TGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVG 228 (1002)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 228 (1002)
++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++. .+|.. .++|++|++++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~--~l~~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK--ALSDL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS--CCCSC---CTTCCEEECCSSCCSS
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC--cccCC---CCCCCEEECcCCCCCC
Confidence 9999985 4542 3689999999999997 5653 478999999999873 34332 1689999999999996
Q ss_pred ccccccccccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCC
Q 001867 229 EIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTR 308 (1002)
Q Consensus 229 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 308 (1002)
+| .|+.+++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+.++++|+.|++++|++++ +|...
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-- 214 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-- 214 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--
T ss_pred -Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--
Confidence 67 69999999999999999996 55543 589999999999997 55 69999999999999999996 44433
Q ss_pred CCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceee
Q 001867 309 LPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLM 388 (1002)
Q Consensus 309 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 388 (1002)
..|+.|++++|+++ .+| .+..+++|++|++++|++++ +|.. .++|+.|++++|++++ +|.. .++|++|++
T Consensus 215 ~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l 284 (454)
T 1jl5_A 215 LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDV 284 (454)
T ss_dssp TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEEC
Confidence 25899999999998 566 48889999999999999986 4432 3788999999999885 4543 367888888
Q ss_pred eccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCC-CcceEEEcccCcccCccccccccCCcccEEEccCCcCCC
Q 001867 389 IYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGL-PHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSG 467 (1002)
Q Consensus 389 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 467 (1002)
++|.+++. |.. .++|++|++++|++++ ++ .+ ++|+.|++++|++++ +|.. +++|+.|++++|+++
T Consensus 285 s~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~- 350 (454)
T 1jl5_A 285 SENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA- 350 (454)
T ss_dssp CSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-
T ss_pred cCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-
Confidence 88888762 211 2578888888888875 22 23 478888888888876 3332 467888888888887
Q ss_pred CCccccccccccccccccccccCC--CCcccccccccCCeeecCCCcCCcccccccccccccccccccCccccc--CCCC
Q 001867 468 SLPEEIGFLKSLVVLSGSENKFTG--SLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYG--NIPE 543 (1002)
Q Consensus 468 ~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~ip~ 543 (1002)
.+|. .+++|+.|++++|++++ .+|..++.+ +.|.+.|.+|.. +++|+.|++++|.+++ .+|.
T Consensus 351 ~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 351 EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC---------------------------------
T ss_pred cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 4565 46778888888888876 566655432 346666677663 4789999999999997 6775
Q ss_pred CccccccccEEeCcceeeecccCCccccc
Q 001867 544 DIGNLSVLNYLDLSNNRLSGRIPVGLQNL 572 (1002)
Q Consensus 544 ~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l 572 (1002)
+ |+.|.+.+|.+.+.+|......
T Consensus 417 s------l~~L~~~~~~~~~~~~~~~~~~ 439 (454)
T 1jl5_A 417 S------VEDLRMNSERVVDPYEFAHETT 439 (454)
T ss_dssp -----------------------------
T ss_pred h------HhheeCcCcccCCccccCHHHh
Confidence 4 5667789999998888765543
No 46
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.5e-42 Score=380.09 Aligned_cols=273 Identities=35% Similarity=0.580 Sum_probs=230.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|++.+.||+|+||.||+|..++++.||||++... .....+.+.+|+.++++++||||+++
T Consensus 38 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-----------------~~~~~~~~~~E~~~l~~l~h~~iv~~ 100 (321)
T 2qkw_B 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-----------------SSQGIEEFETEIETLSFCRHPHLVSL 100 (321)
T ss_dssp CCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC-----------------CSSHHHHHHHHHHGGGSCCCTTBCCE
T ss_pred HhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc-----------------ChHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 5789999999999999999999888999999987432 22345679999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG--GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++.+.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 101 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp EEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred EEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 9999999999999999999999999975432 3599999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc--hhHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE--KDLVKWVC 917 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~--~~~~~~~~ 917 (1002)
+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....|..
T Consensus 178 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 9999999998765443333334556899999999999889999999999999999999999999754332 33445544
Q ss_pred HHhhccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 918 STLDQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
...........+++.. .....+....+.+++.+||+.||++|||++|+++.|+.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp HHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 4444455555666555 34556777889999999999999999999999999998864
No 47
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.3e-41 Score=379.09 Aligned_cols=283 Identities=40% Similarity=0.693 Sum_probs=234.4
Q ss_pred cCCcHHHH-hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhc
Q 001867 674 LGFSEYEI-LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGK 752 (1002)
Q Consensus 674 ~~~~~~~~-~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 752 (1002)
+.+.+... .++|++.+.||+|+||.||+|...+++.||||++..... ......+.+|+.++++
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----------------~~~~~~~~~e~~~l~~ 83 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT----------------QGGELQFQTEVEMISM 83 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------------------CCCHHHHHHHGGGT
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC----------------chHHHHHHHHHHHHHh
Confidence 33444443 578999999999999999999988899999999854211 1122358999999999
Q ss_pred CCCCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCC
Q 001867 753 IRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG--GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSN 830 (1002)
Q Consensus 753 l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~ 830 (1002)
++||||+++++++...+..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+++.++|+||||||+
T Consensus 84 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~ 163 (326)
T 3uim_A 84 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA 163 (326)
T ss_dssp CCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGG
T ss_pred ccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchh
Confidence 9999999999999999999999999999999999986432 45999999999999999999999986668999999999
Q ss_pred cEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCC----CC
Q 001867 831 NILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD----PE 906 (1002)
Q Consensus 831 NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~----~~ 906 (1002)
||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||. ..
T Consensus 164 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 242 (326)
T 3uim_A 164 NILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242 (326)
T ss_dssp GEEECTTCCEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTT
T ss_pred hEEECCCCCEEeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccc
Confidence 99999999999999999987754432 22334569999999999998889999999999999999999999996 23
Q ss_pred CCchhHHHHHHHHhhccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Q 001867 907 FGEKDLVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVG 973 (1002)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 973 (1002)
........|+.............+... .....+....+.+++.+||+.||++|||++||++.|+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred ccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 334456666666666666666666555 3455677788999999999999999999999999998753
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.7e-42 Score=401.57 Aligned_cols=392 Identities=21% Similarity=0.249 Sum_probs=235.0
Q ss_pred cccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCcc-ccccccccccccccccC
Q 001867 120 QHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTI-PAFLGNISTLKMLNLSY 198 (1002)
Q Consensus 120 ~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~ 198 (1002)
+.++.++++++ .+|. +. ++|++|+|++|++++..|..|+++++|++|+|++|.+.+.+ +..|+++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 34666667766 3444 22 56777777777777666667777777777777777665333 44556666666666666
Q ss_pred CCCCCCCCCcccCCCCccchhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeeeccCCcccCCC
Q 001867 199 NPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDL 278 (1002)
Q Consensus 199 N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 278 (1002)
|++ .+..|..|+++++|++|+|++|++++..|.. ..|..+++|++|+|++|++.+..
T Consensus 89 n~l-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----------------------~~~~~l~~L~~L~L~~n~l~~~~ 145 (455)
T 3v47_A 89 NQF-LQLETGAFNGLANLEVLTLTQCNLDGAVLSG----------------------NFFKPLTSLEMLVLRDNNIKKIQ 145 (455)
T ss_dssp CTT-CEECTTTTTTCTTCCEEECTTSCCBTHHHHS----------------------STTTTCTTCCEEECCSSBCCSCC
T ss_pred Ccc-CccChhhccCcccCCEEeCCCCCCCccccCc----------------------ccccCcccCCEEECCCCccCccC
Confidence 654 2233444555555555555555554433222 12444455555555555555444
Q ss_pred CCc-cccccccceeeccccccCCCCCccCCCC---CcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCC
Q 001867 279 PTG-WSNLTSLRLLDASMNDLTGPIPDDLTRL---PLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLG 354 (1002)
Q Consensus 279 ~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~---~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 354 (1002)
|.. +.++++|++|++++|++++..|..+..+ .++.|++++|.+.+..+..+.. .....+.
T Consensus 146 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~ 209 (455)
T 3v47_A 146 PASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPF 209 (455)
T ss_dssp CCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTT
T ss_pred cccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc----------------ccccccc
Confidence 443 4555555555555555555544444332 2444555555444332221110 0011233
Q ss_pred CCCCCceEEccCccccCCCChhhhcc---CcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcc
Q 001867 355 KNSPLRWVDLSNNQFTGEIPASLCEK---GELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHV 431 (1002)
Q Consensus 355 ~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 431 (1002)
.+++|++|++++|++++..|..+... .+|+.|++++|.+.+.. +..+.+.+..+..+..+
T Consensus 210 ~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~--- 272 (455)
T 3v47_A 210 KNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGL--- 272 (455)
T ss_dssp TTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGG---
T ss_pred ccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------cchhhhccCcccccccc---
Confidence 45678888888888887777766554 44555555544433211 11112221111111111
Q ss_pred eEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCC
Q 001867 432 YLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHAN 511 (1002)
Q Consensus 432 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 511 (1002)
..++|+.|++++|++++..|..++.+++|+.|++++|++++..|..|..+++|++|+|++|
T Consensus 273 -------------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 333 (455)
T 3v47_A 273 -------------------EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN 333 (455)
T ss_dssp -------------------TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred -------------------cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCC
Confidence 1256777777777777667777777777777777777777666777777788888888888
Q ss_pred cCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCCh
Q 001867 512 DLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPS 590 (1002)
Q Consensus 512 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~ 590 (1002)
.+++..|..|+.+++|++|+|++|++++..|..++++++|++|+|++|++++..+..++.+ +|+.|+|++|++++.+|.
T Consensus 334 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 334 FLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 8877777777888888888888888877777778888888888888888886555566666 688888888888888774
No 49
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.4e-41 Score=397.67 Aligned_cols=364 Identities=20% Similarity=0.189 Sum_probs=288.2
Q ss_pred CCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCC-CccccccCCccccccccccccCCCCcccccccccceee
Q 001867 93 ENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTL-TPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVIS 171 (1002)
Q Consensus 93 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 171 (1002)
++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 68888999998888888888888899999999988887554 55788888999999999988888888888889999999
Q ss_pred eccccccCccccc--cccccccccccccCCCCCCCCCCcc-cCCCCccchhhccCcccccccccccccc--cccchhccc
Q 001867 172 LVYNLLDGTIPAF--LGNISTLKMLNLSYNPFLPGRIPPE-LGNLTNLEILWLTECNLVGEIPDSLGRL--AKLVDLDLA 246 (1002)
Q Consensus 172 L~~N~l~~~~p~~--l~~l~~L~~L~Ls~N~~~~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~ 246 (1002)
|++|++++..|.. ++++++|++|+|++|++ .+..|.. +.++++|++|++++|++++..|..+..+ .+|+.|+++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l-~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI-KKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBC-CSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCcc-CccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccc
Confidence 9999888755544 88888899999998886 3444554 7888899999999999988888888776 688999999
Q ss_pred CcccccccCccc--------ccccceeeeeccCCcccCCCCCccccc---cccceeeccccccCCCCCccCCCCCcceee
Q 001867 247 LNNLVGAIPSSL--------TELASVVQIELYNNSLTGDLPTGWSNL---TSLRLLDASMNDLTGPIPDDLTRLPLESLN 315 (1002)
Q Consensus 247 ~N~l~~~~~~~l--------~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ 315 (1002)
+|.+.+..+..+ ..+++|+.|++++|++.+..|..+... ++|+.|++++|.+.+...
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------------ 256 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------------ 256 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT------------
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc------------
Confidence 998887655443 356789999999999988888777655 889999999988764321
Q ss_pred cCCCcccCcCCcccCC--CcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeecccc
Q 001867 316 LYENRLEGSLPATIAD--SPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSF 393 (1002)
Q Consensus 316 L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 393 (1002)
..+.+....+..+.. .++|++|++++|++.+..|..+..+++|++|+|++|++++..|..|..+++|++|++++|.+
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 257 -GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp -TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred -chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 112222222222222 35677788888888777777788888888888888888877777788888888888888888
Q ss_pred ccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCc
Q 001867 394 TGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLP 470 (1002)
Q Consensus 394 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 470 (1002)
++..|..++++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 87777888888888888888888888778888888888888888888888777777888888889999998887766
No 50
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.4e-41 Score=379.27 Aligned_cols=261 Identities=25% Similarity=0.372 Sum_probs=214.4
Q ss_pred cCCCcCCeeeecCCccEEEEEEc--------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS--------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI- 753 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 753 (1002)
++|++.+.||+|+||.||+|+.. ++..||||++... ......+.+.+|+.+++++
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~~~E~~~l~~l~ 144 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD----------------ATEKDLSDLVSEMEMMKMIG 144 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT----------------CBHHHHHHHHHHHHHHHHSC
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC----------------cCHHHHHHHHHHHHHHHHhc
Confidence 56788899999999999999863 3567999998432 1234567799999999999
Q ss_pred CCCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 001867 754 RHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK--------------GGLLDWPTRYKIIVDAAEGLSYLHHDCV 819 (1002)
Q Consensus 754 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 819 (1002)
+||||+++++++.+.+..|+||||+++|+|.+++.... ...+++..++.++.||+.||+|||++
T Consensus 145 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-- 222 (370)
T 2psq_A 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-- 222 (370)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 89999999999999999999999999999999998643 24589999999999999999999999
Q ss_pred CCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-
Q 001867 820 PSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT- 898 (1002)
Q Consensus 820 ~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~- 898 (1002)
+|+||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++
T Consensus 223 -~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~ 301 (370)
T 2psq_A 223 -KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 301 (370)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred -CeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999987765544344445567889999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 899 GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 899 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
|+.||.... ..+....+...... +....+. ..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 302 g~~p~~~~~-~~~~~~~~~~~~~~--------~~~~~~~----~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 302 GGSPYPGIP-VEELFKLLKEGHRM--------DKPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp SCCSSTTCC-GGGHHHHHHTTCCC--------CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCC-HHHHHHHHhcCCCC--------CCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 999987543 33333332221110 1111222 2478899999999999999999999999998653
No 51
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.2e-42 Score=376.96 Aligned_cols=291 Identities=30% Similarity=0.476 Sum_probs=236.4
Q ss_pred CchHHHHHHHHHHHhccCCccccCCCCCCCCCCCCCc--cceeEEeCCC--CeEEEEEcCCCCcCC--CCCccccCCCCC
Q 001867 22 SLNQEGLYLERVKLSLSDPDSALSSWGRNPRDDSPCS--WRGVECDPRS--HSVASIDLSNANIAG--PFPSLLCRLENL 95 (1002)
Q Consensus 22 ~~~~~~~~l~~~k~~~~d~~~~l~sw~~~~~~~~~C~--w~gv~C~~~~--~~v~~l~L~~~~l~~--~~~~~~~~l~~L 95 (1002)
+..+|++||++||+++.||. .+++|.. +.+||. |.||+|+..+ ++|+.|+|+++++++ .+|..|+++++|
T Consensus 3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~---~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPT-TLSSWLP---TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCT---TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccCCCC---CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 45689999999999999987 8999953 357898 9999998765 789999999999999 899999999999
Q ss_pred CEEeccC-CCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeecc
Q 001867 96 TFLTLFN-NSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVY 174 (1002)
Q Consensus 96 ~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 174 (1002)
++|+|++ |.+.+.+|..|+.+++|++|+|++|.+++.+|..|.++++|++|+|++|++++.+|..|..+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 999999999999999999999999999988999999999999999999999988999999999999999999
Q ss_pred ccccCcccccccccc-ccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccccchhcccCcccccc
Q 001867 175 NLLDGTIPAFLGNIS-TLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGA 253 (1002)
Q Consensus 175 N~l~~~~p~~l~~l~-~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 253 (1002)
|++++.+|..+++++ +|++|+|++|++ .+.+|..+..++ |++|++++|++++..|..|..+++|++|+|++|++++.
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l-~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRL-TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEE-EEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCee-eccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee
Confidence 999888888888887 888888888875 356677777776 77777777777777777777777777777777777765
Q ss_pred cCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCC-CcceeecCCCc
Q 001867 254 IPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRL-PLESLNLYENR 320 (1002)
Q Consensus 254 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~ 320 (1002)
+|. +..+++|++|++++|++++.+|..+..+++|+.|++++|++++.+|.. ..+ .|+.|++++|+
T Consensus 237 ~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 237 LGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 554 666677777777777777667777777777777777777776655554 222 25555555554
No 52
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.1e-41 Score=369.32 Aligned_cols=263 Identities=32% Similarity=0.406 Sum_probs=202.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|++.+.||+|+||.||+|+. +++.||||++... .......+.+.+|++++++++||||+++
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~hp~iv~~ 99 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQ---------------DFHAERVNEFLREVAIMKRLRHPNIVLF 99 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCC---------------CCSHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCC---------------CCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 35788889999999999999987 4889999998432 1133445678999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEECCCC
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG-GLLDWPTRYKIIVDAAEGLSYLHHDCVPS--IVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--iiHrDlk~~NIll~~~~ 838 (1002)
++++.+.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ + |+||||||+||+++.++
T Consensus 100 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~ 176 (309)
T 3p86_A 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKY 176 (309)
T ss_dssp EEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTC
T ss_pred EEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCC
Confidence 9999999999999999999999999975321 2489999999999999999999998 8 99999999999999999
Q ss_pred CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS 918 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~ 918 (1002)
.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+..
T Consensus 177 ~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~-~~~~~~~~~ 253 (309)
T 3p86_A 177 TVKVCDFGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP-AQVVAAVGF 253 (309)
T ss_dssp CEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH-HHHHHHHHH
T ss_pred cEEECCCCCCccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHh
Confidence 99999999998654332 122345799999999999999999999999999999999999999975432 222222111
Q ss_pred HhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhcc
Q 001867 919 TLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 977 (1002)
..... +......+ .+.+++.+||+.||++|||++++++.|+.+.....
T Consensus 254 ~~~~~-------~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 254 KCKRL-------EIPRNLNP----QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp SCCCC-------CCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred cCCCC-------CCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 11110 01112222 47889999999999999999999999999876443
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-40 Score=364.76 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=206.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++++++||||++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------------~~~~~~~~~~E~~~l~~l~hp~iv~ 81 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-----------------QQPKKELIINEILVMRENKNPNIVN 81 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGG-----------------GCSCHHHHHHHHHHHHHCCCTTBCC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecc-----------------cccHHHHHHHHHHHHhcCCCCCCCe
Confidence 46799999999999999999995 56899999998432 1223566899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++...+..|+||||+++|+|.+++.. ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~ 155 (297)
T 3fxz_A 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSV 155 (297)
T ss_dssp EEEEEEETTEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCE
T ss_pred EeEEEEECCEEEEEEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCE
Confidence 99999999999999999999999999975 3589999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||++........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||.................
T Consensus 156 kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 233 (297)
T 3fxz_A 156 KLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233 (297)
T ss_dssp EECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS
T ss_pred EEeeCCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence 9999999987655432 23345799999999999999999999999999999999999999976533322222211111
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. . +...... ..+.+++.+||+.||++|||++|+++
T Consensus 234 ----~~-~--~~~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 234 ----PE-L--QNPEKLS----AIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ----CC-C--SCGGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----CC-C--CCccccC----HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 0 0011122 24778999999999999999999985
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=368.91 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=210.2
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|.+.+.||+|+||.||+|... +++.||+|++... +....+.+.+|++++++++||||+++
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~-----------------~~~~~~~~~~E~~~l~~l~hp~iv~~ 72 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF-----------------DEETQRTFLKEVKVMRCLEHPNVLKF 72 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC-----------------CHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC-----------------CHHHHHHHHHHHHHHHhCCCcCcccE
Confidence 56778899999999999999974 5899999987331 34556789999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+++..++||||+++|+|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~k 148 (310)
T 3s95_A 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVV 148 (310)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEE
T ss_pred EEEEecCCeeEEEEEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEE
Confidence 99999999999999999999999999863 45699999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcc------------cccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 842 VADFGVAKVVDASGKPKS------------MSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
|+|||+++.......... .....||+.|+|||++.+..++.++||||||+++|||++|..|+......
T Consensus 149 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~ 228 (310)
T 3s95_A 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPR 228 (310)
T ss_dssp ECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCB
T ss_pred EeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhh
Confidence 999999987654332111 11457999999999999999999999999999999999999998653222
Q ss_pred hh-----HHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 910 KD-----LVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 910 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
.. ........ .. ...+ ..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 229 ~~~~~~~~~~~~~~~---------~~---~~~~----~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 229 TMDFGLNVRGFLDRY---------CP---PNCP----PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp CTTSSBCHHHHHHHT---------CC---TTCC----TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhcccccc---------CC---CCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 11 11111000 00 1111 23778999999999999999999999999987644
No 55
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.6e-40 Score=364.63 Aligned_cols=265 Identities=28% Similarity=0.374 Sum_probs=207.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|.+.+.||+|+||.||+|+.. ..+|+|+++.. .......+.+.+|+.++++++||||+++
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~---------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 97 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVV---------------DPTPEQFQAFRNEVAVLRKTRHVNILLF 97 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCS---------------SCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecC---------------CCCHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 367889999999999999999864 46899987432 1234456789999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++. .+..++||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 98 ~~~~~-~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 172 (307)
T 3lb7_A 98 MGYMT-KDNLAIVTQWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVK 172 (307)
T ss_dssp EEEEC-SSSCEEEEECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEE
T ss_pred EEEEc-cCcEEEEEecCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEE
Confidence 99875 4558999999999999999975 346799999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY---TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS 918 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~ 918 (1002)
|+|||+++...............||+.|+|||++. +..++.++|||||||++|||++|+.||............+..
T Consensus 173 l~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~ 252 (307)
T 3lb7_A 173 IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR 252 (307)
T ss_dssp ECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH
T ss_pred EccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc
Confidence 99999998665433333344567999999999886 566889999999999999999999999765544444333322
Q ss_pred HhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 919 TLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
...... +......++ ..+.+++.+||+.||++||+++|+++.++.+....
T Consensus 253 ~~~~~~----~~~~~~~~~----~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 253 GYASPD----LSKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TCCCCC----STTSCSSSC----HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCCCcc----hhhhhcCCc----HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 221111 111112233 34888999999999999999999999999886543
No 56
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.9e-40 Score=361.91 Aligned_cols=269 Identities=36% Similarity=0.550 Sum_probs=220.6
Q ss_pred CCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeeeeEEec
Q 001867 688 DNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLWCCCTT 767 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 767 (1002)
.+.||+|+||.||+|.. +++.||||++.... ........+.+.+|+.++++++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------------~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 101 (307)
T 2nru_A 36 GNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMV-------------DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD 101 (307)
T ss_dssp CCEEEECSSEEEEEEES-SSCEEEEEEECCCT-------------TSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CCccccCCCeEEEEEEE-CCceEEEEEEeccc-------------CcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec
Confidence 38999999999999987 57899999985421 11233456779999999999999999999999999
Q ss_pred CCeeeEEEeccCCCChhhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEcccc
Q 001867 768 RDCKLLVYEYMPNGSLGDLLHSCK-GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFG 846 (1002)
Q Consensus 768 ~~~~~lv~e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfG 846 (1002)
.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg 178 (307)
T 2nru_A 102 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG 178 (307)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeecc
Confidence 999999999999999999987533 35699999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh-hccCc
Q 001867 847 VAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL-DQKGV 925 (1002)
Q Consensus 847 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~-~~~~~ 925 (1002)
+++...............||+.|+|||++.+ .++.++||||||+++|+|++|+.||...........+..... .....
T Consensus 179 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 257 (307)
T 2nru_A 179 LARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTI 257 (307)
T ss_dssp TCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCH
T ss_pred cccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhh
Confidence 9987665443333445579999999998765 478999999999999999999999976544333333322221 12233
Q ss_pred cccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 926 DHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
...+++............+.+++.+||+.||++|||++++++.|+++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 258 EDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 4455566666677777889999999999999999999999999999853
No 57
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.2e-41 Score=381.40 Aligned_cols=260 Identities=25% Similarity=0.353 Sum_probs=210.5
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||.||+|.+. +++.||||++.... .....+.+.+|+.++++++||||+++
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~hpniv~~ 177 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL----------------PPDLKAKFLQEARILKQYSHPNIVRL 177 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS----------------CHHHHTTTTHHHHHHTTCCCTTBCCE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC----------------CHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 56778899999999999999985 68999999884321 23345678999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++..++..|+||||+++|+|.++++.. +..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 178 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~k 253 (377)
T 3cbl_A 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLK 253 (377)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEEecCCCcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEE
Confidence 99999999999999999999999999753 34689999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.... ..+....+....
T Consensus 254 l~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~ 332 (377)
T 3cbl_A 254 ISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-NQQTREFVEKGG 332 (377)
T ss_dssp ECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-HHHHHHHHHTTC
T ss_pred ECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCC
Confidence 999999986543322111122345778999999998899999999999999999998 899986542 223333222111
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
. .+....++. .+.+++.+||+.||++|||++++++.|+++...
T Consensus 333 ~--------~~~~~~~~~----~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 333 R--------LPCPELCPD----AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp C--------CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C--------CCCCCCCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1 011122222 478899999999999999999999999998653
No 58
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-40 Score=369.74 Aligned_cols=269 Identities=26% Similarity=0.299 Sum_probs=210.5
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|++.++||+|+||.||+|+.. ++.||||++.. .......+..|+.++++++||||+++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~------------------~~~~~~~~~~E~~~l~~l~hpniv~~ 83 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPI------------------QDKQSWQNEYEVYSLPGMKHENILQF 83 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECG------------------GGHHHHHHHHHHHTSTTCCCTTBCCE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeec------------------CchHHHHHHHHHHHHhcCCCCCchhh
Confidence 467888999999999999999876 79999999843 12334556779999999999999999
Q ss_pred eeEEecCC----eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc-------CCCCeeeCCCCCC
Q 001867 762 WCCCTTRD----CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHD-------CVPSIVHRDVKSN 830 (1002)
Q Consensus 762 ~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~~~iiHrDlk~~ 830 (1002)
++++.... ..++||||+++|+|.++++. ..+++..++.++.|++.||+|||+. +.++|+||||||+
T Consensus 84 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~ 160 (322)
T 3soc_A 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK 160 (322)
T ss_dssp EEEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGG
T ss_pred cceeccCCCCCceEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChH
Confidence 99998754 36999999999999999975 3499999999999999999999985 1238999999999
Q ss_pred cEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccC-----CCCCccchhhHHHHHHHHHhCCCCCCC
Q 001867 831 NILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-----RVNEKSDIYSFGVVILELVTGRLPVDP 905 (1002)
Q Consensus 831 NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslGvil~ell~g~~p~~~ 905 (1002)
||+++.++.+||+|||+++...............||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 161 Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~ 240 (322)
T 3soc_A 161 NVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240 (322)
T ss_dssp GEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSS
T ss_pred hEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999887665444444456799999999998863 456789999999999999999999975
Q ss_pred CCCch------------hHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Q 001867 906 EFGEK------------DLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVG 973 (1002)
Q Consensus 906 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 973 (1002)
..... ....+.. ..........+.... ........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 241 PVDEYMLPFEEEIGQHPSLEDMQE-VVVHKKKRPVLRDYW--QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHH-HHTTSCCCCCCCGGG--GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcchhccchhhhhccCCchhhhhh-hhhcccCCCCccccc--cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 43321 1111111 111111111111111 11234456889999999999999999999999999987
Q ss_pred hh
Q 001867 974 AE 975 (1002)
Q Consensus 974 ~~ 975 (1002)
+.
T Consensus 318 ~~ 319 (322)
T 3soc_A 318 RL 319 (322)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 59
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.9e-40 Score=362.12 Aligned_cols=267 Identities=27% Similarity=0.368 Sum_probs=209.8
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+.+|+.++++++||||++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~hp~iv~ 75 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP--------------REKEETLKRFEREVHNSSQLSHQNIVS 75 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCS--------------SCCHHHHHHHHHHHHHHTTCCBTTBCC
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCc--------------cccHHHHHHHHHHHHHHhcCCCCCCce
Confidence 356888999999999999999964 68999999985431 123445678999999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++++|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 76 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~ 150 (294)
T 4eqm_A 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTL 150 (294)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred EEEeeeeCCeEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCE
Confidence 999999999999999999999999999853 4699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||+++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||............ .
T Consensus 151 kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~----~ 225 (294)
T 4eqm_A 151 KIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH----I 225 (294)
T ss_dssp EECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH----H
T ss_pred EEEeCCCccccccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----h
Confidence 9999999987654322 2233456999999999999999999999999999999999999999765332222111 1
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHHhhhhcc
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-AMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~evl~~L~~~~~~~~ 977 (1002)
.. .............+ ..+.+++.+|++.||++|| +++++.+.|+.+....+
T Consensus 226 ~~-~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 226 QD-SVPNVTTDVRKDIP----QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp SS-CCCCHHHHSCTTSC----HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred hc-cCCCcchhcccCCC----HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 11 11111011111222 3478899999999999998 99999999998765443
No 60
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.8e-40 Score=368.54 Aligned_cols=250 Identities=27% Similarity=0.381 Sum_probs=206.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|.. .+|+.||||++.+. .......+.+.+|+.++++++||||++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~hpnIv~ 78 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT---------------QLNPTSLQKLFREVRIMKILNHPNIVK 78 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGG---------------GSCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhh---------------cCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence 46788899999999999999997 57999999998542 113345667889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++...+..|+||||+++|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 79 l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~ 153 (328)
T 3fe3_A 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNI 153 (328)
T ss_dssp EEEEEECSSEEEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred EEEEEEECCEEEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCE
Confidence 999999999999999999999999999753 5699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCC-CccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVN-EKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++....... .....+||+.|+|||++.+..+. .++||||+||++|||++|+.||..... .+....+..
T Consensus 154 kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~- 228 (328)
T 3fe3_A 154 KIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-KELRERVLR- 228 (328)
T ss_dssp EECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH-
T ss_pred EEeeccCceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-HHHHHHHHh-
Confidence 999999998765432 23456799999999999888765 799999999999999999999975432 222221111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.... + | .... ..+.+++.+||+.||++|||++|+++.
T Consensus 229 ---~~~~--~-p--~~~s----~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 229 ---GKYR--I-P--FYMS----TDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ---CCCC--C-C--TTSC----HHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ---CCCC--C-C--CCCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1110 0 0 1112 247789999999999999999999863
No 61
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=375.40 Aligned_cols=266 Identities=25% Similarity=0.364 Sum_probs=216.9
Q ss_pred cCCCcCCeeeecCCccEEEEEEc--------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS--------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI- 753 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 753 (1002)
++|.+.+.||+|+||.||+|+.. ++..||||++... ......+++.+|+++++++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~~~E~~~l~~l~ 132 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD----------------ATEKDLSDLISEMEMMKMIG 132 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT----------------CCHHHHHHHHHHHHHHHHHC
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc----------------cCHHHHHHHHHHHHHHHHhc
Confidence 56778899999999999999862 2357999998432 1234457799999999999
Q ss_pred CCCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 001867 754 RHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK--------------GGLLDWPTRYKIIVDAAEGLSYLHHDCV 819 (1002)
Q Consensus 754 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 819 (1002)
+||||+++++++..++..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++
T Consensus 133 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 210 (382)
T 3tt0_A 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-- 210 (382)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC--
Confidence 89999999999999999999999999999999998643 24699999999999999999999999
Q ss_pred CCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-
Q 001867 820 PSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT- 898 (1002)
Q Consensus 820 ~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~- 898 (1002)
+|+||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++
T Consensus 211 -~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~ 289 (382)
T 3tt0_A 211 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289 (382)
T ss_dssp -TCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred -CEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999987765544444445568899999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccc
Q 001867 899 GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRS 978 (1002)
Q Consensus 899 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 978 (1002)
|+.||.... ..+....+...... +....... ++.+++.+||+.||++|||++|+++.|+++.+....
T Consensus 290 g~~p~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~----~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 290 GGSPYPGVP-VEELFKLLKEGHRM--------DKPSNCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp SCCSSTTCC-HHHHHHHHHTTCCC--------CCCSSCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred CCCCCCCCC-HHHHHHHHHcCCCC--------CCCccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 999986542 23333322221111 11122222 478899999999999999999999999999765543
Q ss_pred cC
Q 001867 979 KT 980 (1002)
Q Consensus 979 ~~ 980 (1002)
..
T Consensus 357 ~~ 358 (382)
T 3tt0_A 357 QE 358 (382)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 62
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=365.78 Aligned_cols=261 Identities=27% Similarity=0.407 Sum_probs=209.5
Q ss_pred cCCCcCCeeeecCCccEEEEEEc----CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS----NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|++.+.||+|+||.||+|.+. .+..||||++.... .....+.+.+|+.++++++||||
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~i 112 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY----------------TERQRRDFLSEASIMGQFDHPNI 112 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC----------------CHHHHHHHHHHHHHHTTCCCTTB
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC----------------CHHHHHHHHHHHHHHHhCCCCCC
Confidence 56788899999999999999974 34569999984321 23456779999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
+++++++.+.+..|+||||+++|+|.++++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 113 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (325)
T 3kul_A 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNL 188 (325)
T ss_dssp CCEEEEECGGGCCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred CcEEEEEEeCCccEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCC
Confidence 9999999999999999999999999999975 335699999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCCCc-ccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPK-SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~ 916 (1002)
.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+
T Consensus 189 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-~~~~~~~ 267 (325)
T 3kul_A 189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-RDVISSV 267 (325)
T ss_dssp CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH-HHHHHHH
T ss_pred CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH-HHHHHHH
Confidence 99999999998775543221 2233456788999999998899999999999999999999 9999965432 2222222
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
..... .+.....+ ..+.+++.+||+.||++|||++|+++.|+.+....
T Consensus 268 ~~~~~--------~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 268 EEGYR--------LPAPMGCP----HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HTTCC--------CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HcCCC--------CCCCCCcC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 21110 01112222 24788999999999999999999999999987543
No 63
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-40 Score=358.86 Aligned_cols=256 Identities=28% Similarity=0.466 Sum_probs=210.0
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|...+++.||+|++... ....+++.+|++++++++||||++++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~h~~i~~~~ 71 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG------------------AMSEEDFIEEAEVMMKLSHPKLVQLY 71 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT------------------SBCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc------------------ccCHHHHHHHHHHHHhCCCCCEeeEE
Confidence 567788999999999999999988999999998432 11245689999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++.+++..++||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl 147 (269)
T 4hcu_A 72 GVCLEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKV 147 (269)
T ss_dssp EEECSSSSEEEEEECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEE
T ss_pred EEEecCCceEEEEEeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEe
Confidence 999999999999999999999999975 345699999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
+|||+++....... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+....+.....
T Consensus 148 ~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-~~~~~~~~~~~~ 225 (269)
T 4hcu_A 148 SDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTGFR 225 (269)
T ss_dssp CCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTTCC
T ss_pred cccccccccccccc-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-HHHHHHHhcCcc
Confidence 99999986644321 11223456788999999999999999999999999999999 8999975432 222222211110
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
. ..+ .... ..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 226 -----~-~~~--~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 226 -----L-YKP--RLAS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -----C-CCC--TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----C-CCC--CcCC----HHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 0 001 1122 247889999999999999999999999999864
No 64
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=376.75 Aligned_cols=266 Identities=23% Similarity=0.328 Sum_probs=213.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEc------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK 756 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 756 (1002)
++|++.+.||+|+||.||+|++. +++.||||++... .......++.+|+.++++++||
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~~~E~~~l~~l~hp 134 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV----------------CSEQDELDFLMEALIISKFNHQ 134 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS----------------CCHHHHHHHHHHHHHHHHCCCT
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc----------------cChhhHHHHHHHHHHHHhCCCC
Confidence 46778899999999999999853 4678999998432 1234456789999999999999
Q ss_pred ceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 001867 757 NIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG-----GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNN 831 (1002)
Q Consensus 757 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~N 831 (1002)
||+++++++.+.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+|
T Consensus 135 nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 211 (367)
T 3l9p_A 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARN 211 (367)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred CCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhh
Confidence 999999999999999999999999999999986432 4599999999999999999999999 99999999999
Q ss_pred EEECCCC---CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCC
Q 001867 832 ILLDGDF---GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEF 907 (1002)
Q Consensus 832 Ill~~~~---~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~ 907 (1002)
|+++.++ .+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 212 Ill~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~ 291 (367)
T 3l9p_A 212 CLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291 (367)
T ss_dssp EEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999555 499999999986644433333445568999999999999999999999999999999998 999986543
Q ss_pred CchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccccC
Q 001867 908 GEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRSKT 980 (1002)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~ 980 (1002)
..+....+...... +.....+. .+.+++.+||+.||++||++++|++.|+.+........
T Consensus 292 -~~~~~~~i~~~~~~--------~~~~~~~~----~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~~~ 351 (367)
T 3l9p_A 292 -NQEVLEFVTSGGRM--------DPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVIN 351 (367)
T ss_dssp -HHHHHHHHHTTCCC--------CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHHT
T ss_pred -HHHHHHHHHcCCCC--------CCCccCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhhcc
Confidence 23333322211110 01112222 47889999999999999999999999998876544333
No 65
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=369.82 Aligned_cols=252 Identities=24% Similarity=0.339 Sum_probs=197.1
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.+.|++.+.||+|+||.||+|+. .+|+.||||++.+... ....+.+.+|++++++++||||+
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~----------------~~~~~~~~~Ei~~l~~l~hpnIv 71 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL----------------GSDLPRIKTEIEALKNLRHQHIC 71 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-------------------CCHHHHHHHHHHTCCCTTBC
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEcccc----------------chHHHHHHHHHHHHHhCCCCCEe
Confidence 457889999999999999999996 5689999999854311 12245688999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..++||||+++|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 72 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~ 146 (347)
T 3zgw_A 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHK 146 (347)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred eEEEEEEeCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCC
Confidence 9999999999999999999999999999753 4599999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS 918 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~ 918 (1002)
+||+|||++........ ......+||+.|+|||++.+..+ +.++||||+||++|||++|..||....... ....+..
T Consensus 147 ~kL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-~~~~i~~ 224 (347)
T 3zgw_A 147 LKLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-LYKKIMR 224 (347)
T ss_dssp EEECCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred EEEEeccCcccccCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHc
Confidence 99999999986544322 22335579999999999988775 889999999999999999999997543222 2221111
Q ss_pred HhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 919 TLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.... ......+ .+.+++.+||+.||++|||++|+++.
T Consensus 225 ----~~~~-----~p~~~s~----~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 225 ----GKYD-----VPKWLSP----SSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ----TCCC-----CCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----CCCC-----CCCCCCH----HHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1110 0011222 36789999999999999999999863
No 66
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.7e-40 Score=372.33 Aligned_cols=261 Identities=26% Similarity=0.402 Sum_probs=200.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc----CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS----NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
.++|++.+.||+|+||.||+|+.. ++..||||++... ......+.+.+|+.++++++|||
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~n 107 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----------------YTEKQRRDFLGEASIMGQFDHPN 107 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT----------------CCHHHHHHHHHHHHHHTTCCCTT
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc----------------cCHHHHHHHHHHHHHHHhCCCCC
Confidence 357889999999999999999864 4678999998432 12345678999999999999999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
|+++++++.+.+..++||||+++|+|.++++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 108 iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 183 (373)
T 2qol_A 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSN 183 (373)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTT
T ss_pred CCeEEEEEeeCCceEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCC
Confidence 99999999999999999999999999999975 345699999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCc-ccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPK-SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~ 915 (1002)
+.+||+|||+++......... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....
T Consensus 184 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-~~~~~~~ 262 (373)
T 2qol_A 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-NQDVIKA 262 (373)
T ss_dssp CCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-HHHHHHH
T ss_pred CCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHH
Confidence 999999999998765432211 1223345778999999999999999999999999999998 999996543 2232222
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
+..... .+.....+ ..+.+++.+||+.||++||+++++++.|+++...
T Consensus 263 i~~~~~--------~~~~~~~~----~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 263 VDEGYR--------LPPPMDCP----AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp HHTTEE--------CCCCTTCB----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHcCCC--------CCCCcccc----HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 221111 11111222 3488899999999999999999999999998653
No 67
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.9e-40 Score=366.88 Aligned_cols=254 Identities=24% Similarity=0.321 Sum_probs=204.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~hpnIv~ 69 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----------------AVDCPENIKKEICINKMLNHENVVK 69 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------------------CHHHHHHHHHHCCCTTBCC
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccc----------------ccchHHHHHHHHHHHHhCCCCCCCe
Confidence 468889999999999999999975 68999999984321 1122466889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~ 144 (323)
T 3tki_A 70 FYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNL 144 (323)
T ss_dssp EEEEEECSSEEEEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEEecCCeEEEEEEcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCE
Confidence 99999999999999999999999999973 45699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchh-HHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKD-LVKWVCS 918 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~-~~~~~~~ 918 (1002)
||+|||+++...............||+.|+|||++.+..+ +.++||||+||++|||++|+.||........ ...+...
T Consensus 145 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~ 224 (323)
T 3tki_A 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224 (323)
T ss_dssp EECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT
T ss_pred EEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc
Confidence 9999999987654433333445679999999999987775 7789999999999999999999976543322 2222111
Q ss_pred HhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 919 TLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
... .+...... ..+.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~--------~~~~~~~~----~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 225 KTY--------LNPWKKID----SAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp CTT--------STTGGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccc--------CCccccCC----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 100 01111222 246789999999999999999999863
No 68
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.6e-40 Score=367.01 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=207.1
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.+.|++.+.||+|+||.||+|..+ +|+.||+|++.+..... .......+.+.+|+.++++++||||+
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~-----------~~~~~~~~~~~~E~~il~~l~hpnIv 78 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRA-----------SRRGVCREEIEREVSILRQVLHPNII 78 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTT-----------CSSSBCHHHHHHHHHHHTTCCCTTBC
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccc-----------ccchhHHHHHHHHHHHHHhCCCcCCC
Confidence 3467888999999999999999975 58999999996542210 01122356799999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC-
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF- 838 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~- 838 (1002)
++++++.+.+..|+||||+++|+|.+++.. .+.+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 79 ~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~ 153 (361)
T 2yab_A 79 TLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNI 153 (361)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTS
T ss_pred cEEEEEEeCCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCC
Confidence 999999999999999999999999999974 45799999999999999999999999 999999999999998776
Q ss_pred ---CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 839 ---GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 839 ---~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|+|++|..||........ ...
T Consensus 154 ~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~ 229 (361)
T 2yab_A 154 PIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN 229 (361)
T ss_dssp SSCCEEECCCSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH
T ss_pred CccCEEEEecCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH
Confidence 799999999987755322 2345799999999999999999999999999999999999999976533222 221
Q ss_pred HHHHhhccCcccccccc-ccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPK-LDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+.. .... +++. ..... ..+.+++.+|+..||++|||++|+++
T Consensus 230 i~~----~~~~--~~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 230 ITA----VSYD--FDEEFFSQTS----ELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHT----TCCC--CCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHh----cCCC--CCchhccCCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111 1110 1111 11222 24778999999999999999999984
No 69
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.1e-40 Score=356.05 Aligned_cols=257 Identities=26% Similarity=0.412 Sum_probs=209.8
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|..+++..||+|++... ....+++.+|++++++++||||++++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~h~~i~~~~ 69 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG------------------SMSEDEFFQEAQTMMKLSHPKLVKFY 69 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT------------------TBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccC------------------CCcHHHHHHHHHHHHhCCCCCEeeEE
Confidence 567888999999999999999988889999998432 11245689999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++.+.+..++||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l 145 (268)
T 3sxs_A 70 GVCSKEYPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKV 145 (268)
T ss_dssp EEECSSSSEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEE
T ss_pred EEEccCCceEEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEE
Confidence 9999999999999999999999999763 34699999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
+|||++........ .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||........ ........
T Consensus 146 ~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~~~~- 222 (268)
T 3sxs_A 146 SDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-VLKVSQGH- 222 (268)
T ss_dssp CCTTCEEECCTTCE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHHHTTC-
T ss_pred ccCccceecchhhh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-HHHHHcCC-
Confidence 99999987654432 22234456778999999998889999999999999999999 9999965432222 11111110
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
....+ .... ..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 223 -----~~~~~--~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 223 -----RLYRP--HLAS----DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -----CCCCC--TTSC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -----CCCCC--CcCh----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 00001 1122 2477899999999999999999999999988543
No 70
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.7e-40 Score=362.15 Aligned_cols=262 Identities=24% Similarity=0.316 Sum_probs=202.8
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhc--CCCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGK--IRHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv 759 (1002)
.++|++.+.||+|+||.||+|+. +++.||||++.. .....+.+|.+++.. ++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~--------------------~~~~~~~~e~~~~~~~~l~h~niv 65 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS--------------------RDEKSWFRETELYNTVMLRHENIL 65 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG--------------------GGHHHHHHHHHHHHHTCCCCTTBC
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc--------------------ccchhhHHHHHHHHHhhccCcCee
Confidence 46788899999999999999988 589999999832 123445566666666 7899999
Q ss_pred eeeeEEec----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeeeCCC
Q 001867 760 KLWCCCTT----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLH--------HDCVPSIVHRDV 827 (1002)
Q Consensus 760 ~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~iiHrDl 827 (1002)
++++++.. ....++||||+++|+|.++++. ..+++..+++++.|++.||+||| +. +|+||||
T Consensus 66 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dl 139 (301)
T 3q4u_A 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDL 139 (301)
T ss_dssp CEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCC
T ss_pred eEEEeeccccCCCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCC
Confidence 99998754 3468999999999999999953 46999999999999999999999 77 9999999
Q ss_pred CCCcEEECCCCCeEEccccCcccccCCCCCcc--cccccccccccCccccccC------CCCCccchhhHHHHHHHHHhC
Q 001867 828 KSNNILLDGDFGARVADFGVAKVVDASGKPKS--MSVIAGSCGYIAPEYAYTL------RVNEKSDIYSFGVVILELVTG 899 (1002)
Q Consensus 828 k~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~ell~g 899 (1002)
||+||+++.++.+||+|||+++.......... .....||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 140 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 140 KSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp CGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 99999999999999999999987655433211 2234799999999998876 445799999999999999999
Q ss_pred ----------CCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 001867 900 ----------RLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLL 969 (1002)
Q Consensus 900 ----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 969 (1002)
+.||.........................+.+ ..........+.+++.+||+.||++|||++|+++.|
T Consensus 220 ~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 297 (301)
T 3q4u_A 220 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN--RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297 (301)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG--GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred hcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCCh--hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHH
Confidence 88886543333222222222211111111111 111223456788999999999999999999999999
Q ss_pred HHh
Q 001867 970 QEV 972 (1002)
Q Consensus 970 ~~~ 972 (1002)
+++
T Consensus 298 ~~i 300 (301)
T 3q4u_A 298 TKI 300 (301)
T ss_dssp HHH
T ss_pred hcc
Confidence 986
No 71
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.5e-40 Score=374.08 Aligned_cols=264 Identities=23% Similarity=0.345 Sum_probs=213.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEE------cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-C
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL------SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-R 754 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 754 (1002)
.++|++.+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|+++++++ +
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~ 84 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------------THSEHRALMSELKILIHIGH 84 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----------------CHHHHHHHHHHHHHHHHHCC
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC----------------CHHHHHHHHHHHHHHHhhcC
Confidence 46788999999999999999984 235789999984321 233456799999999999 7
Q ss_pred CCceeeeeeEEecCC-eeeEEEeccCCCChhhhhhhcCC-----------------------------------------
Q 001867 755 HKNIVKLWCCCTTRD-CKLLVYEYMPNGSLGDLLHSCKG----------------------------------------- 792 (1002)
Q Consensus 755 h~niv~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------- 792 (1002)
||||+++++++.+.+ ..++||||+++|+|.++++....
T Consensus 85 hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (359)
T 3vhe_A 85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS 164 (359)
T ss_dssp CTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred CcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence 999999999998755 48999999999999999986432
Q ss_pred -----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcc
Q 001867 793 -----------------------GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAK 849 (1002)
Q Consensus 793 -----------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~ 849 (1002)
..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 241 (359)
T 3vhe_A 165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 241 (359)
T ss_dssp -------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEecccee
Confidence 1289999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhccCcccc
Q 001867 850 VVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLDQKGVDHV 928 (1002)
Q Consensus 850 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1002)
...............||+.|+|||++.+..++.++|||||||++|||++ |+.||............+.......
T Consensus 242 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~----- 316 (359)
T 3vhe_A 242 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR----- 316 (359)
T ss_dssp CTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC-----
T ss_pred eecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC-----
Confidence 7755544444455678999999999999999999999999999999998 9999976554444433332221110
Q ss_pred ccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 929 LDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 929 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
......+ .+.+++.+||+.||++|||++|+++.|+++....
T Consensus 317 ---~~~~~~~----~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 317 ---APDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ---CCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCH----HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 1111222 4788999999999999999999999999987543
No 72
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8e-40 Score=361.55 Aligned_cols=263 Identities=23% Similarity=0.301 Sum_probs=204.5
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|++.+.||+|+||+||+|+..+++.||+|++.... ........+.+|++++++++||||+++
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~hp~iv~~ 84 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA---------------EDEGIPSTAIREISLLKELHHPNIVSL 84 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC---------------------CHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc---------------ccchhhHHHHHHHHHHHHcCCCCEeee
Confidence 46788899999999999999999889999999984321 123345678899999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+++..++||||++ |+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~k 159 (311)
T 3niz_A 85 IDVIHSERCLTLVFEFME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALK 159 (311)
T ss_dssp EEEECCSSCEEEEEECCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred eeEEccCCEEEEEEcCCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEE
Confidence 999999999999999996 588888875 335699999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
|+|||+++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.................
T Consensus 160 l~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~ 237 (311)
T 3niz_A 160 LADFGLARAFGIPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILG 237 (311)
T ss_dssp ECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHC
T ss_pred EccCcCceecCCCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHC
Confidence 999999987654322 2334578999999999876 5689999999999999999999999986655444433332211
Q ss_pred hccCccc----------------cccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 921 DQKGVDH----------------VLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~----------------~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
. ..... ..+... ....+....++.+++.+|++.||++|||++|+++
T Consensus 238 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 238 T-PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp C-CCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred C-CChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1 10000 000000 0000111134778999999999999999999884
No 73
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=9.8e-40 Score=363.58 Aligned_cols=251 Identities=24% Similarity=0.312 Sum_probs=204.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.+.. .......+.+.+|+.++++++||||++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~iv~ 69 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--------------IIAKDEVAHTVTESRVLQNTRHPFLTA 69 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHHSCCCTTBCC
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHH--------------hhhhhHHHHHHHHHHHHHhCCCCcCcc
Confidence 357888899999999999999975 68999999985421 112234567889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++.. .+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 70 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~v 144 (337)
T 1o6l_A 70 LKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHI 144 (337)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred eEEEEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCE
Confidence 99999999999999999999999999974 35699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.
T Consensus 145 kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~--- 218 (337)
T 1o6l_A 145 KITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELIL--- 218 (337)
T ss_dssp EECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH---
T ss_pred EEeeccchhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-HHHHHHHH---
Confidence 999999998643322 123456799999999999999999999999999999999999999975432 22222111
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-----AMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~ 967 (1002)
.. ... + | .... ..+.+++.+||+.||++|| +++|+++
T Consensus 219 ~~-~~~--~-p--~~~s----~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 219 ME-EIR--F-P--RTLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HC-CCC--C-C--TTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cC-CCC--C-C--CCCC----HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11 110 0 1 1122 2477899999999999999 8999975
No 74
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-40 Score=367.16 Aligned_cols=263 Identities=26% Similarity=0.415 Sum_probs=212.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH 755 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 755 (1002)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|+.++++++|
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h 109 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----------------SADMQADFQREAALMAEFDN 109 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC----------------CHHHHHHHHHHHHHHHTCCC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc----------------CHHHHHHHHHHHHHHHhCCC
Confidence 367888999999999999999975 34789999984321 23346779999999999999
Q ss_pred CceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC----------------------CCCCCHHHHHHHHHHHHHHHHH
Q 001867 756 KNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK----------------------GGLLDWPTRYKIIVDAAEGLSY 813 (1002)
Q Consensus 756 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~ 813 (1002)
|||+++++++.+.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|
T Consensus 110 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~ 189 (343)
T 1luf_A 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAY 189 (343)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998643 1579999999999999999999
Q ss_pred HhhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHH
Q 001867 814 LHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVI 893 (1002)
Q Consensus 814 LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 893 (1002)
||++ +|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++
T Consensus 190 LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 266 (343)
T 1luf_A 190 LSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266 (343)
T ss_dssp HHHT---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHhC---CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHH
Confidence 9999 9999999999999999999999999999876544333333455688999999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Q 001867 894 LELVT-GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEV 972 (1002)
Q Consensus 894 ~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 972 (1002)
|||++ |..||.... ..+....+.. .... +.....+ ..+.+++.+||+.||++||+++++++.|+++
T Consensus 267 ~el~t~g~~p~~~~~-~~~~~~~~~~----~~~~----~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~ 333 (343)
T 1luf_A 267 WEIFSYGLQPYYGMA-HEEVIYYVRD----GNIL----ACPENCP----LELYNLMRLCWSKLPADRPSFCSIHRILQRM 333 (343)
T ss_dssp HHHHTTTCCTTTTSC-HHHHHHHHHT----TCCC----CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred HHHHhcCCCcCCCCC-hHHHHHHHhC----CCcC----CCCCCCC----HHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 99999 999996543 2222222211 1111 1111222 2478899999999999999999999999998
Q ss_pred hhhc
Q 001867 973 GAEN 976 (1002)
Q Consensus 973 ~~~~ 976 (1002)
....
T Consensus 334 ~~~~ 337 (343)
T 1luf_A 334 CERA 337 (343)
T ss_dssp TC--
T ss_pred Hhhh
Confidence 7544
No 75
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.4e-40 Score=362.09 Aligned_cols=261 Identities=25% Similarity=0.353 Sum_probs=213.6
Q ss_pred cCCCcCCeeeecCCccEEEEEEc------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK 756 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 756 (1002)
++|.+.+.||+|+||.||+|... +++.||||++... ......+.+.+|+.++++++||
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~~~E~~~l~~l~hp 86 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN----------------ASPSELRDLLSEFNVLKQVNHP 86 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT----------------CCHHHHHHHHHHHHHHTTCCCT
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC----------------CCHHHHHHHHHHHHHHhhCCCC
Confidence 56788899999999999999862 3578999998432 1234457789999999999999
Q ss_pred ceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCC----------------------CCCCHHHHHHHHHHHHHHHHHH
Q 001867 757 NIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG----------------------GLLDWPTRYKIIVDAAEGLSYL 814 (1002)
Q Consensus 757 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~L~~L 814 (1002)
||+++++++.+.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+||
T Consensus 87 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 166 (314)
T 2ivs_A 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL 166 (314)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH
T ss_pred ceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999986432 3489999999999999999999
Q ss_pred hhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHH
Q 001867 815 HHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVIL 894 (1002)
Q Consensus 815 H~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ 894 (1002)
|++ +|+||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|
T Consensus 167 H~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 243 (314)
T 2ivs_A 167 AEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243 (314)
T ss_dssp HHT---TEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred HHC---CCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHH
Confidence 999 99999999999999999999999999998776544333334456788999999999888999999999999999
Q ss_pred HHHh-CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Q 001867 895 ELVT-GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVG 973 (1002)
Q Consensus 895 ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 973 (1002)
||++ |+.||..... ......+...... +.....+ ..+.+++.+||+.||++||+++|+++.|+++.
T Consensus 244 el~t~g~~p~~~~~~-~~~~~~~~~~~~~--------~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 244 EIVTLGGNPYPGIPP-ERLFNLLKTGHRM--------ERPDNCS----EEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp HHHTTSCCSSTTCCG-GGHHHHHHTTCCC--------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCCH-HHHHHHhhcCCcC--------CCCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999 9999975533 3333332221110 1112222 24788999999999999999999999999986
Q ss_pred hh
Q 001867 974 AE 975 (1002)
Q Consensus 974 ~~ 975 (1002)
..
T Consensus 311 ~~ 312 (314)
T 2ivs_A 311 VK 312 (314)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 76
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9.2e-40 Score=363.94 Aligned_cols=258 Identities=24% Similarity=0.362 Sum_probs=202.7
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcE----EEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEA----VAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
++|++.+.||+|+||.||+|++. +++. ||+|.+... ......+.+.+|+.++++++|||
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~~ 78 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----------------TSPKANKEILDEAYVMASVDNPH 78 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-----------------------CHHHHHHHHHHHHHCCBTT
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc----------------cCHHHHHHHHHHHHHHHhCCCCC
Confidence 56788899999999999999964 4444 577766321 12234567999999999999999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
|+++++++.+.. .++|+||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 79 iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~ 153 (327)
T 3poz_A 79 VCRLLGICLTST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTP 153 (327)
T ss_dssp BCCEEEEEESSS-EEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEET
T ss_pred EeEEEEEEecCC-eEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCC
Confidence 999999998765 78999999999999999863 45699999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~ 916 (1002)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+
T Consensus 154 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-~~~~~~~~ 232 (327)
T 3poz_A 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEISSIL 232 (327)
T ss_dssp TEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-GGGHHHHH
T ss_pred CCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC-HHHHHHHH
Confidence 9999999999998766554444445567889999999999999999999999999999999 999997543 33333333
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
...... +...... ..+.+++.+||+.||++||+++|+++.|+.+..
T Consensus 233 ~~~~~~--------~~~~~~~----~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 233 EKGERL--------PQPPICT----IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HTTCCC--------CCCTTBC----HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred HcCCCC--------CCCccCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 221111 1111222 247889999999999999999999999998864
No 77
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1e-39 Score=361.62 Aligned_cols=263 Identities=24% Similarity=0.375 Sum_probs=216.8
Q ss_pred cCCCcCCeeeecCCccEEEEEE------cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CC
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL------SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RH 755 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 755 (1002)
++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++++ +|
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~h 86 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----------------HLTEREALMSELKVLSYLGNH 86 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----------------CHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch----------------hHHHHHHHHHHHHHHhhcccC
Confidence 5788889999999999999985 246789999984321 233467799999999999 89
Q ss_pred CceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 001867 756 KNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG----------------GLLDWPTRYKIIVDAAEGLSYLHHDCV 819 (1002)
Q Consensus 756 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ 819 (1002)
|||+++++++.+.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++
T Consensus 87 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-- 164 (313)
T 1t46_A 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-- 164 (313)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 9999999999999999999999999999999986442 2589999999999999999999999
Q ss_pred CCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-
Q 001867 820 PSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT- 898 (1002)
Q Consensus 820 ~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~- 898 (1002)
+|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||+|+++|||++
T Consensus 165 -~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~ 243 (313)
T 1t46_A 165 -NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243 (313)
T ss_dssp -TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred -CeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999987766544333444567889999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 899 GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 899 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
|+.||................... ......+ ..+.+++.+||+.||++|||++|+++.|+++....
T Consensus 244 g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 244 GSSPYPGMPVDSKFYKMIKEGFRM--------LSPEHAP----AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp TCCSSTTCCSSHHHHHHHHHTCCC--------CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCcccchhHHHHHhccCCCC--------CCcccCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 999997665444444333322111 0111222 24788999999999999999999999999987643
No 78
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-40 Score=368.14 Aligned_cols=265 Identities=23% Similarity=0.334 Sum_probs=213.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-C
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-R 754 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 754 (1002)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++++ +
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~ 107 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA----------------DSSEREALMSELKMMTQLGS 107 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------------------CHHHHHHHHHHHHHCC
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc----------------CHHHHHHHHHHHHHHHhhcC
Confidence 367888999999999999999962 35689999985321 223356799999999999 8
Q ss_pred CCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCC---------------------CCCCHHHHHHHHHHHHHHHHH
Q 001867 755 HKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG---------------------GLLDWPTRYKIIVDAAEGLSY 813 (1002)
Q Consensus 755 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~ 813 (1002)
||||+++++++...+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|
T Consensus 108 hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 187 (344)
T 1rjb_A 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 187 (344)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred CCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986432 248999999999999999999
Q ss_pred HhhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHH
Q 001867 814 LHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVI 893 (1002)
Q Consensus 814 LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 893 (1002)
||++ +|+||||||+||+++.++.+||+|||++................||+.|+|||++.+..++.++||||||+++
T Consensus 188 LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 264 (344)
T 1rjb_A 188 LEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264 (344)
T ss_dssp HHHT---TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHhC---CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHH
Confidence 9999 9999999999999999999999999999877655443344455678899999999999999999999999999
Q ss_pred HHHHh-CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Q 001867 894 LELVT-GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEV 972 (1002)
Q Consensus 894 ~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 972 (1002)
|||++ |..||............+...... +.....+ ..+.+++.+||+.||++|||++|+++.|+.+
T Consensus 265 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 265 WEIFSLGVNPYPGIPVDANFYKLIQNGFKM--------DQPFYAT----EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp HHHTTTSCCSSTTCCCSHHHHHHHHTTCCC--------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCCCCCcccCCcHHHHHHHHhcCCCC--------CCCCCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 99998 999997665444444433322111 1111222 2478899999999999999999999999998
Q ss_pred hhhcc
Q 001867 973 GAENR 977 (1002)
Q Consensus 973 ~~~~~ 977 (1002)
....+
T Consensus 333 ~~~~~ 337 (344)
T 1rjb_A 333 LADAE 337 (344)
T ss_dssp C----
T ss_pred HHHHH
Confidence 76543
No 79
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-40 Score=363.36 Aligned_cols=251 Identities=16% Similarity=0.221 Sum_probs=205.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|.+.. .....+.+.+|+.++++++||||++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~------------------~~~~~~~~~~E~~~l~~l~hpnIv~ 65 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV------------------KGTDQVLVKKEISILNIARHRNILH 65 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC------------------CTHHHHHHHHHHHHHHHSCCTTBCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEec------------------CcccHHHHHHHHHHHHhCCCCCCCe
Confidence 467888999999999999999975 588999998842 1234567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECC--CC
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDG--DF 838 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~--~~ 838 (1002)
+++++.+.+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++. ++
T Consensus 66 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~ 141 (321)
T 1tki_A 66 LHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSS 141 (321)
T ss_dssp EEEEEEETTEEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCC
T ss_pred EeEEEecCCEEEEEEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCC
Confidence 99999999999999999999999999975 335699999999999999999999999 9999999999999987 78
Q ss_pred CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS 918 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~ 918 (1002)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||............ ..
T Consensus 142 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i-~~ 217 (321)
T 1tki_A 142 TIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI-MN 217 (321)
T ss_dssp CEEECCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH-HH
T ss_pred CEEEEECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH-Hc
Confidence 99999999998775432 234557999999999999888999999999999999999999999765332222221 11
Q ss_pred HhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 919 TLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. .. ...+...... .++.+++.+|++.||++|||++|+++
T Consensus 218 ~~----~~-~~~~~~~~~s----~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 218 AE----YT-FDEEAFKEIS----IEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp TC----CC-CCHHHHTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CC----CC-CChhhhccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 00 0000111222 24788999999999999999999987
No 80
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=8.7e-40 Score=357.63 Aligned_cols=262 Identities=29% Similarity=0.401 Sum_probs=199.2
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|+.. ..||||++... .......+.+.+|+.++++++||||++++
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVT---------------APTPQQLQAFKNEVGVLRKTRHVNILLFM 86 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCS---------------SCCHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEecc---------------CCCHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 57888999999999999999864 46999998432 12344567899999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
++. ..+..++||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~-~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl 161 (289)
T 3og7_A 87 GYS-TAPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKI 161 (289)
T ss_dssp EEE-CSSSCEEEEECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEE
T ss_pred eec-cCCccEEEEEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEE
Confidence 965 45568999999999999999975 345699999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY---TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+|||+++...............||+.|+|||++. +..++.++||||+|+++|||++|+.||............+...
T Consensus 162 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 241 (289)
T 3og7_A 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241 (289)
T ss_dssp CCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHT
T ss_pred ccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccc
Confidence 9999998765433333344567999999999986 5678889999999999999999999997665544444443322
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
..... +.......+ ..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 242 ~~~~~----~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 242 SLSPD----LSKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCCCC----TTSSCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ccCcc----hhhccccCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 21111 111112222 348889999999999999999999999998753
No 81
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.3e-39 Score=352.75 Aligned_cols=254 Identities=22% Similarity=0.318 Sum_probs=206.0
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|++. ++.||||++... .......+.+.+|+.++++++||||++++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 73 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVR---------------DWSTRKSRDFNEECPRLRIFSHPNVLPVL 73 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCT---------------TCCHHHHHHHHHHGGGGCCCSCTTEECEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEeccc---------------ccCHHHHHHHHHHHHHHHhcCCCchhheE
Confidence 56788899999999999999985 889999998542 11334556799999999999999999999
Q ss_pred eEEecC--CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEECCCC
Q 001867 763 CCCTTR--DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPS--IVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 763 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--iiHrDlk~~NIll~~~~ 838 (1002)
+++.+. +..++||||+++|+|.+++.......+++..++.++.|++.||+|||++ + |+||||||+||+++.++
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~ 150 (271)
T 3kmu_A 74 GACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDM 150 (271)
T ss_dssp EEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTS
T ss_pred EEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCc
Confidence 999887 7889999999999999999876555799999999999999999999998 7 99999999999999999
Q ss_pred CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCC---ccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 839 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNE---KSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
.++++|||++...... ...||+.|+|||++.+..++. ++||||+|+++|||++|+.||............
T Consensus 151 ~~~l~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 223 (271)
T 3kmu_A 151 TARISMADVKFSFQSP-------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV 223 (271)
T ss_dssp CEEEEGGGSCCTTSCT-------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH
T ss_pred ceeEEeccceeeeccc-------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH
Confidence 9999999887643322 346899999999988765544 899999999999999999999754322221211
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
.. .. ....+ ....+. .+.+++.+||+.||++|||++|+++.|+++..
T Consensus 224 ~~----~~-~~~~~---~~~~~~----~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 224 AL----EG-LRPTI---PPGISP----HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HH----SC-CCCCC---CTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred Hh----cC-CCCCC---CCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11 11 11111 112222 47889999999999999999999999998853
No 82
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=365.55 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=203.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++.+.. .......+.+.+|+.++++++|||||+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~--------------~~~~~~~~~~~~E~~il~~l~hp~Iv~ 79 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK--------------CVERNEVRNVFKELQIMQGLEHPFLVN 79 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhh--------------cccHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 356788899999999999999965 58899999985421 112334567889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 80 l~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~v 154 (384)
T 4fr4_A 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHV 154 (384)
T ss_dssp EEEEEECSSEEEEEECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEEEeCCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCE
Confidence 99999999999999999999999999984 45799999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT---LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
||+|||+++...... .....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ......
T Consensus 155 kL~DFG~a~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-~~~~~~ 230 (384)
T 4fr4_A 155 HITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-SKEIVH 230 (384)
T ss_dssp EECCCTTCEECCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-HHHHHH
T ss_pred EEeccceeeeccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-HHHHHH
Confidence 999999998765432 2345679999999999864 458999999999999999999999997543222 111111
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPA-MRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~evl~ 967 (1002)
..... .. +...... ..+.+++.+||+.||++||+ ++++.+
T Consensus 231 ~~~~~-~~-----~~p~~~s----~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 231 TFETT-VV-----TYPSAWS----QEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHHC-CC-----CCCTTSC----HHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHhhc-cc-----CCCCcCC----HHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11111 00 0001122 24788999999999999998 777664
No 83
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.7e-40 Score=361.01 Aligned_cols=264 Identities=28% Similarity=0.391 Sum_probs=203.8
Q ss_pred cCCCcCCeeeecCCccEEEEEE-----cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-----SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++++++|||
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~~~~E~~~l~~l~h~~ 72 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----------------TEEHLRDFEREIEILKSLQHDN 72 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC-----------------CHHHHHHHHHHHHHHHTCCCTT
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC-----------------CHHHHHHHHHHHHHHHhCCCCC
Confidence 5678889999999999999984 35889999998432 3345577999999999999999
Q ss_pred eeeeeeEEec--CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 758 IVKLWCCCTT--RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 758 iv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
|+++++++.. ....++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 73 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~ 148 (295)
T 3ugc_A 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVE 148 (295)
T ss_dssp BCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred EeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEc
Confidence 9999999965 35689999999999999999863 34599999999999999999999999 999999999999999
Q ss_pred CCCCeEEccccCcccccCCCCC-cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc-----
Q 001867 836 GDFGARVADFGVAKVVDASGKP-KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE----- 909 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~----- 909 (1002)
.++.+||+|||+++........ .......++..|+|||++.+..++.++||||+|+++|||++|..|+......
T Consensus 149 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~ 228 (295)
T 3ugc_A 149 NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228 (295)
T ss_dssp ETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHH
T ss_pred CCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhh
Confidence 9999999999999877544322 1223445778899999999999999999999999999999999998542110
Q ss_pred ------hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 910 ------KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 910 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
............... ..+.....+ ..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 229 GNDKQGQMIVFHLIELLKNNG----RLPRPDGCP----DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp CTTCCTHHHHHHHHHHHHTTC----CCCCCTTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCccccchhHHHHHHHHhccC----cCCCCcCcC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 000001111111110 011112223 3488899999999999999999999999998654
No 84
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4e-40 Score=383.47 Aligned_cols=256 Identities=26% Similarity=0.476 Sum_probs=209.5
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|.++++..||||++... ....+.+.+|+.++++++||||++++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~h~~iv~l~ 249 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG------------------SMSVEAFLAEANVMKTLQHDKLVKLH 249 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT------------------SBCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC------------------CccHHHHHHHHHHHhhCCCCCEeeEE
Confidence 457778899999999999999988899999998432 12356799999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++. .+..|+||||+++|+|.++++......+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 250 ~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl 325 (454)
T 1qcf_A 250 AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKI 325 (454)
T ss_dssp EEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEE
T ss_pred EEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEE
Confidence 9987 56789999999999999999865445689999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
+|||+++....... .......+|+.|+|||++....++.++|||||||++|||++ |+.||.... ..+....+.....
T Consensus 326 ~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~-~~~~~~~i~~~~~ 403 (454)
T 1qcf_A 326 ADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-NPEVIRALERGYR 403 (454)
T ss_dssp CSTTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHHTCC
T ss_pred eeCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCC
Confidence 99999987643211 11123346788999999999999999999999999999999 999996542 2333333222111
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
.+....++. .+.+++.+||+.||++|||+++|++.|+++..
T Consensus 404 --------~~~~~~~~~----~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 404 --------MPRPENCPE----ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp --------CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred --------CCCCCCCCH----HHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 111122333 48889999999999999999999999998754
No 85
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=372.71 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=205.9
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+.+|+.++++++||||+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~---------------~~~~~~~~~~~E~~il~~l~hpnIv 73 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK---------------LSARDHQKLEREARICRLLKHPNIV 73 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS---------------CHHHHHHHHHHHHHHHHHCCBTTBC
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc---------------CCHHHHHHHHHHHHHHHhCCCcCCC
Confidence 356788899999999999999986 468999999985421 1234466789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC---C
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD---G 836 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~---~ 836 (1002)
++++++.+++..|+||||+++|+|.+++.. .+.+++..+..++.||+.||+|||++ +|+||||||+||+++ .
T Consensus 74 ~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~ 148 (444)
T 3soa_A 74 RLHDSISEEGHHYLIFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLK 148 (444)
T ss_dssp CEEEEEECSSEEEEEECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSST
T ss_pred eEEEEEEECCEEEEEEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCC
Confidence 999999999999999999999999999885 35699999999999999999999999 999999999999998 4
Q ss_pred CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 837 DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 837 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
++.+||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+
T Consensus 149 ~~~vkL~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-~~~~~~i 225 (444)
T 3soa_A 149 GAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQI 225 (444)
T ss_dssp TCCEEECCCSSCBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHH
T ss_pred CCcEEEccCceeEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-HHHHHHH
Confidence 67899999999987654322 22345799999999999999999999999999999999999999976532 2222222
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... . ....+......+ .+.+++.+|++.||++|||++|+++
T Consensus 226 ~~~~----~-~~~~~~~~~~s~----~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 226 KAGA----Y-DFPSPEWDTVTP----EAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHTC----C-CCCTTTTTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhCC----C-CCCccccccCCH----HHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111 1 111122223333 4778999999999999999999986
No 86
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.6e-39 Score=377.36 Aligned_cols=361 Identities=19% Similarity=0.179 Sum_probs=192.2
Q ss_pred CccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCccccccc
Q 001867 86 PSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQ 165 (1002)
Q Consensus 86 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~ 165 (1002)
+..++++++|++|+|++|.+++. | .|..+++|++|+|++|+|++. | ++.+++|++|+|++|++++. | |++++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~ 106 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLT 106 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCT
T ss_pred ccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCC
Confidence 34556666666777766666653 3 566666666666666666653 2 66666666666666666643 2 66666
Q ss_pred ccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccccchhcc
Q 001867 166 KLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDL 245 (1002)
Q Consensus 166 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 245 (1002)
+|++|++++|++++. | ++++++|++|++++|++.. ++ ++++++|++|++++|+..+.+ .++.+++|++|++
T Consensus 107 ~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~--l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 107 KLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTE--ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSC--CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred cCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccce--ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 666666666666643 2 5666666666666666521 22 555666666666666433333 3555556666666
Q ss_pred cCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcC
Q 001867 246 ALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSL 325 (1002)
Q Consensus 246 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~ 325 (1002)
++|++++. | +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +|
T Consensus 178 s~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip---------------------- 228 (457)
T 3bz5_A 178 SFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID---------------------- 228 (457)
T ss_dssp CSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC----------------------
T ss_pred CCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC----------------------
Confidence 66665542 2 45555555555555555543 24555555555555555554 22
Q ss_pred CcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCC
Q 001867 326 PATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQ 405 (1002)
Q Consensus 326 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~ 405 (1002)
+..+++|++|++++|++++.. +..+++|+.|++++|+ |+.|++++|.+.+.+| ++.++
T Consensus 229 ---~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~ 286 (457)
T 3bz5_A 229 ---VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCR 286 (457)
T ss_dssp ---CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCT
T ss_pred ---ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccc
Confidence 233333333444444433322 1223334444444332 2234444444444333 23445
Q ss_pred CCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccccccccccc
Q 001867 406 SLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGS 485 (1002)
Q Consensus 406 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 485 (1002)
+|+.|++++|+..+.+|. ..++|+.|++++| ++|+.|++++|++++. + ++.+++|+.|+++
T Consensus 287 ~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~ 347 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCV 347 (457)
T ss_dssp TCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECC
T ss_pred cCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECC
Confidence 555555555554444442 2233333333332 4555566666666542 2 5556666666666
Q ss_pred ccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCcc
Q 001867 486 ENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIG 546 (1002)
Q Consensus 486 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~ 546 (1002)
+|++++ ++.|..|++++|.++|. +.+..|+.++|++|+++|.||..+.
T Consensus 348 ~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 348 NAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp SSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred CCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 666653 13445556666666654 3445566666666666666665543
No 87
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=356.06 Aligned_cols=269 Identities=22% Similarity=0.271 Sum_probs=212.4
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
+.|.+.+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||+++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~iv~~ 72 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS----------------FLRPVDVQMREFEVLKKLNHKNIVKL 72 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG----------------GGSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc----------------ccchHHHHHHHHHHHHhcCCCCcceE
Confidence 46788899999999999999975 48999999984321 12235667899999999999999999
Q ss_pred eeEEecCC--eeeEEEeccCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE----
Q 001867 762 WCCCTTRD--CKLLVYEYMPNGSLGDLLHSCKG-GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL---- 834 (1002)
Q Consensus 762 ~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll---- 834 (1002)
++++.... ..++||||+++++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 149 (319)
T 4euu_A 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGE 149 (319)
T ss_dssp EEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECT
T ss_pred EEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccC
Confidence 99998655 77999999999999999986433 3499999999999999999999999 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCCCcccccccccccccCccccc--------cCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 001867 835 DGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY--------TLRVNEKSDIYSFGVVILELVTGRLPVDPE 906 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslGvil~ell~g~~p~~~~ 906 (1002)
+.++.+||+|||+++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 150 DGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp TSCEEEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCCceEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 7778899999999987755432 22456999999999876 567899999999999999999999999755
Q ss_pred CCchhHHHHHHHHhhccCc---ccc---------cc---ccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Q 001867 907 FGEKDLVKWVCSTLDQKGV---DHV---------LD---PKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQE 971 (1002)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~---~~~---------~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~ 971 (1002)
.........+......... ... .. +............+.+++.+|++.||++|||++|+++...+
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp TCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 4433333333222221110 000 00 11123345566678899999999999999999999999887
Q ss_pred hh
Q 001867 972 VG 973 (1002)
Q Consensus 972 ~~ 973 (1002)
..
T Consensus 307 ~~ 308 (319)
T 4euu_A 307 IL 308 (319)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 88
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.2e-40 Score=380.23 Aligned_cols=358 Identities=20% Similarity=0.174 Sum_probs=175.6
Q ss_pred CCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccccccc
Q 001867 109 LPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNI 188 (1002)
Q Consensus 109 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 188 (1002)
.+..++.+++|++|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++. + ++++
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred cccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 333444455555555555555432 2 344455555555555554432 2 44444444444444444432 1 4444
Q ss_pred cccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeee
Q 001867 189 STLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIE 268 (1002)
Q Consensus 189 ~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 268 (1002)
++|++|++++|++++ +| ++.+++|++|++++|++++. .+..+++|+.|+
T Consensus 106 -------------------------~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~ 154 (457)
T 3bz5_A 106 -------------------------TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELD 154 (457)
T ss_dssp -------------------------TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEE
T ss_pred -------------------------CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEE
Confidence 444444444444443 22 44445555555555555442 144445555555
Q ss_pred ccCCcccCCCCCccccccccceeeccccccCCCCCccCCCC-CcceeecCCCcccCcCCcccCCCcccchhcccccccCC
Q 001867 269 LYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRL-PLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNG 347 (1002)
Q Consensus 269 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 347 (1002)
+++|+..+.+ .+..+++|+.|++++|++++ +| +..+ .|+.|++++|++++. .+..+++|++|++++|++++
T Consensus 155 l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 155 CHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred CCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 5555333333 24555566666666666554 22 2222 144444444444432 14444455555555555554
Q ss_pred CCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCC
Q 001867 348 TLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWG 427 (1002)
Q Consensus 348 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 427 (1002)
+| +..+++|+.|++++|+++ +.. ++.+++|+.|++++|++
T Consensus 227 -ip--~~~l~~L~~L~l~~N~l~------------------------~~~---~~~l~~L~~L~l~~n~L---------- 266 (457)
T 3bz5_A 227 -ID--VTPLTQLTYFDCSVNPLT------------------------ELD---VSTLSKLTTLHCIQTDL---------- 266 (457)
T ss_dssp -CC--CTTCTTCSEEECCSSCCS------------------------CCC---CTTCTTCCEEECTTCCC----------
T ss_pred -cC--ccccCCCCEEEeeCCcCC------------------------CcC---HHHCCCCCEEeccCCCC----------
Confidence 22 444455555555555554 322 23445555555555433
Q ss_pred CCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeee
Q 001867 428 LPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLD 507 (1002)
Q Consensus 428 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 507 (1002)
+.|++++|.+.+.+| ++.+++|+.|++++|.+.+.+|. ...+|+.|++++| ++|+.|+
T Consensus 267 ----~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~ 324 (457)
T 3bz5_A 267 ----LEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLY 324 (457)
T ss_dssp ----SCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEE
T ss_pred ----CEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEE
Confidence 234555555554444 34556666666666665555553 2344444444433 4556666
Q ss_pred cCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcC
Q 001867 508 LHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSG 586 (1002)
Q Consensus 508 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g 586 (1002)
|++|+|++. | ++.+++|+.|++++|+|++ ++.|..|++++|+++|. ..+ .+..+++++|+|+|
T Consensus 325 L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g 388 (457)
T 3bz5_A 325 LNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTI 388 (457)
T ss_dssp CTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEE
T ss_pred CCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEE
Confidence 666666653 2 5566666666666666653 23445555666666654 122 45566666666666
Q ss_pred CCChh
Q 001867 587 ELPSL 591 (1002)
Q Consensus 587 ~~p~~ 591 (1002)
.||..
T Consensus 389 ~ip~~ 393 (457)
T 3bz5_A 389 AVSPD 393 (457)
T ss_dssp ECCTT
T ss_pred EcChh
Confidence 66643
No 89
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9.5e-40 Score=356.25 Aligned_cols=258 Identities=23% Similarity=0.350 Sum_probs=207.8
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|++.+.||+|+||.||+|.+.++..||+|++... ....+++.+|++++++++||||+++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~h~~i~~~ 84 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG------------------SMSEDEFIEEAKVMMNLSHEKLVQL 84 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT------------------SBCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC------------------CCCHHHHHHHHHHHhcCCCCCEeeE
Confidence 3578888999999999999999988889999998532 1124568999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+.+..++||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~k 160 (283)
T 3gen_A 85 YGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVK 160 (283)
T ss_dssp EEEECSSSSEEEEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEE
T ss_pred EEEEecCCCeEEEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEE
Confidence 99999999999999999999999999753 34699999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
|+|||+++....... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+....+....
T Consensus 161 l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-~~~~~~~~~~~ 238 (283)
T 3gen_A 161 VSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-SETAEHIAQGL 238 (283)
T ss_dssp ECSTTGGGGBCCHHH-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHTTC
T ss_pred Ecccccccccccccc-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-hHHHHHHhccc
Confidence 999999986643321 11223456788999999998999999999999999999998 9999975432 22222221111
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
. . ....... ..+.+++.+||+.||++|||++|+++.|+++..+
T Consensus 239 ~-----~---~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 239 R-----L---YRPHLAS----EKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp C-----C---CCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C-----C---CCCCcCC----HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 0 0 0011112 2478899999999999999999999999988643
No 90
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.9e-39 Score=357.58 Aligned_cols=247 Identities=22% Similarity=0.299 Sum_probs=201.5
Q ss_pred CCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeeee
Q 001867 685 LDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLWC 763 (1002)
Q Consensus 685 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 763 (1002)
|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+.++++++||||+++++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~-----------------~~~~~~~~~~E~~~l~~l~h~niv~~~~ 109 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR-----------------KQQRRELLFNEVVIMRDYQHFNVVEMYK 109 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT-----------------TCCSHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc-----------------chhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 555678999999999999975 6999999998432 1223566889999999999999999999
Q ss_pred EEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEc
Q 001867 764 CCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVA 843 (1002)
Q Consensus 764 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~ 843 (1002)
++...+..++||||+++++|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 110 ~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 183 (321)
T 2c30_A 110 SYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLS 183 (321)
T ss_dssp EEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred EEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEe
Confidence 99999999999999999999999863 4699999999999999999999999 99999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcc
Q 001867 844 DFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQK 923 (1002)
Q Consensus 844 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 923 (1002)
|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... +....+.. .
T Consensus 184 Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-~~~~~~~~----~ 256 (321)
T 2c30_A 184 DFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV-QAMKRLRD----S 256 (321)
T ss_dssp CCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHH----S
T ss_pred eeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhc----C
Confidence 9999987654322 223457999999999999999999999999999999999999999754322 22221111 1
Q ss_pred CccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 924 GVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...... ...... ..+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~--~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 257 PPPKLK--NSHKVS----PVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp SCCCCT--TGGGSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCcC--ccccCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111000 001122 24778999999999999999999986
No 91
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.5e-39 Score=364.85 Aligned_cols=254 Identities=24% Similarity=0.313 Sum_probs=205.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|..+ +++.||+|++.... ......+.+.+|+.++++++||||++
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---------------~~~~~~~~~~~E~~il~~l~hpnIv~ 92 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---------------LSARDFQKLEREARICRKLQHPNIVR 92 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---------------CCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEccc---------------CCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 467888999999999999999974 58999999985421 12334567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC--
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF-- 838 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~-- 838 (1002)
+++++.+.+..|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 93 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~ 167 (362)
T 2bdw_A 93 LHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKG 167 (362)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTT
T ss_pred EEEEEEeCCEEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCC
Confidence 99999999999999999999999999874 45699999999999999999999999 999999999999998654
Q ss_pred -CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 839 -GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 839 -~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
.+||+|||++........ .....||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+.
T Consensus 168 ~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-~~~~~~i~ 243 (362)
T 2bdw_A 168 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIK 243 (362)
T ss_dssp CCEEECCCTTCBCCTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH
T ss_pred CCEEEeecCcceEecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH
Confidence 599999999987654322 2345799999999999999999999999999999999999999975432 22222221
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.. ... ...+......+ .+.+++.+||+.||++||+++|+++.
T Consensus 244 ~~----~~~-~~~~~~~~~~~----~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 244 AG----AYD-YPSPEWDTVTP----EAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HT----CCC-CCTTGGGGSCH----HHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hC----CCC-CCcccccCCCH----HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 111 11111122232 47789999999999999999998753
No 92
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=359.75 Aligned_cols=258 Identities=23% Similarity=0.307 Sum_probs=206.8
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.+.|++.+.||+|+||.||+|... +++.||+|++....... .......+.+.+|+.++++++||||+
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------~~~~~~~~~~~~E~~~l~~l~hp~iv 77 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS-----------SRRGVSREDIEREVSILKEIQHPNVI 77 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTT-----------CSSSBCHHHHHHHHHHHHHCCCTTBC
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccc-----------ccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3456888899999999999999975 58999999986542210 01122356799999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC-
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF- 838 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~- 838 (1002)
++++++.+.+..++||||+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 78 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~ 152 (326)
T 2y0a_A 78 TLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNV 152 (326)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSS
T ss_pred cEEEEEEeCCEEEEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCC
Confidence 999999999999999999999999999974 45799999999999999999999999 999999999999999887
Q ss_pred ---CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 839 ---GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 839 ---~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||...........
T Consensus 153 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~- 228 (326)
T 2y0a_A 153 PKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN- 228 (326)
T ss_dssp SSCCEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH-
T ss_pred CCCCEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH-
Confidence 799999999987754322 2345799999999999999999999999999999999999999975532222211
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+... ... ..++...... ..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~----~~~-~~~~~~~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 229 VSAV----NYE-FEDEYFSNTS----ALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHT----CCC-CCHHHHTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHhc----CCC-cCccccccCC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 000 0001111222 24778999999999999999999986
No 93
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4e-39 Score=354.14 Aligned_cols=275 Identities=17% Similarity=0.175 Sum_probs=217.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.+.||+|+||.||+|.. .+++.||||++... ...+.+.+|+.+++++ +|++++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------------------~~~~~~~~e~~~~~~l~~~~~i~ 69 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-------------------SDAPQLRDEYRTYKLLAGCTGIP 69 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-------------------TTSCCHHHHHHHHHHTTTCTTCC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-------------------CccHHHHHHHHHHHHHhcCCCCC
Confidence 35688899999999999999996 56899999988432 1234588899999999 799999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++......++||||+ +++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 70 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~ 144 (298)
T 1csn_A 70 NVYYFGQEGLHNVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNS 144 (298)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSS
T ss_pred eEEeecCCCceeEEEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCC
Confidence 9999999999999999999 99999999863 45699999999999999999999999 9999999999999987776
Q ss_pred -----eEEccccCcccccCCCCC-----cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 840 -----ARVADFGVAKVVDASGKP-----KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 840 -----~kl~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
+||+|||+++........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 145 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 224 (298)
T 1csn_A 145 KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 224 (298)
T ss_dssp TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC
T ss_pred CCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc
Confidence 999999999877654322 1234557999999999999999999999999999999999999999764332
Q ss_pred hh--HHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccccCCCCCCCC
Q 001867 910 KD--LVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKKDGKL 987 (1002)
Q Consensus 910 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~~~~~~~ 987 (1002)
.. ....+........... .....+ ..+.+++.+||+.||++||++++|++.|+++..... ....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~------~~~~ 290 (298)
T 1csn_A 225 TNKQKYERIGEKKQSTPLRE----LCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN------TTED 290 (298)
T ss_dssp CHHHHHHHHHHHHHHSCHHH----HTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT------CCSC
T ss_pred ccHHHHHHHHhhccCccHHH----HHhhCc----HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC------CCCC
Confidence 22 1111111111111111 011222 247889999999999999999999999999976432 2345
Q ss_pred Ccchhhc
Q 001867 988 SPYYHED 994 (1002)
Q Consensus 988 ~~~~~~~ 994 (1002)
.|+.|+.
T Consensus 291 ~~~dw~~ 297 (298)
T 1csn_A 291 ENFDWNL 297 (298)
T ss_dssp SCCGGGC
T ss_pred CccccCC
Confidence 6677753
No 94
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.4e-40 Score=366.13 Aligned_cols=264 Identities=23% Similarity=0.370 Sum_probs=215.5
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcC-C-----cEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-C
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSN-G-----EAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-R 754 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 754 (1002)
.++|++.+.||+|+||.||+|.... + ..||+|++.... .....+.+.+|+.+++++ +
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~ 108 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA----------------HADEKEALMSELKIMSHLGQ 108 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC----------------CHHHHHHHHHHHHHHHHHCC
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc----------------ChHHHHHHHHHHHHHHhhcC
Confidence 3678889999999999999999642 2 479999984321 233467799999999999 8
Q ss_pred CCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 001867 755 HKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK------------GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSI 822 (1002)
Q Consensus 755 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 822 (1002)
||||+++++++.+.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|
T Consensus 109 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i 185 (333)
T 2i1m_A 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NC 185 (333)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred CCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---Cc
Confidence 9999999999999999999999999999999987542 34689999999999999999999999 99
Q ss_pred eeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCC
Q 001867 823 VHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRL 901 (1002)
Q Consensus 823 iHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~ 901 (1002)
+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |..
T Consensus 186 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 265 (333)
T 2i1m_A 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265 (333)
T ss_dssp ECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999987655443333344567889999999999999999999999999999999 889
Q ss_pred CCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 902 PVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 902 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
||.................... .....+ ..+.+++.+||+.||++|||++|+++.|+++....
T Consensus 266 p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 266 PYPGILVNSKFYKLVKDGYQMA--------QPAFAP----KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp SSTTCCSSHHHHHHHHHTCCCC--------CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCcccchhHHHHHHHhcCCCCC--------CCCCCC----HHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 9976554444444333221110 111122 24788999999999999999999999999886543
No 95
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.9e-39 Score=359.66 Aligned_cols=263 Identities=22% Similarity=0.327 Sum_probs=196.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC-Cc---EEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN-GE---AVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|++.+.||+|+||.||+|.... ++ .||||++... .......+.+.+|++++++++||||
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~h~~i 87 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD---------------IIASSDIEEFLREAACMKEFDHPHV 87 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC---------------------CHHHHHHHHHHHHHTTCCCTTB
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccc---------------ccCHHHHHHHHHHHHHHHHCCCCce
Confidence 578889999999999999999653 32 7999998432 1123446789999999999999999
Q ss_pred eeeeeEEecCCee------eEEEeccCCCChhhhhhhcCC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCC
Q 001867 759 VKLWCCCTTRDCK------LLVYEYMPNGSLGDLLHSCKG----GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVK 828 (1002)
Q Consensus 759 v~l~~~~~~~~~~------~lv~e~~~~g~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk 828 (1002)
+++++++...+.. ++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+|||||
T Consensus 88 v~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dik 164 (323)
T 3qup_A 88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLA 164 (323)
T ss_dssp CCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred ehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCC
Confidence 9999999877655 999999999999999865332 2599999999999999999999999 99999999
Q ss_pred CCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCC
Q 001867 829 SNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEF 907 (1002)
Q Consensus 829 ~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~ 907 (1002)
|+||+++.++.+||+|||+++...............+++.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 165 p~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp GGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 9999999999999999999987765544444445567889999999999999999999999999999999 899987654
Q ss_pred CchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 908 GEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
.. +....+...... +.....+ ..+.+++.+||+.||++|||+.++++.|+++....
T Consensus 245 ~~-~~~~~~~~~~~~--------~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 245 NA-EIYNYLIGGNRL--------KQPPECM----EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp GG-GHHHHHHTTCCC--------CCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hH-HHHHHHhcCCCC--------CCCCccC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 33 322222211110 1111222 34888999999999999999999999999987543
No 96
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.6e-39 Score=355.25 Aligned_cols=263 Identities=24% Similarity=0.333 Sum_probs=200.5
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|+..+++.||+|++.... .+....+.+.+|+.++++++||||++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 66 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEK---------------EDEGIPSTTIREISILKELKHSNIVKLY 66 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSS---------------GGGCCCHHHHHHHHGGGGCCCTTBCCEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccc---------------cccccchhHHHHHHHHHhcCCCCEeeee
Confidence 5688889999999999999999889999999984321 1122345688999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++.+.+..++||||++ ++|.+++... .+.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 67 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 141 (288)
T 1ob3_A 67 DVIHTKKRLVLVFEHLD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKI 141 (288)
T ss_dssp EEEECSSCEEEEEECCS-EEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred eEEccCCeEEEEEEecC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEE
Confidence 99999999999999996 5999998753 35699999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
+|||+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..................
T Consensus 142 ~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 219 (288)
T 1ob3_A 142 ADFGLARAFGIPVR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219 (288)
T ss_dssp CCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred eECccccccCcccc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCC
Confidence 99999987653321 22345689999999998764 5899999999999999999999999765433333332221110
Q ss_pred cc--Ccc-----ccccccc--------cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 922 QK--GVD-----HVLDPKL--------DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 922 ~~--~~~-----~~~~~~~--------~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. ... ...++.. ..........+.+++.+|++.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 220 PNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000 0000000 0000111234778999999999999999999874
No 97
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=357.28 Aligned_cols=248 Identities=26% Similarity=0.335 Sum_probs=204.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.+.. .......+.+.+|+.+++.++||||++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~Iv~ 70 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI--------------VVRLKQVEHTNDERLMLSIVTHPFIIR 70 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHHSCCBTTBCC
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHhhCCCCCCce
Confidence 356888899999999999999975 68999999985431 112234567889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 71 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~ 145 (318)
T 1fot_A 71 MWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHI 145 (318)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCE
T ss_pred EeEEEEeCCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCE
Confidence 99999999999999999999999999985 35699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||+++..... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||........+.....
T Consensus 146 kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~--- 217 (318)
T 1fot_A 146 KITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN--- 217 (318)
T ss_dssp EECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---
T ss_pred EEeecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh---
Confidence 99999999876432 2245799999999999999999999999999999999999999976533222222211
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-----AMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~ 967 (1002)
. ... +. .... .++.+++.+|++.||++|| +++|+++
T Consensus 218 -~-~~~--~p---~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 218 -A-ELR--FP---PFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -C-CCC--CC---TTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -C-CCC--CC---CCCC----HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1 110 00 1122 2477899999999999999 8888884
No 98
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=6.8e-40 Score=370.81 Aligned_cols=278 Identities=14% Similarity=0.188 Sum_probs=211.7
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC------CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN------GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK 756 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 756 (1002)
++|++.+.||+|+||.||+|.+.+ ++.||||++....... ..............+..|+..++.++||
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~e~~~~~~~~~~~~~~e~~~~~~l~h~ 108 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPL------FTELKFYQRAAKPEQIQKWIRTRKLKYL 108 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHH------HHHHHHHHHHCCHHHHHHHHHHTTCSCC
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhH------HHHHHHHHhhhhhHHHHHHHHHhhccCC
Confidence 478889999999999999999754 4789999985431100 0000111122233455677788888999
Q ss_pred ceeeeeeEEecC----CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 001867 757 NIVKLWCCCTTR----DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNI 832 (1002)
Q Consensus 757 niv~l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NI 832 (1002)
||+++++++... ...|+||||+ +++|.+++.. ..+.+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 109 ~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Ni 183 (364)
T 3op5_A 109 GVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNL 183 (364)
T ss_dssp CSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred CCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHE
Confidence 999999999764 4589999999 9999999986 346799999999999999999999999 999999999999
Q ss_pred EEC--CCCCeEEccccCcccccCCCCCc-----ccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 001867 833 LLD--GDFGARVADFGVAKVVDASGKPK-----SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDP 905 (1002)
Q Consensus 833 ll~--~~~~~kl~DfGl~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~ 905 (1002)
+++ .++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 998 88999999999998765432211 11344599999999999999999999999999999999999999986
Q ss_pred CCCchhHHHHHHHHhhccCccccccccc--cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 906 EFGEKDLVKWVCSTLDQKGVDHVLDPKL--DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
................. .....+++.+ ...+. ++.+++..||+.||++||+++++++.|+++....
T Consensus 264 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 264 NLKDPKYVRDSKIRYRE-NIASLMDKCFPAANAPG----EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp GTTCHHHHHHHHHHHHH-CHHHHHHHHSCTTCCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cccCHHHHHHHHHHhhh-hHHHHHHHhcccccCHH----HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 54444444433332221 2222222222 12222 4788999999999999999999999999987644
No 99
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.8e-39 Score=374.47 Aligned_cols=251 Identities=29% Similarity=0.400 Sum_probs=206.9
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|.+. ++.||||+++.. ...+.+.+|+.++++++||||++++
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~-------------------~~~~~~~~E~~~l~~l~h~niv~~~ 252 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-------------------ATAQAFLAEASVMTQLRHSNLVQLL 252 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSC-------------------TTSHHHHHHHHHHHTCCCTTBCCEE
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCc-------------------hHHHHHHHHHHHHHhccCCCEEEEE
Confidence 56778899999999999999986 789999998431 1345789999999999999999999
Q ss_pred eEEecCC-eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 763 CCCTTRD-CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 763 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
+++...+ ..|+||||+++|+|.++++......+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 253 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~k 329 (450)
T 1k9a_A 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAK 329 (450)
T ss_dssp EEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEE
T ss_pred EEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEE
Confidence 9987665 789999999999999999876556689999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
|+|||+++...... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+....
T Consensus 330 l~DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-~~~~~~i~~~~ 403 (450)
T 1k9a_A 330 VSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPRVEKGY 403 (450)
T ss_dssp ECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-TTHHHHHHTTC
T ss_pred EeeCCCcccccccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCC
Confidence 99999998543321 12357889999999999999999999999999999998 9999975433 33333332211
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
.. +....+++ .+.+++.+||+.||++|||++++++.|+++..
T Consensus 404 ~~--------~~p~~~~~----~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 404 KM--------DAPDGCPP----AVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CC--------CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC--------CCCCcCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 10 11122333 47889999999999999999999999998864
No 100
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.8e-39 Score=353.12 Aligned_cols=263 Identities=22% Similarity=0.301 Sum_probs=204.2
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+.+|+.++++++||||+++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~iv~~ 66 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD---------------DDEGVPSSALREICLLKELKHKNIVRL 66 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC---------------SSTTHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC---------------CcCCcchHHHHHHHHHhcCCCCCEeeE
Confidence 56888899999999999999974 58999999985421 123345678899999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+++..++||||++ |++.+++.. ..+.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~k 141 (292)
T 3o0g_A 67 HDVLHSDKKLTLVFEFCD-QDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELK 141 (292)
T ss_dssp EEEEEETTEEEEEEECCS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EeEEEeCCEEEEEEecCC-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEE
Confidence 999999999999999996 566666654 346799999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLR-VNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
|+|||+++....... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....+..+....+....
T Consensus 142 l~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~ 219 (292)
T 3o0g_A 142 LANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219 (292)
T ss_dssp ECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH
T ss_pred EeecccceecCCccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh
Confidence 999999987654322 233457899999999987765 79999999999999999999999765555444443333222
Q ss_pred hccCccc------ccc----------ccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 921 DQKGVDH------VLD----------PKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~------~~~----------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
....... ..+ .......+.....+.+++.+|++.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 220 GTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 1110000 000 0000111112234778999999999999999998873
No 101
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-39 Score=383.53 Aligned_cols=256 Identities=23% Similarity=0.373 Sum_probs=212.0
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC-CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN-GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||.||+|.++. +..||||++... ....+.|.+|+.++++++||||+++
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~hpniv~l 281 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------------------TMEVEEFLKEAAVMKEIKHPNLVQL 281 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS------------------SSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc------------------ccchHHHHHHHHHHHhcCCCCEeeE
Confidence 457778899999999999999764 889999998432 1235679999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+.+..|+||||+++|+|.++++......+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 282 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~k 358 (495)
T 1opk_A 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVK 358 (495)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEE
T ss_pred EEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEE
Confidence 99999999999999999999999999876667799999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
|+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+..+.+....
T Consensus 359 l~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~ 436 (495)
T 1opk_A 359 VADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDY 436 (495)
T ss_dssp ECCTTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGHHHHHHTTC
T ss_pred EeecccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCC
Confidence 999999987654321 12223456789999999998899999999999999999999 888886543 333333332211
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVG 973 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 973 (1002)
.. +....++. .+.+++.+||+.||++|||++++++.|+++.
T Consensus 437 ~~--------~~~~~~~~----~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 437 RM--------ERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CC--------CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CC--------CCCCCCCH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11 11122232 4788999999999999999999999999874
No 102
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-39 Score=362.87 Aligned_cols=249 Identities=25% Similarity=0.358 Sum_probs=201.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.+... ........+.+|+.+++.++||||++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~~~E~~~l~~l~hpnIv~ 73 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL--------------KKSDMHMRVEREISYLKLLRHPHIIK 73 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--------------HHTTCSHHHHHHHHHHTTCCCTTBCC
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHc--------------cchhHHHHHHHHHHHHHhCCCCCCCe
Confidence 35788899999999999999996 5689999999854211 11222456899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+ +|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 74 l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~ 147 (336)
T 3h4j_B 74 LYDVITTPTDIVMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNV 147 (336)
T ss_dssp EEEEEECSSEEEEEECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCE
T ss_pred EEEEEEeCCEEEEEEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCE
Confidence 999999999999999999 78999988753 5699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++........ ....+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.........
T Consensus 148 kl~DFG~s~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~------- 217 (336)
T 3h4j_B 148 KIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF------- 217 (336)
T ss_dssp EECCSSCTBTTTTSBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-------
T ss_pred EEEEeccceeccCCcc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-------
Confidence 9999999987654322 234579999999999988776 68999999999999999999999754321110
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
............... ..+.+++.+||+.||.+|||++|+++
T Consensus 218 ---~~i~~~~~~~p~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 218 ---KKVNSCVYVMPDFLS----PGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ---CCCCSSCCCCCTTSC----HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ---HHHHcCCCCCcccCC----HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 000000001111122 24778999999999999999999985
No 103
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-39 Score=378.67 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=204.2
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|.++++..||||++... ....+.+.+|+.++++++||||++++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~hp~iv~~~ 245 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG------------------TMSPEAFLQEAQVMKKLRHEKLVQLY 245 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT------------------SSCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccC------------------CCCHHHHHHHHHHHHhCCCCCEeeEE
Confidence 457778899999999999999988888999998432 11246789999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++.+ +..++||||+++|+|.++++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 246 ~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl 321 (452)
T 1fmk_A 246 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKV 321 (452)
T ss_dssp EEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEE
Confidence 99876 6789999999999999999865556799999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+.....
T Consensus 322 ~DfG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-~~~~~~~i~~~~~ 399 (452)
T 1fmk_A 322 ADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NREVLDQVERGYR 399 (452)
T ss_dssp CCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHHTTCC
T ss_pred CCCccceecCCCce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCC
Confidence 99999987654322 12223457789999999999999999999999999999999 899986543 2233322221111
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
.+....++ ..+.+++.+||+.||++|||++++++.|+++..
T Consensus 400 --------~~~~~~~~----~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 400 --------MPCPPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp --------CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred --------CCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 01112233 247889999999999999999999999998864
No 104
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=9.6e-40 Score=366.10 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=200.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.++||+|+||.||+|+.+ +++.||||++.+.. .......+.+.+|..+++.+ +||||+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~--------------~~~~~~~~~~~~E~~il~~~~~hp~Iv 87 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV--------------ILQDDDVECTMTEKRILSLARNHPFLT 87 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--------------HHHHTTHHHHHHHHHHHHHTTTCTTBC
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH--------------hcchhHHHHHHHHHHHHHhccCCCcee
Confidence 578899999999999999999975 58999999985421 11233456788999999988 699999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..|+||||+++|+|.+++... +.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 88 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ 162 (353)
T 3txo_A 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGH 162 (353)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred eEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCC
Confidence 9999999999999999999999999999753 5699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.
T Consensus 163 ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~-- 237 (353)
T 3txo_A 163 CKLADFGMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAIL-- 237 (353)
T ss_dssp EEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH--
T ss_pred EEEccccceeecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHH--
Confidence 9999999998543322 22345679999999999999999999999999999999999999997653322 222211
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAM------RRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~evl~ 967 (1002)
.. ... .| .... ..+.+++.+|++.||++||++ +|+++
T Consensus 238 -~~-~~~---~p--~~~~----~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 238 -ND-EVV---YP--TWLH----EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -HC-CCC---CC--TTSC----HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -cC-CCC---CC--CCCC----HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 100 01 1122 247789999999999999998 67764
No 105
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.7e-39 Score=351.89 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=194.2
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|.+. ++.||||++...... ......+.+.+|+++++.++||||++++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~-------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 72 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDE-------------DISQTIENVRQEAKLFAMLKHPNIIALR 72 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC-----------------------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcc-------------cHHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 56778899999999999999975 889999998543111 1123356789999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECC------
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDG------ 836 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~------ 836 (1002)
+++.+++..++||||+++++|.+++. .+.+++..++.++.|++.||+|||+++..+|+||||||+||+++.
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~ 149 (271)
T 3dtc_A 73 GVCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGD 149 (271)
T ss_dssp EEECCC--CEEEEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSC
T ss_pred EEEecCCceEEEEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccc
Confidence 99999999999999999999999985 356999999999999999999999992222999999999999986
Q ss_pred --CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHH
Q 001867 837 --DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVK 914 (1002)
Q Consensus 837 --~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~ 914 (1002)
++.+||+|||+++....... ....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...........
T Consensus 150 ~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 225 (271)
T 3dtc_A 150 LSNKILKITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG 225 (271)
T ss_dssp CSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH
T ss_pred ccCcceEEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHh
Confidence 67899999999986654322 234689999999999999999999999999999999999999975432221111
Q ss_pred HHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Q 001867 915 WVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEV 972 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 972 (1002)
. . ..... .+.....+ ..+.+++.+||+.||++|||++|+++.|+++
T Consensus 226 ~----~-~~~~~---~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 V----A-MNKLA---LPIPSTCP----EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp H----H-TSCCC---CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred h----h-cCCCC---CCCCcccC----HHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1 1 11111 01112222 2478899999999999999999999999753
No 106
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.8e-39 Score=358.88 Aligned_cols=264 Identities=18% Similarity=0.206 Sum_probs=210.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+.+++++ +||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------------------~~~~~~~~E~~~l~~l~~h~~i~ 68 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK-------------------SRAPQLHLEYRFYKQLGSGDGIP 68 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETT-------------------CSSCCHHHHHHHHHHHCSCTTSC
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccc-------------------cchHHHHHHHHHHHHhhCCCCCC
Confidence 35788899999999999999996 56899999988432 1124588999999999 899999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++...+..++||||+ +++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 69 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~ 143 (330)
T 2izr_A 69 QVYYFGPCGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGN 143 (330)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGG
T ss_pred EEEEEEecCCccEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCC
Confidence 9999999999999999999 99999999864 45799999999999999999999999 9999999999999998887
Q ss_pred -----eEEccccCcccccCCCCCc-----ccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 840 -----ARVADFGVAKVVDASGKPK-----SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 840 -----~kl~DfGl~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 144 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~ 223 (330)
T 2izr_A 144 KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD 223 (330)
T ss_dssp TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS
T ss_pred CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc
Confidence 9999999998765433211 123567999999999999999999999999999999999999999764322
Q ss_pred hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 910 KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
+............. .. ..+......+ ++.+++..||+.||++||+++++.+.|+++....
T Consensus 224 -~~~~~~~~i~~~~~-~~-~~~~~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 224 -TLKERYQKIGDTKR-AT-PIEVLCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -SHHHHHHHHHHHHH-HS-CHHHHTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -cHHHHHHHHHhhhc-cC-CHHHHhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 22222211111000 00 0000111122 5888999999999999999999999999887544
No 107
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=352.96 Aligned_cols=258 Identities=28% Similarity=0.448 Sum_probs=199.4
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|+.. ++.||||++.. ....+.+.+|+.++++++||||++++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-------------------~~~~~~~~~E~~~l~~l~hp~iv~~~ 67 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES-------------------ESERKAFIVELRQLSRVNHPNIVKLY 67 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS-------------------TTHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC-------------------hhHHHHHHHHHHHHhcCCCCCcCeEE
Confidence 45777889999999999999985 78999998732 22456789999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC-e
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKG-GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG-A 840 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~-~ 840 (1002)
+++.+ ..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +
T Consensus 68 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~ 145 (307)
T 2eva_A 68 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145 (307)
T ss_dssp EBCTT--TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEE
T ss_pred EEEcC--CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEE
Confidence 98874 47999999999999999985432 35789999999999999999999932129999999999999998887 7
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...........+. ..
T Consensus 146 kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~--~~ 218 (307)
T 2eva_A 146 KICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA--VH 218 (307)
T ss_dssp EECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHH--HH
T ss_pred EEcccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHH--Hh
Confidence 99999999765432 123468999999999999999999999999999999999999997543322211111 11
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccc
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRS 978 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 978 (1002)
... . .+.....+. .+.+++.+||+.||++|||++|+++.|+++.+....
T Consensus 219 ~~~-~----~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 219 NGT-R----PPLIKNLPK----PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp TTC-C----CCCBTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred cCC-C----CCcccccCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 111 0 111122222 477899999999999999999999999998764433
No 108
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.2e-39 Score=367.97 Aligned_cols=269 Identities=21% Similarity=0.210 Sum_probs=207.5
Q ss_pred hcCCCcCCeeeec--CCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 682 LDGLDEDNVIGSG--SSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 682 ~~~~~~~~~LG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
.++|++.+.||+| +||.||+|+.+ +++.||||++.... ......+.+.+|+.++++++||||
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~ni 88 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA---------------CSNEMVTFLQGELHVSKLFNHPNI 88 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG---------------SCHHHHHHHHHHHHHHHHCCCTTB
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc---------------cChHHHHHHHHHHHHHHhCCCCCC
Confidence 3578889999999 99999999975 68999999985421 123456778999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
|++++++.+++..|+||||+++|+|.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~ 165 (389)
T 3gni_B 89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDG 165 (389)
T ss_dssp CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTC
T ss_pred CcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 99999999999999999999999999999876667799999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCC-----CcccccccccccccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchh
Q 001867 839 GARVADFGVAKVVDASGK-----PKSMSVIAGSCGYIAPEYAYT--LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD 911 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~ 911 (1002)
.+||+|||.+........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 245 (389)
T 3gni_B 166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 245 (389)
T ss_dssp CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH
T ss_pred CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999999999865432211 111223478999999999987 6789999999999999999999999976544433
Q ss_pred HHHHHHHHhhcc----------------------Ccccc----------ccccccCCCHHHHHHHHHHHHHcCCCCCCCC
Q 001867 912 LVKWVCSTLDQK----------------------GVDHV----------LDPKLDCCFKEEICKVLNIGLLCTSPLPINR 959 (1002)
Q Consensus 912 ~~~~~~~~~~~~----------------------~~~~~----------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 959 (1002)
............ ..... .+.............+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 325 (389)
T 3gni_B 246 LLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR 325 (389)
T ss_dssp HHHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTS
T ss_pred HHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccC
Confidence 322221111000 00000 0000000111122358889999999999999
Q ss_pred CCHHHHHHH
Q 001867 960 PAMRRVVKL 968 (1002)
Q Consensus 960 ps~~evl~~ 968 (1002)
||++|+++.
T Consensus 326 pta~ell~h 334 (389)
T 3gni_B 326 PSASTLLNH 334 (389)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhcC
Confidence 999999853
No 109
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.1e-39 Score=359.52 Aligned_cols=258 Identities=26% Similarity=0.347 Sum_probs=203.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcE----EEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEA----VAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
++|++.+.||+|+||.||+|.+. +++. ||+|.+.... .....+.+.+|+.++++++|||
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~ 76 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS----------------GRQSFQAVTDHMLAIGSLDHAH 76 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT----------------SCSCBCSCCHHHHHHHTCCCTT
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc----------------cHHHHHHHHHHHHHHhcCCCCC
Confidence 46778899999999999999964 4444 7777663221 1122345778999999999999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
|+++++++. .+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 77 iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~ 151 (325)
T 3kex_A 77 IVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSP 151 (325)
T ss_dssp BCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSS
T ss_pred cCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCC
Confidence 999999986 45689999999999999999753 35689999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~ 916 (1002)
+.+||+|||+++...............||..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+
T Consensus 152 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~ 230 (325)
T 3kex_A 152 SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-AEVPDLL 230 (325)
T ss_dssp SCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-THHHHHH
T ss_pred CeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-HHHHHHH
Confidence 9999999999998766554444456678889999999999999999999999999999999 9999975432 2333322
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
....... . + ..... .+.+++.+||+.||++||+++|+++.|+++..
T Consensus 231 ~~~~~~~-~-----~--~~~~~----~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 231 EKGERLA-Q-----P--QICTI----DVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp HTTCBCC-C-----C--TTBCT----TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred HcCCCCC-C-----C--CcCcH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 2211110 0 0 11111 36688999999999999999999999999864
No 110
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.2e-39 Score=359.20 Aligned_cols=264 Identities=24% Similarity=0.365 Sum_probs=213.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc--------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS--------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI 753 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 753 (1002)
.++|++.+.||+|+||.||+|... ++..||||++.... .....+.+.+|+.+++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l 97 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----------------TEKDLSDLVSEMEMMKMI 97 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC----------------CHHHHHHHHHHHHHHHHH
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC----------------cHHHHHHHHHHHHHHHHh
Confidence 357888999999999999999863 46789999984321 234466789999999999
Q ss_pred -CCCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhcC
Q 001867 754 -RHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG--------------GLLDWPTRYKIIVDAAEGLSYLHHDC 818 (1002)
Q Consensus 754 -~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~ 818 (1002)
+||||+++++++.+.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++
T Consensus 98 ~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~- 176 (334)
T 2pvf_A 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 176 (334)
T ss_dssp CCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 899999999999999999999999999999999986432 3489999999999999999999999
Q ss_pred CCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh
Q 001867 819 VPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT 898 (1002)
Q Consensus 819 ~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~ 898 (1002)
+|+||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++
T Consensus 177 --~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt 254 (334)
T 2pvf_A 177 --KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254 (334)
T ss_dssp --TEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred --CeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999987765443333344567889999999998889999999999999999999
Q ss_pred -CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhcc
Q 001867 899 -GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 899 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 977 (1002)
|+.||.... ..+....+...... +...... ..+.+++.+||+.||++||+++|+++.|+++.....
T Consensus 255 ~g~~p~~~~~-~~~~~~~~~~~~~~--------~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 255 LGGSPYPGIP-VEELFKLLKEGHRM--------DKPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp TSCCSSTTCC-HHHHHHHHHHTCCC--------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCcCcCC-HHHHHHHHhcCCCC--------CCCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 999986542 23333222221110 1111222 247889999999999999999999999999976443
No 111
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.2e-39 Score=349.34 Aligned_cols=259 Identities=23% Similarity=0.309 Sum_probs=197.8
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC----CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN----GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|++.+.||+|+||.||+|.... +..||+|++... ......+.+.+|+.++++++||||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~~i 78 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----------------TSDSVREKFLQEALTMRQFDHPHI 78 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT----------------TSHHHHHHHHHHHHHHHTCCCTTB
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc----------------CCHHHHHHHHHHHHHHHhCCCCcc
Confidence 567888999999999999998743 457999987331 123456779999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
+++++++. ++..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 79 v~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 153 (281)
T 1mp8_A 79 VKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 153 (281)
T ss_dssp CCEEEEEC-SSSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETT
T ss_pred ceEEEEEc-cCccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCC
Confidence 99999985 45689999999999999999763 45699999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~ 917 (1002)
.+||+|||+++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||...... +....+.
T Consensus 154 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-~~~~~i~ 231 (281)
T 1mp8_A 154 CVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIE 231 (281)
T ss_dssp EEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHH
T ss_pred CEEECccccccccCccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-HHHHHHH
Confidence 9999999999877544322 2234457789999999998999999999999999999997 89999765433 3332222
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
.... .+.....+ ..+.+++.+||+.||++|||++|+++.|+++....
T Consensus 232 ~~~~--------~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 232 NGER--------LPMPPNCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp TTCC--------CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCC--------CCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1110 01112222 24778999999999999999999999999986543
No 112
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.2e-39 Score=360.72 Aligned_cols=248 Identities=23% Similarity=0.269 Sum_probs=204.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.+.. .......+.+.+|+.++++++||||++
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~iv~ 105 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK--------------VVKLKQIEHTLNEKRILQAVNFPFLVK 105 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHTTCCCTTBCC
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHH--------------hccHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 467888899999999999999975 68999999985421 112234567889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++... +.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 106 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~ 180 (350)
T 1rdq_E 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYI 180 (350)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEEEcCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCE
Confidence 999999999999999999999999999853 4699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||+++..... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.
T Consensus 181 kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~--- 251 (350)
T 1rdq_E 181 QVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIV--- 251 (350)
T ss_dssp EECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH---
T ss_pred EEcccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-HHHHHH---
Confidence 99999999876543 224579999999999999999999999999999999999999997553222 222111
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPA-----MRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~ 967 (1002)
.. ... +. .... ..+.+++.+||+.||++||+ ++|+++
T Consensus 252 ~~-~~~--~p---~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 252 SG-KVR--FP---SHFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HC-CCC--CC---TTCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred cC-CCC--CC---CCCC----HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11 110 00 1122 24788999999999999998 888874
No 113
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3e-39 Score=366.01 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=198.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.++||+|+||.||+|+.+ +++.||+|++.+... ......+.+..|..++.++ +||||+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~--------------~~~~~~~~~~~E~~il~~~~~hp~Iv 116 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELV--------------NDDEDIDWVQTEKHVFEQASNHPFLV 116 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGT--------------C----CCHHHHHHHHHHHHTTCTTBC
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc--------------cCHHHHHHHHHHHHHHHhcCCCCCcC
Confidence 467888999999999999999975 578999999865321 1233445688899999887 799999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..|+||||+++|+|.+++... +.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 117 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 191 (396)
T 4dc2_A 117 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGH 191 (396)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred eeEEEEEECCEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCC
Confidence 9999999999999999999999999999853 5699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCch----hHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK----DLVKW 915 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~----~~~~~ 915 (1002)
+||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....
T Consensus 192 ikL~DFGla~~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~ 269 (396)
T 4dc2_A 192 IKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269 (396)
T ss_dssp EEECCCTTCBCCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHH
T ss_pred EEEeecceeeecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHH
Confidence 9999999998633222 22345689999999999999999999999999999999999999996432111 11111
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAM 962 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 962 (1002)
........... + ..... .++.+++.+||+.||++||++
T Consensus 270 ~~~~i~~~~~~--~---p~~~s----~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 270 LFQVILEKQIR--I---PRSLS----VKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHHCCCC--C---CTTSC----HHHHHHHHHHTCSCTTTSTTC
T ss_pred HHHHHhccccC--C---CCcCC----HHHHHHHHHHhcCCHhHcCCC
Confidence 11111111111 0 01122 247789999999999999995
No 114
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-39 Score=348.81 Aligned_cols=256 Identities=28% Similarity=0.438 Sum_probs=209.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|...+++.||+|++... ....+.+.+|++++++++||||++++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~------------------~~~~~~~~~e~~~l~~l~h~~i~~~~ 69 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG------------------AMSEEDFIEEAEVMMKLSHPKLVQLY 69 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT------------------TBCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEcccc------------------CCCHHHHHHHHHHHHhCCCCCEeeEE
Confidence 467788999999999999999988899999998432 11235789999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++.+.+..++||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl 145 (267)
T 3t9t_A 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKV 145 (267)
T ss_dssp EEECSSSSCEEEECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEE
T ss_pred EEEccCCCeEEEEeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEE
Confidence 9999999999999999999999999763 35689999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
+|||++....... ........++..|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+.....
T Consensus 146 ~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~i~~~~~ 223 (267)
T 3t9t_A 146 SDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTGFR 223 (267)
T ss_dssp CCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTTCC
T ss_pred ccccccccccccc-ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-HHHHHHHhcCCc
Confidence 9999998664321 111223457788999999998899999999999999999999 8999875432 222222211110
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
. ....... ..+.+++.+||+.||++||+++++++.|+++..
T Consensus 224 -----~---~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 224 -----L---YKPRLAS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -----C---CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----C---CCCccCc----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 0011122 247889999999999999999999999999864
No 115
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-39 Score=362.52 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=205.6
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.+.|++.+.||+|+||.||+|..+ +++.||+|++... .......+.+|+.++++++||||+
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----------------~~~~~~~~~~E~~il~~l~hpnIv 111 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-----------------YPLDKYTVKNEISIMNQLHHPKLI 111 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------------SHHHHHHHHHHHHHHTTCCSTTBC
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc-----------------chhhHHHHHHHHHHHHhCCCcCCC
Confidence 3567889999999999999999974 6889999998432 123456789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECC--C
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDG--D 837 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~--~ 837 (1002)
++++++.+.+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++. +
T Consensus 112 ~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~ 187 (387)
T 1kob_A 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKA 187 (387)
T ss_dssp CEEEEEECSSEEEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTC
T ss_pred eEEEEEEeCCEEEEEEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCC
Confidence 999999999999999999999999999875 334699999999999999999999999 9999999999999974 4
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+.
T Consensus 188 ~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-~~~i~ 263 (387)
T 1kob_A 188 SSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQNVK 263 (387)
T ss_dssp CCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHH
T ss_pred CceEEEecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence 6799999999987754322 2345799999999999999999999999999999999999999976532222 22111
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
. . .. ....+....... ++.+++.+||+.||++|||++|+++
T Consensus 264 ~---~-~~-~~~~~~~~~~s~----~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 264 R---C-DW-EFDEDAFSSVSP----EAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp H---C-CC-CCCSSTTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred h---C-CC-CCCccccccCCH----HHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1 1 00 001111122222 4788999999999999999999986
No 116
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.5e-39 Score=370.46 Aligned_cols=258 Identities=23% Similarity=0.253 Sum_probs=206.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcC-CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSN-GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.++||+|+||+||+|+.++ ++.||+|++.+.. .......+.+.+|+.++..++||||++
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~--------------~~~~~~~~~~~~E~~il~~~~hp~Iv~ 138 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--------------MLKRAETACFREERDVLVNGDSKWITT 138 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH--------------HHHTTTTCCHHHHHHHHHHSCTTTBCC
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHH--------------hhhHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 4678999999999999999999754 7889999985421 112233445889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++.. ..+.+++..++.++.|++.||+|||++ +||||||||+|||++.++.+
T Consensus 139 l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~v 214 (437)
T 4aw2_A 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHI 214 (437)
T ss_dssp EEEEEECSSEEEEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEEeeCCEEEEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCE
Confidence 99999999999999999999999999975 245799999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY-----TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
||+|||+++....... ......+||+.|+|||++. ...++.++||||+||++|||++|+.||......+.+...
T Consensus 215 kL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i 293 (437)
T 4aw2_A 215 RLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293 (437)
T ss_dssp EECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred EEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh
Confidence 9999999987654332 2233467999999999987 456899999999999999999999999765433333222
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPIN--RPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~evl~ 967 (1002)
....... . +.+......+ .+.+++.+|+..+|++ ||+++|+++
T Consensus 294 ~~~~~~~-~----~p~~~~~~s~----~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 294 MNHKERF-Q----FPTQVTDVSE----NAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HTHHHHC-C----CCSSCCCSCH----HHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hhccccc-c----CCcccccCCH----HHHHHHHHHhcccccccCCCCHHHHhC
Confidence 2111111 1 1111122223 3778889999888888 999999985
No 117
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4e-39 Score=352.28 Aligned_cols=260 Identities=23% Similarity=0.374 Sum_probs=215.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcC-CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSN-GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|.+.. +..||+|++.. +....+.+.+|+.++++++||||++
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------------------~~~~~~~~~~E~~~l~~l~h~~i~~ 73 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------------------DTMEVEEFLKEAAVMKEIKHPNLVQ 73 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS------------------CSTHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc------------------CHHHHHHHHHHHHHHHhCCCCCEee
Confidence 3568888999999999999999754 88999999843 2234567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+++..++||||+++++|.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 74 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~ 150 (288)
T 3kfa_A 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 150 (288)
T ss_dssp EEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCE
Confidence 999999999999999999999999999876677899999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++........ .......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.... .......+...
T Consensus 151 ~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-~~~~~~~~~~~ 228 (288)
T 3kfa_A 151 KVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKD 228 (288)
T ss_dssp EECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGHHHHHHTT
T ss_pred EEccCccceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhcc
Confidence 9999999987654432 22334567889999999999999999999999999999999 888886543 33333333221
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
... +.....+ ..+.+++.+|++.||++|||++|+++.|+++....
T Consensus 229 ~~~--------~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 229 YRM--------ERPEGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CCC--------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCC--------CCCCCCC----HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 1112222 24788999999999999999999999999886543
No 118
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8.3e-39 Score=360.63 Aligned_cols=253 Identities=26% Similarity=0.313 Sum_probs=195.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~hpniv~ 80 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG------------------AAIDENVQREIINHRSLRHPNIVR 80 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS------------------TTSCHHHHHHHHHHHHCCCTTBCC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC------------------ccccHHHHHHHHHHHhCCCCCCCc
Confidence 467888999999999999999975 6899999998542 112356889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC-
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG- 839 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~- 839 (1002)
+++++.+.+..++||||+++|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~ 155 (361)
T 3uc3_A 81 FKEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAP 155 (361)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSC
T ss_pred EEEEEeeCCEEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCc
Confidence 999999999999999999999999999753 4699999999999999999999999 9999999999999987765
Q ss_pred -eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCc-cchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 840 -ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEK-SDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 840 -~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+||+|||+++...... ......||+.|+|||++.+..+..+ +||||+||++|+|++|+.||..............
T Consensus 156 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~ 232 (361)
T 3uc3_A 156 RLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ 232 (361)
T ss_dssp CEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHH
T ss_pred eEEEeecCccccccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence 9999999997543322 2234579999999999988877655 8999999999999999999987655555444443
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
....... . + +......+ .+.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~-~--~-~~~~~~s~----~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 233 RILSVKY-S--I-PDDIRISP----ECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHTTCC-C--C-CTTSCCCH----HHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhcCCC-C--C-CCcCCCCH----HHHHHHHHHccCChhHCcCHHHHHhC
Confidence 3322111 0 0 11111222 47789999999999999999999863
No 119
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.9e-39 Score=357.46 Aligned_cols=265 Identities=23% Similarity=0.338 Sum_probs=214.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE------cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-C
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL------SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-R 754 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 754 (1002)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+.+++++ +
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~ 89 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------------THSEHRALMSELKILIHIGH 89 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----------------CHHHHHHHHHHHHHHHHHCC
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC----------------CcHHHHHHHHHHHHHHhccc
Confidence 46788999999999999999984 246889999984321 233456789999999999 6
Q ss_pred CCceeeeeeEEecCC-eeeEEEeccCCCChhhhhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 001867 755 HKNIVKLWCCCTTRD-CKLLVYEYMPNGSLGDLLHSCKG--------------GLLDWPTRYKIIVDAAEGLSYLHHDCV 819 (1002)
Q Consensus 755 h~niv~l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~ 819 (1002)
||||+++++++...+ ..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++
T Consensus 90 hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-- 167 (316)
T 2xir_A 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-- 167 (316)
T ss_dssp CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC--
Confidence 999999999998654 58999999999999999986432 2389999999999999999999999
Q ss_pred CCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-
Q 001867 820 PSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT- 898 (1002)
Q Consensus 820 ~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~- 898 (1002)
+|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||+|+++|||++
T Consensus 168 -~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~ 246 (316)
T 2xir_A 168 -KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246 (316)
T ss_dssp -TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred -CcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999987765544334445568899999999999999999999999999999998
Q ss_pred CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhcc
Q 001867 899 GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 899 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 977 (1002)
|..||............+...... +......+ .+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 247 g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 247 GASPYPGVKIDEEFCRRLKEGTRM--------RAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp SCCSSTTCCCSHHHHHHHHHTCCC--------CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCcccchhHHHHHHhccCccC--------CCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 999997654444443333222111 01111222 47889999999999999999999999999876543
No 120
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=361.29 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=196.1
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC--Cceee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH--KNIVK 760 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~ 760 (1002)
+.|++.+.||+|+||.||+|...+++.||||++.... ......+.+.+|+.++++++| |||++
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~~~~~~iv~ 73 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---------------ADNQTLDSYRNEIAYLNKLQQHSDKIIR 73 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT---------------CCHHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc---------------cchHHHHHHHHHHHHHHhhhhcCCceEE
Confidence 4578889999999999999998889999999985321 134456779999999999986 99999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+++..|+|||+ .+++|.+++.. .+.+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+
T Consensus 74 ~~~~~~~~~~~~lv~e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~ 146 (343)
T 3dbq_A 74 LYDYEITDQYIYMVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML 146 (343)
T ss_dssp EEEEEECSSEEEEEECC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEE
T ss_pred EeeeEeeCCEEEEEEeC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcE
Confidence 99999999999999995 58899999985 45699999999999999999999999 999999999999997 6789
Q ss_pred EEccccCcccccCCCCCcccccccccccccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-----------LRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 147 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 226 (343)
T 3dbq_A 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226 (343)
T ss_dssp EECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred EEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence 9999999987765443333445679999999999865 67889999999999999999999999754332
Q ss_pred hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 910 KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.... ........ . ........ ..+.+++.+||+.||++|||++|+++.
T Consensus 227 ~~~~---~~~~~~~~-~----~~~~~~~~---~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 227 ISKL---HAIIDPNH-E----IEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHH---HHHHCTTS-C----CCCCCCSC---HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHH---HHHhcCCc-c----cCCcccCC---HHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 2211 11111110 0 01111111 247789999999999999999999854
No 121
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-38 Score=353.40 Aligned_cols=270 Identities=26% Similarity=0.343 Sum_probs=205.7
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC--CCCce
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI--RHKNI 758 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~ni 758 (1002)
+.++|++.+.||+|+||.||+|+.. ++.||||++.. .....+..|.+++... +||||
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--------------------~~~~~~~~e~~~~~~~~~~h~~i 93 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT--------------------TEEASWFRETEIYQTVLMRHENI 93 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEG--------------------GGHHHHHHHHHHHTSTTCCCTTB
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEec--------------------cccchhhhHHHHHHHHhhcCCCe
Confidence 4578999999999999999999986 89999999832 1233455566666655 89999
Q ss_pred eeeeeEEecC----CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeeCCCCC
Q 001867 759 VKLWCCCTTR----DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDC-----VPSIVHRDVKS 829 (1002)
Q Consensus 759 v~l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~iiHrDlk~ 829 (1002)
+++++++... ...++||||+++|+|.++++. ..+++..++.++.|++.||+|||++. .++|+||||||
T Consensus 94 ~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp 170 (337)
T 3mdy_A 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170 (337)
T ss_dssp CCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCG
T ss_pred eeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccch
Confidence 9999999877 788999999999999999975 35999999999999999999999751 23899999999
Q ss_pred CcEEECCCCCeEEccccCcccccCCCCCcc--cccccccccccCccccccCCCCCc------cchhhHHHHHHHHHhC--
Q 001867 830 NNILLDGDFGARVADFGVAKVVDASGKPKS--MSVIAGSCGYIAPEYAYTLRVNEK------SDIYSFGVVILELVTG-- 899 (1002)
Q Consensus 830 ~NIll~~~~~~kl~DfGl~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslGvil~ell~g-- 899 (1002)
+||+++.++.+||+|||+++.......... .....||+.|+|||++.+.....+ +|||||||++|||++|
T Consensus 171 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~ 250 (337)
T 3mdy_A 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCV 250 (337)
T ss_dssp GGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccC
Confidence 999999999999999999987654332211 124579999999999987776665 9999999999999999
Q ss_pred --------CCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Q 001867 900 --------RLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQE 971 (1002)
Q Consensus 900 --------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~ 971 (1002)
+.||.........................+.... ...+...++.+++.+||+.||++|||++|+++.|++
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 251 SGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRW--SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG--GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccc--hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 6676543332222222222222221111111111 112455678899999999999999999999999999
Q ss_pred hhhhc
Q 001867 972 VGAEN 976 (1002)
Q Consensus 972 ~~~~~ 976 (1002)
+....
T Consensus 329 l~~~~ 333 (337)
T 3mdy_A 329 MSESQ 333 (337)
T ss_dssp HHHTT
T ss_pred HHhhc
Confidence 87644
No 122
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-39 Score=362.23 Aligned_cols=261 Identities=26% Similarity=0.369 Sum_probs=196.6
Q ss_pred CCcCCeeeecCCccEEEEEEc--CC--cEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 685 LDEDNVIGSGSSGKVYKVVLS--NG--EAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 685 ~~~~~~LG~G~fg~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
|++.+.||+|+||.||+|... ++ ..||||.+... .+....+++.+|+.++++++||||++
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~~~E~~il~~l~hpnIv~ 154 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----------------TDIGEVSQFLTEGIIMKDFSHPNVLS 154 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC----------------SCSHHHHHHHHHHTTSTTCCCTTBCC
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC----------------CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 556789999999999999863 22 36899987431 13345678999999999999999999
Q ss_pred eeeEEec-CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 761 LWCCCTT-RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 761 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
+++++.. ++..++||||+++|+|.++++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 155 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 230 (373)
T 3c1x_A 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFT 230 (373)
T ss_dssp CCEEECCCSSCCEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred EEEEEEcCCCCeEEEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCC
Confidence 9998754 5678999999999999999975 345689999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCc--ccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPK--SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~ 916 (1002)
+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||... ...+....+
T Consensus 231 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~-~~~~~~~~~ 309 (373)
T 3c1x_A 231 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYL 309 (373)
T ss_dssp EEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-CSSCHHHHH
T ss_pred EEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC-CHHHHHHHH
Confidence 9999999998764432211 1234457789999999999999999999999999999999 55566543 333333332
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccc
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRS 978 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 978 (1002)
...... ......+. .+.+++.+||+.||++||+++|+++.|+++......
T Consensus 310 ~~~~~~--------~~p~~~~~----~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 310 LQGRRL--------LQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp HTTCCC--------CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred HcCCCC--------CCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 221110 01112222 478899999999999999999999999999765543
No 123
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=358.72 Aligned_cols=250 Identities=25% Similarity=0.343 Sum_probs=190.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.+.|++.+.||+|+||.||+|+.. +++.||||++... ...+.+.+|++++++++||||++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~-------------------~~~~~~~~E~~~l~~l~h~niv~ 112 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-------------------VDKKIVRTEIGVLLRLSHPNIIK 112 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------------------CHHHHHCCCTTBCC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc-------------------hhHHHHHHHHHHHHhCCCCCCcc
Confidence 456888899999999999999975 5789999998432 12356788999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECC---C
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDG---D 837 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~---~ 837 (1002)
+++++.+.+..++||||+++|+|.+++.. .+.+++..++.++.|++.||+|||++ +|+||||||+||+++. +
T Consensus 113 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~ 187 (349)
T 2w4o_A 113 LKEIFETPTEISLVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPD 187 (349)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTT
T ss_pred eeeeEecCCeEEEEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCC
Confidence 99999999999999999999999999974 45699999999999999999999999 9999999999999975 8
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............+.
T Consensus 188 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~ 264 (349)
T 2w4o_A 188 APLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL 264 (349)
T ss_dssp CCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHH
T ss_pred CCEEEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHH
Confidence 899999999998765432 22345799999999999999999999999999999999999999976544332222221
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. .. ....+....... ++.+++.+||+.||++|||++|+++
T Consensus 265 ~~----~~-~~~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 265 NC----EY-YFISPWWDEVSL----NAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TT----CC-CCCTTTTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hC----CC-ccCCchhhhCCH----HHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 11 111121222333 4788999999999999999999986
No 124
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.6e-39 Score=351.05 Aligned_cols=266 Identities=23% Similarity=0.277 Sum_probs=196.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccC---------CCccccccccchhhHHhHHHHHHHHh
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECES---------GCDVEKGQVQDQVQDDGFQAEVETLG 751 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~E~~~l~ 751 (1002)
.++|++.+.||+|+||.||+|.. .+++.||||++.......... ...............+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788899999999999999996 468899999996542110000 00000001112233567899999999
Q ss_pred cCCCCceeeeeeEEec--CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCC
Q 001867 752 KIRHKNIVKLWCCCTT--RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKS 829 (1002)
Q Consensus 752 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~ 829 (1002)
+++||||+++++++.+ .+..|+||||+++++|.+++. ...+++..++.++.|++.||+|||++ +|+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 9999999999999986 568899999999999988764 35799999999999999999999999 999999999
Q ss_pred CcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCC---CCCccchhhHHHHHHHHHhCCCCCCCC
Q 001867 830 NNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLR---VNEKSDIYSFGVVILELVTGRLPVDPE 906 (1002)
Q Consensus 830 ~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~ell~g~~p~~~~ 906 (1002)
+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 999999999999999999987654322 223457999999999988765 377899999999999999999999754
Q ss_pred CCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 907 FGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. ......+ ...... .+....... .+.+++.+||+.||++||+++|+++
T Consensus 244 ~~-~~~~~~~----~~~~~~---~~~~~~~~~----~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 RI-MCLHSKI----KSQALE---FPDQPDIAE----DLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SH-HHHHHHH----HHCCCC---CCSSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cH-HHHHHHH----hcccCC---CCCccccCH----HHHHHHHHHhhcChhhCCCHHHHhc
Confidence 22 1111111 111111 111122222 4788999999999999999999864
No 125
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-39 Score=361.94 Aligned_cols=262 Identities=24% Similarity=0.338 Sum_probs=199.3
Q ss_pred HHHhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 679 YEILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 679 ~~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
+++.+.|++.+.||+|+||.||+|.. .+|+.||||++... .......+++.+|+.++++++|||
T Consensus 21 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~hpn 85 (367)
T 1cm8_A 21 WEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP---------------FQSELFAKRAYRELRLLKHMRHEN 85 (367)
T ss_dssp ECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSST---------------TSSHHHHHHHHHHHHHHHHCCBTT
T ss_pred eeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcc---------------ccCHHHHHHHHHHHHHHHhCCCcC
Confidence 44567888999999999999999997 46899999998432 223445677899999999999999
Q ss_pred eeeeeeEEecCC------eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 001867 758 IVKLWCCCTTRD------CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNN 831 (1002)
Q Consensus 758 iv~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~N 831 (1002)
|+++++++...+ ..|+||||+ +++|.++++. ..+++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 86 Iv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~N 158 (367)
T 1cm8_A 86 VIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGN 158 (367)
T ss_dssp BCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred CCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHH
Confidence 999999998753 459999999 8899999975 4589999999999999999999999 99999999999
Q ss_pred EEECCCCCeEEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCch
Q 001867 832 ILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK 910 (1002)
Q Consensus 832 Ill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~ 910 (1002)
|+++.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+
T Consensus 159 Ill~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 233 (367)
T 1cm8_A 159 LAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233 (367)
T ss_dssp EEECTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEEcCCCCEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999999876432 234578999999999877 679999999999999999999999997654333
Q ss_pred hHHHHHHHHhhcc-----------------CccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 911 DLVKWVCSTLDQK-----------------GVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 911 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.+........... ....................+.+++.+|++.||++|||++|+++
T Consensus 234 ~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 234 QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 3222221110000 00000001111111112234788999999999999999999987
No 126
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.3e-39 Score=358.65 Aligned_cols=247 Identities=21% Similarity=0.284 Sum_probs=178.7
Q ss_pred CCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCceeeeeeEE
Q 001867 688 DNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIVKLWCCC 765 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 765 (1002)
.+.||+|+||.||+|..+ +++.||||++.+ .....+.+|+.+++++. ||||+++++++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~--------------------~~~~~~~~e~~~l~~l~~h~niv~~~~~~ 75 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK--------------------RMEANTQKEITALKLCEGHPNIVKLHEVF 75 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG--------------------GGHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh--------------------hhhhhHHHHHHHHHHhcCCCCeeEEEEEE
Confidence 478999999999999974 689999999832 23456789999999997 99999999999
Q ss_pred ecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC---CeEE
Q 001867 766 TTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF---GARV 842 (1002)
Q Consensus 766 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~---~~kl 842 (1002)
.+++..|+||||+++|+|.+++.. .+.+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 150 (325)
T 3kn6_A 76 HDQLHTFLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKI 150 (325)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEE
T ss_pred EcCCEEEEEEEccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEE
Confidence 999999999999999999999985 45699999999999999999999999 999999999999998765 7999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc---hhHHHHHHHH
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE---KDLVKWVCST 919 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~---~~~~~~~~~~ 919 (1002)
+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .........
T Consensus 151 ~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~- 227 (325)
T 3kn6_A 151 IDFGFARLKPPDNQ--PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK- 227 (325)
T ss_dssp CCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH-
T ss_pred eccccceecCCCCC--cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH-
Confidence 99999987654322 223456899999999999999999999999999999999999999754321 111122211
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
....... ...+...... .++.+++.+|++.||++|||++|+++
T Consensus 228 i~~~~~~-~~~~~~~~~s----~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 228 IKKGDFS-FEGEAWKNVS----QEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTTTCCC-CCSHHHHTSC----HHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHcCCCC-CCcccccCCC----HHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 1111110 0000111122 34788999999999999999998863
No 127
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.3e-39 Score=367.83 Aligned_cols=256 Identities=21% Similarity=0.258 Sum_probs=205.5
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.++||+|+||.||+|+.+ +++.||+|++.+.. .......+.+.+|+.+++.++||||++
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~--------------~~~~~~~~~~~~E~~il~~l~hp~Iv~ 133 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE--------------MIKRSDSAFFWEERDIMAFANSPWVVQ 133 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--------------HHHTCCCSTHHHHHHHHHHCCCTTBCC
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhh--------------hhhhHHHHHHHHHHHHHHhCCCCCCCe
Confidence 467889999999999999999975 58899999985421 112223455889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.++++. ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 134 l~~~~~~~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 207 (410)
T 3v8s_A 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHL 207 (410)
T ss_dssp EEEEEECSSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEEEECCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCE
Confidence 99999999999999999999999999974 3589999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCC----CCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLR----VNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
||+|||+++....... ......+||+.|+|||++.+.. ++.++||||+||++|||++|+.||........+..+.
T Consensus 208 kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 286 (410)
T 3v8s_A 208 KLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286 (410)
T ss_dssp EECCCTTCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred EEeccceeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHH
Confidence 9999999987654322 2233567999999999988665 7899999999999999999999997654333322222
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHH
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPIN--RPAMRRVVKL 968 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~evl~~ 968 (1002)
...... ..|....... .+.+++.+|++.+|++ ||+++||++.
T Consensus 287 ~~~~~~------~~p~~~~~s~----~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 287 NHKNSL------TFPDDNDISK----EAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp THHHHC------CCCTTCCCCH----HHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred hccccc------cCCCcccccH----HHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 211110 0111112222 3778899999999988 9999999853
No 128
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-38 Score=357.47 Aligned_cols=268 Identities=25% Similarity=0.310 Sum_probs=210.7
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhc--CCCCc
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGK--IRHKN 757 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~n 757 (1002)
.+.++|++.+.||+|+||.||+|+. +++.||||++.. .....+.+|+++++. ++|||
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~--------------------~~~~~~~~e~~~~~~~~l~h~n 97 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS--------------------REERSWFREAEIYQTVMLRHEN 97 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG--------------------GGHHHHHHHHHHHHHSCCCCTT
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc--------------------hhHHHHHHHHHHHHHhhcCCCc
Confidence 3467899999999999999999998 489999999832 234567788888887 68999
Q ss_pred eeeeeeEEecCC----eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeeeC
Q 001867 758 IVKLWCCCTTRD----CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLH--------HDCVPSIVHR 825 (1002)
Q Consensus 758 iv~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~iiHr 825 (1002)
|+++++++...+ ..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||
T Consensus 98 i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~ 171 (342)
T 1b6c_B 98 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHR 171 (342)
T ss_dssp BCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECS
T ss_pred EEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeC
Confidence 999999998876 78999999999999999975 35899999999999999999999 77 99999
Q ss_pred CCCCCcEEECCCCCeEEccccCcccccCCCCCc--ccccccccccccCccccccCC------CCCccchhhHHHHHHHHH
Q 001867 826 DVKSNNILLDGDFGARVADFGVAKVVDASGKPK--SMSVIAGSCGYIAPEYAYTLR------VNEKSDIYSFGVVILELV 897 (1002)
Q Consensus 826 Dlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslGvil~ell 897 (1002)
||||+||+++.++.+||+|||++.......... ......||+.|+|||++.+.. ++.++|||||||++|||+
T Consensus 172 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~ 251 (342)
T 1b6c_B 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251 (342)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHH
Confidence 999999999999999999999998776543221 123457999999999987653 336899999999999999
Q ss_pred hC----------CCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 898 TG----------RLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 898 ~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+| +.||.........................+.... ...+....+.+++.+||+.||++|||++||++
T Consensus 252 tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 252 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW--QSCEALRVMAKIMRECWYANGAARLTALRIKK 329 (342)
T ss_dssp TTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG--GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred hccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccc--cchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99 7788654332222222222221211111111111 12345567889999999999999999999999
Q ss_pred HHHHhhhhc
Q 001867 968 LLQEVGAEN 976 (1002)
Q Consensus 968 ~L~~~~~~~ 976 (1002)
.|+++....
T Consensus 330 ~L~~i~~~~ 338 (342)
T 1b6c_B 330 TLSQLSQQE 338 (342)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999987543
No 129
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.9e-39 Score=349.17 Aligned_cols=258 Identities=26% Similarity=0.446 Sum_probs=209.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|...+++.||||++... ....+.+.+|++++++++||||++++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~h~~i~~~~ 74 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------------------SMSPDAFLAEANLMKQLQHQRLVRLY 74 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT------------------SSCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC------------------cccHHHHHHHHHHHHhCCCcCcceEE
Confidence 567888999999999999999888889999998432 11246789999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++.. +..++||||+++++|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 75 ~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl 150 (279)
T 1qpc_A 75 AVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKI 150 (279)
T ss_dssp EEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEE
T ss_pred EEEcC-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEE
Confidence 99874 4589999999999999999754444699999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
+|||++........ .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+....+....
T Consensus 151 ~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~- 227 (279)
T 1qpc_A 151 ADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQNLERGY- 227 (279)
T ss_dssp CCCTTCEECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTTC-
T ss_pred CCCcccccccCccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-HHHHHHHhccc-
Confidence 99999987754322 12223456789999999998889999999999999999999 8999865432 22222222111
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
.. ......+ ..+.+++.+||+.||++|||++++++.|+++....
T Consensus 228 ----~~---~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 228 ----RM---VRPDNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp ----CC---CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----CC---CCccccc----HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 00 0111222 24788999999999999999999999999986543
No 130
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.1e-38 Score=355.49 Aligned_cols=282 Identities=26% Similarity=0.386 Sum_probs=217.5
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEE--EEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAV--AVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 758 (1002)
++|++.+.||+|+||.||+|+.. ++..+ |+|.+.... .....+.+.+|+++++++ +||||
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~hp~i 88 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----------------SKDDHRDFAGELEVLCKLGHHPNI 88 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------------------CHHHHHHHHHTTCCCCTTB
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc----------------chHHHHHHHHHHHHHHhccCCCch
Confidence 56888899999999999999964 56544 999874321 223456789999999999 89999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK--------------GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVH 824 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiH 824 (1002)
+++++++.+.+..|+||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+|
T Consensus 89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH 165 (327)
T 1fvr_A 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIH 165 (327)
T ss_dssp CCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred hhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccC
Confidence 999999999999999999999999999997532 24799999999999999999999999 9999
Q ss_pred CCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCC
Q 001867 825 RDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPV 903 (1002)
Q Consensus 825 rDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~ 903 (1002)
|||||+||+++.++.+||+|||+++...... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||
T Consensus 166 ~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf 242 (327)
T 1fvr_A 166 RDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242 (327)
T ss_dssp SCCSGGGEEECGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCCccceEEEcCCCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999997443221 1223457889999999998889999999999999999998 99999
Q ss_pred CCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccccCCCC
Q 001867 904 DPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKK 983 (1002)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~~~ 983 (1002)
..... .+.... ..... . .+...... ..+.+++.+||+.||++|||++|+++.|+++...........
T Consensus 243 ~~~~~-~~~~~~----~~~~~-~---~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~~ 309 (327)
T 1fvr_A 243 CGMTC-AELYEK----LPQGY-R---LEKPLNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTT 309 (327)
T ss_dssp TTCCH-HHHHHH----GGGTC-C---CCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBCCB
T ss_pred CCCcH-HHHHHH----hhcCC-C---CCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCccccc
Confidence 65432 222111 11110 0 01111222 247889999999999999999999999999987666555555
Q ss_pred CCCCCcchhhccccCC
Q 001867 984 DGKLSPYYHEDASDQG 999 (1002)
Q Consensus 984 ~~~~~~~~~~~~~~~~ 999 (1002)
......+...++..|.
T Consensus 310 ~~~~~~~~~~~~~~~~ 325 (327)
T 1fvr_A 310 LYEKFTYAGIDCSAEE 325 (327)
T ss_dssp CTTCCCCCCCCGGGC-
T ss_pred hhccCCcCCCCCCccc
Confidence 5555555555555553
No 131
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=362.71 Aligned_cols=263 Identities=17% Similarity=0.182 Sum_probs=209.0
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC---------CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN---------GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI 753 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 753 (1002)
++|++.+.||+|+||.||+|+... ++.||+|++.. .+.+.+|+++++++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~----------------------~~~~~~E~~~l~~l 99 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAK----------------------DGRLFNEQNFFQRA 99 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEET----------------------TSTHHHHHHHHHHH
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecc----------------------cchHHHHHHHHHHh
Confidence 578889999999999999999763 78999998832 14688999999999
Q ss_pred CCCceee---------------eeeEEec-CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 001867 754 RHKNIVK---------------LWCCCTT-RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHD 817 (1002)
Q Consensus 754 ~h~niv~---------------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 817 (1002)
+||||++ +++++.. .+..|+||||+ +++|.+++.......+++..++.++.|++.||+|||++
T Consensus 100 ~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 178 (352)
T 2jii_A 100 AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN 178 (352)
T ss_dssp CCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 9999988 6677765 77889999999 99999999875457799999999999999999999999
Q ss_pred CCCCeeeCCCCCCcEEECCCC--CeEEccccCcccccCCCCC-----cccccccccccccCccccccCCCCCccchhhHH
Q 001867 818 CVPSIVHRDVKSNNILLDGDF--GARVADFGVAKVVDASGKP-----KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFG 890 (1002)
Q Consensus 818 ~~~~iiHrDlk~~NIll~~~~--~~kl~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG 890 (1002)
+|+||||||+||+++.++ .+||+|||+++........ .......||+.|+|||++.+..++.++||||||
T Consensus 179 ---~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 255 (352)
T 2jii_A 179 ---EYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLG 255 (352)
T ss_dssp ---TCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred ---CccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHH
Confidence 999999999999999988 8999999999876543221 112344799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC-CchhHHHHHHHHhhccCccccccccc--cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 891 VVILELVTGRLPVDPEF-GEKDLVKWVCSTLDQKGVDHVLDPKL--DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 891 vil~ell~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
|++|||++|+.||.... ........... .... .....++.. ...+. .+.+++.+||+.||++||+++++++
T Consensus 256 ~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 256 YCMLKWLYGFLPWTNCLPNTEDIMKQKQK-FVDK-PGPFVGPCGHWIRPSE----TLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp HHHHHHHHSCCTTGGGTTCHHHHHHHHHH-HHHS-CCCEECTTSCEECCCH----HHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHhCCCCcccCCcCHHHHHHHHHh-ccCC-hhhhhhhccccCCCcH----HHHHHHHHHHhCChhhCCCHHHHHH
Confidence 99999999999997654 22222222221 1111 111111111 12222 4788999999999999999999999
Q ss_pred HHHHhhhhcc
Q 001867 968 LLQEVGAENR 977 (1002)
Q Consensus 968 ~L~~~~~~~~ 977 (1002)
.|+++.....
T Consensus 330 ~L~~~~~~~~ 339 (352)
T 2jii_A 330 NLEALLQDLR 339 (352)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9999976543
No 132
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.3e-39 Score=357.40 Aligned_cols=250 Identities=25% Similarity=0.327 Sum_probs=199.8
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCceee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIVK 760 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 760 (1002)
++|++.+.||+|+||.||+|+.+ +++.||+|++.+.. .......+.+.+|+.+++++ +||||++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~~~~hp~iv~ 74 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL--------------VNDDEDIDWVQTEKHVFEQASNHPFLVG 74 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGG--------------SCSHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHH--------------hcchHHHHHHHHHHHHHHhcCCCCccCe
Confidence 56788899999999999999975 58899999985431 22344566788999999988 8999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 75 l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~ 149 (345)
T 3a8x_A 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 149 (345)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred EEEEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 999999999999999999999999999753 4699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCch----hHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK----DLVKWV 916 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~----~~~~~~ 916 (1002)
||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......
T Consensus 150 kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 227 (345)
T 3a8x_A 150 KLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227 (345)
T ss_dssp EECCGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH
T ss_pred EEEeccccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH
Confidence 999999998643322 12345679999999999999999999999999999999999999996422111 111111
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAM 962 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 962 (1002)
.......... +. .... .++.+++.+||+.||++||++
T Consensus 228 ~~~i~~~~~~--~p---~~~s----~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 228 FQVILEKQIR--IP---RSLS----VKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHHCCCC--CC---TTSC----HHHHHHHHHHTCSSTTTSTTC
T ss_pred HHHHHcCCCC--CC---CCCC----HHHHHHHHHHhcCCHhHCCCC
Confidence 1111111111 01 1122 247789999999999999995
No 133
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=348.78 Aligned_cols=261 Identities=25% Similarity=0.329 Sum_probs=209.9
Q ss_pred CCCcCCeeeecCCccEEEEEEcC-C---cEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 684 GLDEDNVIGSGSSGKVYKVVLSN-G---EAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 684 ~~~~~~~LG~G~fg~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
.|+..++||+|+||.||+|...+ + ..||+|++... ......+.+.+|+.++++++||||+
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~~iv 85 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI----------------TEMQQVEAFLREGLLMRGLNHPNVL 85 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC----------------CSHHHHHHHHHHHHHHHTCCCTTBC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc----------------ccHHHHHHHHHHHHHHHhCCCCCee
Confidence 34566899999999999998532 2 37999988431 1334567899999999999999999
Q ss_pred eeeeEEecCCee-eEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 760 KLWCCCTTRDCK-LLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 760 ~l~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
++++++.+.+.. ++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 86 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~ 161 (298)
T 3pls_A 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESF 161 (298)
T ss_dssp CCCEEECCSSSCCEEEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTC
T ss_pred eEEEEEecCCCCcEEEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence 999999876655 999999999999999975 346789999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCC--CCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 839 GARVADFGVAKVVDASG--KPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
.+||+|||+++...... .........+|+.|+|||.+.+..++.++||||+|+++|+|++|+.|+.......+.....
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~ 241 (298)
T 3pls_A 162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL 241 (298)
T ss_dssp CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH
T ss_pred cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh
Confidence 99999999998654432 1122234567889999999999999999999999999999999777766555555554444
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
....... .....+ ..+.+++.+||+.||++|||++++++.|+++....
T Consensus 242 ~~~~~~~--------~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 242 AQGRRLP--------QPEYCP----DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp HTTCCCC--------CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hcCCCCC--------CCccch----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 3222111 111122 24788999999999999999999999999987654
No 134
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-38 Score=370.09 Aligned_cols=250 Identities=27% Similarity=0.411 Sum_probs=205.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.+.. .......+.+.+|+.+++.++||||++
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~--------------~~~~~~~~~~~~Ei~~l~~l~HpnIv~ 80 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK--------------IRSLDVVGKIRREIQNLKLFRHPHIIK 80 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHH--------------HHHTTTHHHHHHHHHHHTTCCCTTBCC
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh--------------ccCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 357888899999999999999975 68999999985421 112223567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++.. .+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 81 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~v 155 (476)
T 2y94_A 81 LYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNA 155 (476)
T ss_dssp EEEEEECSSEEEEEEECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEEEECCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCe
Confidence 99999999999999999999999999973 45699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++........ ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||....... ....+...
T Consensus 156 kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~ 231 (476)
T 2y94_A 156 KIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDG 231 (476)
T ss_dssp EECCCSSCEECCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH-HHHHHHTT
T ss_pred EEEeccchhhcccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH-HHHHHhcC
Confidence 9999999987654322 234579999999999988765 689999999999999999999997653322 22222111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
... ......+ .+.+++.+||+.||++|||++|+++
T Consensus 232 ----~~~-----~p~~~s~----~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 232 ----IFY-----TPQYLNP----SVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----CCC-----CCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CcC-----CCccCCH----HHHHHHHHHcCCCchhCcCHHHHHh
Confidence 100 0111222 4778999999999999999999996
No 135
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-40 Score=366.66 Aligned_cols=266 Identities=25% Similarity=0.311 Sum_probs=190.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhc--CCCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGK--IRHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv 759 (1002)
.++|.+.+.||+|+||.||+|+.. ++.||||++.. .....+.+|.+++.. ++||||+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--------------------~~~~~~~~e~~~~~~~~~~h~~i~ 60 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS--------------------REERSWFREAEIYQTVMLRHENIL 60 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC---------------------TTHHHHHHHHHHHTSTTCCC-CBC
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecc--------------------cchhhHHHHHHHHHHHhccCccee
Confidence 357899999999999999999875 89999999732 224557778888888 6899999
Q ss_pred eeeeEEecCC----eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeeeCCC
Q 001867 760 KLWCCCTTRD----CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLH--------HDCVPSIVHRDV 827 (1002)
Q Consensus 760 ~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~iiHrDl 827 (1002)
++++++.... ..++||||+++|+|.++++. ..+++..++.++.|++.||+||| +. +|+||||
T Consensus 61 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dl 134 (303)
T 3gxj_A 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDL 134 (303)
T ss_dssp CEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCC
T ss_pred eeeeecccCCCccceeEEEEeccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcC
Confidence 9999998776 78999999999999999964 35888999999999999999999 77 9999999
Q ss_pred CCCcEEECCCCCeEEccccCcccccCCCCCc--ccccccccccccCccccccC------CCCCccchhhHHHHHHHHHhC
Q 001867 828 KSNNILLDGDFGARVADFGVAKVVDASGKPK--SMSVIAGSCGYIAPEYAYTL------RVNEKSDIYSFGVVILELVTG 899 (1002)
Q Consensus 828 k~~NIll~~~~~~kl~DfGl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~ell~g 899 (1002)
||+||+++.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 135 kp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 135 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp CGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred CHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 9999999999999999999998765543321 12334799999999998766 344689999999999999999
Q ss_pred ----------CCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 001867 900 ----------RLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLL 969 (1002)
Q Consensus 900 ----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 969 (1002)
+.||.........................+.+.. ...+....+.+++.+||+.||++|||++|+++.|
T Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 292 (303)
T 3gxj_A 215 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW--QSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp BCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGG--GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred CCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccc--cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 6777543221111111111111111111111111 1224556789999999999999999999999999
Q ss_pred HHhhhhc
Q 001867 970 QEVGAEN 976 (1002)
Q Consensus 970 ~~~~~~~ 976 (1002)
+++....
T Consensus 293 ~~l~~~~ 299 (303)
T 3gxj_A 293 SQLSQQE 299 (303)
T ss_dssp HC-CCC-
T ss_pred HHhhhhc
Confidence 9886543
No 136
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.1e-39 Score=360.56 Aligned_cols=250 Identities=25% Similarity=0.373 Sum_probs=202.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.+.. .......+.+..|..+++.+ +||||+
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~E~~il~~~~~hp~iv 81 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV--------------VLMDDDVECTMVEKRVLSLAWEHPFLT 81 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHHHHTTCTTBC
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHH--------------hhhhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 467888999999999999999975 58899999985431 11123355678899999876 899999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..|+||||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 82 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~ 156 (345)
T 1xjd_A 82 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGH 156 (345)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred cEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCC
Confidence 9999999999999999999999999999853 4699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+....+..
T Consensus 157 vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~- 232 (345)
T 1xjd_A 157 IKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIRM- 232 (345)
T ss_dssp EEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH-
T ss_pred EEEeEChhhhhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHh-
Confidence 9999999998643322 123456799999999999999999999999999999999999999975432 222222111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHH-HHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMR-RVV 966 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-evl 966 (1002)
. ... + + .... ..+.+++.+||+.||++||++. ++.
T Consensus 233 --~-~~~--~-p--~~~s----~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 233 --D-NPF--Y-P--RWLE----KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp --C-CCC--C-C--TTSC----HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred --C-CCC--C-C--cccC----HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1 100 0 1 1122 2477899999999999999997 654
No 137
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=368.00 Aligned_cols=256 Identities=23% Similarity=0.264 Sum_probs=204.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+.+ +++.||||++.+. ........+.+.+|+.++.+++||||++
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~--------------~~~~~~~~~~~~~E~~il~~~~hp~Iv~ 125 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW--------------DMLKRGEVSCFREERDVLVNGDRRWITQ 125 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHH--------------HHHHHGGGCCHHHHHHHHHHSCTTTBCC
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHH--------------HhhhHHHHHHHHHHHHHHHhcCCCCeee
Confidence 467889999999999999999974 6899999998542 1112334556889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++|+|.+++... +..+++..++.++.||+.||+|||++ +|+||||||+||+++.++++
T Consensus 126 l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~v 201 (412)
T 2vd5_A 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHI 201 (412)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEEeeCCEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCE
Confidence 999999999999999999999999999753 34699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccc-------cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY-------TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV 913 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~ 913 (1002)
||+|||+++....... ......+||+.|+|||++. +..++.++||||+||++|||++|+.||........+.
T Consensus 202 kL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~ 280 (412)
T 2vd5_A 202 RLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280 (412)
T ss_dssp EECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred EEeechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999987654432 2223457999999999987 3568999999999999999999999997654333322
Q ss_pred HHHHHHhhccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCC---CCHHHHHH
Q 001867 914 KWVCSTLDQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINR---PAMRRVVK 967 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~R---ps~~evl~ 967 (1002)
+........ . .|.. ..... ++.+++.+|+. +|++| |+++|+++
T Consensus 281 ~i~~~~~~~-~-----~p~~~~~~s~----~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 281 KIVHYKEHL-S-----LPLVDEGVPE----EARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHTHHHHC-C-----CC----CCCH----HHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHhcccCc-C-----CCccccCCCH----HHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 222111110 0 0111 11222 47789999999 99998 58998874
No 138
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.6e-38 Score=349.26 Aligned_cols=262 Identities=26% Similarity=0.353 Sum_probs=205.4
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC----CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN----GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
..|++.+.||+|+||.||+|...+ ...||+|.+... ......+.+.+|+.++++++||||
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~~i 88 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----------------TDIGEVSQFLTEGIIMKDFSHPNV 88 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC----------------CSHHHHHHHHHHHHHHHTCCCTTB
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC----------------CCHHHHHHHHHHHHHHHhCCCCCE
Confidence 357778999999999999998643 235899987431 234456779999999999999999
Q ss_pred eeeeeEEe-cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 759 VKLWCCCT-TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 759 v~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
+++++++. .++..++||||+++|+|.++++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~ 164 (298)
T 3f66_A 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 164 (298)
T ss_dssp CCCCEEECCSSSCCEEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred eeeeeEEEcCCCceEEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCC
Confidence 99999864 55678999999999999999975 346689999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCC--cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 838 FGARVADFGVAKVVDASGKP--KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
+.+||+|||+++........ .......||+.|+|||.+.+..++.++||||+|+++|||++|+.|+.......+....
T Consensus 165 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~ 244 (298)
T 3f66_A 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 244 (298)
T ss_dssp CCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHH
T ss_pred CCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence 99999999999876543211 1223446788999999999999999999999999999999965554444344443333
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
....... ......+ ..+.+++.+||+.||++|||++|+++.|+++....
T Consensus 245 ~~~~~~~--------~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 245 LLQGRRL--------LQPEYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp HHTTCCC--------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred HhcCCCC--------CCCccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 3221111 0011122 24788999999999999999999999999987644
No 139
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=357.21 Aligned_cols=258 Identities=24% Similarity=0.356 Sum_probs=199.5
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcE----EEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEA----VAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
++|++.+.||+|+||.||+|.+. +++. ||+|.+... ......+.+.+|+.++++++|||
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~----------------~~~~~~~~~~~E~~~l~~l~hp~ 78 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----------------TSPKANKEILDEAYVMASVDNPH 78 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC----------------SSCCCHHHHHHHHHHHTTCCBTT
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc----------------cCHHHHHHHHHHHHHHHhCCCCC
Confidence 56888899999999999999964 4554 466655321 12234567899999999999999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
|+++++++.... .++|+||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 79 iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~ 153 (327)
T 3lzb_A 79 VCRLLGICLTST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTP 153 (327)
T ss_dssp BCCCCEEEESSS-EEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEET
T ss_pred eeEEEEEEecCC-ceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCC
Confidence 999999998765 78999999999999999863 45699999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~ 916 (1002)
+.+||+|||+++...............||+.|+|||++.+..++.++||||+||++|||++ |+.||.... .......+
T Consensus 154 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-~~~~~~~~ 232 (327)
T 3lzb_A 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEISSIL 232 (327)
T ss_dssp TEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-GGGHHHHH
T ss_pred CCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHH
Confidence 9999999999988765544444445567889999999999999999999999999999999 999997543 33333333
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
...... +....... .+.+++.+||+.||++||+++|+++.|+++..
T Consensus 233 ~~~~~~--------~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 233 EKGERL--------PQPPICTI----DVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HTTCCC--------CCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred HcCCCC--------CCCccCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 221110 11112222 47889999999999999999999999999864
No 140
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9e-39 Score=364.13 Aligned_cols=253 Identities=21% Similarity=0.297 Sum_probs=197.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC--CCceee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR--HKNIVK 760 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~ 760 (1002)
+.|++.+.||+|+||.||+|...+++.||||++.... .+....+.+.+|+.++++++ ||||++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~Ei~~l~~l~~~~~~iv~ 120 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---------------ADNQTLDSYRNEIAYLNKLQQHSDKIIR 120 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT---------------CCHHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc---------------ccHHHHHHHHHHHHHHHHcccCCCeEEE
Confidence 3588899999999999999998889999999985421 13445678999999999996 599999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++..++..|+|||+ .+++|.+++... ..+++..++.++.||+.||+|||++ +|+||||||+||+++ ++.+
T Consensus 121 ~~~~~~~~~~~~lv~E~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~ 193 (390)
T 2zmd_A 121 LYDYEITDQYIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML 193 (390)
T ss_dssp EEEEEECSSEEEEEEEC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCE
T ss_pred EEEEEecCCEEEEEEec-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeE
Confidence 99999999999999995 588999999853 4689999999999999999999999 999999999999996 5899
Q ss_pred EEccccCcccccCCCCCcccccccccccccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-----------LRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
||+|||+++..............+||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 194 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 273 (390)
T 2zmd_A 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273 (390)
T ss_dssp EECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH
T ss_pred EEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH
Confidence 9999999987755433333345679999999999865 36889999999999999999999999754332
Q ss_pred hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 910 KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
..... ...... .. ...+... ...+.+++.+||+.||++||+++|+++.
T Consensus 274 ~~~~~---~~~~~~-~~----~~~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 ISKLH---AIIDPN-HE----IEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHH---HHHCTT-SC----CCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHH---HHhCcc-cc----CCCCccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 22111 111111 00 0111111 1247789999999999999999999853
No 141
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.4e-38 Score=343.79 Aligned_cols=254 Identities=24% Similarity=0.326 Sum_probs=205.8
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
..++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~ 68 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----------------AVDCPENIKKEICINKMLNHENVV 68 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG----------------CTTHHHHHHHHHHHHHTCCCTTBC
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc----------------chhhhHHHHHHHHHHHhcCCCCce
Confidence 3567888999999999999999975 68999999984321 123456789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..++||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 69 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~ 143 (276)
T 2yex_A 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDN 143 (276)
T ss_dssp CEEEEEEETTEEEEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred eeeeEEEcCCEEEEEEEecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCC
Confidence 999999999999999999999999999973 45699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchh-HHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKD-LVKWVC 917 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~-~~~~~~ 917 (1002)
+||+|||.+................||+.|+|||++.+..+ +.++||||+|+++|||++|+.||........ ...+..
T Consensus 144 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 223 (276)
T 2yex_A 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223 (276)
T ss_dssp EEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT
T ss_pred EEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh
Confidence 99999999987654333233345678999999999987765 6799999999999999999999976543322 222211
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
. . .. .+....... .+.+++.+||+.||++|||++|+++
T Consensus 224 ~-~----~~---~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 224 K-K----TY---LNPWKKIDS----APLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp T-C----TT---STTGGGSCH----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c-c----cc---cCchhhcCH----HHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1 0 00 011112222 4778999999999999999999874
No 142
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1e-38 Score=357.43 Aligned_cols=251 Identities=26% Similarity=0.348 Sum_probs=202.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcC-CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSN-GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.+.||+|+||.||+|+.+. ++.||||++.+.. .......+.+..|..++..+ +||+|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~~~~hp~iv 84 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV--------------VIQDDDVECTMVEKRVLALPGKPPFLT 84 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHTCTTCCTTBC
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhcchHHHHHHHHHHHHHhcCCCCEEe
Confidence 4678889999999999999999754 7889999985431 11223456788999999988 799999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..|+||||+++|+|.+++... +.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 85 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ 159 (353)
T 2i0e_A 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 159 (353)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred eEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCc
Confidence 9999999999999999999999999999853 4599999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+....+.
T Consensus 160 vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~-- 234 (353)
T 2i0e_A 160 IKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIM-- 234 (353)
T ss_dssp EEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH--
T ss_pred EEEEeCCcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-HHHHHHHH--
Confidence 9999999998643322 123456799999999999999999999999999999999999999975432 22222211
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPA-----MRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~ 967 (1002)
.. ... + | .... .++.+++.+|++.||++||+ ++|+++
T Consensus 235 -~~-~~~--~-p--~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 235 -EH-NVA--Y-P--KSMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -HC-CCC--C-C--TTSC----HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -hC-CCC--C-C--CCCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11 110 0 0 1122 24778999999999999995 567664
No 143
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=353.40 Aligned_cols=266 Identities=23% Similarity=0.242 Sum_probs=202.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC---CCc
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR---HKN 757 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~n 757 (1002)
.++|++.+.||+|+||+||+|+. .+++.||||++...... .........+.+|+.++++++ |||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~~~~~e~~~l~~l~~~~h~n 75 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGG------------GGGGGLPISTVREVALLRRLEAFEHPN 75 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCC------------TTSSCCCHHHHHHHHHHHHHHHHCCTT
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccc------------ccccccchhHHHHHHHHHHHhhcCCCC
Confidence 46899999999999999999996 56899999998543211 011112345667777777764 999
Q ss_pred eeeeeeEEecCC-----eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 001867 758 IVKLWCCCTTRD-----CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNI 832 (1002)
Q Consensus 758 iv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NI 832 (1002)
|+++++++.... ..++||||++ |+|.+++.......+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 76 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Ni 151 (308)
T 3g33_A 76 VVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENI 151 (308)
T ss_dssp BCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTE
T ss_pred eEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHE
Confidence 999999998755 5799999995 6999999876666699999999999999999999999 999999999999
Q ss_pred EECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhH
Q 001867 833 LLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDL 912 (1002)
Q Consensus 833 ll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~ 912 (1002)
+++.++.+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 152 l~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 228 (308)
T 3g33_A 152 LVTSGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 228 (308)
T ss_dssp EECTTSCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH
T ss_pred EEcCCCCEEEeeCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999999999987654322 23457899999999999999999999999999999999999999765443333
Q ss_pred HHHHHHHhhccCccc----------cccccc----cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 913 VKWVCSTLDQKGVDH----------VLDPKL----DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
........ ...... .+.+.. ....++....+.+++.+|++.||++|||++|+++
T Consensus 229 ~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 229 GKIFDLIG-LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHHHC-CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhC-CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 33322211 100000 000000 0000111235788999999999999999999874
No 144
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.6e-38 Score=357.31 Aligned_cols=258 Identities=20% Similarity=0.256 Sum_probs=204.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.+.|++.+.||+|+||.||+|..+ +++.||||++...... .......+.+.+|+.++++++||||++
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~~~~~E~~~l~~l~hpnIv~ 90 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT------------SSPGLSTEDLKREASICHMLKHPHIVE 90 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH------------TSSSCCHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcc------------ccccchHHHHHHHHHHHHhCCCCCCCc
Confidence 457888999999999999999964 6899999998542110 011123567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSC--KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
+++++.+.+..|+||||+++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 91 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~ 167 (351)
T 3c0i_A 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKE 167 (351)
T ss_dssp EEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSS
T ss_pred EEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCC
Confidence 999999999999999999999998887643 234689999999999999999999999 999999999999998665
Q ss_pred C---eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 839 G---ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 839 ~---~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
. +||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||... .......
T Consensus 168 ~~~~vkl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~ 243 (351)
T 3c0i_A 168 NSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT--KERLFEG 243 (351)
T ss_dssp TTCCEEECCCTTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS--HHHHHHH
T ss_pred CCCcEEEecCcceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc--HHHHHHH
Confidence 4 99999999987765322 223457999999999999999999999999999999999999999753 1222111
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+.. ..... ..+...... ..+.+++.+||+.||++|||+.|+++
T Consensus 244 i~~----~~~~~-~~~~~~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 244 IIK----GKYKM-NPRQWSHIS----ESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHH----TCCCC-CHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHc----CCCCC-CccccccCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111 11100 000111222 24788999999999999999999985
No 145
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7e-39 Score=358.01 Aligned_cols=252 Identities=20% Similarity=0.323 Sum_probs=197.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|+.++++++||||++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~hpniv~ 68 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN----------------RELAREKVMREVKALAKLEHPGIVR 68 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS----------------TTTHHHHHHHHHHHHTSCCCTTBCC
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC----------------chhHHHHHHHHHHHHHhCCCCCEee
Confidence 467888999999999999999975 78999999985321 2334677999999999999999999
Q ss_pred eeeEEecCC---------------------------------------------------------eeeEEEeccCCCCh
Q 001867 761 LWCCCTTRD---------------------------------------------------------CKLLVYEYMPNGSL 783 (1002)
Q Consensus 761 l~~~~~~~~---------------------------------------------------------~~~lv~e~~~~g~L 783 (1002)
+++++.+.. ..++||||+++|+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L 148 (332)
T 3qd2_B 69 YFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENL 148 (332)
T ss_dssp EEEEEEECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCH
T ss_pred EEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCH
Confidence 999986543 37999999999999
Q ss_pred hhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCC-----
Q 001867 784 GDLLHSCKG-GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKP----- 857 (1002)
Q Consensus 784 ~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~----- 857 (1002)
.+++..... ...++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~ 225 (332)
T 3qd2_B 149 KDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225 (332)
T ss_dssp HHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------
T ss_pred HHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccc
Confidence 999986432 4467778999999999999999999 9999999999999999999999999999887654321
Q ss_pred -----cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhccCcccccccc
Q 001867 858 -----KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPK 932 (1002)
Q Consensus 858 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
.......||+.|+|||++.+..++.++||||+||++|||++|..|+. +....... .....
T Consensus 226 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~------~~~~~~~~-~~~~~-------- 290 (332)
T 3qd2_B 226 PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM------ERVRIITD-VRNLK-------- 290 (332)
T ss_dssp ------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH------HHHHHHHH-HHTTC--------
T ss_pred cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh------HHHHHHHH-hhccC--------
Confidence 12234579999999999999999999999999999999999876642 11111111 11111
Q ss_pred ccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 933 LDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 933 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...........+.+++.+||+.||++|||++|+++
T Consensus 291 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 291 FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 11111222345678999999999999999999985
No 146
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=359.56 Aligned_cols=251 Identities=21% Similarity=0.285 Sum_probs=199.2
Q ss_pred CCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeeeeEEe
Q 001867 688 DNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLWCCCT 766 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 766 (1002)
.+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~-----------------~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 156 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTR-----------------GMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECC-----------------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccc-----------------ccccHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 56899999999999996 46899999998432 2234567999999999999999999999999
Q ss_pred cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE--CCCCCeEEcc
Q 001867 767 TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL--DGDFGARVAD 844 (1002)
Q Consensus 767 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll--~~~~~~kl~D 844 (1002)
+.+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 157 ~~~~~~lv~E~~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~D 232 (373)
T 2x4f_A 157 SKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIID 232 (373)
T ss_dssp CSSEEEEEEECCTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECC
T ss_pred ECCEEEEEEeCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEe
Confidence 99999999999999999998875 334689999999999999999999999 99999999999999 5677899999
Q ss_pred ccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhccC
Q 001867 845 FGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKG 924 (1002)
Q Consensus 845 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 924 (1002)
||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.....
T Consensus 233 FG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~---- 305 (373)
T 2x4f_A 233 FGLARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW---- 305 (373)
T ss_dssp CSSCEECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC----
T ss_pred CCCceecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC----
Confidence 999987754432 2344699999999999988899999999999999999999999976543332222222111
Q ss_pred ccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH--HHHHh
Q 001867 925 VDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK--LLQEV 972 (1002)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~--~L~~~ 972 (1002)
....+....... .+.+++.+|++.||++|||++|+++ ++.+.
T Consensus 306 --~~~~~~~~~~~~----~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 306 --DLEDEEFQDISE----EAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp --CSCSGGGTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred --CCChhhhccCCH----HHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 011111122233 4788999999999999999999997 56554
No 147
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.1e-38 Score=349.95 Aligned_cols=261 Identities=21% Similarity=0.273 Sum_probs=190.1
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|..+ +++.||+|++.... .....+.+.+|+.++++++||||++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~hp~iv~ 67 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS----------------EEGTPSTAIREISLMKELKHENIVR 67 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS----------------TTCSCHHHHHHHHHHTTCCBTTBCC
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc----------------ccccHHHHHHHHHHHHhcCCCCcce
Confidence 357888999999999999999964 68999999985421 1122356889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECC
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK----GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDG 836 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~ 836 (1002)
+++++.+++..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 68 ~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~ 143 (317)
T 2pmi_A 68 LYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINK 143 (317)
T ss_dssp EEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECT
T ss_pred EEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcC
Confidence 9999999999999999997 69999987532 24689999999999999999999999 9999999999999999
Q ss_pred CCCeEEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 837 DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 837 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
++.+||+|||+++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||............
T Consensus 144 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i 221 (317)
T 2pmi_A 144 RGQLKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221 (317)
T ss_dssp TCCEEECCCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CCCEEECcCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 99999999999987654322 2234578999999999876 46899999999999999999999999765443333222
Q ss_pred HHHHhhcc--C---------cc------------ccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQK--G---------VD------------HVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~--~---------~~------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
........ . .. ..+.+...... ..++.+++.+|++.||++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 222 FDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL---DGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp HHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCC---CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccC---CHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 22111000 0 00 00000011111 125789999999999999999999875
No 148
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-38 Score=354.12 Aligned_cols=252 Identities=24% Similarity=0.318 Sum_probs=193.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEE----cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL----SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
.++|++.+.||+|+||.||+|+. .+++.||+|++.+.... ........+.+|+.++++++|||
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~-------------~~~~~~~~~~~E~~~l~~l~hp~ 82 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV-------------RNAKDTAHTKAERNILEEVKHPF 82 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------------------HHHHHHHCCCTT
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhh-------------hhhhHHHHHHHHHHHHHhCCCCC
Confidence 35688889999999999999997 46899999998543110 12233556789999999999999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
|+++++++...+..|+||||+++|+|.+++.. .+.+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 83 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQ 157 (327)
T ss_dssp BCCEEEEEECSSCEEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTT
T ss_pred ccceeEEEEcCCEEEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCC
Confidence 99999999999999999999999999999975 34689999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+.+||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..............
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 235 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235 (327)
T ss_dssp SCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred CcEEEEeCCcccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 9999999999976443221 22345799999999999999999999999999999999999999976532222211111
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-----AMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~ 967 (1002)
. ... +. .... ..+.+++.+||+.||++|| +++|+++
T Consensus 236 ----~-~~~--~p---~~~~----~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 236 ----C-KLN--LP---PYLT----QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ----T-CCC--CC---TTSC----HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ----C-CCC--CC---CCCC----HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1 000 01 1122 2477899999999999999 7778765
No 149
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.3e-38 Score=373.64 Aligned_cols=255 Identities=22% Similarity=0.273 Sum_probs=207.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||.||+|+.+ +|+.||||++.+.. .......+.+.+|+.++++++||||+++
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~--------------~~~~~~~~~~~~E~~iL~~l~hp~Iv~l 249 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR--------------IKKRKGEAMALNEKQILEKVNSRFVVSL 249 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHh--------------hhhhHHHHHHHHHHHHHHHcCCCCEeeE
Confidence 56778899999999999999974 68999999985421 1123345678899999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+.+..|+||||++||+|.+++.......+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 250 ~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vK 326 (576)
T 2acx_A 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIR 326 (576)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeE
Confidence 99999999999999999999999999865556699999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
|+|||+++....... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||.................
T Consensus 327 L~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~- 402 (576)
T 2acx_A 327 ISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK- 402 (576)
T ss_dssp ECCCTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH-
T ss_pred EEecccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh-
Confidence 999999987654322 2345799999999999998999999999999999999999999976543222222211111
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-----AMRRVVK 967 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~ 967 (1002)
..... +. .... ..+.+++.+|++.||++|| +++|+++
T Consensus 403 ~~~~~--~p---~~~s----~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 403 EVPEE--YS---ERFS----PQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HCCCC--CC---TTSC----HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccccc--CC---ccCC----HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11100 00 1122 2477899999999999999 7888874
No 150
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6.9e-39 Score=350.59 Aligned_cols=251 Identities=20% Similarity=0.342 Sum_probs=202.8
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC-C-------cEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN-G-------EAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR 754 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 754 (1002)
++|.+.+.||+|+||.||+|.... + ..||+|++... .....+.+.+|+.++++++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-----------------~~~~~~~~~~E~~~l~~l~ 70 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-----------------HRNYSESFFEAASMMSKLS 70 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-----------------GGGGHHHHHHHHHHHHTSC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc-----------------cHHHHHHHHHHHHHHHhCC
Confidence 467788999999999999998643 3 47999988432 2334567999999999999
Q ss_pred CCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 755 HKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 755 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
||||+++++++.+++..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 71 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 146 (289)
T 4fvq_A 71 HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILL 146 (289)
T ss_dssp CTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred CCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEE
Confidence 999999999999999999999999999999999863 34599999999999999999999999 99999999999999
Q ss_pred CCCCC--------eEEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCC
Q 001867 835 DGDFG--------ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDP 905 (1002)
Q Consensus 835 ~~~~~--------~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~ 905 (1002)
+.++. +||+|||++...... ....||+.|+|||++.+ ..++.++||||+|+++|||++|+.|+..
T Consensus 147 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~ 220 (289)
T 4fvq_A 147 IREEDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS 220 (289)
T ss_dssp EECCBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ecCCcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcc
Confidence 98887 999999998754321 23458899999999887 6789999999999999999997666654
Q ss_pred CCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 906 EFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
............. ..... +. .. .++.+++.+||+.||++|||++|+++.|+++..
T Consensus 221 ~~~~~~~~~~~~~---~~~~~----~~---~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 221 ALDSQRKLQFYED---RHQLP----AP---KA----AELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp TSCHHHHHHHHHT---TCCCC----CC---SS----CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred ccchHHHHHHhhc---cCCCC----CC---CC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 4333332222211 11111 11 11 136788999999999999999999999999865
No 151
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=362.41 Aligned_cols=276 Identities=17% Similarity=0.204 Sum_probs=204.9
Q ss_pred cCCCcCCeeeecCCccEEEEEEc----CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS----NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|++.+.||+|+||.||+|... ++..||+|++....... ..............+.+|+.+++.++||||
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~------~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni 110 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPL------FSELKFYQRVAKKDCIKKWIERKQLDYLGI 110 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHH------HHHHHHHHHHCCHHHHHHHHHHHTCSCCCC
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcch------HHHHHHHHHHhhhHHHHHHHhhccccccCc
Confidence 46888999999999999999975 57889999985431100 000011122233457789999999999999
Q ss_pred eeeeeEEec----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 759 VKLWCCCTT----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 759 v~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
+++++++.. ....|+||||+ +++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 111 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 184 (345)
T 2v62_A 111 PLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL 184 (345)
T ss_dssp CCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred ceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEE
Confidence 999999987 77899999999 999999998543 799999999999999999999999 99999999999999
Q ss_pred CCCC--CeEEccccCcccccCCCCC-----cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 001867 835 DGDF--GARVADFGVAKVVDASGKP-----KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF 907 (1002)
Q Consensus 835 ~~~~--~~kl~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~ 907 (1002)
+.++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 264 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL 264 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT
T ss_pred ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 8877 9999999999876533211 11235579999999999999999999999999999999999999996543
Q ss_pred CchhHHHHHHHHhhccCcccccccccc-CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 908 GEKDLVKWVCSTLDQKGVDHVLDPKLD-CCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
........................... ..+. ++.+++..||+.||++||++++|++.|+++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 265 KDPVAVQTAKTNLLDELPQSVLKWAPSGSSCC----EIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp TCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cccHHHHHHHHhhcccccHHHHhhccccccHH----HHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 333323222222222111111000000 2222 48889999999999999999999999988754
No 152
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.6e-38 Score=344.56 Aligned_cols=258 Identities=31% Similarity=0.468 Sum_probs=201.6
Q ss_pred cCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||.||+|+. .+++.||+|++....... ........+.+.+|+.++++++||||+++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 88 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG----------ETEMIEKFQEFQREVFIMSNLNHPNIVKL 88 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTC----------CHHHHCCSHHHHHHHHHHTTCCCTTBCCE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeecccccc----------chhHHHHHHHHHHHHHHHHhCCCCCchhh
Confidence 5678889999999999999997 468999999985432110 00011122678999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEECCCCC
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPS--IVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--iiHrDlk~~NIll~~~~~ 839 (1002)
++++.+.. ++||||+++|+|.+++.. +...+++..++.++.|++.||+|||++ + |+||||||+||+++.++.
T Consensus 89 ~~~~~~~~--~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~ 162 (287)
T 4f0f_A 89 YGLMHNPP--RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDE 162 (287)
T ss_dssp EEEETTTT--EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCT
T ss_pred heeecCCC--eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCC
Confidence 99997665 699999999999998875 345799999999999999999999998 8 999999999999988776
Q ss_pred -----eEEccccCcccccCCCCCcccccccccccccCccccc--cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchh-
Q 001867 840 -----ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY--TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD- 911 (1002)
Q Consensus 840 -----~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~- 911 (1002)
+||+|||+++.... ......||+.|+|||++. ...++.++||||+|+++|||++|+.||........
T Consensus 163 ~~~~~~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~ 237 (287)
T 4f0f_A 163 NAPVCAKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237 (287)
T ss_dssp TCSCCEEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH
T ss_pred CCceeEEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH
Confidence 99999999975433 233457999999999984 45578899999999999999999999975433221
Q ss_pred HHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Q 001867 912 LVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEV 972 (1002)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 972 (1002)
....... ......+ ....+ ..+.+++.+||+.||++|||++|+++.|+++
T Consensus 238 ~~~~~~~----~~~~~~~---~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 238 FINMIRE----EGLRPTI---PEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHH----SCCCCCC---CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHhc----cCCCCCC---CcccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111111 1111111 11222 2478899999999999999999999999763
No 153
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.5e-39 Score=354.11 Aligned_cols=264 Identities=24% Similarity=0.371 Sum_probs=198.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+......+.+|+.++++++||||++
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~iv~ 76 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL--------------ARDPSFYLRFRREAQNAAALNHPAIVA 76 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTT--------------TTSHHHHHHHHHHHTTCCCCCCTTBCC
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccc--------------cCCHHHHHHHHHHHHHHHcCCCCCcce
Confidence 46788899999999999999996 568999999985431 123445667999999999999999999
Q ss_pred eeeEEecCCe----eeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECC
Q 001867 761 LWCCCTTRDC----KLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDG 836 (1002)
Q Consensus 761 l~~~~~~~~~----~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~ 836 (1002)
+++++..... .|+||||+++++|.++++.. +.+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~ 151 (311)
T 3ork_A 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISA 151 (311)
T ss_dssp EEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET
T ss_pred EEEeeeccCCCCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcC
Confidence 9999976543 39999999999999999753 4699999999999999999999999 9999999999999999
Q ss_pred CCCeEEccccCcccccCCCCC-cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 837 DFGARVADFGVAKVVDASGKP-KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 837 ~~~~kl~DfGl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
++.+||+|||+++........ .......||+.|+|||++.+..++.++||||+|+++|||++|+.||............
T Consensus 152 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~ 231 (311)
T 3ork_A 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231 (311)
T ss_dssp TSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999999999999876544322 2233456899999999999999999999999999999999999999755332222221
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHHhhh
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRR-VVKLLQEVGA 974 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e-vl~~L~~~~~ 974 (1002)
........ ........ .++.+++.+||+.||++||++.+ +.+.+.+...
T Consensus 232 ----~~~~~~~~--~~~~~~~~----~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 232 ----VREDPIPP--SARHEGLS----ADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp ----HHCCCCCH--HHHSTTCC----HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ----hcCCCCCc--ccccCCCC----HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 11111100 00011122 24778999999999999996554 5566666544
No 154
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-38 Score=355.08 Aligned_cols=263 Identities=22% Similarity=0.325 Sum_probs=206.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEE------cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL------SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH 755 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 755 (1002)
.++|++.+.||+|+||.||+|++ .+++.||||++... .......++.+|+.++++++|
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h 92 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV----------------CSEQDELDFLMEALIISKFNH 92 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS----------------CCHHHHHHHHHHHHHHHHCCC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc----------------cchhhHHHHHHHHHHHhhCCC
Confidence 35788889999999999999984 34678999998432 123445678999999999999
Q ss_pred CceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCC
Q 001867 756 KNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG-----GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSN 830 (1002)
Q Consensus 756 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~ 830 (1002)
|||+++++++.+.+..|+||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+
T Consensus 93 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~ 169 (327)
T 2yfx_A 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAAR 169 (327)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred CCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHh
Confidence 9999999999999999999999999999999986432 4589999999999999999999999 9999999999
Q ss_pred cEEECC---CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCC
Q 001867 831 NILLDG---DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPE 906 (1002)
Q Consensus 831 NIll~~---~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~ 906 (1002)
||+++. +..+||+|||++................||+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 170 NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 249 (327)
T 2yfx_A 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249 (327)
T ss_dssp GEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred HEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence 999984 44699999999987655443333445568899999999999999999999999999999998 88998654
Q ss_pred CCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 907 FGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
. ..+....+...... +.....+ ..+.+++.+||+.||++||+++++++.++.+....
T Consensus 250 ~-~~~~~~~~~~~~~~--------~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 250 S-NQEVLEFVTSGGRM--------DPPKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp C-HHHHHHHHHTTCCC--------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred C-HHHHHHHHhcCCCC--------CCCCCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 2 22222222211110 0111222 24788999999999999999999999999886544
No 155
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.3e-38 Score=366.08 Aligned_cols=207 Identities=25% Similarity=0.367 Sum_probs=172.2
Q ss_pred CcHHHHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC
Q 001867 676 FSEYEILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR 754 (1002)
Q Consensus 676 ~~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 754 (1002)
...+++.++|++.+.||+|+||.||+|... +++.||||++... .......+++.+|+.++++++
T Consensus 19 ~~~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~ 83 (432)
T 3n9x_A 19 IKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM---------------FEDLIDCKRILREITILNRLK 83 (432)
T ss_dssp GGGCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST---------------TTSHHHHHHHHHHHHHHHHCC
T ss_pred CCcceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch---------------hcChHHHHHHHHHHHHHHHcC
Confidence 344566788999999999999999999964 5889999998432 224455678999999999999
Q ss_pred CCceeeeeeEEecC-----CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCC
Q 001867 755 HKNIVKLWCCCTTR-----DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKS 829 (1002)
Q Consensus 755 h~niv~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~ 829 (1002)
||||+++++++... +..|+||||++ |+|.++++. ...+++..++.++.||+.||+|||++ +|+||||||
T Consensus 84 h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp 157 (432)
T 3n9x_A 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKP 157 (432)
T ss_dssp CTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred CCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCH
Confidence 99999999999766 57899999995 699999974 46699999999999999999999999 999999999
Q ss_pred CcEEECCCCCeEEccccCcccccCCCCC--------------------cccccccccccccCcccc-ccCCCCCccchhh
Q 001867 830 NNILLDGDFGARVADFGVAKVVDASGKP--------------------KSMSVIAGSCGYIAPEYA-YTLRVNEKSDIYS 888 (1002)
Q Consensus 830 ~NIll~~~~~~kl~DfGl~~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dvws 888 (1002)
+||+++.++.+||+|||+++........ ......+||+.|+|||++ .+..++.++||||
T Consensus 158 ~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwS 237 (432)
T 3n9x_A 158 ANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWS 237 (432)
T ss_dssp GGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHH
T ss_pred HHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccch
Confidence 9999999999999999999877543221 123566899999999985 5667999999999
Q ss_pred HHHHHHHHHhCCCCC
Q 001867 889 FGVVILELVTGRLPV 903 (1002)
Q Consensus 889 lGvil~ell~g~~p~ 903 (1002)
+||++|||++|..||
T Consensus 238 lG~il~ell~g~~p~ 252 (432)
T 3n9x_A 238 TGCIFAELLNMLQSH 252 (432)
T ss_dssp HHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHhccccc
Confidence 999999999865554
No 156
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-38 Score=350.18 Aligned_cols=265 Identities=20% Similarity=0.224 Sum_probs=201.0
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
..++|++.+.||+|+||.||+|... +++.||+|++.... ..+....+.+.+|+.++++++||||+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~hp~iv 97 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETL--------------SSDPVFRTRMQREARTAGRLQEPHVV 97 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGG--------------GGSHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccc--------------ccCHHHHHHHHHHHHHHhhcCCCCee
Confidence 3578999999999999999999975 68899999984321 12334457899999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++..++..|+||||+++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~ 172 (309)
T 2h34_A 98 PIHDFGEIDGQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDF 172 (309)
T ss_dssp CEEEEEEETTEEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred EEEEEEeeCCeEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCC
Confidence 9999999999999999999999999999853 4699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||++........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... . .....
T Consensus 173 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~----~~~~~ 246 (309)
T 2h34_A 173 AYLVDFGIASATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-S----VMGAH 246 (309)
T ss_dssp EEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-H----HHHHH
T ss_pred EEEecCccCcccccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-H----HHHHH
Confidence 99999999987654322 222345689999999999999999999999999999999999999975421 1 11111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHHhhhhc
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-AMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~evl~~L~~~~~~~ 976 (1002)
........ .......+. .+.+++.+||+.||++|| +++++++.|+++....
T Consensus 247 ~~~~~~~~--~~~~~~~~~----~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 247 INQAIPRP--STVRPGIPV----AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHSCCCCG--GGTSTTCCT----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred hccCCCCc--cccCCCCCH----HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 11111100 001112222 477899999999999999 9999999999886544
No 157
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.9e-38 Score=349.90 Aligned_cols=264 Identities=23% Similarity=0.343 Sum_probs=200.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc----CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS----NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
.++|.+.+.||+|+||.||+|... .+..||+|++.... ......+.+.+|+.++++++|||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~ 97 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN---------------SSQREIEEFLSEAACMKDFSHPN 97 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C---------------CCHHHHHHHHHHHHHHHTCCCTT
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc---------------cchhHHHHHHHHHHHHhcCCCCC
Confidence 357888899999999999999864 24589999984321 12344567999999999999999
Q ss_pred eeeeeeEEecCC-----eeeEEEeccCCCChhhhhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCC
Q 001867 758 IVKLWCCCTTRD-----CKLLVYEYMPNGSLGDLLHSC----KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVK 828 (1002)
Q Consensus 758 iv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk 828 (1002)
|+++++++.+.+ ..++||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+|||||
T Consensus 98 iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dik 174 (313)
T 3brb_A 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLA 174 (313)
T ss_dssp BCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCS
T ss_pred eeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999998755 349999999999999998532 346799999999999999999999999 99999999
Q ss_pred CCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCC
Q 001867 829 SNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEF 907 (1002)
Q Consensus 829 ~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~ 907 (1002)
|+||+++.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 175 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 175 ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp GGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 9999999999999999999987765443334445567889999999999999999999999999999999 888886553
Q ss_pred CchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 908 GEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
. ............. +.....+ ..+.+++.+||+.||++||+++++++.|+++....
T Consensus 255 ~-~~~~~~~~~~~~~--------~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 255 N-HEMYDYLLHGHRL--------KQPEDCL----DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp G-GGHHHHHHTTCCC--------CCBTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred H-HHHHHHHHcCCCC--------CCCcccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 3 3333322211110 1112222 24788999999999999999999999999986543
No 158
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3e-38 Score=344.55 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=205.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+.+|+.++++++||||++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~ 69 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---------------LSARDFQKLEREARICRKLQHPNIVR 69 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG---------------CCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc---------------CCHHHHHHHHHHHHHHHHcCCCCcCe
Confidence 467888999999999999999964 58999999985421 13344567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC-
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG- 839 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~- 839 (1002)
+++++...+..++||||+++++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 70 ~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~ 144 (284)
T 3kk8_A 70 LHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKG 144 (284)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTT
T ss_pred EEEEEEcCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCC
Confidence 999999999999999999999999988753 5699999999999999999999999 9999999999999986655
Q ss_pred --eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 840 --ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 840 --~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+||+|||++........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+.
T Consensus 145 ~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~ 220 (284)
T 3kk8_A 145 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIK 220 (284)
T ss_dssp CCEEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred CcEEEeeceeeEEcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHH
Confidence 99999999987654322 23457999999999999999999999999999999999999999764322 2222221
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
... . ....+......+ .+.+++.+|++.||++|||++|+++
T Consensus 221 ~~~----~-~~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 221 AGA----Y-DYPSPEWDTVTP----EAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HTC----C-CCCTTTTTTSCH----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hcc----c-cCCchhhcccCH----HHHHHHHHHcccChhhCCCHHHHhc
Confidence 111 1 111111222333 4778999999999999999999987
No 159
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-38 Score=351.51 Aligned_cols=262 Identities=26% Similarity=0.429 Sum_probs=203.4
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC-----CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN-----GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
+.|+..+.||+|+||.||+|.... +..||||++.... .......+.+|+.++++++|||
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~ 107 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY----------------TEKQRVDFLGEAGIMGQFSHHN 107 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC----------------CHHHHHHHHHHHHHHHTCCCTT
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC----------------CHHHHHHHHHHHHHHHhCCCCC
Confidence 456678899999999999998643 2359999984321 2344567999999999999999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
|+++++++.+.+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 108 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~ 183 (333)
T 1mqb_A 108 IIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSN 183 (333)
T ss_dssp BCCEEEEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTT
T ss_pred CCcEEEEEecCCCcEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCC
Confidence 99999999999999999999999999999976 345799999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCC-cccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHH
Q 001867 838 FGARVADFGVAKVVDASGKP-KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~ 915 (1002)
+.+||+|||+++........ .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... .+....
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-~~~~~~ 262 (333)
T 1mqb_A 184 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKA 262 (333)
T ss_dssp CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHH
T ss_pred CcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-HHHHHH
Confidence 99999999999876543221 12223356789999999999999999999999999999999 9999965432 222222
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhcc
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 977 (1002)
+.... .. +.....+ ..+.+++.+||+.||++||+++++++.|+++.....
T Consensus 263 ~~~~~---~~-----~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 263 INDGF---RL-----PTPMDCP----SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp HHTTC---CC-----CCCTTCB----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred HHCCC---cC-----CCcccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 21111 00 1111222 247889999999999999999999999999875433
No 160
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.3e-38 Score=370.52 Aligned_cols=263 Identities=24% Similarity=0.276 Sum_probs=199.1
Q ss_pred HHHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 679 YEILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 679 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
+.+.++|++.+.||+|+||.||+|... +++.||||++.+. .......+++.+|+.+++.++|||
T Consensus 58 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~hpn 122 (464)
T 3ttj_A 58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---------------FQNQTHAKRAYRELVLMKCVNHKN 122 (464)
T ss_dssp EEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG---------------GGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred eeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc---------------ccChHHHHHHHHHHHHHHhCCCCC
Confidence 445678999999999999999999964 5899999998542 223455677899999999999999
Q ss_pred eeeeeeEEecC------CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 001867 758 IVKLWCCCTTR------DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNN 831 (1002)
Q Consensus 758 iv~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~N 831 (1002)
|+++++++... ...|+||||+++ ++.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 123 Iv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~N 194 (464)
T 3ttj_A 123 IISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSN 194 (464)
T ss_dssp BCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred CCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHh
Confidence 99999999755 356999999964 5766664 2489999999999999999999999 99999999999
Q ss_pred EEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchh
Q 001867 832 ILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD 911 (1002)
Q Consensus 832 Ill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~ 911 (1002)
|+++.++.+||+|||+++...... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+.
T Consensus 195 Ill~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~ 271 (464)
T 3ttj_A 195 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271 (464)
T ss_dssp EEECTTSCEEECCCCCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EEEeCCCCEEEEEEEeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999999999999999998765432 23456799999999999999999999999999999999999999976543333
Q ss_pred HHHHHHHHhhc------------------c------Cccccccccc-c---CCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 001867 912 LVKWVCSTLDQ------------------K------GVDHVLDPKL-D---CCFKEEICKVLNIGLLCTSPLPINRPAMR 963 (1002)
Q Consensus 912 ~~~~~~~~~~~------------------~------~~~~~~~~~~-~---~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 963 (1002)
+...+...... . .....+.... . ........++.+++.+|++.||++|||++
T Consensus 272 ~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~ 351 (464)
T 3ttj_A 272 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 351 (464)
T ss_dssp HHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHH
Confidence 33322211100 0 0000000000 0 00011134688999999999999999999
Q ss_pred HHHH
Q 001867 964 RVVK 967 (1002)
Q Consensus 964 evl~ 967 (1002)
|+++
T Consensus 352 e~L~ 355 (464)
T 3ttj_A 352 DALQ 355 (464)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9985
No 161
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=363.43 Aligned_cols=270 Identities=22% Similarity=0.259 Sum_probs=212.0
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
+.|.+.++||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||+++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~hpnIv~~ 72 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS----------------FLRPVDVQMREFEVLKKLNHKNIVKL 72 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG----------------GGSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc----------------ccchHHHHHHHHHHHHhcCCCCCCeE
Confidence 46788899999999999999975 48999999984321 12235667899999999999999999
Q ss_pred eeEEecCC--eeeEEEeccCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE----
Q 001867 762 WCCCTTRD--CKLLVYEYMPNGSLGDLLHSCKG-GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL---- 834 (1002)
Q Consensus 762 ~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll---- 834 (1002)
++++...+ ..++||||+++|+|.++++.... ..+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 149 (396)
T 4eut_A 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGE 149 (396)
T ss_dssp EEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECT
T ss_pred EEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecC
Confidence 99998755 77999999999999999986432 3499999999999999999999999 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCCCcccccccccccccCcccccc--------CCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 001867 835 DGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT--------LRVNEKSDIYSFGVVILELVTGRLPVDPE 906 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslGvil~ell~g~~p~~~~ 906 (1002)
+.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~kL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 226 (396)
T 4eut_A 150 DGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (396)
T ss_dssp TSCEEEEECCGGGCEECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCceeEEEecCCCceEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 777789999999998765432 2234569999999998865 56778999999999999999999999754
Q ss_pred CCchhHHHHHHHHhhccCccc---c------------ccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Q 001867 907 FGEKDLVKWVCSTLDQKGVDH---V------------LDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQE 971 (1002)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~ 971 (1002)
.........+........... . ..+............+.+++.+||+.||++||+++|+++.+++
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp TCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 333322222222222111100 0 0011123335566678899999999999999999999999998
Q ss_pred hhh
Q 001867 972 VGA 974 (1002)
Q Consensus 972 ~~~ 974 (1002)
+..
T Consensus 307 il~ 309 (396)
T 4eut_A 307 ILH 309 (396)
T ss_dssp HHT
T ss_pred Hhh
Confidence 864
No 162
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.6e-38 Score=353.59 Aligned_cols=261 Identities=22% Similarity=0.348 Sum_probs=211.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH 755 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 755 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++... ........+.+|+.++++++|
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h 87 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA----------------ASMRERIEFLNEASVMKEFNC 87 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT----------------SCHHHHHHHHHHHHHGGGCCC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc----------------cCHHHHHHHHHHHHHHHhcCC
Confidence 357888999999999999999864 3678999998432 123345678999999999999
Q ss_pred CceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCC
Q 001867 756 KNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK--------GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDV 827 (1002)
Q Consensus 756 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl 827 (1002)
|||+++++++.+.+..++||||+++|+|.++++... ...+++..++.++.|++.||+|||++ +|+||||
T Consensus 88 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~di 164 (322)
T 1p4o_A 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDL 164 (322)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCC
T ss_pred CCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCC
Confidence 999999999999999999999999999999987532 14679999999999999999999999 9999999
Q ss_pred CCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCC
Q 001867 828 KSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPE 906 (1002)
Q Consensus 828 k~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~ 906 (1002)
||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||+|+++|||++ |+.||...
T Consensus 165 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp SGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred ccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 99999999999999999999987655433333344567889999999999999999999999999999999 88888654
Q ss_pred CCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 907 FGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
. ..+....+.. ... .+.....+ ..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 245 ~-~~~~~~~~~~----~~~----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 245 S-NEQVLRFVME----GGL----LDKPDNCP----DMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp C-HHHHHHHHHT----TCC----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred C-HHHHHHHHHc----CCc----CCCCCCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 2 2222222211 111 01112222 247889999999999999999999999988744
No 163
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=349.00 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=199.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++... .......+.+.+|+.++++++||||++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~h~~i~~ 66 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES---------------EDDPVIKKIALREIRMLKQLKHPNLVN 66 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCC---------------CC-HHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecc---------------ccchHHHHHHHHHHHHHHhCCCCCccc
Confidence 467888999999999999999975 5899999988432 123344677889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~ 141 (311)
T 4agu_A 67 LLEVFRRKRRLHLVFEYCDHTVLHELDRY--QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVI 141 (311)
T ss_dssp EEEEEEETTEEEEEEECCSEEHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred hhheeecCCeEEEEEEeCCCchHHHHHhh--hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCE
Confidence 99999999999999999999999998873 45699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++........ ......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||......+...... ..
T Consensus 142 kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~ 218 (311)
T 4agu_A 142 KLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR-KT 218 (311)
T ss_dssp EECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-HH
T ss_pred EEeeCCCchhccCccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HH
Confidence 9999999987654322 2234578999999999876 668999999999999999999999997654333322221 11
Q ss_pred hhc-----------c-Ccc--cccccccc----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQ-----------K-GVD--HVLDPKLD----CCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~-----------~-~~~--~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
... . ... ...++... ...+.....+.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 219 LGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred hcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 100 0 000 00011000 000111234788999999999999999999984
No 164
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.1e-38 Score=362.20 Aligned_cols=251 Identities=24% Similarity=0.317 Sum_probs=192.6
Q ss_pred HhcCCCcC-CeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhc-CCCCc
Q 001867 681 ILDGLDED-NVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGK-IRHKN 757 (1002)
Q Consensus 681 ~~~~~~~~-~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~n 757 (1002)
+.++|.+. +.||+|+||+||+|..+ +++.||||++.. ...+.+|++++.+ .+|||
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----------------------~~~~~~E~~~~~~~~~hp~ 116 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----------------------CPKARREVELHWRASQCPH 116 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----------------------SHHHHHHHHHHHHHTTSTT
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----------------------chhHHHHHHHHHHhcCCCC
Confidence 45667665 68999999999999975 688999999832 1346778888754 47999
Q ss_pred eeeeeeEEec----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 001867 758 IVKLWCCCTT----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNIL 833 (1002)
Q Consensus 758 iv~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIl 833 (1002)
|+++++++.. .+..|+||||+++|+|.+++.......+++..++.++.||+.||+|||++ +|+||||||+||+
T Consensus 117 iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nil 193 (400)
T 1nxk_A 117 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLL 193 (400)
T ss_dssp BCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred cceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEE
Confidence 9999999875 56789999999999999999865556799999999999999999999999 9999999999999
Q ss_pred ECC---CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCch
Q 001867 834 LDG---DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK 910 (1002)
Q Consensus 834 l~~---~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~ 910 (1002)
++. ++.+||+|||+++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 194 l~~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 270 (400)
T 1nxk_A 194 YTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 270 (400)
T ss_dssp ESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCS
T ss_pred EecCCCCccEEEEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccc
Confidence 987 7889999999998664332 2335578999999999999999999999999999999999999997654322
Q ss_pred ---hHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 911 ---DLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 911 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.....+.. ... ....+....... ++.+++.+||+.||++|||++|+++.
T Consensus 271 ~~~~~~~~i~~----~~~-~~~~~~~~~~s~----~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 271 ISPGMKTRIRM----GQY-EFPNPEWSEVSE----EVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp SCCSHHHHHHH----TCC-CCCTTTTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccHHHHHHHHc----Ccc-cCCCcccccCCH----HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 12222111 111 011111122233 47889999999999999999999964
No 165
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.9e-38 Score=350.02 Aligned_cols=257 Identities=22% Similarity=0.289 Sum_probs=206.9
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.+.|++.+.||+|+||.||+|... +|+.||+|++....... .......+.+.+|+.++++++||||+
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~~~~E~~~l~~l~h~~iv 78 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRA-----------SRRGVSREEIEREVSILRQVLHHNVI 78 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSS-----------CSSSBCHHHHHHHHHHHHHCCCTTBC
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccc-----------cccchhHHHHHHHHHHHHhCCCCCcc
Confidence 3467888999999999999999975 58999999986542211 11122356799999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC-
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF- 838 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~- 838 (1002)
++++++.+.+..++||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~ 153 (321)
T 2a2a_A 79 TLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNI 153 (321)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTS
T ss_pred eEEEEEecCCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCC
Confidence 999999999999999999999999999974 45689999999999999999999999 999999999999999887
Q ss_pred ---CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 839 ---GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 839 ---~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
.+||+|||++........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... ....
T Consensus 154 ~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~ 229 (321)
T 2a2a_A 154 PIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLAN 229 (321)
T ss_dssp SSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHH
T ss_pred CcCCEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHHH
Confidence 799999999987655322 234469999999999999999999999999999999999999997543222 2211
Q ss_pred HHHHhhccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+.. ... ..++.. .... ..+.+++.+||+.||++|||++|+++
T Consensus 230 i~~----~~~--~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 230 ITS----VSY--DFDEEFFSHTS----ELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHT----TCC--CCCHHHHTTCC----HHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHh----ccc--ccChhhhcccC----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111 000 011111 1122 24778999999999999999999985
No 166
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.5e-38 Score=343.38 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=180.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .......+.+.+|+.++++++||||++
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 77 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKV--------------LAKSDMQGRIEREISYLRLLRHPHIIK 77 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-------------------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhh--------------cchHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 46799999999999999999985 568999999985431 112334567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+ +++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 78 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~ 151 (275)
T 2eue_A 78 LYDVIKSKDEIIMVIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNV 151 (275)
T ss_dssp EEEEEECSSCEEEEEECC-CEEHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCE
T ss_pred EEEEEecCCeEEEEehhc-CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCE
Confidence 999999999999999999 7888888874 45699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++........ .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||...... .....+...
T Consensus 152 kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~ 227 (275)
T 2eue_A 152 KIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNG 227 (275)
T ss_dssp EECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT
T ss_pred EEeecccceeccCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC
Confidence 9999999986654322 234468999999999887765 68999999999999999999999754322 222211111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. +...... ..+.+++.+||+.||++|||++|+++
T Consensus 228 ----~~-----~~~~~~~----~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 228 ----VY-----TLPKFLS----PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----CC-----CCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----CC-----CCCccCC----HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 10 0011122 24778999999999999999999874
No 167
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1e-38 Score=360.13 Aligned_cols=250 Identities=23% Similarity=0.244 Sum_probs=192.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHH-HhcCCCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVET-LGKIRHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv 759 (1002)
.++|++.+.||+|+||.||+|+.+ +++.||||++.+.. .......+.+.+|..+ ++.++||||+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~--------------~~~~~~~~~~~~e~~~ll~~~~hp~Iv 102 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKA--------------ILKKKEEKHIMSERNVLLKNVKHPFLV 102 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGG--------------BC-------------CCBCCCCCTTBC
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHH--------------hhhhHHHHHHHHHHHHHHHhCCCCCCC
Confidence 467888999999999999999975 57899999985432 1123334556777777 5678999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..|+||||+++|+|.+++.. .+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 103 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ 177 (373)
T 2r5t_A 103 GLHFSFQTADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGH 177 (373)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSC
T ss_pred CEEEEEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCC
Confidence 999999999999999999999999999985 34689999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||+++....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........+.....
T Consensus 178 ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~-- 253 (373)
T 2r5t_A 178 IVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN-- 253 (373)
T ss_dssp EEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHH--
T ss_pred EEEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh--
Confidence 99999999986433221 23456799999999999999999999999999999999999999975432222222111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVV 966 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl 966 (1002)
. ... +. .... ..+.+++.+|++.||++||++.+..
T Consensus 254 --~-~~~--~~---~~~~----~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 254 --K-PLQ--LK---PNIT----NSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp --S-CCC--CC---SSSC----HHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred --c-ccC--CC---CCCC----HHHHHHHHHHcccCHHhCCCCCCCH
Confidence 1 110 11 1122 2477899999999999999986433
No 168
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=357.49 Aligned_cols=252 Identities=13% Similarity=0.151 Sum_probs=205.7
Q ss_pred cCCCcCCeeeecCCccEEEEE------EcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC--
Q 001867 683 DGLDEDNVIGSGSSGKVYKVV------LSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-- 754 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-- 754 (1002)
++|.+.+.||+|+||.||+|. ..+++.||||++.. ....++..|++++++++
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~--------------------~~~~~~~~e~~~~~~l~~~ 124 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP--------------------ANPWEFYIGTQLMERLKPS 124 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS--------------------CCHHHHHHHHHHHHHSCGG
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC--------------------CChhHHHHHHHHHHHhhhh
Confidence 457788999999999999993 45688999999832 12456788888888887
Q ss_pred -CCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCC
Q 001867 755 -HKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSC---KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSN 830 (1002)
Q Consensus 755 -h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~ 830 (1002)
|+||+++++++...+..|+||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +||||||||+
T Consensus 125 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~ 201 (365)
T 3e7e_A 125 MQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPD 201 (365)
T ss_dssp GGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGG
T ss_pred hhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHH
Confidence 999999999999999999999999999999999753 346799999999999999999999999 9999999999
Q ss_pred cEEECC-----------CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhC
Q 001867 831 NILLDG-----------DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTG 899 (1002)
Q Consensus 831 NIll~~-----------~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g 899 (1002)
||+++. ++.+||+|||+++..............+||+.|||||++.+..++.++|||||||++|||++|
T Consensus 202 NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg 281 (365)
T 3e7e_A 202 NFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFG 281 (365)
T ss_dssp GEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHS
T ss_pred HEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhC
Confidence 999998 899999999999876544344445567899999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHHHHHhhccCccccccccccC-CCHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHHhhhhc
Q 001867 900 RLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDC-CFKEEICKVLNIGLLCTSPLPINR-PAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 900 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~R-ps~~evl~~L~~~~~~~ 976 (1002)
+.||....... ..+...... ...+ .+.+++..|++.+|.+| |+++++.+.|+++....
T Consensus 282 ~~pf~~~~~~~----------------~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 282 TYMKVKNEGGE----------------CKPEGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp SCCCEEEETTE----------------EEECSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCc----------------eeechhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 99985432111 001111111 1223 35677788999999998 78999999999887654
No 169
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.8e-38 Score=346.99 Aligned_cols=268 Identities=21% Similarity=0.327 Sum_probs=203.3
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
..++|++.+.||+|+||.||+|.. .+++.||||++... ...+....+.+.+|+.++++++||||+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--------------~~~~~~~~~~~~~E~~~l~~l~h~~i~ 95 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIF--------------DLMDAKARADCIKEIDLLKQLNHPNVI 95 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTT--------------SSCCHHHHHHHHHHHHHHHTCCCTTBC
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehh--------------hccCHHHHHHHHHHHHHHHhCCCCCEe
Confidence 356788899999999999999996 56899999998432 112345567899999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSC--KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
++++++...+..++||||+++++|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~ 172 (310)
T 2wqm_A 96 KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITAT 172 (310)
T ss_dssp CEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred eEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCC
Confidence 9999999999999999999999999998752 346799999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+.+||+|||++........ ......|++.|+|||++.+..++.++||||||+++|+|++|+.||....... .....
T Consensus 173 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~ 248 (310)
T 2wqm_A 173 GVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL--YSLCK 248 (310)
T ss_dssp SCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH--HHHHH
T ss_pred CCEEEEeccceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH--HHHHH
Confidence 9999999999987654322 2234468999999999999999999999999999999999999997543221 11111
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhcc
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 977 (1002)
. .......... ...... .+.+++.+||+.||++|||++++++.|+++.+..+
T Consensus 249 ~-~~~~~~~~~~---~~~~~~----~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 249 K-IEQCDYPPLP---SDHYSE----ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp H-HHTTCSCCCC---TTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred H-hhcccCCCCc---ccccCH----HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 1 1111111110 012222 47789999999999999999999999999987543
No 170
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5e-39 Score=381.15 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=208.7
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
++|++.+.||+|+||.||+|.+.++..||||++... ....+.|.+|++++++++||||++++
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~------------------~~~~~~~~~E~~~l~~l~hpniv~~~ 328 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG------------------TMSPEAFLQEAQVMKKLRHEKLVQLY 328 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTT------------------SSCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCC------------------CCCHHHHHHHHHHHHhCCCCCEeeEE
Confidence 457778899999999999999988889999998432 11246799999999999999999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEE
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARV 842 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl 842 (1002)
+++.+ +..|+||||+++|+|.++++......+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 329 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl 404 (535)
T 2h8h_A 329 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKV 404 (535)
T ss_dssp EEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEE
Confidence 99876 6789999999999999999865556799999999999999999999999 9999999999999999999999
Q ss_pred ccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 001867 843 ADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLD 921 (1002)
Q Consensus 843 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 921 (1002)
+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+.....
T Consensus 405 ~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-~~~~~~~i~~~~~ 482 (535)
T 2h8h_A 405 ADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NREVLDQVERGYR 482 (535)
T ss_dssp CCTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-HHHHHHHHHTTCC
T ss_pred cccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCC
Confidence 99999986643211 11123356789999999999999999999999999999999 899986543 2233332221111
Q ss_pred ccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 922 QKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
.+....++ ..+.+++.+||+.||++|||+++|++.|+++..
T Consensus 483 --------~~~~~~~~----~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 483 --------MPCPPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp --------CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred --------CCCCCCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 01112222 247889999999999999999999999998754
No 171
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.1e-38 Score=344.97 Aligned_cols=276 Identities=18% Similarity=0.239 Sum_probs=210.4
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
.+.++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+|+.++++++|+++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------------------~~~~~~~~e~~~l~~l~~~~~ 66 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-------------------TKHPQLHIESKIYKMMQGGVG 66 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----------------------CCCHHHHHHHHHHHTTSTT
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc-------------------ccchHHHHHHHHHHHhcCCCC
Confidence 4457899999999999999999996 56899999986332 123458889999999998776
Q ss_pred eeeeeEE-ecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---
Q 001867 759 VKLWCCC-TTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL--- 834 (1002)
Q Consensus 759 v~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll--- 834 (1002)
+..++++ ...+..++||||+ +++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 67 i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~ 141 (296)
T 4hgt_A 67 IPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLG 141 (296)
T ss_dssp CCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCG
T ss_pred CCeeeeecCCCCceEEEEEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeecc
Confidence 6666555 6778889999999 99999999753 35699999999999999999999999 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCCC-----cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 835 DGDFGARVADFGVAKVVDASGKP-----KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
+.++.+||+|||+++........ .......||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 142 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 221 (296)
T 4hgt_A 142 KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA 221 (296)
T ss_dssp GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS
T ss_pred CCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh
Confidence 78899999999999877654321 1223557999999999999999999999999999999999999999754322
Q ss_pred --hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccccCCCCCCCC
Q 001867 910 --KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKKDGKL 987 (1002)
Q Consensus 910 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~~~~~~~ 987 (1002)
.................. .....+ ..+.+++.+||+.||++|||++++++.|+++...... ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~------~~~ 287 (296)
T 4hgt_A 222 TKRQKYERISEKKMSTPIEV----LCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF------SYD 287 (296)
T ss_dssp SSSSHHHHHHHHHHHSCHHH----HTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC------CTT
T ss_pred hhhhhhhhhhcccccchhhh----hhccCC----HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC------Ccc
Confidence 122221111111111000 001122 2488899999999999999999999999999765432 334
Q ss_pred Ccchhh
Q 001867 988 SPYYHE 993 (1002)
Q Consensus 988 ~~~~~~ 993 (1002)
.|+.|+
T Consensus 288 ~~~dw~ 293 (296)
T 4hgt_A 288 YVFDWN 293 (296)
T ss_dssp CCCGGG
T ss_pred Cccchh
Confidence 566665
No 172
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=344.02 Aligned_cols=260 Identities=22% Similarity=0.316 Sum_probs=208.1
Q ss_pred CCCcCC-eeeecCCccEEEEEEc---CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 684 GLDEDN-VIGSGSSGKVYKVVLS---NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 684 ~~~~~~-~LG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+|.+.+ .||+|+||.||+|... ++..||||++... ......+.+.+|++++++++||||+
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~~i~ 73 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----------------TEKADTEEMMREAQIMHQLDNPYIV 73 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS----------------CCHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc----------------cchhHHHHHHHHHHHHHhCCCCCEe
Confidence 344444 8999999999999853 5788999998432 1234567799999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++. .+..++||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 74 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~ 148 (287)
T 1u59_A 74 RLIGVCQ-AEALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHY 148 (287)
T ss_dssp CEEEEEE-SSSEEEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTE
T ss_pred EEEEEec-CCCcEEEEEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCC
Confidence 9999994 5568999999999999999975 345699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCc-ccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPK-SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~ 917 (1002)
+||+|||++.......... ......||+.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+....+.
T Consensus 149 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~i~ 227 (287)
T 1u59_A 149 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAFIE 227 (287)
T ss_dssp EEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-HHHHHHHH
T ss_pred EEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-HHHHHHHh
Confidence 9999999998775443221 1223456889999999998889999999999999999998 9999976533 23332222
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhcc
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 977 (1002)
.... . +.....+ ..+.+++..||+.||++||+++++++.|+++.....
T Consensus 228 ~~~~----~----~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 228 QGKR----M----ECPPECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp TTCC----C----CCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cCCc----C----CCCCCcC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1110 0 1111222 248889999999999999999999999999865443
No 173
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=348.92 Aligned_cols=246 Identities=24% Similarity=0.295 Sum_probs=193.5
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.++||+|+||+||+|+.. +++.||||++.... ........+..|+..+.++ +||||+
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~e~~~~~~~~~h~~iv 120 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF---------------RGPKDRARKLAEVGSHEKVGQHPCCV 120 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC---------------CSHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc---------------cChHHHHHHHHHHHHHHHhcCCCcEE
Confidence 367888999999999999999975 68999999874321 1233344555666666555 899999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..|+||||+ +++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 121 ~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~ 195 (311)
T 3p1a_A 121 RLEQAWEEGGILYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGR 195 (311)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGC
T ss_pred EEEEEEEeCCEEEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCC
Confidence 9999999999999999999 78999988764 45699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+... ... ..
T Consensus 196 ~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~---~~~-~~---- 263 (311)
T 3p1a_A 196 CKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG---EGW-QQ---- 263 (311)
T ss_dssp EEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH---HHH-HH----
T ss_pred EEEccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc---cHH-HH----
Confidence 9999999998765432 2334569999999998876 7899999999999999999997776432 111 11
Q ss_pred hhccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...... .+.. .... ..+.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~----~~~~~~~~~----~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 264 LRQGYL----PPEFTAGLS----SELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HTTTCC----CHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhccCC----CcccccCCC----HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 111111 1111 1122 34788999999999999999999984
No 174
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.6e-38 Score=354.34 Aligned_cols=268 Identities=22% Similarity=0.253 Sum_probs=205.7
Q ss_pred CCcHHHHhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC
Q 001867 675 GFSEYEILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI 753 (1002)
Q Consensus 675 ~~~~~~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 753 (1002)
+-+..++.++|++.+.||+|+||.||+|.. .+++.||+|++.+.... .......+.+.+|+.+++++
T Consensus 18 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~~~~~E~~~l~~l 85 (345)
T 3hko_A 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIR------------QINPKDVERIKTEVRLMKKL 85 (345)
T ss_dssp CBCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH------------C---CHHHHHHHHHHHHHHC
T ss_pred CchhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhc------------ccCHHHHHHHHHHHHHHHhC
Confidence 344567788999999999999999999996 46889999998543110 11234467899999999999
Q ss_pred CCCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcC--------------------------------------CCCC
Q 001867 754 RHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK--------------------------------------GGLL 795 (1002)
Q Consensus 754 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------~~~l 795 (1002)
+||||+++++++.+.+..++||||+++|+|.+++.... ...+
T Consensus 86 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (345)
T 3hko_A 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQ 165 (345)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHH
T ss_pred CCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999985210 1224
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC--CeEEccccCcccccCCCC--CcccccccccccccC
Q 001867 796 DWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF--GARVADFGVAKVVDASGK--PKSMSVIAGSCGYIA 871 (1002)
Q Consensus 796 ~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~--~~kl~DfGl~~~~~~~~~--~~~~~~~~gt~~y~a 871 (1002)
++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|
T Consensus 166 ~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 242 (345)
T 3hko_A 166 REKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVA 242 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccC
Confidence 6778899999999999999999 999999999999998776 899999999987644222 112345679999999
Q ss_pred cccccc--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHH
Q 001867 872 PEYAYT--LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGL 949 (1002)
Q Consensus 872 PE~~~~--~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 949 (1002)
||++.+ ..++.++|||||||++|||++|+.||................. ....+......+ .+.+++.
T Consensus 243 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----~~~~li~ 312 (345)
T 3hko_A 243 PEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL------CFENPNYNVLSP----LARDLLS 312 (345)
T ss_dssp HHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC------CTTSGGGGGSCH----HHHHHHH
T ss_pred chhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccc------ccCCcccccCCH----HHHHHHH
Confidence 999875 6788999999999999999999999976543332222221111 011111122222 4778999
Q ss_pred HcCCCCCCCCCCHHHHHH
Q 001867 950 LCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 950 ~cl~~dP~~Rps~~evl~ 967 (1002)
+||+.||++||++.|+++
T Consensus 313 ~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 313 NLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHSCSCTTTSCCHHHHHH
T ss_pred HHcCCChhHCCCHHHHhc
Confidence 999999999999999986
No 175
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.6e-38 Score=356.46 Aligned_cols=258 Identities=23% Similarity=0.250 Sum_probs=203.8
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-----C
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-----H 755 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h 755 (1002)
.++|++.++||+|+||.||+|+. .+++.||||++.. .......+..|+.+++++. |
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~------------------~~~~~~~~~~e~~~l~~l~~~~~~h 95 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN------------------IKKYTRSAKIEADILKKIQNDDINN 95 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS------------------CHHHHHHHHHHHHHHHHTCCCSTTG
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc------------------chhhhhhhHHHHHHHHHhcccCCCC
Confidence 46899999999999999999997 4688999999842 2334566788999999986 9
Q ss_pred CceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 756 KNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 756 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
|||+++++++...+..++||||+ +++|.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 96 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 171 (360)
T 3llt_A 96 NNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLD 171 (360)
T ss_dssp GGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred CCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEc
Confidence 99999999999999999999999 99999999876667799999999999999999999999 999999999999997
Q ss_pred C-------------------------CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHH
Q 001867 836 G-------------------------DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFG 890 (1002)
Q Consensus 836 ~-------------------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG 890 (1002)
. ++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 246 (360)
T 3llt_A 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFG 246 (360)
T ss_dssp CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHH
T ss_pred cccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHH
Confidence 5 7889999999998654332 245689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCchhHHHHHHHHhhccC-----------ccccccc-----ccc--CCCHH-------------
Q 001867 891 VVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKG-----------VDHVLDP-----KLD--CCFKE------------- 939 (1002)
Q Consensus 891 vil~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-----~~~--~~~~~------------- 939 (1002)
|++|||++|+.||....... ....+........ ....++. ... .....
T Consensus 247 ~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 325 (360)
T 3llt_A 247 CVLAELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK 325 (360)
T ss_dssp HHHHHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccc
Confidence 99999999999997653322 2222221111000 0000000 000 00000
Q ss_pred --HHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 940 --EICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 940 --~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
....+.+++.+||+.||++|||++|+++
T Consensus 326 ~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 326 IIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0134679999999999999999999874
No 176
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=352.67 Aligned_cols=251 Identities=23% Similarity=0.302 Sum_probs=203.2
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
..++|++.+.||+|+||.||+|.. .+++.||||++....... .........+.+.+|+.++++++||||+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~---------~~~~~~~~~~~~~~E~~~l~~l~h~~Iv 92 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE---------DCWIEDPKLGKVTLEIAILSRVEHANII 92 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCT---------TSEEEETTTEEEEHHHHHHTTCCCTTBC
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhccc---------ccccchHHHHHHHHHHHHHHhCCCCCEe
Confidence 456789999999999999999996 568899999986542110 0111122345678899999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCC-ChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNG-SLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
++++++.+.+..++||||+.+| +|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 93 ~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 93 KVLDIFENQGFFQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp CEEEEEECSSEEEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTS
T ss_pred eEEEEEeeCCEEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCC
Confidence 9999999999999999999777 99999974 45699999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
.+||+|||+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 168 ~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------- 235 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------- 235 (335)
T ss_dssp CEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------
T ss_pred cEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------
Confidence 999999999987755432 234579999999999988876 7899999999999999999999964210
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
....... ......+ .+.+++.+||+.||++|||++|+++.
T Consensus 236 ------~~~~~~~-~~~~~~~----~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 ------TVEAAIH-PPYLVSK----ELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ------GTTTCCC-CSSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ------HHhhccC-CCcccCH----HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 0111222 47889999999999999999999874
No 177
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-38 Score=344.30 Aligned_cols=253 Identities=26% Similarity=0.333 Sum_probs=197.4
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.+.|.+.+.||+|+||.||+|.. .++..||+|++.... .....+.+.+|++++++++||||+
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~hp~iv 83 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR----------------SQVPMEQIEAEIEVLKSLDHPNII 83 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG----------------CCSCHHHHHHHHHHHHTCCCTTBC
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc----------------cchhHHHHHHHHHHHHhCCCchHH
Confidence 456788899999999999999996 468899999985431 122356789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSC--KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL--- 834 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll--- 834 (1002)
++++++.+.+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~ 160 (285)
T 3is5_A 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDT 160 (285)
T ss_dssp CEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSS
T ss_pred hHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecC
Confidence 9999999999999999999999999988643 346799999999999999999999999 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHH
Q 001867 835 DGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVK 914 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~ 914 (1002)
+.++.+||+|||+++....... .....||+.|+|||++. ..++.++||||+|+++|||++|+.||..... .+...
T Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~-~~~~~ 235 (285)
T 3is5_A 161 SPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL-EEVQQ 235 (285)
T ss_dssp STTCCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHH
T ss_pred CCCCCEEEEeeecceecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH-HHHHh
Confidence 4567899999999987654322 23456899999999875 5688999999999999999999999975432 22211
Q ss_pred HHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 915 WVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... . .... ........+ .+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~---~-~~~~--~~~~~~~~~----~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 236 KATY---K-EPNY--AVECRPLTP----QAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHH---C-CCCC--CC--CCCCH----HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred hhcc---C-Cccc--ccccCcCCH----HHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 1 1010 001111222 4778999999999999999999984
No 178
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.9e-38 Score=367.23 Aligned_cols=150 Identities=27% Similarity=0.356 Sum_probs=86.4
Q ss_pred cCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccccccc
Q 001867 402 GHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVV 481 (1002)
Q Consensus 402 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 481 (1002)
..+++|++|++++|++++..| +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..| ++.+++|+.
T Consensus 240 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 313 (466)
T 1o6v_A 240 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTY 313 (466)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSE
T ss_pred hcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCE
Confidence 344444444444444443332 4444455555555555544333 4555555666666666554332 556666666
Q ss_pred ccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceee
Q 001867 482 LSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRL 561 (1002)
Q Consensus 482 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l 561 (1002)
|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++.+| +..+++|+.|++++|++
T Consensus 314 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 387 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEE
T ss_pred EECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcc
Confidence 6666666665444 55666666666666666654 356666666777777777666555 66667777777777777
Q ss_pred ec
Q 001867 562 SG 563 (1002)
Q Consensus 562 ~~ 563 (1002)
++
T Consensus 388 ~~ 389 (466)
T 1o6v_A 388 TN 389 (466)
T ss_dssp EC
T ss_pred cC
Confidence 65
No 179
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.1e-37 Score=342.28 Aligned_cols=276 Identities=18% Similarity=0.227 Sum_probs=214.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.++++++|++++.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------------~~~~~~~e~~~l~~l~~~~~i~ 68 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-------------------KHPQLHIESKIYKMMQGGVGIP 68 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-------------------SCCHHHHHHHHHHHHTTSTTCC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-------------------chhHHHHHHHHHHHhhcCCCCC
Confidence 46788899999999999999996 578999999874321 1235889999999999877666
Q ss_pred eeeEE-ecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC---C
Q 001867 761 LWCCC-TTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD---G 836 (1002)
Q Consensus 761 l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~---~ 836 (1002)
.+.++ ...+..++||||+ +++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++ .
T Consensus 69 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 143 (296)
T 3uzp_A 69 TIRWCGAEGDYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKK 143 (296)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGG
T ss_pred ccccccCCCCceEEEEEec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCC
Confidence 55555 5677889999999 99999999753 35699999999999999999999999 999999999999994 7
Q ss_pred CCCeEEccccCcccccCCCCCc-----ccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc--
Q 001867 837 DFGARVADFGVAKVVDASGKPK-----SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE-- 909 (1002)
Q Consensus 837 ~~~~kl~DfGl~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~-- 909 (1002)
++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 144 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 223 (296)
T 3uzp_A 144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK 223 (296)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS
T ss_pred CCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh
Confidence 8899999999998776543311 123557999999999999999999999999999999999999999753221
Q ss_pred hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccccCCCCCCCCCc
Q 001867 910 KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKKDGKLSP 989 (1002)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~~~~~~~~~ 989 (1002)
......+........... .....+ .++.+++.+||+.||++|||++++++.|+++...... ....|
T Consensus 224 ~~~~~~~~~~~~~~~~~~----~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~------~~~~~ 289 (296)
T 3uzp_A 224 RQKYERISEKKMSTPIEV----LCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF------SYDYV 289 (296)
T ss_dssp SSHHHHHHHHHHHSCHHH----HTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC------CSSCC
T ss_pred hhhhhhhcccccCCchHH----HHhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC------ccccc
Confidence 222222221111111000 001222 2478899999999999999999999999999765432 35567
Q ss_pred chhhcc
Q 001867 990 YYHEDA 995 (1002)
Q Consensus 990 ~~~~~~ 995 (1002)
+.|+..
T Consensus 290 ~dw~~~ 295 (296)
T 3uzp_A 290 FDWNML 295 (296)
T ss_dssp CGGGGC
T ss_pred cccccc
Confidence 878753
No 180
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.2e-38 Score=342.08 Aligned_cols=251 Identities=22% Similarity=0.267 Sum_probs=202.1
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-----------------~~~~~~~~~E~~~l~~l~h~~i~ 69 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-----------------VEDVDRFKQEIEIMKSLDHPNII 69 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-----------------CSCHHHHHHHHHHHHTCCCTTBC
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-----------------cchHHHHHHHHHHHHhCCCCCEe
Confidence 4567888999999999999999975 47799999985421 12356789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---CC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL---DG 836 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll---~~ 836 (1002)
++++++.+.+..++||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||++ +.
T Consensus 70 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 144 (277)
T 3f3z_A 70 RLYETFEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSP 144 (277)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSST
T ss_pred eEEEEEecCCeEEEEEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCC
Confidence 999999999999999999999999999875 34589999999999999999999999 99999999999999 78
Q ss_pred CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 837 DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 837 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
++.+||+|||++........ .....||+.|+|||++.+. ++.++||||+|+++|||++|+.||............
T Consensus 145 ~~~~~l~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~- 219 (277)
T 3f3z_A 145 DSPLKLIDFGLAARFKPGKM---MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI- 219 (277)
T ss_dssp TCCEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-
T ss_pred CCcEEEEecccceeccCccc---hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH-
Confidence 88999999999987654432 2345799999999987654 899999999999999999999999764332222111
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. .... .......... ..+.+++.+|++.||++|||+.++++
T Consensus 220 ~~----~~~~-~~~~~~~~~~----~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 220 RE----GTFT-FPEKDWLNVS----PQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HH----CCCC-CCHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred Hh----CCCC-CCchhhhcCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 1000 0000001122 24788999999999999999999975
No 181
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.3e-38 Score=342.74 Aligned_cols=258 Identities=24% Similarity=0.332 Sum_probs=204.5
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC----CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN----GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|++.+.||+|+||.||+|.+.+ +..||+|++.... .....+.+.+|+.++++++||||
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~i 75 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC----------------TLDNKEKFMSEAVIMKNLDHPHI 75 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS----------------CHHHHHHHHHHHHHHHHHCCTTB
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc----------------CchHHHHHHHHHHHHHhCCCCCc
Confidence 567888999999999999998643 3369999884321 23346779999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
+++++++.++ ..++||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 76 ~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 150 (281)
T 3cc6_A 76 VKLIGIIEEE-PTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPE 150 (281)
T ss_dssp CCEEEEECSS-SCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETT
T ss_pred ceEEEEEcCC-CCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCC
Confidence 9999998754 568999999999999999763 35689999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~ 917 (1002)
.+||+|||++........ .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... +....+.
T Consensus 151 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-~~~~~~~ 228 (281)
T 3cc6_A 151 CVKLGDFGLSRYIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-DVIGVLE 228 (281)
T ss_dssp EEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-GHHHHHH
T ss_pred cEEeCccCCCcccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-HHHHHHh
Confidence 999999999987654322 12234457889999999998999999999999999999998 99999754333 3332222
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
..... +.....+ ..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 229 ~~~~~--------~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 229 KGDRL--------PKPDLCP----PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HTCCC--------CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCC--------CCCCCCC----HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 21110 1111222 2478899999999999999999999999988653
No 182
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.3e-38 Score=343.23 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=200.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++.... .........+.+|+.++++++||||++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 73 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--------------LEKAGVEHQLRREVEIQSHLRHPNILR 73 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--------------HHHHTCHHHHHHHHHHHTTCCCTTBCC
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc--------------cchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 356888899999999999999965 57799999985421 112233567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 148 (279)
T 3fdn_A 74 LYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 148 (279)
T ss_dssp EEEEEECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCE
T ss_pred hhheEecCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCE
Confidence 999999999999999999999999999753 4589999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||++....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ...+..
T Consensus 149 ~l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~-- 221 (279)
T 3fdn_A 149 KIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRISR-- 221 (279)
T ss_dssp EECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHH--
T ss_pred EEEeccccccCCccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-HHHHHh--
Confidence 999999986544322 2345689999999999999999999999999999999999999975432221 111111
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.... ...... ..+.+++.+||+.||++|||++|+++.
T Consensus 222 --~~~~-----~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 222 --VEFT-----FPDFVT----EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --TCCC-----CCTTSC----HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --CCCC-----CCCcCC----HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 001122 247789999999999999999999964
No 183
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.3e-38 Score=369.91 Aligned_cols=255 Identities=24% Similarity=0.294 Sum_probs=205.9
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.++||+|+||.||+|+.+ +|+.||+|++.+.. .......+.+.+|+.++++++||||+++
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~--------------~~~~~~~~~~~~E~~iL~~l~hp~Iv~l 250 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR--------------LKKRKGYQGAMVEKKILAKVHSRFIVSL 250 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHH--------------hhhhHHHHHHHHHHHHHHhcCCCCEeeE
Confidence 56788899999999999999975 68999999985431 1122345678899999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCK--GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++.+.+..|+||||++||+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.
T Consensus 251 ~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~ 327 (543)
T 3c4z_A 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGN 327 (543)
T ss_dssp EEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSC
T ss_pred EEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCC
Confidence 999999999999999999999999987543 45799999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||+++....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||................
T Consensus 328 vkL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i 405 (543)
T 3c4z_A 328 VRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405 (543)
T ss_dssp EEECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH
T ss_pred EEEeecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH
Confidence 99999999987654322 1234579999999999999999999999999999999999999997654322222222222
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAM-----RRVV 966 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~evl 966 (1002)
... ... + ..... ..+.+++.+||+.||++||++ +++.
T Consensus 406 ~~~-~~~--~---p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~a~ei~ 447 (543)
T 3c4z_A 406 LEQ-AVT--Y---PDKFS----PASKDFCEALLQKDPEKRLGFRDGSCDGLR 447 (543)
T ss_dssp HHC-CCC--C---CTTSC----HHHHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred hhc-ccC--C---CcccC----HHHHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence 211 110 0 01122 247789999999999999975 5665
No 184
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.8e-38 Score=354.18 Aligned_cols=249 Identities=28% Similarity=0.355 Sum_probs=200.4
Q ss_pred cCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
+.|+..+.||+|+||.||+|+. .+++.||||++.... .......+.+.+|++++++++||||+++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hpniv~~ 119 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG--------------KQSNEKWQDIIKEVRFLQKLRHPNTIQY 119 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCS--------------SCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccc--------------ccchHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 3477788999999999999996 578999999985321 1133445678999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+++..++||||++ |+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 120 ~~~~~~~~~~~lv~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~k 194 (348)
T 1u5q_A 120 RGCYLREHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVK 194 (348)
T ss_dssp EEEEEETTEEEEEEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEE
T ss_pred EEEEEECCeEEEEEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEE
Confidence 999999999999999996 6888888653 35799999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY---TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS 918 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~ 918 (1002)
|+|||++...... ....||+.|+|||++. +..++.++|||||||++|||++|+.||.............
T Consensus 195 L~DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~-- 266 (348)
T 1u5q_A 195 LGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-- 266 (348)
T ss_dssp ECCCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH--
T ss_pred EeeccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH--
Confidence 9999999865432 2346999999999874 5678999999999999999999999997543322222211
Q ss_pred HhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 919 TLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
... ..... ..... ..+.+++.+||+.||++|||++++++.
T Consensus 267 --~~~-~~~~~---~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 267 --QNE-SPALQ---SGHWS----EYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --HSC-CCCCC---CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --hcC-CCCCC---CCCCC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111 11110 11122 247789999999999999999999853
No 185
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.2e-38 Score=361.41 Aligned_cols=261 Identities=22% Similarity=0.295 Sum_probs=196.0
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
.+.++|.+.+.||+|+||.||+|... +++.||||++.+.... ............+.+|+.++++++||||
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~~~~~~~E~~~l~~l~hpni 202 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFA---------IGSAREADPALNVETEIEILKKLNHPCI 202 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGT---------TC--------CCHHHHHHHHHHCCCTTB
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhc---------ccccccchhHHHHHHHHHHHHhCCCCCE
Confidence 44678999999999999999999964 5899999998653211 0011122334568999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
+++++++.. +..|+||||+++|+|.+++.. .+.+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 203 v~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 203 IKIKNFFDA-EDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp CCCCEEEES-SEEEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS
T ss_pred eeEEEEEec-CceEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC
Confidence 999999865 457999999999999999873 46799999999999999999999999 999999999999997544
Q ss_pred ---CeEEccccCcccccCCCCCcccccccccccccCcccccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhH
Q 001867 839 ---GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT---LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDL 912 (1002)
Q Consensus 839 ---~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~ 912 (1002)
.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 277 ~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~ 353 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 353 (419)
T ss_dssp SSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH
T ss_pred CcceEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH
Confidence 59999999998765432 2334579999999999853 56788999999999999999999999865554444
Q ss_pred HHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 913 VKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...+..... . ...+...... ..+.+++.+||+.||++||+++|+++
T Consensus 354 ~~~i~~~~~----~-~~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 354 KDQITSGKY----N-FIPEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHHTTCC----C-CCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhcCCC----C-CCchhhcccC----HHHHHHHHHHccCChhHCcCHHHHhC
Confidence 443322111 0 0001111222 24788999999999999999999886
No 186
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=352.89 Aligned_cols=276 Identities=23% Similarity=0.297 Sum_probs=199.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHH--HhcCCCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVET--LGKIRHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv 759 (1002)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--------------------~~~~~~~e~~~~~~~~~~h~~i~ 70 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA--------------------NRQNFINEKNIYRVPLMEHDNIA 70 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG--------------------GHHHHHHHHHHHTSTTCCCTTBC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc--------------------chhhHHHHHHHHHHHhccCcchh
Confidence 46788889999999999999987 5899999998421 12334444444 4558999999
Q ss_pred eeeeEEec-----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCCeeeCCCC
Q 001867 760 KLWCCCTT-----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDC------VPSIVHRDVK 828 (1002)
Q Consensus 760 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~~iiHrDlk 828 (1002)
++++++.. ....++||||+++|+|.+++.. ...++..++.++.|++.||+|||+.. .++|+|||||
T Consensus 71 ~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dik 147 (336)
T 3g2f_A 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLN 147 (336)
T ss_dssp CEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCS
T ss_pred hheecccccccCCCceEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccc
Confidence 99986642 2356899999999999999975 33589999999999999999999862 2389999999
Q ss_pred CCcEEECCCCCeEEccccCcccccCCCC------CcccccccccccccCcccccc-------CCCCCccchhhHHHHHHH
Q 001867 829 SNNILLDGDFGARVADFGVAKVVDASGK------PKSMSVIAGSCGYIAPEYAYT-------LRVNEKSDIYSFGVVILE 895 (1002)
Q Consensus 829 ~~NIll~~~~~~kl~DfGl~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~e 895 (1002)
|+||+++.++.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++||
T Consensus 148 p~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~e 227 (336)
T 3g2f_A 148 SRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWE 227 (336)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHH
Confidence 9999999999999999999987654321 112234569999999999876 456679999999999999
Q ss_pred HHhCCCCCCCCCCchhH-------------HHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 001867 896 LVTGRLPVDPEFGEKDL-------------VKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAM 962 (1002)
Q Consensus 896 ll~g~~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 962 (1002)
|++|+.||......... ................+.+.. ........++.+++.+||+.||++|||+
T Consensus 228 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~ 306 (336)
T 3g2f_A 228 IFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTA 306 (336)
T ss_dssp HHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC-CCCSHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred HHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc-ccccchHHHHHHHHHHHhcCChhhCcch
Confidence 99998887543322110 001111111111111111111 1122345568999999999999999999
Q ss_pred HHHHHHHHHhhhhccccCCC
Q 001867 963 RRVVKLLQEVGAENRSKTGK 982 (1002)
Q Consensus 963 ~evl~~L~~~~~~~~~~~~~ 982 (1002)
+|+++.|+++..........
T Consensus 307 ~e~l~~L~~ll~~~~~~~~~ 326 (336)
T 3g2f_A 307 QXAEERMAELMMIWERNKSV 326 (336)
T ss_dssp HHHHHHHHHHHHCCCC----
T ss_pred HHHHHHHHHHHHHHHhcccC
Confidence 99999999997654444433
No 187
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.2e-38 Score=359.39 Aligned_cols=266 Identities=22% Similarity=0.342 Sum_probs=195.6
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCc
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKN 757 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n 757 (1002)
.+.++|++.+.||+|+||.||+|.. .+++.||||++... .......+++.+|+.+++++. |||
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~---------------~~~~~~~~~~~~E~~~l~~l~~h~n 70 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA---------------FQNSTDAQRTFREIMILTELSGHEN 70 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC-----------------CCHHHHHHHHHHHHHHHHTTTCTT
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc---------------ccChHHHHHHHHHHHHHHhccCCCC
Confidence 4567899999999999999999996 46899999998432 223455677889999999997 999
Q ss_pred eeeeeeEEecCC--eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 758 IVKLWCCCTTRD--CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 758 iv~l~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
|+++++++...+ ..|+||||++ |+|.++++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 71 iv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~ 143 (388)
T 3oz6_A 71 IVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLN 143 (388)
T ss_dssp BCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC
T ss_pred CCeeeeEEecCCCCEEEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEc
Confidence 999999997544 6899999996 699999875 4689999999999999999999999 999999999999999
Q ss_pred CCCCeEEccccCcccccCCCC-------------------CcccccccccccccCcccccc-CCCCCccchhhHHHHHHH
Q 001867 836 GDFGARVADFGVAKVVDASGK-------------------PKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILE 895 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~e 895 (1002)
.++.+||+|||+++....... .......+||+.|+|||++.+ ..++.++||||+||++||
T Consensus 144 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~e 223 (388)
T 3oz6_A 144 AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGE 223 (388)
T ss_dssp TTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred CCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHH
Confidence 999999999999987643211 112334579999999999876 678999999999999999
Q ss_pred HHhCCCCCCCCCCchhHHHHHHHHhhccCccc---cc------------------cccccCCCH-------------HHH
Q 001867 896 LVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDH---VL------------------DPKLDCCFK-------------EEI 941 (1002)
Q Consensus 896 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~~~~~~-------------~~~ 941 (1002)
|++|+.||........+..... ......... +. .......++ ...
T Consensus 224 ll~g~~pf~~~~~~~~~~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (388)
T 3oz6_A 224 ILCGKPIFPGSSTMNQLERIIG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN 302 (388)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHH-HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCC
T ss_pred HHhCCCCCCCCCHHHHHHHHHH-hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCC
Confidence 9999999976543333333221 110000000 00 000000000 112
Q ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 942 CKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 942 ~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.++.+++.+||+.||++|||++|+++.
T Consensus 303 ~~~~dll~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 303 EEALDLLDKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHhhccCcccCCCHHHHhCC
Confidence 247899999999999999999999865
No 188
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.8e-38 Score=345.15 Aligned_cols=253 Identities=28% Similarity=0.396 Sum_probs=199.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|++.+.||+|+||.||+|... ++.||||++... ...+.+.+|+.++++++||||+++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------------------~~~~~~~~E~~~l~~l~h~~iv~~ 79 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-------------------ATAQAFLAEASVMTQLRHSNLVQL 79 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC-------------------C--HHHHHTHHHHTTCCCTTBCCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch-------------------hHHHHHHHHHHHHHhCCCCCEeeE
Confidence 357888899999999999999875 889999988421 134678999999999999999999
Q ss_pred eeEEecC-CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 762 WCCCTTR-DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 762 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
++++.+. +..++||||+++++|.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 156 (278)
T 1byg_A 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 156 (278)
T ss_dssp EEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred EEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcE
Confidence 9997654 5789999999999999999865444589999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++....... ....+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+....+...
T Consensus 157 ~l~Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-~~~~~~~~~~ 230 (278)
T 1byg_A 157 KVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPRVEKG 230 (278)
T ss_dssp EECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-GGHHHHHTTT
T ss_pred EEeeccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhcC
Confidence 999999998654332 23357889999999999999999999999999999998 9999975432 3322222111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
. .. +.....++ .+.+++.+||+.||++||+++|+++.|+++...
T Consensus 231 ~-----~~---~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 231 Y-----KM---DAPDGCPP----AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp C-----CC---CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C-----CC---CCcccCCH----HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 0 00 11122222 478899999999999999999999999998653
No 189
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.6e-38 Score=342.41 Aligned_cols=249 Identities=24% Similarity=0.401 Sum_probs=205.6
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
..++|++.+.||+|+||.||+|... +++.||+|++... .+.+.+|++++++++||||+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------------------~~~~~~e~~~l~~l~h~~i~ 67 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---------------------NEKAEREVKALAKLDHVNIV 67 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC---------------------SGGGHHHHHHHHHCCCTTBC
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc---------------------cHHHHHHHHHHHhCCCCCEE
Confidence 3467888999999999999999975 7899999998431 13567899999999999999
Q ss_pred eeeeEEec----------------CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 001867 760 KLWCCCTT----------------RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIV 823 (1002)
Q Consensus 760 ~l~~~~~~----------------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ii 823 (1002)
++++++.. ....++||||+++|+|.+++.......+++..++.++.|++.||+|||++ +|+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~ 144 (284)
T 2a19_B 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLI 144 (284)
T ss_dssp CEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred EEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 99998864 44579999999999999999876667899999999999999999999999 999
Q ss_pred eCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCC
Q 001867 824 HRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPV 903 (1002)
Q Consensus 824 HrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~ 903 (1002)
||||||+||+++.++.+||+|||++........ .....||+.|+|||++.+..++.++||||||+++|||++|..|+
T Consensus 145 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 221 (284)
T 2a19_B 145 NRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 221 (284)
T ss_dssp CSCCSGGGEEEEETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSH
T ss_pred eccCCHHHEEEcCCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999987755432 22346899999999999999999999999999999999999886
Q ss_pred CCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 904 DPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
... . .... ........ ..... .+.+++.+||+.||++||++.|+++.++.+..
T Consensus 222 ~~~---~---~~~~-~~~~~~~~-------~~~~~----~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 222 FET---S---KFFT-DLRDGIIS-------DIFDK----KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HHH---H---HHHH-HHHTTCCC-------TTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred hhH---H---HHHH-Hhhccccc-------ccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 321 1 1111 11111111 11122 37788999999999999999999999998864
No 190
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-38 Score=354.90 Aligned_cols=266 Identities=27% Similarity=0.353 Sum_probs=207.3
Q ss_pred cCCCcCCeeeecCCccEEEEEE-----cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-----SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++|||
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~~~~E~~~l~~l~h~~ 85 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-----------------GPDQQRDFQREIQILKALHSDF 85 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-----------------CHHHHHHHHHHHHHHHTCCCTT
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-----------------CHHHHHHHHHHHHHHHhcCCCc
Confidence 5688889999999999999984 35889999998432 3344567999999999999999
Q ss_pred eeeeeeEEe--cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 758 IVKLWCCCT--TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 758 iv~l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
|+++++++. +.+..++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 86 i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~ 161 (327)
T 3lxl_A 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVE 161 (327)
T ss_dssp BCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred eeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEEC
Confidence 999999987 4567899999999999999998633 4599999999999999999999999 999999999999999
Q ss_pred CCCCeEEccccCcccccCCCCCc-ccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCch----
Q 001867 836 GDFGARVADFGVAKVVDASGKPK-SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK---- 910 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~---- 910 (1002)
.++.+||+|||+++......... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.......
T Consensus 162 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~ 241 (327)
T 3lxl_A 162 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM 241 (327)
T ss_dssp ETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHC
T ss_pred CCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhc
Confidence 99999999999998775443221 2234468888999999998889999999999999999999999985421100
Q ss_pred ------hHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhcc
Q 001867 911 ------DLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 911 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 977 (1002)
.............. ..+.....+ ..+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 242 GCERDVPALSRLLELLEEGQ----RLPAPPACP----AEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp C----CCHHHHHHHHHHTTC----CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred ccccccccHHHHHHHhhccc----CCCCCCccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 00011111111110 011112222 347889999999999999999999999999875443
No 191
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=376.18 Aligned_cols=253 Identities=22% Similarity=0.329 Sum_probs=200.8
Q ss_pred eeeecCCccEEEEEEc---CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeeeeEEe
Q 001867 690 VIGSGSSGKVYKVVLS---NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLWCCCT 766 (1002)
Q Consensus 690 ~LG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 766 (1002)
.||+|+||.||+|.+. ++..||||+++... .....+.+.+|+.++++++|||||++++++.
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~----------------~~~~~~~~~~E~~il~~l~hpniv~l~~~~~ 406 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT----------------EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 406 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC----------------SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC----------------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEec
Confidence 7999999999999864 45679999985421 2234677999999999999999999999998
Q ss_pred cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEcccc
Q 001867 767 TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFG 846 (1002)
Q Consensus 767 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfG 846 (1002)
. +..++||||+++|+|.+++.. ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 407 ~-~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFG 481 (613)
T 2ozo_A 407 A-EALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFG 481 (613)
T ss_dssp S-SSEEEEEECCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred c-CCeEEEEEeCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeecc
Confidence 6 568999999999999999975 345699999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCCCCc-ccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhccC
Q 001867 847 VAKVVDASGKPK-SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLDQKG 924 (1002)
Q Consensus 847 l~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 924 (1002)
+++......... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+......
T Consensus 482 la~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~~~~~~i~~~~~~-- 558 (613)
T 2ozo_A 482 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAFIEQGKRM-- 558 (613)
T ss_dssp TTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-HHHHHHHHTTCCC--
T ss_pred CcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHHcCCCC--
Confidence 998765432211 1223346689999999999999999999999999999998 9999976533 3333333221110
Q ss_pred ccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 925 VDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
+....++. .+.+++..||+.||++||++++|++.|+.+....
T Consensus 559 ------~~p~~~~~----~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 559 ------ECPPECPP----ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp ------CCCTTCCH----HHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCcCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 11122333 4888999999999999999999999999986543
No 192
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=351.17 Aligned_cols=264 Identities=20% Similarity=0.268 Sum_probs=205.6
Q ss_pred cCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.++++++||||+++
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~~~~E~~~l~~l~h~~iv~~ 91 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH-----------------EQQDREEAQREADMHRLFNHPNILRL 91 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES-----------------SHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC-----------------CHHHHHHHHHHHHHHhhcCCCCeeeE
Confidence 5688899999999999999997 57899999988432 33456778999999999999999999
Q ss_pred eeEEe----cCCeeeEEEeccCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 762 WCCCT----TRDCKLLVYEYMPNGSLGDLLHSC--KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 762 ~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
++++. .....++||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 92 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~ 168 (317)
T 2buj_A 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLG 168 (317)
T ss_dssp CEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC
T ss_pred EEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEc
Confidence 99997 345789999999999999998753 346799999999999999999999999 999999999999999
Q ss_pred CCCCeEEccccCcccccCCCCCc-------ccccccccccccCccccccCC---CCCccchhhHHHHHHHHHhCCCCCCC
Q 001867 836 GDFGARVADFGVAKVVDASGKPK-------SMSVIAGSCGYIAPEYAYTLR---VNEKSDIYSFGVVILELVTGRLPVDP 905 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~ell~g~~p~~~ 905 (1002)
.++.+||+|||++.......... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||..
T Consensus 169 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 169 DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp TTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred CCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 99999999999987654221110 112345799999999987543 68899999999999999999999853
Q ss_pred CCCc-hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhccc
Q 001867 906 EFGE-KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENRS 978 (1002)
Q Consensus 906 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 978 (1002)
.... ......... .. ..+...... ..+.+++.+||+.||++||+++++++.|+++.+....
T Consensus 249 ~~~~~~~~~~~~~~-----~~---~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 249 VFQKGDSVALAVQN-----QL---SIPQSPRHS----SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp HHHTTSCHHHHHHC-----C-----CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred hhcccchhhHHhhc-----cC---CCCccccCC----HHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 1111 111111111 00 011112222 2488899999999999999999999999998754443
No 193
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.6e-38 Score=344.35 Aligned_cols=260 Identities=24% Similarity=0.310 Sum_probs=205.4
Q ss_pred cCCCcCC-eeeecCCccEEEEEE---cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDN-VIGSGSSGKVYKVVL---SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~-~LG~G~fg~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|.+.+ .||+|+||.||+|.+ .+++.||||++... ..+....+.+.+|+.++++++||||
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---------------~~~~~~~~~~~~e~~~l~~l~h~~i 80 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE---------------ANDPALKDELLAEANVMQQLDNPYI 80 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------------------CHHHHHHHHHHHHHHTCCCTTB
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccc---------------ccCHHHHHHHHHHHHHHHhCCCCCE
Confidence 4566666 899999999999964 24688999998432 1123446779999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
+++++++ ..+..++||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 81 ~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~ 154 (291)
T 1xbb_A 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQH 154 (291)
T ss_dssp CCEEEEE-ESSSEEEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred EEEEEEE-CCCCcEEEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCC
Confidence 9999999 55678999999999999999985 35699999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCCCc-ccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPK-SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~ 916 (1002)
.+||+|||++.......... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~ 233 (291)
T 1xbb_A 155 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAML 233 (291)
T ss_dssp EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHH
T ss_pred cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHH
Confidence 99999999998775543221 1223456789999999988889999999999999999999 999997543 22222222
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
.... .. +.....+ ..+.+++.+||+.||++||+++++++.|+++....
T Consensus 234 ~~~~----~~----~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 234 EKGE----RM----GCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HTTC----CC----CCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HcCC----CC----CCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 2111 00 1111222 24888999999999999999999999999986544
No 194
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=8.1e-38 Score=342.25 Aligned_cols=248 Identities=26% Similarity=0.385 Sum_probs=198.8
Q ss_pred CCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 684 GLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 684 ~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
.|.+.+.||+|+||.||+|.. .++..||+|++... .......+.+.+|+.++++++||||++++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~---------------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 91 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDR---------------KLTKSERQRFKEEAEMLKGLQHPNIVRFY 91 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGG---------------GSCHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecch---------------hhCHHHHHHHHHHHHHHHhCCCCCeeeee
Confidence 366778999999999999996 45789999998532 12344567899999999999999999999
Q ss_pred eEEec----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCCCcEEEC-
Q 001867 763 CCCTT----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPS--IVHRDVKSNNILLD- 835 (1002)
Q Consensus 763 ~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--iiHrDlk~~NIll~- 835 (1002)
+++.. ....++||||+++|+|.+++... ..+++..++.++.|++.||+|||++ + |+||||||+||+++
T Consensus 92 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~ 166 (290)
T 1t4h_A 92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITG 166 (290)
T ss_dssp EEEEEESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESS
T ss_pred eeeccccCCCceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEEC
Confidence 99865 45689999999999999999753 5689999999999999999999998 7 99999999999998
Q ss_pred CCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 836 GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
.++.+||+|||++...... ......||+.|+|||++. +.++.++||||+|+++|+|++|+.||............
T Consensus 167 ~~~~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 241 (290)
T 1t4h_A 167 PTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR 241 (290)
T ss_dssp TTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH
T ss_pred CCCCEEEeeCCCccccccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHH
Confidence 7889999999999765433 223456999999999876 45899999999999999999999999765444433332
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...... ....+ .... ..+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~----~~~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 242 VTSGVK----PASFD---KVAI----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HTTTCC----CGGGG---GCCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhccCC----ccccC---CCCC----HHHHHHHHHHccCChhhCCCHHHHhh
Confidence 221111 11111 1111 24788999999999999999999883
No 195
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3e-38 Score=347.90 Aligned_cols=263 Identities=25% Similarity=0.355 Sum_probs=205.1
Q ss_pred cCCCcCCeeeecCCccEEEEEE-----cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-----SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
+.|++.+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|+.++++++|||
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~ 84 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES----------------GGNHIADLKKEIEILRNLYHEN 84 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------------------CCHHHHHHHHHHHHTCCCTT
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc----------------cchhHHHHHHHHHHHHhCCCCC
Confidence 4577789999999999999984 358899999985321 1223567899999999999999
Q ss_pred eeeeeeEEecC--CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 758 IVKLWCCCTTR--DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 758 iv~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
|+++++++... ...++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 85 i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~ 160 (302)
T 4e5w_A 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVE 160 (302)
T ss_dssp BCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred eeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEc
Confidence 99999999876 6689999999999999999653 35699999999999999999999999 999999999999999
Q ss_pred CCCCeEEccccCcccccCCCCC-cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCC-------
Q 001867 836 GDFGARVADFGVAKVVDASGKP-KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF------- 907 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~------- 907 (1002)
.++.+||+|||++......... .......||..|+|||++.+..++.++||||+|+++|||++|+.|+....
T Consensus 161 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 240 (302)
T 4e5w_A 161 SEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI 240 (302)
T ss_dssp ETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH
T ss_pred CCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhcc
Confidence 9999999999999877654322 12234568888999999999899999999999999999999998864221
Q ss_pred ---CchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Q 001867 908 ---GEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVG 973 (1002)
Q Consensus 908 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 973 (1002)
.................. .+.....+ ..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 241 GPTHGQMTVTRLVNTLKEGKR----LPCPPNCP----DEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CSCCGGGHHHHHHHHHHTTCC----CCCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHhccCC----CCCCCCCC----HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 011111111111111110 01111222 34888999999999999999999999999864
No 196
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=354.65 Aligned_cols=261 Identities=22% Similarity=0.302 Sum_probs=195.1
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|.+.+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.++++++||||+++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------------~~~~~~~~~E~~~l~~l~h~~iv~~ 65 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE----------------EGAPCTAIREVSLLKDLKHANIVTL 65 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC----------------------CCCCCCCHHHHSCCCCTTBCCE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc----------------cccchhHHHHHHHHHhcCCCCCCee
Confidence 56888899999999999999975 689999999843211 1112234579999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+.+..++||||++ |+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 66 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~k 140 (324)
T 3mtl_A 66 HDIIHTEKSLTLVFEYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELK 140 (324)
T ss_dssp EEEEECSSCEEEEEECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEE
T ss_pred eeEEeeCCEEEEEecccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEE
Confidence 999999999999999996 6999998763 45699999999999999999999999 999999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
|+|||+++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ...+....
T Consensus 141 l~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~ 217 (324)
T 3mtl_A 141 LADFGLARAKSIPTK--TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ-LHFIFRIL 217 (324)
T ss_dssp ECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHH
T ss_pred EccCcccccccCCcc--ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHh
Confidence 999999986543322 2234568999999999876 5689999999999999999999999976543332 22222221
Q ss_pred hccC---cccccc---------cccc-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 921 DQKG---VDHVLD---------PKLD-----CCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 921 ~~~~---~~~~~~---------~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... ...... +... ...+.....+.+++.+|++.||++|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1110 000000 0000 000011234778999999999999999999986
No 197
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.3e-38 Score=353.71 Aligned_cols=253 Identities=21% Similarity=0.275 Sum_probs=199.5
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCc
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKN 757 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~n 757 (1002)
.+.++|++.+.||+|+||.||+|..+ +++.||||++.+.. ....+|++++.++ +|||
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---------------------~~~~~E~~~l~~~~~hp~ 77 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---------------------RDPTEEIEILLRYGQHPN 77 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---------------------CCCHHHHHHHHHHTTSTT
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---------------------CChHHHHHHHHHhcCCCC
Confidence 34567889999999999999999975 58899999985421 1235688888887 7999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
|+++++++.+.+..|+||||+++|+|.+++.. .+.+++..+..++.||+.||+|||++ +|+||||||+||++..+
T Consensus 78 iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~ 152 (342)
T 2qr7_A 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDE 152 (342)
T ss_dssp BCCEEEEEECSSEEEEEECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSS
T ss_pred cCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecC
Confidence 99999999999999999999999999999974 45699999999999999999999999 99999999999998543
Q ss_pred -C---CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHH
Q 001867 838 -F---GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV 913 (1002)
Q Consensus 838 -~---~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~ 913 (1002)
+ .+||+|||+++....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...
T Consensus 153 ~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~ 229 (342)
T 2qr7_A 153 SGNPESIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-TPE 229 (342)
T ss_dssp SCSGGGEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-CHH
T ss_pred CCCcCeEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-CHH
Confidence 3 499999999987654432 223457899999999998888999999999999999999999999753221 111
Q ss_pred HHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 914 KWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
....... ..... ...+....... .+.+++.+|++.||++||+++|+++
T Consensus 230 ~~~~~i~-~~~~~-~~~~~~~~~s~----~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 230 EILARIG-SGKFS-LSGGYWNSVSD----TAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHHH-HCCCC-CCSTTTTTSCH----HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHc-cCCcc-cCccccccCCH----HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2221111 11111 11111122222 4778999999999999999999985
No 198
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2e-38 Score=368.74 Aligned_cols=251 Identities=23% Similarity=0.286 Sum_probs=195.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+. .+++.||||++.+.. .........+.+|+.++++++||||++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~iv~ 212 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEV--------------IVAKDEVAHTLTENRVLQNSRHPFLTA 212 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--------------HC-------------CCCCCSCTTSCC
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhh--------------hhhhHHHHHHHHHHHHHHhCCCCeEee
Confidence 46788899999999999999996 468999999985421 112233456788999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeeCCCCCCcEEECCCCC
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHH-DCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
+++++.+.+..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.
T Consensus 213 l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~ 287 (446)
T 4ejn_A 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGH 287 (446)
T ss_dssp EEEEEEETTEEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSC
T ss_pred EEEEEeeCCEEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCC
Confidence 999999999999999999999999999753 569999999999999999999998 7 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+..
T Consensus 288 ~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~- 363 (446)
T 4ejn_A 288 IKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM- 363 (446)
T ss_dssp EEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH-
T ss_pred EEEccCCCceeccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-HHHHHHHHh-
Confidence 9999999998643322 223456799999999999999999999999999999999999999975432 222222111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-----AMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~ 967 (1002)
. ... + ..... ..+.+++.+||+.||++|| +++|+++
T Consensus 364 --~-~~~--~---p~~~~----~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 364 --E-EIR--F---PRTLG----PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --C-CCC--C---CTTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --C-CCC--C---CccCC----HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1 110 0 01122 2477899999999999999 9999985
No 199
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=9.9e-38 Score=364.49 Aligned_cols=200 Identities=26% Similarity=0.401 Sum_probs=158.7
Q ss_pred HHHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 679 YEILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 679 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
+++.++|++.+.||+|+||.||+|... +++.||||++.+. ..+....+++.+|+.++++++|||
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~---------------~~~~~~~~~~~~E~~~l~~l~h~n 113 (458)
T 3rp9_A 49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV---------------FEDLIDCKRILREIAILNRLNHDH 113 (458)
T ss_dssp CCSCTTEEECCC-------CEEEEEECC--CEEEEEEECST---------------TSSHHHHHHHHHHHHHHHHCCCTT
T ss_pred CccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh---------------hcCHHHHHHHHHHHHHHHhCCCCC
Confidence 445678999999999999999999964 6899999998432 224455678999999999999999
Q ss_pred eeeeeeEEec-----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 001867 758 IVKLWCCCTT-----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNI 832 (1002)
Q Consensus 758 iv~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NI 832 (1002)
||++++++.. ....|+||||+ +|+|.+++. ....+++..++.++.||+.||+|||++ +|+||||||+||
T Consensus 114 iv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NI 187 (458)
T 3rp9_A 114 VVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANC 187 (458)
T ss_dssp BCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGE
T ss_pred CCceEEEEecCCcccCceEEEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhE
Confidence 9999999954 35789999998 689999987 446799999999999999999999999 999999999999
Q ss_pred EECCCCCeEEccccCcccccCCCCC-------------------------cccccccccccccCcccc-ccCCCCCccch
Q 001867 833 LLDGDFGARVADFGVAKVVDASGKP-------------------------KSMSVIAGSCGYIAPEYA-YTLRVNEKSDI 886 (1002)
Q Consensus 833 ll~~~~~~kl~DfGl~~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv 886 (1002)
|++.++.+||+|||+++........ ......+||+.|+|||++ .+..++.++||
T Consensus 188 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~Di 267 (458)
T 3rp9_A 188 LVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDV 267 (458)
T ss_dssp EECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHH
T ss_pred EECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHH
Confidence 9999999999999999876533211 123455789999999976 56679999999
Q ss_pred hhHHHHHHHHHhC
Q 001867 887 YSFGVVILELVTG 899 (1002)
Q Consensus 887 wslGvil~ell~g 899 (1002)
||+||++|||++|
T Consensus 268 wSlG~il~elltg 280 (458)
T 3rp9_A 268 WSIGCIFAELLNM 280 (458)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999994
No 200
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.4e-38 Score=348.28 Aligned_cols=263 Identities=28% Similarity=0.410 Sum_probs=206.9
Q ss_pred CCcCCeeeecCCccEEEEEEc-----CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 685 LDEDNVIGSGSSGKVYKVVLS-----NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 685 ~~~~~~LG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
|++.+.||+|+||.||++.+. +++.||||++... ......+.+.+|++++++++||||+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~~iv 96 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD----------------AGPQHRSGWKQEIDILRTLYHEHII 96 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT----------------CCHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc----------------cChHHHHHHHHHHHHHHhCCCcchh
Confidence 377899999999999988652 5789999998432 1234567799999999999999999
Q ss_pred eeeeEEec--CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 760 KLWCCCTT--RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 760 ~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
++++++.+ ....++||||+++|+|.+++.. ..+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 97 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~ 170 (318)
T 3lxp_A 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDND 170 (318)
T ss_dssp CEEEEEEETTTTEEEEEECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred hEEEEEecCCCceEEEEEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCC
Confidence 99999987 4678999999999999999975 3499999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCc-ccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc-------
Q 001867 838 FGARVADFGVAKVVDASGKPK-SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE------- 909 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~------- 909 (1002)
+.+||+|||++.......... ......||..|+|||++.+..++.++||||+|+++|||++|+.||......
T Consensus 171 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~ 250 (318)
T 3lxp_A 171 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 250 (318)
T ss_dssp CCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCS
T ss_pred CCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcc
Confidence 999999999998876543221 223446788999999999988999999999999999999999998643111
Q ss_pred --hhH-HHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhcc
Q 001867 910 --KDL-VKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAENR 977 (1002)
Q Consensus 910 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 977 (1002)
... ............ ..+.....+ ..+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 251 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 251 AQGQMTVLRLTELLERGE----RLPRPDKCP----AEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp CCHHHHHHHHHHHHHTTC----CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHhccc----CCCCCcccc----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 000 000111111110 011112222 348889999999999999999999999999876544
No 201
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.6e-38 Score=340.38 Aligned_cols=262 Identities=23% Similarity=0.314 Sum_probs=206.1
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++....... .......+.+.+|+.++++++||||++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------~~~~~~~~~~~~E~~~l~~l~h~~i~~ 72 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSS-----------SRRGVSREEIEREVNILREIRHPNIIT 72 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTT-----------CSSSBCHHHHHHHHHHHHHCCCTTBCC
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccc-----------cccchHHHHHHHHHHHHHhCCCCCeee
Confidence 356888899999999999999975 68999999986542211 111223567999999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC--
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF-- 838 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~-- 838 (1002)
+++++.+.+..++||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 147 (283)
T 3bhy_A 73 LHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVP 147 (283)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSS
T ss_pred hhheecCCCeEEEEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCC
Confidence 99999999999999999999999999975 34689999999999999999999999 999999999999998877
Q ss_pred --CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 839 --GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 839 --~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
.+||+|||++........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ...+
T Consensus 148 ~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~ 223 (283)
T 3bhy_A 148 NPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNI 223 (283)
T ss_dssp SCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHH
T ss_pred CCceEEEecccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHh
Confidence 799999999987654322 2344689999999999999999999999999999999999999976432221 1111
Q ss_pred HHHhhccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH--HHHHhh
Q 001867 917 CSTLDQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK--LLQEVG 973 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~--~L~~~~ 973 (1002)
.. .... .++.. .... ..+.+++.+||+.||++||+++|+++ +++++.
T Consensus 224 ~~----~~~~--~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 224 SA----VNYD--FDEEYFSNTS----ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp HT----TCCC--CCHHHHTTCC----HHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred Hh----cccC--CcchhcccCC----HHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 11 0000 01111 1122 24778999999999999999999997 566654
No 202
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=9e-38 Score=339.63 Aligned_cols=252 Identities=23% Similarity=0.374 Sum_probs=183.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+. .+++.||||++.... .......+.+.+|+.++++++||||++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 75 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA--------------MYKAGMVQRVQNEVKIHCQLKHPSILE 75 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHTTBCCTTBCC
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh--------------hhhhhHHHHHHHHHHHHHhCCCCCeEe
Confidence 45688889999999999999997 568999999984321 111223467899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 76 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~ 151 (278)
T 3cok_A 76 LYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNI 151 (278)
T ss_dssp EEEEEECSSEEEEEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCE
T ss_pred EEEEEccCCeEEEEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCE
Confidence 99999999999999999999999999985 335799999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||++........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........... .
T Consensus 152 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----~ 224 (278)
T 3cok_A 152 KIADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK-----V 224 (278)
T ss_dssp EECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------C
T ss_pred EEEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH-----H
Confidence 9999999987653322 12235689999999999998899999999999999999999999975432221111 0
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
... +....... ...+.+++.+||+.||++|||++++++
T Consensus 225 ~~~------~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 225 VLA------DYEMPSFL---SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CSS------CCCCCTTS---CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhc------ccCCcccc---CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 000 01111111 124778999999999999999999885
No 203
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.9e-38 Score=358.08 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=186.9
Q ss_pred HHHhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 679 YEILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 679 ~~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
+++.++|++.+.||+|+||.||+|.. .+|+.||||++... .......+++.+|+.++++++|||
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~hpn 89 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP---------------FQSIIHAKRTYRELRLLKHMKHEN 89 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSST---------------TSSHHHHHHHHHHHHHHHHCCCTT
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcc---------------ccCHHHHHHHHHHHHHHHhCCCCC
Confidence 44567899999999999999999996 56899999998432 223445677889999999999999
Q ss_pred eeeeeeEEecC------CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 001867 758 IVKLWCCCTTR------DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNN 831 (1002)
Q Consensus 758 iv~l~~~~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~N 831 (1002)
|+++++++... ...|+||||+ +++|.++++. ..+++..+..++.||+.||+|||++ +|+||||||+|
T Consensus 90 Iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~N 162 (367)
T 2fst_X 90 VIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSN 162 (367)
T ss_dssp BCCCSEEECSCSSGGGCCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred CCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhh
Confidence 99999999754 5679999999 7899999864 5699999999999999999999999 99999999999
Q ss_pred EEECCCCCeEEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCch
Q 001867 832 ILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK 910 (1002)
Q Consensus 832 Ill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~ 910 (1002)
|+++.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 163 Ill~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 237 (367)
T 2fst_X 163 LAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237 (367)
T ss_dssp EEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred EEECCCCCEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999999865432 234578999999999876 678999999999999999999999997654333
Q ss_pred hHHHHHHHHhhccC------------------ccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 911 DLVKWVCSTLDQKG------------------VDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 911 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.+...... ..... ...................+.+++.+|++.||++|||++|+++.
T Consensus 238 ~l~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 238 QLKLILRL-VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHH-HCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHH-hCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 32222221 10000 00000000000000112347889999999999999999999863
No 204
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.3e-38 Score=344.79 Aligned_cols=265 Identities=22% Similarity=0.297 Sum_probs=204.5
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+.+ +++.||||++.... ......+.+.+|+.++++++||||++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~ 66 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT---------------ETEGVPSTAIREISLLKELNHPNIVK 66 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC-----------------------CCHHHHHHHHHHTTCCCTTBCC
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCc---------------cchhhHHHHHHHHHHHHHcCCCCeee
Confidence 357888899999999999999975 68999999984321 11223466889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++..++..++||||++ ++|.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 67 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~ 142 (299)
T 2r3i_A 67 LLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAI 142 (299)
T ss_dssp EEEEEEETTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred EEEEEecCCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCE
Confidence 9999999999999999996 6999999876667799999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCC-CCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLR-VNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++........ ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||......+.........
T Consensus 143 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 220 (299)
T 2r3i_A 143 KLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220 (299)
T ss_dssp EECSTTHHHHHCCCSB--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred EECcchhhhhccCCcc--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHh
Confidence 9999999987654322 223446899999999988765 7899999999999999999999997664433333333221
Q ss_pred hhccC-----cccc--cccccc----CC----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKG-----VDHV--LDPKLD----CC----FKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~-----~~~~--~~~~~~----~~----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
..... .... ..+... .. ......++.+++.+|++.||++|||++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 221 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11000 0000 000000 00 0011235788999999999999999999886
No 205
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.7e-38 Score=353.15 Aligned_cols=278 Identities=20% Similarity=0.287 Sum_probs=210.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|++.+.||+|+||.||+|.. +++.||||++.........................+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788899999999999999999 89999999996542211000000011111122233789999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhh------hhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeeCCCCCCcEEE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDL------LHSCKGGLLDWPTRYKIIVDAAEGLSYLHH-DCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~iiHrDlk~~NIll 834 (1002)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.|++.||+|||+ + +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999999 665446789999999999999999999999 8 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCCCcccccccccccccCccccccC-CCCC-ccchhhHHHHHHHHHhCCCCCCCCCCchhH
Q 001867 835 DGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-RVNE-KSDIYSFGVVILELVTGRLPVDPEFGEKDL 912 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslGvil~ell~g~~p~~~~~~~~~~ 912 (1002)
+.++.+||+|||.+...... ......||+.|+|||++.+. .++. ++||||+|+++|||++|+.||.......+.
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999876443 23345789999999999877 5666 999999999999999999999866543443
Q ss_pred HHHHHHHhhccCcc--cccccc----ccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 913 VKWVCSTLDQKGVD--HVLDPK----LDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...+.......... ....+. ...........+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 33332111100000 000000 00000111235788999999999999999999985
No 206
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=367.50 Aligned_cols=326 Identities=22% Similarity=0.189 Sum_probs=239.0
Q ss_pred ccceeeccccccCCCCCccCCCCC-cceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEcc
Q 001867 287 SLRLLDASMNDLTGPIPDDLTRLP-LESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLS 365 (1002)
Q Consensus 287 ~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 365 (1002)
+++.|+|++|++++..+..+..++ |++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 444555555555444444444443 5555555555555556666666777777777777776666667777777777777
Q ss_pred CccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCcc
Q 001867 366 NNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEI 445 (1002)
Q Consensus 366 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~ 445 (1002)
+|++++..|..|..+++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+.+..
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 77777777777777777777777777777777777777888888888888887766667777888888888888887777
Q ss_pred ccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCccccccccccc
Q 001867 446 SKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWK 525 (1002)
Q Consensus 446 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 525 (1002)
+..|..+++|+.|++++|.+.+.+|..+....+|+.|++++|++++..+..+..+++|+.|+|++|++++..+..|..++
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL 272 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCT
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccc
Confidence 77788888888888888877777777776677888888888888854446778888888888888888887778888888
Q ss_pred ccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChh-hhhhcccccccC
Q 001867 526 KLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSL-FAKEMYRNSFLG 603 (1002)
Q Consensus 526 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~ 603 (1002)
+|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..+..+ +|+.|+|++|++....+-. .........+.+
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~ 352 (477)
T 2id5_A 273 RLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR 352 (477)
T ss_dssp TCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTT
T ss_pred cCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCc
Confidence 88888888888887778888888888888888888887666667777 7888888888887665433 223334466778
Q ss_pred CCCCCCCCC
Q 001867 604 NPGLCGDLE 612 (1002)
Q Consensus 604 n~~~cg~~~ 612 (1002)
+...|+.|.
T Consensus 353 ~~~~C~~p~ 361 (477)
T 2id5_A 353 QQPTCATPE 361 (477)
T ss_dssp CCCBEEESG
T ss_pred cCceeCCch
Confidence 888887653
No 207
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=356.54 Aligned_cols=257 Identities=22% Similarity=0.259 Sum_probs=202.7
Q ss_pred cCCCcCCeeeecCCccEEEEEE----cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL----SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~n 757 (1002)
++|++.+.||+|+||.||+|+. .+++.||||++.+.... ......+.+.+|+++++++ +|||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~~~~E~~~l~~l~~h~~ 120 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-------------QKAKTTEHTRTERQVLEHIRQSPF 120 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE-------------EEESSGGGCCCHHHHHHHHHTCTT
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhh-------------hhhhHHHHHHHHHHHHHHccCCCc
Confidence 5678889999999999999997 36899999998543110 1122345577899999999 6999
Q ss_pred eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 758 IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
|+++++++...+..++||||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 121 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 195 (355)
T 1vzo_A 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSN 195 (355)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred eeEEEEEEeeCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 999999999999999999999999999999853 4699999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT--LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
+.+||+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............
T Consensus 196 ~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~ 274 (355)
T 1vzo_A 196 GHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274 (355)
T ss_dssp SCEEESCSSEEEECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHH
T ss_pred CcEEEeeCCCCeecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHH
Confidence 9999999999986643322 22334579999999999885 34789999999999999999999999765443333333
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-----AMRRVVKL 968 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 968 (1002)
......... +...... ..+.+++.+||+.||++|| +++|+++.
T Consensus 275 ~~~~~~~~~------~~~~~~~----~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 275 SRRILKSEP------PYPQEMS----ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHHCCC------CCCTTSC----HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHhccCC------CCCcccC----HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 322221110 0111122 2477899999999999999 99999864
No 208
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=340.76 Aligned_cols=257 Identities=23% Similarity=0.302 Sum_probs=202.2
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|.. .+++.||+|++..... .......+.+.+|+.++++++||||+
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~~i~ 69 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKL-------------RRIPNGEANVKKEIQLLRRLRHKNVI 69 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHH-------------HHSTTHHHHHHHHHHHHTTCCCTTBC
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccc-------------cccchhHHHHHHHHHHHHhcCCCCee
Confidence 357899999999999999999996 4688999999854211 01123457799999999999999999
Q ss_pred eeeeEEe--cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 760 KLWCCCT--TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 760 ~l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
++++++. +.+..++||||++++ |.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~ 145 (305)
T 2wtk_C 70 QLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTG 145 (305)
T ss_dssp CEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred EEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCC
Confidence 9999984 456789999999765 88888776677899999999999999999999999 99999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCC--CCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLR--VNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
+.+||+|||++................||+.|+|||++.+.. ++.++||||+|+++|||++|+.||..... ......
T Consensus 146 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~ 224 (305)
T 2wtk_C 146 GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-YKLFEN 224 (305)
T ss_dssp CCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHH
T ss_pred CcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHH
Confidence 999999999998776543333444567999999999987644 37799999999999999999999975422 222111
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
+. .... +....... .+.+++.+||+.||++|||++|+++.
T Consensus 225 i~----~~~~-----~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 225 IG----KGSY-----AIPGDCGP----PLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HH----HCCC-----CCCSSSCH----HHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred Hh----cCCC-----CCCCccCH----HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 1111 01112222 47789999999999999999999963
No 209
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.4e-38 Score=348.11 Aligned_cols=255 Identities=19% Similarity=0.252 Sum_probs=201.6
Q ss_pred hcCCCcC-CeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCce
Q 001867 682 LDGLDED-NVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNI 758 (1002)
Q Consensus 682 ~~~~~~~-~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ni 758 (1002)
.+.|.+. +.||+|+||.||+|... +++.||+|++.... ........+.+|+.+++++. ||||
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~~i 91 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR---------------RGQDCRAEILHEIAVLELAKSCPRV 91 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEE---------------TTEECHHHHHHHHHHHHHTTTCTTB
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhh---------------cchHHHHHHHHHHHHHHhccCCCCE
Confidence 3456665 88999999999999975 58999999985431 12233567899999999995 6999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECC--
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDG-- 836 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~-- 836 (1002)
+++++++.+.+..++||||+++|+|.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~ 168 (327)
T 3lm5_A 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIY 168 (327)
T ss_dssp CCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBT
T ss_pred EEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCC
Confidence 99999999999999999999999999999765567899999999999999999999999 9999999999999987
Q ss_pred -CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 837 -DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 837 -~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
++.+||+|||+++....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||............
T Consensus 169 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i 245 (327)
T 3lm5_A 169 PLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI 245 (327)
T ss_dssp TBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CCCcEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHH
Confidence 78999999999987654322 23457999999999999999999999999999999999999999765332222221
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. .. .....+....... .+.+++.+||+.||++|||++|+++
T Consensus 246 ~~-~~-----~~~~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 246 SQ-VN-----VDYSEETFSSVSQ----LATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HH-TC-----CCCCTTTTTTSCH----HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Hh-cc-----cccCchhhcccCH----HHHHHHHHHcCCChhhCcCHHHHhC
Confidence 11 10 0111111122222 4778999999999999999999985
No 210
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=8.4e-38 Score=376.64 Aligned_cols=252 Identities=25% Similarity=0.340 Sum_probs=199.9
Q ss_pred CeeeecCCccEEEEEEc---CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeeeeEE
Q 001867 689 NVIGSGSSGKVYKVVLS---NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLWCCC 765 (1002)
Q Consensus 689 ~~LG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 765 (1002)
+.||+|+||.||+|.+. .++.||||+++.. ..+....+++.+|+.++++++|||||++++++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~---------------~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 439 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE---------------ANDPALKDELLAEANVMQQLDNPYIVRMIGIC 439 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGG---------------GGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccc---------------cCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 47999999999999753 4678999998542 12334467899999999999999999999999
Q ss_pred ecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccc
Q 001867 766 TTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADF 845 (1002)
Q Consensus 766 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~Df 845 (1002)
.. +..++||||+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 440 ~~-~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DF 513 (635)
T 4fl3_A 440 EA-ESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDF 513 (635)
T ss_dssp ES-SSEEEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCT
T ss_pred ec-CCEEEEEEccCCCCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEc
Confidence 75 457899999999999999974 45699999999999999999999999 9999999999999999999999999
Q ss_pred cCcccccCCCCC-cccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcc
Q 001867 846 GVAKVVDASGKP-KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVCSTLDQK 923 (1002)
Q Consensus 846 Gl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~ 923 (1002)
|+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+......
T Consensus 514 Gla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~~~~~~i~~~~~~- 591 (635)
T 4fl3_A 514 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-SEVTAMLEKGERM- 591 (635)
T ss_dssp THHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTTCCC-
T ss_pred CCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCC-
Confidence 999877544321 22334457789999999999999999999999999999998 9999975432 2333322221111
Q ss_pred CccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 924 GVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
+....++ .++.+++..||+.||++||++++|++.|+++..
T Consensus 592 -------~~p~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 592 -------GCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -------CCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -------CCCCCCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1112223 348889999999999999999999999998754
No 211
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.2e-37 Score=345.50 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=194.7
Q ss_pred cCCCcC-CeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 683 DGLDED-NVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 683 ~~~~~~-~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
+.|++. +.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++.++ +||||+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~~~~E~~~l~~~~~h~~i~ 74 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-----------------PGHIRSRVFREVEMLYQCQGHRNVL 74 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC-----------------SSCCHHHHHHHHHHHHHTCCCTTBC
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC-----------------cchhHHHHHHHHHHHHHhcCCCCee
Confidence 456664 7899999999999995 46899999998532 122356789999999985 799999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..|+||||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 75 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 149 (316)
T 2ac3_A 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQ 149 (316)
T ss_dssp CEEEEEEETTEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSS
T ss_pred eEEEEEeeCCEEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCC
Confidence 9999999999999999999999999999853 4689999999999999999999999 9999999999999998776
Q ss_pred ---eEEccccCcccccCCCC-----CcccccccccccccCcccccc-----CCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 001867 840 ---ARVADFGVAKVVDASGK-----PKSMSVIAGSCGYIAPEYAYT-----LRVNEKSDIYSFGVVILELVTGRLPVDPE 906 (1002)
Q Consensus 840 ---~kl~DfGl~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~ell~g~~p~~~~ 906 (1002)
+||+|||++........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 150 VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp SCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 99999999986643221 111224469999999999875 55889999999999999999999999764
Q ss_pred CCch----------hHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 907 FGEK----------DLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 907 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...+ ................ ...+...... ..+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 230 CGSDCGWDRGEACPACQNMLFESIQEGKYE-FPDKDWAHIS----CAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCSCSCC----CCHHHHHHHHHHHHHCCCC-CCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccccccccccchhHHHHHHHHHhccCcc-cCchhcccCC----HHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 3221 0001111111111110 0001111122 24788999999999999999999986
No 212
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.1e-38 Score=350.66 Aligned_cols=265 Identities=23% Similarity=0.355 Sum_probs=202.1
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
..++|++.+.||+|+||.||+|+.. +++.||||++... .......+.+.+|+.++++++||||+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~h~~iv 87 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES---------------DDDKMVKKIAMREIKLLKQLRHENLV 87 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESC---------------SSCHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecC---------------CCchHHHHHHHHHHHHHhhCCCCCEe
Confidence 3577888999999999999999975 4899999998442 12344566788999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..++||||+++++|.++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~ 162 (331)
T 4aaa_A 88 NLLEVCKKKKRWYLVFEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGV 162 (331)
T ss_dssp CEEEEEEETTEEEEEEECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSC
T ss_pred eEEEEeecCCEEEEEEecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCc
Confidence 99999999999999999999988888866 345699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS 918 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~ 918 (1002)
+||+|||+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...............
T Consensus 163 ~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 240 (331)
T 4aaa_A 163 VKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240 (331)
T ss_dssp EEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred EEEEeCCCceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 99999999987654322 22345689999999998775 7899999999999999999999999766444333332221
Q ss_pred Hhh-----------ccCcccccccccc------CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 919 TLD-----------QKGVDHVLDPKLD------CCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 919 ~~~-----------~~~~~~~~~~~~~------~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
... .........+... ...+.....+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 100 0000000011110 000111235889999999999999999999885
No 213
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.8e-37 Score=361.44 Aligned_cols=217 Identities=29% Similarity=0.400 Sum_probs=174.3
Q ss_pred CCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcce
Q 001867 353 LGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVY 432 (1002)
Q Consensus 353 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 432 (1002)
+..+++|+.|++++|++++. ..+..+++|++|++++|.+++..| ++.+++|++|++++|++++. ..+..+++|+
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 246 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLT 246 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCS
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCC
Confidence 55566666666666666533 236666777777777777765544 66788888889988888754 4678889999
Q ss_pred EEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCc
Q 001867 433 LLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHAND 512 (1002)
Q Consensus 433 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 512 (1002)
.|++++|.+.+..+ +..+++|+.|++++|++++..| ++.+++|+.|++++|++++..| +..+++|+.|+|++|+
T Consensus 247 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~ 320 (466)
T 1o6v_A 247 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 320 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSC
T ss_pred EEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCc
Confidence 99999999987765 8888999999999999986544 8889999999999999986544 7889999999999999
Q ss_pred CCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCC
Q 001867 513 LSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGE 587 (1002)
Q Consensus 513 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~ 587 (1002)
+++..| ++.+++|+.|++++|.+++. ..++++++|+.|++++|++++.+| +..+ +|+.|++++|++++.
T Consensus 321 l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 321 ISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 998776 78899999999999999864 478889999999999999998777 6667 799999999999884
No 214
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.7e-38 Score=348.72 Aligned_cols=264 Identities=19% Similarity=0.230 Sum_probs=194.8
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.++++++||||+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~iv 96 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH---------------EEEGVPGTAIREVSLLKELQHRNII 96 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------------------CHHHHHHGGGCCCTTBC
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc---------------cccccchhHHHHHHHHHHcCCCCcc
Confidence 457899999999999999999996 468999999984321 1223345678999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC----
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD---- 835 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~---- 835 (1002)
++++++.+++..++||||++ |+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 97 ELKSVIHHNHRLHLIFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp CEEEEEEETTEEEEEEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC---
T ss_pred eEEEEEecCCEEEEEEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCC
Confidence 99999999999999999996 599999985 34599999999999999999999999 999999999999994
Q ss_pred -CCCCeEEccccCcccccCCCCCcccccccccccccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHH
Q 001867 836 -GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV 913 (1002)
Q Consensus 836 -~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~ 913 (1002)
.++.+||+|||+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..........
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 248 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248 (329)
T ss_dssp --CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred CccceEEECcCCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH
Confidence 445599999999987654322 23345689999999998875 48999999999999999999999997654444333
Q ss_pred HHHHHHhhccC--cccc--------ccccccCCCHH------HHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 914 KWVCSTLDQKG--VDHV--------LDPKLDCCFKE------EICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 914 ~~~~~~~~~~~--~~~~--------~~~~~~~~~~~------~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
........... .... ..+........ ...++.+++.+|++.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 249 KIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 33322110000 0000 00000000000 1135778999999999999999999874
No 215
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=8e-38 Score=349.17 Aligned_cols=252 Identities=20% Similarity=0.267 Sum_probs=199.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 759 (1002)
.++|++.+.||+|+||.||+|.. .+++.||||++.. ...+.+.+|+.++++++ ||||+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--------------------~~~~~~~~E~~~l~~l~~~~~i~ 94 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP--------------------VKKKKIKREIKILENLRGGPNII 94 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--------------------CCHHHHHHHHHHHHHHTTSTTBC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc--------------------cchHHHHHHHHHHHHcCCCCCEE
Confidence 46788899999999999999986 5689999999832 12466899999999997 99999
Q ss_pred eeeeEEec--CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 760 KLWCCCTT--RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 760 ~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
++++++.+ ....++||||+++++|.++++. +++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 95 ~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~ 166 (330)
T 3nsz_A 95 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHE 166 (330)
T ss_dssp CEEEEEECTTTCCEEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETT
T ss_pred EeeeeeccCCCCceEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCC
Confidence 99999987 6678999999999999999853 89999999999999999999999 99999999999999977
Q ss_pred C-CeEEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 838 F-GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 838 ~-~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
+ .+||+|||+++....... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||.......+....
T Consensus 167 ~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~ 243 (330)
T 3nsz_A 167 HRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243 (330)
T ss_dssp TTEEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred CCEEEEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHH
Confidence 6 899999999987654432 234578999999999877 67899999999999999999999999765443332222
Q ss_pred HHHHhhccC---------------------------ccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKG---------------------------VDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
......... ........... ....++.+++.+|++.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQH---LVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGG---GCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccc---cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111110000 00000100000 01235788999999999999999999884
No 216
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-37 Score=341.77 Aligned_cols=252 Identities=20% Similarity=0.324 Sum_probs=206.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|.+.+.||+|+||.||+|... +++.||+|++.... .......+.+.+|+.++++++||||++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~iv~ 79 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL--------------LLKPHQREKMSMEISIHRSLAHQHVVG 79 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--------------CCSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhh--------------ccCHHHHHHHHHHHHHHHhCCCCCEee
Confidence 356888899999999999999975 57899999985421 123455678999999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 154 (294)
T 2rku_A 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEV 154 (294)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred eeeeeccCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCE
Confidence 999999999999999999999999998753 4699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||++........ ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||............ .
T Consensus 155 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~ 228 (294)
T 2rku_A 155 KIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----K 228 (294)
T ss_dssp EECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----H
T ss_pred EEEeccCceecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----h
Confidence 9999999987654322 223456899999999999989999999999999999999999999764322221111 1
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
..... + ..... ..+.+++.+||+.||++|||++|+++.
T Consensus 229 -~~~~~--~---~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 229 -KNEYS--I---PKHIN----PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -TTCCC--C---CTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -hccCC--C---ccccC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11100 0 01122 247789999999999999999999863
No 217
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8e-38 Score=339.64 Aligned_cols=250 Identities=26% Similarity=0.375 Sum_probs=195.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|.+.+.||+|+||.||+|... +++.||||++.... .......+.+.+|+.++++++||||++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 75 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK--------------IRSLDVVGKIKREIQNLKLFRHPHIIK 75 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc--------------ccchhHHHHHHHHHHHHhcCCCCCEeE
Confidence 357888899999999999999975 68999999985421 112233567899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++...+..++||||+++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 76 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 150 (276)
T 2h6d_A 76 LYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNA 150 (276)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCE
T ss_pred EEEEEecCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCE
Confidence 999999999999999999999999999753 4589999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||++........ .....||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||..... ......+..
T Consensus 151 ~l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~- 225 (276)
T 2h6d_A 151 KIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-PTLFKKIRG- 225 (276)
T ss_dssp EECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH-
T ss_pred EEeecccccccCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHhhc-
Confidence 9999999987654322 224468999999999987765 5899999999999999999999975422 222221111
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
... ....... ..+.+++.+||+.||++|||++|+++
T Consensus 226 ---~~~-----~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 226 ---GVF-----YIPEYLN----RSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ---CCC-----CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---Ccc-----cCchhcC----HHHHHHHHHHccCChhhCCCHHHHHh
Confidence 100 0001122 24778999999999999999999986
No 218
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.1e-37 Score=347.42 Aligned_cols=265 Identities=21% Similarity=0.274 Sum_probs=200.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... .......+.+|+.++++++||||++
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~~~~~E~~~l~~l~h~~iv~ 80 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---------------KEGFPITALREIKILQLLKHENVVN 80 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC---------------SSSSCHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc---------------cccchHHHHHHHHHHHhccCCCccc
Confidence 46788899999999999999997 5689999999844311 1222456789999999999999999
Q ss_pred eeeEEec--------CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 001867 761 LWCCCTT--------RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNI 832 (1002)
Q Consensus 761 l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NI 832 (1002)
+++++.. .+..|+||||++ |+|.+.+.. ....+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NI 155 (351)
T 3mi9_A 81 LIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANV 155 (351)
T ss_dssp EEEEEEEC--------CEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred HhheeeccccccccCCceEEEEEeccC-CCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHE
Confidence 9999986 456899999996 588777765 335699999999999999999999999 999999999999
Q ss_pred EECCCCCeEEccccCcccccCCCC--CcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 833 LLDGDFGARVADFGVAKVVDASGK--PKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 833 ll~~~~~~kl~DfGl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
+++.++.+||+|||+++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 156 l~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 235 (351)
T 3mi9_A 156 LITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 235 (351)
T ss_dssp EECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred EEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 999999999999999987653322 122345578999999998876 45799999999999999999999999765433
Q ss_pred hhHHHHHHHHhhccCccc--ccc-----------ccccCCCHHH------HHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 910 KDLVKWVCSTLDQKGVDH--VLD-----------PKLDCCFKEE------ICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~--~~~-----------~~~~~~~~~~------~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... .+........... ..+ ........+. ...+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 236 HQLA-LISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHH-HHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHH-HHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 3222 2222111110000 000 0000000111 124778999999999999999999886
No 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.4e-37 Score=356.82 Aligned_cols=202 Identities=25% Similarity=0.273 Sum_probs=175.2
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC------C
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI------R 754 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~ 754 (1002)
..+|++.+.||+|+||.||+|... +++.||||++.. .......+.+|+.+++.+ +
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~------------------~~~~~~~~~~E~~~l~~l~~~~~~~ 157 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN------------------EKRFHRQAAEEIRILEHLRKQDKDN 157 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS------------------CHHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC------------------ccchHHHHHHHHHHHHHHhhccccC
Confidence 457888999999999999999864 588999999843 223345677888888776 5
Q ss_pred CCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 755 HKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 755 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
|+||+++++++...+..++||||++ ++|.+++.......+++..++.++.||+.||+|||++ +|+||||||+||++
T Consensus 158 ~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl 233 (429)
T 3kvw_A 158 TMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILL 233 (429)
T ss_dssp CSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEE
T ss_pred CcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEE
Confidence 7899999999999999999999995 7999999876667799999999999999999999999 99999999999999
Q ss_pred CCCCC--eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCch
Q 001867 835 DGDFG--ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK 910 (1002)
Q Consensus 835 ~~~~~--~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~ 910 (1002)
+.++. +||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 234 ~~~~~~~vkL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 306 (429)
T 3kvw_A 234 KQQGRSGIKVIDFGSSCYEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306 (429)
T ss_dssp SSTTSCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ccCCCcceEEeecccceecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 99887 9999999997654332 24578999999999999999999999999999999999999997664433
No 220
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.7e-37 Score=348.95 Aligned_cols=259 Identities=25% Similarity=0.352 Sum_probs=205.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.+.||+|+||.||+|... +|+.||||++...... ..........+.+.+|+.+++++ +||||+
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~---------~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 163 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAER---------LSPEQLEEVREATRRETHILRQVAGHPHII 163 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSC---------CCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---------cCHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 467889999999999999999975 6999999998543211 00011123356788999999999 799999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++...+..|+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 164 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 164 TLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp CEEEEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 9999999999999999999999999999753 4699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCcccccc------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT------LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV 913 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~ 913 (1002)
+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....
T Consensus 239 ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~ 314 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-ILML 314 (365)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHH
T ss_pred EEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-HHHH
Confidence 99999999987765432 234579999999998863 3578899999999999999999999975422 2222
Q ss_pred HHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 914 KWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
..+... ... ...+...... ..+.+++.+||+.||++|||++|+++
T Consensus 315 ~~i~~~----~~~-~~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 315 RMIMEG----QYQ-FSSPEWDDRS----STVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHT----CCC-CCHHHHSSSC----HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhC----CCC-CCCcccccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 221111 110 0011112222 24788999999999999999999986
No 221
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=349.20 Aligned_cols=264 Identities=27% Similarity=0.382 Sum_probs=206.9
Q ss_pred cCCCcCCeeeecCCccEEEEEE-----cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-----SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++|||
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~~~~E~~~l~~l~h~~ 103 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----------------TEEHLRDFEREIEILKSLQHDN 103 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC-----------------CSHHHHHHHHHHHHHHTCCCTT
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC-----------------CHHHHHHHHHHHHHHHhCCCCC
Confidence 4678889999999999999984 36889999998432 2344667999999999999999
Q ss_pred eeeeeeEEecCC--eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 758 IVKLWCCCTTRD--CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 758 iv~l~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
|+++++++...+ ..++||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 104 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~ 179 (326)
T 2w1i_A 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVE 179 (326)
T ss_dssp BCCEEEEECC----CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEE
T ss_pred eeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEc
Confidence 999999987654 789999999999999999863 35699999999999999999999999 999999999999999
Q ss_pred CCCCeEEccccCcccccCCCCCcc-cccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc-----
Q 001867 836 GDFGARVADFGVAKVVDASGKPKS-MSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE----- 909 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~----- 909 (1002)
.++.+||+|||++........... .....++..|+|||++.+..++.++||||||+++|||++|..|+......
T Consensus 180 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~ 259 (326)
T 2w1i_A 180 NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259 (326)
T ss_dssp ETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHH
T ss_pred CCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhh
Confidence 999999999999987755432111 22345777899999999888999999999999999999999987532100
Q ss_pred ------hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 910 ------KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 910 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
......+......... .+.....+ ..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 260 GNDKQGQMIVFHLIELLKNNGR----LPRPDGCP----DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCC----CCCCTTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHhhcCCC----CCCCCccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0000011111111100 01112222 3488899999999999999999999999998653
No 222
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-37 Score=364.97 Aligned_cols=255 Identities=26% Similarity=0.329 Sum_probs=203.6
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
.+.++|++.++||+|+||+||+|... +++.||||++.+... .......+.+|++++++++||||
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~~~~E~~~l~~l~hpni 83 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA---------------KNKDTSTILREVELLKKLDHPNI 83 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH---------------BCSCHHHHHHHHHHHHHCCCTTB
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc---------------cchHHHHHHHHHHHHHhCCCCCc
Confidence 34577889999999999999999974 689999999854211 12235678999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC---
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD--- 835 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~--- 835 (1002)
+++++++.+.+..|+||||+++|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 84 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~ 158 (486)
T 3mwu_A 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKE 158 (486)
T ss_dssp CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSS
T ss_pred CeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCC
Confidence 99999999999999999999999999988753 4699999999999999999999999 999999999999995
Q ss_pred CCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 836 GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
.++.+||+|||+++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+....
T Consensus 159 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~ 233 (486)
T 3mwu_A 159 KDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKR 233 (486)
T ss_dssp TTCCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHH
T ss_pred CCCCEEEEECCcCeECCCCCc---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHH
Confidence 456799999999987654322 234579999999999875 589999999999999999999999976532 222222
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
+.... .. ...+....... .+.+++.+||+.||++|||+.|+++.
T Consensus 234 i~~~~----~~-~~~~~~~~~s~----~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 234 VETGK----YA-FDLPQWRTISD----DAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHTC----CC-SCSGGGGGSCH----HHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HHhCC----CC-CCCcccCCCCH----HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22111 11 00111222222 47789999999999999999999963
No 223
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.8e-37 Score=346.61 Aligned_cols=251 Identities=20% Similarity=0.321 Sum_probs=206.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|.+.+.||+|+||.||+|... +++.||+|++... ........+.+.+|+.++++++||||++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~--------------~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 105 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKS--------------LLLKPHQREKMSMEISIHRSLAHQHVVG 105 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGG--------------GCCSHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechh--------------hhcCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 356888899999999999999975 4789999998542 1223455678999999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 106 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 180 (335)
T 2owb_A 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEV 180 (335)
T ss_dssp EEEEEECSSEEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCE
T ss_pred EEEEEecCCeEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCE
Confidence 999999999999999999999999998753 5699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..............
T Consensus 181 kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--- 255 (335)
T 2owb_A 181 KIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK--- 255 (335)
T ss_dssp EECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---
T ss_pred EEeeccCceecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhc---
Confidence 9999999987654322 22345799999999999999999999999999999999999999975432222221111
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... +. .... ..+.+++.+||+.||++||+++|+++
T Consensus 256 --~~~~--~~---~~~~----~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 256 --NEYS--IP---KHIN----PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp --TCCC--CC---TTSC----HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --CCCC--CC---ccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1100 00 1122 24778999999999999999999986
No 224
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.7e-37 Score=342.19 Aligned_cols=251 Identities=25% Similarity=0.327 Sum_probs=202.1
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|.+.+.||+|+||.||+|+.. +|+.||+|++... .....+.+.+|+.++++++||||+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~i~ 69 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS-----------------PAFRDSSLENEIAVLKKIKHENIV 69 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------------------HHHHHHHHHHHCCCTTBC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecc-----------------cccchHHHHHHHHHHHhCCCCCee
Confidence 4567888999999999999999975 6899999998532 112245688999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---CC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL---DG 836 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll---~~ 836 (1002)
++++++.+.+..++||||+++++|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||++ +.
T Consensus 70 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~ 144 (304)
T 2jam_A 70 TLEDIYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEE 144 (304)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSST
T ss_pred ehhhhcccCCEEEEEEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCC
Confidence 9999999999999999999999999998753 4689999999999999999999999 99999999999999 77
Q ss_pred CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 837 DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 837 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
++.+||+|||++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+
T Consensus 145 ~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i 219 (304)
T 2jam_A 145 NSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKI 219 (304)
T ss_dssp TCCEEBCSCSTTCCCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHH
T ss_pred CCCEEEccCCcceecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHH
Confidence 889999999999764332 22344689999999999999999999999999999999999999975432 2222221
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. ... ....+.....+ ..+.+++.+|++.||++||+++|+++
T Consensus 220 ~~----~~~-~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 220 KE----GYY-EFESPFWDDIS----ESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HH----CCC-CCCTTTTTTSC----HHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred Hc----CCC-CCCccccccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 111 11111112222 24788999999999999999999986
No 225
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.7e-38 Score=345.26 Aligned_cols=262 Identities=30% Similarity=0.409 Sum_probs=186.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++++++||||++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~~ 77 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK----------------CQTSMDELLKEIQAMSQCHHPNIVS 77 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC--------------------------------CCCCCCCTTBCC
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh----------------cchhHHHHHHHHHHHhhcCCCCEee
Confidence 46788999999999999999985 468999999874321 1223456889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhc------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSC------KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
+++++...+..++||||+++++|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 78 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~ 154 (303)
T 2vwi_A 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILL 154 (303)
T ss_dssp EEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEE
T ss_pred EEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEE
Confidence 999999999999999999999999998742 345699999999999999999999999 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCCC---cccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCch
Q 001867 835 DGDFGARVADFGVAKVVDASGKP---KSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK 910 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~ 910 (1002)
+.++.+||+|||++......... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.......
T Consensus 155 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 234 (303)
T 2vwi_A 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK 234 (303)
T ss_dssp CTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred cCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh
Confidence 99999999999999876543211 11234568999999999876 568999999999999999999999997654333
Q ss_pred hHHHHHHHHhhccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 911 DLVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
....... ...........++.. ..... .+.+++.+||+.||++||+++|+++
T Consensus 235 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 235 VLMLTLQ-NDPPSLETGVQDKEMLKKYGK----SFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HHHHHHT-SSCCCTTC-----CCCCCCCH----HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhc-cCCCccccccccchhhhhhhH----HHHHHHHHHccCChhhCcCHHHHhh
Confidence 2222111 110000011111111 22222 4778999999999999999999985
No 226
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.2e-37 Score=366.56 Aligned_cols=253 Identities=28% Similarity=0.378 Sum_probs=205.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||||++.+.. .......+.+.+|+.++++++||||++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hpniv~ 90 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ--------------VKQKTDKESLLREVQLLKQLDHPNIMK 90 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--------------CCBSSCHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhh--------------cccchHHHHHHHHHHHHHhCCCCCCCc
Confidence 457888999999999999999975 68999999985431 112334677999999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---CCC
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL---DGD 837 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll---~~~ 837 (1002)
+++++.+.+..|+||||+++|+|.+++.. .+.+++..++.++.|++.||+|||++ +|+||||||+||++ +.+
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 165 (484)
T 3nyv_A 91 LYEFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKD 165 (484)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTT
T ss_pred EEEEEEeCCEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCC
Confidence 99999999999999999999999999874 45699999999999999999999999 99999999999999 567
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+.+||+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+....+.
T Consensus 166 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~ 240 (484)
T 3nyv_A 166 ANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVE 240 (484)
T ss_dssp CCEEECCTTHHHHBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH
T ss_pred CcEEEEeeeeeEEccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH
Confidence 899999999998775543 2334579999999998866 689999999999999999999999976432 22222222
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. ... ...+......+ .+.+++.+||+.||++|||++|+++
T Consensus 241 ~~----~~~-~~~~~~~~~s~----~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 241 KG----KYT-FELPQWKKVSE----SAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HC----CCC-CCSGGGGGSCH----HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cC----CCC-CCCcccccCCH----HHHHHHHHHCCCChhHCcCHHHHhh
Confidence 11 111 01111122222 4778999999999999999999985
No 227
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1e-37 Score=340.31 Aligned_cols=249 Identities=22% Similarity=0.367 Sum_probs=203.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+.+|++++++++||||++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 78 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--------------LEKEGVEHQLRREIEIQSHLRHPNILR 78 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH--------------HHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc--------------cchHHHHHHHHHHHHHHhcCCCCCEee
Confidence 356888899999999999999975 57889999985421 111223467899999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+++|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 79 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 153 (284)
T 2vgo_A 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGEL 153 (284)
T ss_dssp EEEEEECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCE
T ss_pred EEEEEEcCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCE
Confidence 999999999999999999999999999853 4589999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||++....... .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ ...+ .
T Consensus 154 kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~---~ 225 (284)
T 2vgo_A 154 KIADFGWSVHAPSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-HRRI---V 225 (284)
T ss_dssp EECCCTTCEECSSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHH---H
T ss_pred EEecccccccCcccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-HHHH---h
Confidence 999999997654322 2345689999999999999999999999999999999999999975432221 1111 1
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
. ... .+. .... ..+.+++.+|++.||++||+++|+++
T Consensus 226 ~-~~~--~~~---~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 226 N-VDL--KFP---PFLS----DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp T-TCC--CCC---TTSC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c-ccc--CCC---CcCC----HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1 100 001 1122 24778999999999999999999986
No 228
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.2e-38 Score=341.13 Aligned_cols=258 Identities=23% Similarity=0.337 Sum_probs=204.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+.+|+.++++++||||++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~ 69 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS---------------MTEAEKQMLVSEVNLLRELKHPNIVR 69 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT---------------CCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEccc---------------CCHHHHHHHHHHHHHHHhcCCCCCCe
Confidence 457888899999999999999975 68999999985421 12345678999999999999999999
Q ss_pred eeeEEe--cCCeeeEEEeccCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-----eeeCCCCCCc
Q 001867 761 LWCCCT--TRDCKLLVYEYMPNGSLGDLLHSCK--GGLLDWPTRYKIIVDAAEGLSYLHHDCVPS-----IVHRDVKSNN 831 (1002)
Q Consensus 761 l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-----iiHrDlk~~N 831 (1002)
+++++. ..+..++||||+++++|.+++.... ...+++..++.++.|++.||+|||++ + |+||||||+|
T Consensus 70 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~N 146 (279)
T 2w5a_A 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPAN 146 (279)
T ss_dssp EEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGG
T ss_pred EEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhh
Confidence 999885 4678899999999999999987532 35699999999999999999999998 7 9999999999
Q ss_pred EEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchh
Q 001867 832 ILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD 911 (1002)
Q Consensus 832 Ill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~ 911 (1002)
|+++.++.+||+|||+++...... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ..+
T Consensus 147 Il~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~ 223 (279)
T 2w5a_A 147 VFLDGKQNVKLGDFGLARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-QKE 223 (279)
T ss_dssp EEECSSSCEEECCCCHHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHH
T ss_pred EEEcCCCCEEEecCchheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC-HHH
Confidence 999999999999999998765432 12234568999999999999899999999999999999999999997542 222
Q ss_pred HHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Q 001867 912 LVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEV 972 (1002)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 972 (1002)
....+.. ..... ...... ..+.+++.+||+.||++||+++|+++.+...
T Consensus 224 ~~~~i~~----~~~~~----~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 224 LAGKIRE----GKFRR----IPYRYS----DELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp HHHHHHH----TCCCC----CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred HHHHHhh----ccccc----CCcccC----HHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 2222211 11111 111222 2478899999999999999999999865443
No 229
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.8e-37 Score=357.79 Aligned_cols=263 Identities=19% Similarity=0.257 Sum_probs=208.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC-Ccee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH-KNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv 759 (1002)
.++|++.++||+|+||.||+|+. .+++.||||++... ....++.+|+++++.++| +++.
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-------------------~~~~~~~~E~~il~~L~~~~~i~ 66 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-------------------TKHPQLLYESKIYRILQGGTGIP 66 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETT-------------------CSSCCHHHHHHHHHHTTTSTTCC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccc-------------------cccHHHHHHHHHHHHhcCCCCCC
Confidence 46788999999999999999996 56899999987432 112357899999999986 6666
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE---CC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL---DG 836 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll---~~ 836 (1002)
.+..++...+..++||||+ +++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+|||+ +.
T Consensus 67 ~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~ 141 (483)
T 3sv0_A 67 NVRWFGVEGDYNVLVMDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRR 141 (483)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGG
T ss_pred eEEEEEeeCCEEEEEEECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCC
Confidence 7777777888999999999 99999999753 35699999999999999999999999 99999999999999 58
Q ss_pred CCCeEEccccCcccccCCCCC-----cccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchh
Q 001867 837 DFGARVADFGVAKVVDASGKP-----KSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD 911 (1002)
Q Consensus 837 ~~~~kl~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~ 911 (1002)
++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~ 221 (483)
T 3sv0_A 142 ANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK 221 (483)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH
T ss_pred CCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH
Confidence 889999999999877654322 122356799999999999999999999999999999999999999976433221
Q ss_pred H--HHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 912 L--VKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 912 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
. ...+........ +.......+. ++.+++..||+.+|++||++++|++.|+++....
T Consensus 222 ~~~~~~i~~~~~~~~----~~~l~~~~p~----~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 222 KQKYEKISEKKVATS----IEALCRGYPT----EFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHHHHHHHHHHHHSC----HHHHHTTSCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhcccccc----HHHHhcCCcH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1 111111111111 1111122222 4788999999999999999999999999986533
No 230
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.9e-37 Score=351.50 Aligned_cols=261 Identities=24% Similarity=0.278 Sum_probs=194.7
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
.+.++|++.+.||+|+||.||+|... +++.||||++... .......+.+.+|+.+++.++||||
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~hpni 86 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---------------FQNQTHAKRAYRELVLMKCVNHKNI 86 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECT---------------TSSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccc---------------cCChHHHHHHHHHHHHHHhcCCCCc
Confidence 34578899999999999999999964 6889999998532 1234456778899999999999999
Q ss_pred eeeeeEEecCC------eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcE
Q 001867 759 VKLWCCCTTRD------CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNI 832 (1002)
Q Consensus 759 v~l~~~~~~~~------~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NI 832 (1002)
+++++++...+ ..|+||||++ |+|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||
T Consensus 87 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NI 158 (371)
T 2xrw_A 87 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNI 158 (371)
T ss_dssp CCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cceEEeeccccccccccceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHE
Confidence 99999998665 7899999996 58888885 3489999999999999999999999 999999999999
Q ss_pred EECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhH
Q 001867 833 LLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDL 912 (1002)
Q Consensus 833 ll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~ 912 (1002)
+++.++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 159 l~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 235 (371)
T 2xrw_A 159 VVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 235 (371)
T ss_dssp EECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred EEcCCCCEEEEEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999999999998765432 223457899999999999999999999999999999999999999765332222
Q ss_pred HHHHHHHhhcc--------------------C-----cc----ccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 001867 913 VKWVCSTLDQK--------------------G-----VD----HVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMR 963 (1002)
Q Consensus 913 ~~~~~~~~~~~--------------------~-----~~----~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 963 (1002)
...+. ..... . .. ....+............+.+++.+|++.||++|||++
T Consensus 236 ~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~ 314 (371)
T 2xrw_A 236 NKVIE-QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 314 (371)
T ss_dssp HHHHC--CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHHH-HhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHH
Confidence 22111 00000 0 00 0000000001112245688999999999999999999
Q ss_pred HHHH
Q 001867 964 RVVK 967 (1002)
Q Consensus 964 evl~ 967 (1002)
|+++
T Consensus 315 e~l~ 318 (371)
T 2xrw_A 315 EALQ 318 (371)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 9986
No 231
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.4e-38 Score=341.74 Aligned_cols=246 Identities=21% Similarity=0.310 Sum_probs=197.5
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.+.||+|+||.||+|... +++.||+|++.... ........+.+|+..+.++ +||||+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~e~~~~~~l~~h~~iv 74 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL---------------AGSVDEQNALREVYAHAVLGQHSHVV 74 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCC---------------TTSHHHHHHHHHHHHHHHSCSCTTBC
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccc---------------cccHHHHHHHHHHHHHHHhCCCCCee
Confidence 467888999999999999999975 78999999985431 1233466788999999999 899999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCK--GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
++++++.+++..++||||+++++|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 75 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~ 151 (289)
T 1x8b_A 75 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRT 151 (289)
T ss_dssp CEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--
T ss_pred eeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCC
Confidence 99999999999999999999999999997643 26699999999999999999999999 99999999999999844
Q ss_pred -------------------CCeEEccccCcccccCCCCCcccccccccccccCccccccC-CCCCccchhhHHHHHHHHH
Q 001867 838 -------------------FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELV 897 (1002)
Q Consensus 838 -------------------~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell 897 (1002)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 225 (289)
T 1x8b_A 152 SIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAA 225 (289)
T ss_dssp ------------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHT
T ss_pred CCCcccccccccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHh
Confidence 479999999998765432 23589999999998766 5668999999999999999
Q ss_pred hCCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 898 TGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 898 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+|..|+... ... ..+. ...... ....... .+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~---~~~-~~~~----~~~~~~----~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 226 GAEPLPRNG---DQW-HEIR----QGRLPR----IPQVLSQ----EFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp TCCCCCSSS---HHH-HHHH----TTCCCC----CSSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCCCCcch---hHH-HHHH----cCCCCC----CCcccCH----HHHHHHHHHhCCCcccCCCHHHHhh
Confidence 998776432 111 1111 111111 1112222 4788999999999999999999875
No 232
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.7e-37 Score=363.93 Aligned_cols=258 Identities=23% Similarity=0.321 Sum_probs=201.5
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.+.|++.+.||+|+||.||+|+.+ +++.||+|++.+... .......+.+|+.++++++||||+
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---------------~~~~~~~~~~E~~~l~~l~hpniv 99 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV---------------STSSNSKLLEEVAVLKLLDHPNIM 99 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC--------------------CTTHHHHHHHHHHTTCCCTTBC
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc---------------CchHHHHHHHHHHHHHhCCCCCCC
Confidence 3456888999999999999999975 688999999854311 122346688999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC--
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD-- 837 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~-- 837 (1002)
++++++.+.+..|+||||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++..
T Consensus 100 ~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~ 174 (494)
T 3lij_A 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEK 174 (494)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSST
T ss_pred eEEEEEEeCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCC
Confidence 9999999999999999999999999988753 5699999999999999999999999 99999999999999764
Q ss_pred -CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 838 -FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 838 -~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
+.+||+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... .+....+
T Consensus 175 ~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i 249 (494)
T 3lij_A 175 DALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-QEILRKV 249 (494)
T ss_dssp TCCEEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH
T ss_pred CCcEEEEECCCCeECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHH
Confidence 459999999998765432 233457999999999876 5689999999999999999999999976533 2222222
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH--HHHHh
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK--LLQEV 972 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~--~L~~~ 972 (1002)
.... . ....+....... .+.+++.+||+.||++|||++|+++ ++.+.
T Consensus 250 ~~~~----~-~~~~~~~~~~s~----~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 250 EKGK----Y-TFDSPEWKNVSE----GAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHTC----C-CCCSGGGTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HhCC----C-CCCchhcccCCH----HHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 2111 1 111122222333 4778999999999999999999985 35444
No 233
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.4e-38 Score=343.85 Aligned_cols=261 Identities=26% Similarity=0.367 Sum_probs=198.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEc--CCc--EEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS--NGE--AVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|++.+.||+|+||.||+|++. +++ .||||++.... .......+.+.+|+.++++++||||
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i 83 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDV--------------LSQPEAMDDFIREVNAMHSLDHRNL 83 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC----------------------CHHHHHHHHHHHHHHHCCCTTB
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCc--------------cCCHHHHHHHHHHHHHHHhCCCCCc
Confidence 56888899999999999999853 233 68999874321 1123456789999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
+++++++.... .++||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 84 ~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~ 158 (291)
T 1u46_A 84 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRD 158 (291)
T ss_dssp CCEEEEECSSS-CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETT
T ss_pred ccEEEEEccCC-ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCC
Confidence 99999998765 88999999999999999763 35689999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCCCc-ccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPK-SMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~ 916 (1002)
.+||+|||++.......... ......+|..|+|||++.+..++.++||||+|+++|||++ |+.||..... .+....+
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~ 237 (291)
T 1u46_A 159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILHKI 237 (291)
T ss_dssp EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHH
T ss_pred CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-HHHHHHH
Confidence 99999999998775543222 1234457889999999998889999999999999999999 9999975432 2222211
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhh
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGA 974 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 974 (1002)
. ... .. .+.....+ ..+.+++.+||+.||++|||++++++.|+++.+
T Consensus 238 ~---~~~-~~---~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 238 D---KEG-ER---LPRPEDCP----QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp H---TSC-CC---CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred H---ccC-CC---CCCCcCcC----HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 1 111 00 11112222 347889999999999999999999999998864
No 234
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-37 Score=348.57 Aligned_cols=268 Identities=21% Similarity=0.256 Sum_probs=200.1
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +|+.||||++...... .......+.+.+|+.++++++||||++
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~~~~~E~~~l~~l~h~~iv~ 76 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS------------EAKDGINRTALREIKLLQELSHPNIIG 76 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------------------CTHHHHHHHHHHHCCCTTBCC
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcc------------hhhhhhhHHHHHHHHHHhhCCCCCCCe
Confidence 467899999999999999999964 5899999998543111 001122346889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+++ +|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 77 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 151 (346)
T 1ua2_A 77 LLDAFGHKSNISLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVL 151 (346)
T ss_dssp EEEEECCTTCCEEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred EEEEEeeCCceEEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCE
Confidence 99999999999999999964 89888875 335689999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
||+|||+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|..||........+.......
T Consensus 152 kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~ 229 (346)
T 1ua2_A 152 KLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL 229 (346)
T ss_dssp EECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred EEEecccceeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHc
Confidence 9999999987654322 22345789999999998754 58899999999999999999999987654444433333322
Q ss_pred hhcc--Cccc---ccc----ccccCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 920 LDQK--GVDH---VLD----PKLDCCF-----KEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 920 ~~~~--~~~~---~~~----~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
.... .... ..+ ......+ .....++.+++.+|++.||++|||++|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 230 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1110 0000 000 0000001 1112358899999999999999999999864
No 235
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.6e-37 Score=342.43 Aligned_cols=260 Identities=23% Similarity=0.309 Sum_probs=199.6
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|... +++.||||++...... ............+.+|++++++++||||+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 78 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA---------IGSAREADPALNVETEIEILKKLNHPCII 78 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC------------------------CHHHHHHHHHHCCCTTBC
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhh---------hcccccchhhhhHHHHHHHHHhCCCCCCc
Confidence 4567889999999999999999974 5789999998543110 00111223345688999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++..++ .|+||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 79 ~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 152 (322)
T 2ycf_A 79 KIKNFFDAED-YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 152 (322)
T ss_dssp CEEEEEESSS-EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSS
T ss_pred eEeeEEcCCc-eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCC
Confidence 9999997765 8999999999999999873 45799999999999999999999999 9999999999999987654
Q ss_pred ---eEEccccCcccccCCCCCcccccccccccccCccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHH
Q 001867 840 ---ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY---TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV 913 (1002)
Q Consensus 840 ---~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~ 913 (1002)
+||+|||+++..... .......||+.|+|||++. ...++.++|||||||++|+|++|+.||..........
T Consensus 153 ~~~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 229 (322)
T 2ycf_A 153 DCLIKITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229 (322)
T ss_dssp SCCEEECCCTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHH
T ss_pred CCeEEEccCccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHH
Confidence 999999999876432 2223456899999999864 5678899999999999999999999997655444444
Q ss_pred HHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 914 KWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
..+..... .. ......... ..+.+++.+||+.||++||+++|+++
T Consensus 230 ~~~~~~~~----~~-~~~~~~~~~----~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 230 DQITSGKY----NF-IPEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHHTCC----CC-CHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHhCcc----cc-CchhhhhcC----HHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 33322111 00 000011122 34788999999999999999999984
No 236
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.8e-37 Score=350.61 Aligned_cols=200 Identities=27% Similarity=0.438 Sum_probs=174.9
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~iv~~ 96 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----------------KPAIRNQIIRELQVLHECNSPYIVGF 96 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC----------------CHHHHHHHHHHHGGGGGCCCTTBCCE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc----------------CHHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 56888899999999999999975 68999999985421 23456779999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+++..++||||+++++|.+++... +.+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+|
T Consensus 97 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~k 172 (360)
T 3eqc_A 97 YGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIK 172 (360)
T ss_dssp EEEEEETTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEE
T ss_pred eEEEEECCEEEEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEE
Confidence 99999999999999999999999999853 45899999999999999999999831 799999999999999999999
Q ss_pred EccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPE 906 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~ 906 (1002)
|+|||++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 173 l~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 173 LCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp ECCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred EEECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999997654321 22347899999999999999999999999999999999999999754
No 237
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-37 Score=353.59 Aligned_cols=257 Identities=23% Similarity=0.243 Sum_probs=194.0
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLW 762 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 762 (1002)
.+|++.+.||+|+||.||+|+..++..||+|++.... ....+|+++++.++||||++++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---------------------~~~~~E~~il~~l~h~niv~l~ 98 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---------------------RFKNRELQIMRIVKHPNVVDLK 98 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT---------------------TSCCHHHHHHHTCCCTTBCCEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---------------------chHHHHHHHHHhCCCCCcceEE
Confidence 4688889999999999999998877789999884321 1123699999999999999999
Q ss_pred eEEecCC------eeeEEEeccCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 763 CCCTTRD------CKLLVYEYMPNGSLGDLLHS--CKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 763 ~~~~~~~------~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
+++...+ ..++||||++++ +.+.+.. .....+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 99 ~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill 174 (394)
T 4e7w_A 99 AFFYSNGDKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLL 174 (394)
T ss_dssp EEEEEESSSSSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEEEecCCCCCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEE
Confidence 9996543 378999999764 4443321 2346799999999999999999999999 99999999999999
Q ss_pred C-CCCCeEEccccCcccccCCCCCcccccccccccccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCchhH
Q 001867 835 D-GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDL 912 (1002)
Q Consensus 835 ~-~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~ 912 (1002)
+ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+.+
T Consensus 175 ~~~~~~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l 251 (394)
T 4e7w_A 175 DPPSGVLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL 251 (394)
T ss_dssp ETTTTEEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred cCCCCcEEEeeCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 8 789999999999987654432 2244689999999998765 5899999999999999999999999876544444
Q ss_pred HHHHHHHhhc---------cCccccccccccC------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 913 VKWVCSTLDQ---------KGVDHVLDPKLDC------CFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 913 ~~~~~~~~~~---------~~~~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...+...... .......-+.... .......++.+++.+||+.||++|||+.|+++
T Consensus 252 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 252 VEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 4333211000 0000000000000 00011235889999999999999999999986
No 238
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.4e-37 Score=345.52 Aligned_cols=253 Identities=23% Similarity=0.328 Sum_probs=196.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHH-HhcCCCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVET-LGKIRHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv 759 (1002)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......++..|+.+ ++.++||||+
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~e~~~~~~~~~h~~iv 113 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV----------------NSQEQKRLLMDLDISMRTVDCPFTV 113 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCC----------------CCHHHHHHHHHHHHHHTTCCCTTTC
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEecccc----------------CcHHHHHHHHHHHHHHhhcCCCcEE
Confidence 35678889999999999999996 568999999984321 11233445556555 7778999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSC--KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
++++++.+++..|+||||++ |+|.+++... ....+++..++.++.|++.||+|||++ .+|+||||||+||+++.+
T Consensus 114 ~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~ 190 (340)
T 3an0_A 114 TFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINAL 190 (340)
T ss_dssp CEEEEEECSSCEEEEECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECST
T ss_pred EEeeEEEeCCcEEEEHHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCC
Confidence 99999999999999999996 5999988742 456799999999999999999999974 289999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCccccc----cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY----TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV 913 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~ 913 (1002)
+.+||+|||+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||..........
T Consensus 191 ~~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~ 267 (340)
T 3an0_A 191 GQVKMCDFGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL 267 (340)
T ss_dssp TCEEECCCSHHHHHSCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH
T ss_pred CCEEEeeCCCceecccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHH
Confidence 99999999999876432 1223457999999999964 3468899999999999999999999997543322221
Q ss_pred HHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 914 KWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. ...... ..... .... .++.+++.+||+.||++||+++|+++
T Consensus 268 ~~---~~~~~~-~~~~~---~~~~----~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 268 KQ---VVEEPS-PQLPA---DKFS----AEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HH---HHHSCC-CCCCG---GGSC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HH---HhcCCC-CCCCc---ccCC----HHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11 111111 11000 1122 24788999999999999999999986
No 239
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8e-37 Score=335.26 Aligned_cols=251 Identities=26% Similarity=0.364 Sum_probs=196.7
Q ss_pred cCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|.....||+|+||.||+|.. .+++.||||++... +....+.+.+|+.++++++||||+++
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~iv~~ 84 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-----------------DSRYSQPLHEEIALHKHLKHKNIVQY 84 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC-----------------CC---HHHHHHHHHHHTCCCTTBCCE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC-----------------chHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 3455567999999999999996 46889999998432 22335678999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECC-CCC
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKG-GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDG-DFG 839 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~-~~~ 839 (1002)
++++...+..++||||+++++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 161 (295)
T 2clq_A 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGV 161 (295)
T ss_dssp EEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCC
T ss_pred eeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCC
Confidence 9999999999999999999999999986432 3567999999999999999999999 9999999999999987 899
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCC--CCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLR--VNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~ 917 (1002)
+||+|||++........ ......||+.|+|||++.+.. ++.++||||||+++|+|++|+.||........... .
T Consensus 162 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~ 237 (295)
T 2clq_A 162 LKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF--K 237 (295)
T ss_dssp EEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH--H
T ss_pred EEEeecccccccCCCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH--h
Confidence 99999999987654321 223456899999999987643 78999999999999999999999964322221111 1
Q ss_pred HHhhccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 918 STLDQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
..... ..+.. .... ..+.+++.+||+.||++||+++|+++
T Consensus 238 ~~~~~------~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 238 VGMFK------VHPEIPESMS----AEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHC------CCCCCCTTSC----HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred hcccc------ccccccccCC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11100 01111 1222 24778999999999999999999985
No 240
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.6e-38 Score=357.49 Aligned_cols=249 Identities=16% Similarity=0.135 Sum_probs=192.1
Q ss_pred cCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHH---HHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVE---TLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~---~l~~l~h~ni 758 (1002)
++|++.+.||+|+||.||+|.. .+|+.||||++.... .......+.+.+|+. ++++++||||
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~~l~hpni 138 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTE--------------RPPSNAIKQMKEEVLRLRLLRGIKNQKQ 138 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC---------------CCTTHHHHHHHHHHGGGGSTTCCSHHH
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecc--------------ccchHHHHHHHHHHHHHHhccccCCHHH
Confidence 5678889999999999999995 568999999985421 123345677999995 4555579999
Q ss_pred eeee-------eEEecCCe-----------------eeEEEeccCCCChhhhhhhcCC-----CCCCHHHHHHHHHHHHH
Q 001867 759 VKLW-------CCCTTRDC-----------------KLLVYEYMPNGSLGDLLHSCKG-----GLLDWPTRYKIIVDAAE 809 (1002)
Q Consensus 759 v~l~-------~~~~~~~~-----------------~~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~ 809 (1002)
|+++ +++.+.+. .|+||||+ +|+|.+++..... ..+++..++.++.||+.
T Consensus 139 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~ 217 (377)
T 3byv_A 139 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIR 217 (377)
T ss_dssp HHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHH
Confidence 9998 66665532 78999999 6899999985321 12335888899999999
Q ss_pred HHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccC-----------
Q 001867 810 GLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL----------- 878 (1002)
Q Consensus 810 ~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------- 878 (1002)
||+|||++ +|+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+.
T Consensus 218 aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~ 288 (377)
T 3byv_A 218 LLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRT 288 (377)
T ss_dssp HHHHHHHT---TEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEE
T ss_pred HHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccc
Confidence 99999999 999999999999999999999999999986432 2234567 999999999887
Q ss_pred CCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCC
Q 001867 879 RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPIN 958 (1002)
Q Consensus 879 ~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 958 (1002)
.++.++|||||||++|||++|+.||........ ...+ .+.....++ .+.+++.+||+.||++
T Consensus 289 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~-------------~~~~-~~~~~~~~~----~~~~li~~~L~~dp~~ 350 (377)
T 3byv_A 289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGG-------------SEWI-FRSCKNIPQ----PVRALLEGFLRYPKED 350 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHHHSSCCC------CC-------------SGGG-GSSCCCCCH----HHHHHHHHHTCSSGGG
T ss_pred cCChhhhHHHHHHHHHHHHHCCCCCcccccccc-------------hhhh-hhhccCCCH----HHHHHHHHHcCCCchh
Confidence 899999999999999999999999964322111 1111 111122232 4788999999999999
Q ss_pred CCCHHHHHH--HHHHhh
Q 001867 959 RPAMRRVVK--LLQEVG 973 (1002)
Q Consensus 959 Rps~~evl~--~L~~~~ 973 (1002)
|||+.|+++ +++++.
T Consensus 351 Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 351 RLLPLQAMETPEYEQLR 367 (377)
T ss_dssp CCCHHHHHTSHHHHHHH
T ss_pred CCCHHHHhhChHHHHHH
Confidence 999999985 555554
No 241
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=339.57 Aligned_cols=250 Identities=24% Similarity=0.348 Sum_probs=198.5
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.+.|++.+.||+|+||.||+|... +|+.||+|++... ...+.+.+|+.++++++||||++
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-------------------~~~~~~~~e~~~l~~l~h~~i~~ 88 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-------------------SDLQEIIKEISIMQQCDSPHVVK 88 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT-------------------SCCHHHHHHHHHHHTCCCTTBCC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch-------------------HHHHHHHHHHHHHHhCCCCCCcc
Confidence 467888999999999999999975 5899999998432 12356889999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++...+..++||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 89 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 164 (314)
T 3com_A 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHA 164 (314)
T ss_dssp EEEEEEETTEEEEEEECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCE
T ss_pred EEEEEEeCCEEEEEeecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCE
Confidence 99999999999999999999999999874 345799999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||++........ ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.......... .. .
T Consensus 165 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~---~ 238 (314)
T 3com_A 165 KLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MI---P 238 (314)
T ss_dssp EECCCTTCEECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HH---H
T ss_pred EEeecccchhhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HH---h
Confidence 9999999987654322 2234568999999999999999999999999999999999999997543222111 11 1
Q ss_pred hccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 921 DQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. ...... ...... ..+.+++.+||+.||++|||++++++
T Consensus 239 ~~-~~~~~~--~~~~~~----~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 239 TN-PPPTFR--KPELWS----DNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HS-CCCCCS--SGGGSC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cC-CCcccC--CcccCC----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11 100000 011112 24788999999999999999999985
No 242
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.7e-37 Score=348.34 Aligned_cols=263 Identities=21% Similarity=0.259 Sum_probs=202.3
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|... +++.||||++... ......+.+.+|++++++++||||+
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~niv 88 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF----------------EHQTYCQRTLREIKILLRFRHENII 88 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT----------------TCHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc----------------cCcHHHHHHHHHHHHHHhcCCCCCc
Confidence 3467889999999999999999964 6889999998431 1234457789999999999999999
Q ss_pred eeeeEEecC-----CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 760 KLWCCCTTR-----DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 760 ~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
++++++... ...|+||||++ |+|.+++.. ..+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 89 ~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~ 161 (364)
T 3qyz_A 89 GINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLL 161 (364)
T ss_dssp CCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred cceeEEecCCccccceEEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEE
Confidence 999999754 46899999996 699999874 4599999999999999999999999 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCCCc-ccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhH
Q 001867 835 DGDFGARVADFGVAKVVDASGKPK-SMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDL 912 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~ 912 (1002)
+.++.+||+|||+++......... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+..
T Consensus 162 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 241 (364)
T 3qyz_A 162 NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241 (364)
T ss_dssp CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH
T ss_pred CCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH
Confidence 999999999999998765432211 1234579999999998654 45899999999999999999999999766444433
Q ss_pred HHHHHHHhhccCcc---------------cccccc---ccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 913 VKWVCSTLDQKGVD---------------HVLDPK---LDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~---------------~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
........ ..... ....+. .....+....++.+++.+|++.||++|||++|+++
T Consensus 242 ~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 242 NHILGILG-SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHC-SCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhC-CCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 33221110 00000 000000 00000111234789999999999999999999986
No 243
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=346.93 Aligned_cols=257 Identities=24% Similarity=0.321 Sum_probs=188.1
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCceee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIVK 760 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~ 760 (1002)
.+|++.++||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++++. ||||++
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~~~~e~~~l~~l~~h~~iv~ 90 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN-----------------EEEKNRAIIQEVCFMKKLSGHPNIVQ 90 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES-----------------SHHHHHHHHHHHHHHHHHTTSTTBCC
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC-----------------chHHHHHHHHHHHHHHHhccCCChhh
Confidence 36788899999999999999964 6899999988432 2344667899999999996 999999
Q ss_pred eeeEEe--------cCCeeeEEEeccCCCChhhhhhhc-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeeCCCCC
Q 001867 761 LWCCCT--------TRDCKLLVYEYMPNGSLGDLLHSC-KGGLLDWPTRYKIIVDAAEGLSYLHHDCVPS--IVHRDVKS 829 (1002)
Q Consensus 761 l~~~~~--------~~~~~~lv~e~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--iiHrDlk~ 829 (1002)
+++++. .....++||||++ |+|.+++... ..+.+++..++.++.|++.||+|||++ + |+||||||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp 166 (337)
T 3ll6_A 91 FCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKV 166 (337)
T ss_dssp EEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCG
T ss_pred ccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCc
Confidence 999994 3445799999995 7999988652 345799999999999999999999998 8 99999999
Q ss_pred CcEEECCCCCeEEccccCcccccCCCCCc----------ccccccccccccCcccc---ccCCCCCccchhhHHHHHHHH
Q 001867 830 NNILLDGDFGARVADFGVAKVVDASGKPK----------SMSVIAGSCGYIAPEYA---YTLRVNEKSDIYSFGVVILEL 896 (1002)
Q Consensus 830 ~NIll~~~~~~kl~DfGl~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslGvil~el 896 (1002)
+||+++.++.+||+|||+++......... ......||+.|+|||++ .+..++.++|||||||++|||
T Consensus 167 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el 246 (337)
T 3ll6_A 167 ENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246 (337)
T ss_dssp GGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHH
T ss_pred ccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHH
Confidence 99999999999999999998775432211 11244689999999998 566788999999999999999
Q ss_pred HhCCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 897 VTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 897 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
++|+.||....... ....... .+.....+. .+.+++.+||+.||++||+++|+++.|+++.+..
T Consensus 247 ~~g~~p~~~~~~~~----~~~~~~~--------~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 247 CFRQHPFEDGAKLR----IVNGKYS--------IPPHDTQYT----VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp HHSSCCC----------------CC--------CCTTCCSSG----GGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HhCCCCCcchhHHH----hhcCccc--------CCcccccch----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 99999996432211 1111110 011111111 3678899999999999999999999999987643
No 244
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.9e-37 Score=336.67 Aligned_cols=249 Identities=26% Similarity=0.368 Sum_probs=204.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.+.|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.++++++||||++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~~ 84 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE----------------AEDEIEDIQQEITVLSQCDSPYVTK 84 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT----------------CSTTHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc----------------cHHHHHHHHHHHHHHHhCCCCCEeE
Confidence 35688889999999999999986 468899999985421 1223567999999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..++||||+++++|.+++.. ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 158 (303)
T 3a7i_A 85 YYGSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEV 158 (303)
T ss_dssp EEEEEEETTEEEEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEEecCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCE
Confidence 99999999999999999999999999963 5699999999999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+|||++........ ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+..
T Consensus 159 kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~-- 233 (303)
T 3a7i_A 159 KLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-MKVLFLIPK-- 233 (303)
T ss_dssp EECCCTTCEECBTTBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHH--
T ss_pred EEeecccceecCcccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-HHHHHHhhc--
Confidence 9999999987654322 22345789999999999999999999999999999999999999965422 222211111
Q ss_pred hccCccccccccc-cCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 921 DQKGVDHVLDPKL-DCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 921 ~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
... +.. ..... .+.+++.+||+.||++|||++|+++.
T Consensus 234 --~~~-----~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 234 --NNP-----PTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp --SCC-----CCCCSSCCH----HHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred --CCC-----CCCccccCH----HHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111 111 12222 47789999999999999999999874
No 245
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.2e-37 Score=348.96 Aligned_cols=273 Identities=21% Similarity=0.219 Sum_probs=198.4
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
+.++|++.+.||+|+||.||+|...+|+.||||++....... -......+....+.+.+|+.++++++||||++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDG------RTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTT------SCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCcc------chhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 357899999999999999999998889999999986532211 00011223344578999999999999999999
Q ss_pred eeeEEec-----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 761 LWCCCTT-----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 761 l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
+++++.. ....|+||||++ |+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 9999954 346799999996 788888874 345799999999999999999999999 999999999999999
Q ss_pred CCCCeEEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHH
Q 001867 836 GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVK 914 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~ 914 (1002)
.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...........
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp TTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred CCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 99999999999997544332 2234578999999998876 6789999999999999999999999976543332222
Q ss_pred HHHHHhhc------------------cCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 915 WVCSTLDQ------------------KGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 915 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
........ ...............+.....+.+++.+|++.||++|||++|+++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 22111000 000000000000011111234788999999999999999999985
No 246
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-37 Score=354.03 Aligned_cols=263 Identities=23% Similarity=0.255 Sum_probs=198.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+|+++++.++||||++
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~---------------------~~~~~~E~~il~~l~hpnIv~ 64 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD---------------------PRYKNRELDIMKVLDHVNIIK 64 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECC---------------------TTSCCHHHHHHTTCCCTTBCC
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecC---------------------cchHHHHHHHHHHcCCCCccc
Confidence 35788899999999999999996 56899999998432 111236999999999999999
Q ss_pred eeeEEec--------------------------------------CCeeeEEEeccCCCChhhhhhh--cCCCCCCHHHH
Q 001867 761 LWCCCTT--------------------------------------RDCKLLVYEYMPNGSLGDLLHS--CKGGLLDWPTR 800 (1002)
Q Consensus 761 l~~~~~~--------------------------------------~~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~ 800 (1002)
+++++.. ....++||||++ |+|.+.+.. .....+++..+
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~ 143 (383)
T 3eb0_A 65 LVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLI 143 (383)
T ss_dssp EEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHH
T ss_pred hhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHH
Confidence 9999954 334889999997 688777764 24567999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC-CCCCeEEccccCcccccCCCCCcccccccccccccCccccccC-
Q 001867 801 YKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD-GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL- 878 (1002)
Q Consensus 801 ~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~-~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~- 878 (1002)
+.++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||++.+.
T Consensus 144 ~~i~~qi~~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~ 217 (383)
T 3eb0_A 144 SIYIYQLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGAT 217 (383)
T ss_dssp HHHHHHHHHHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCC
Confidence 99999999999999999 999999999999997 688999999999987654432 2244689999999988765
Q ss_pred CCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc---------cCccccccccccC------CCHHHHHH
Q 001867 879 RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQ---------KGVDHVLDPKLDC------CFKEEICK 943 (1002)
Q Consensus 879 ~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~------~~~~~~~~ 943 (1002)
.++.++||||+||++|||++|+.||......+.....+...... .......-+.... .+......
T Consensus 218 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (383)
T 3eb0_A 218 EYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL 297 (383)
T ss_dssp SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHH
T ss_pred CCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHH
Confidence 48999999999999999999999998765444444333211100 0000000010000 00111234
Q ss_pred HHHHHHHcCCCCCCCCCCHHHHHH--HHHHh
Q 001867 944 VLNIGLLCTSPLPINRPAMRRVVK--LLQEV 972 (1002)
Q Consensus 944 l~~l~~~cl~~dP~~Rps~~evl~--~L~~~ 972 (1002)
+.+++.+||+.||++|||+.|+++ +++++
T Consensus 298 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 298 AIDLLEQILRYEPDLRINPYEAMAHPFFDHL 328 (383)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred HHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence 789999999999999999999984 44444
No 247
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=9.3e-37 Score=339.92 Aligned_cols=264 Identities=22% Similarity=0.263 Sum_probs=202.1
Q ss_pred hcCCCcCCeeeecCCccEEEEEE--cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC---CCC
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL--SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI---RHK 756 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~ 756 (1002)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .......+.+|+.+++++ +||
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~~~~e~~~l~~l~~~~h~ 74 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG---------------EEGMPLSTIREVAVLRHLETFEHP 74 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC---------------TTSCBCTHHHHHHHHHHHHHTCCT
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcc---------------cccCCchhhHHHHHHHhhhccCCC
Confidence 36788899999999999999997 3578999999854311 111223466777777766 899
Q ss_pred ceeeeeeEEe-----cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 001867 757 NIVKLWCCCT-----TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNN 831 (1002)
Q Consensus 757 niv~l~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~N 831 (1002)
||+++++++. .....++||||++ |+|.+++.......+++..++.++.|++.||+|||++ +|+||||||+|
T Consensus 75 ~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~N 150 (326)
T 1blx_A 75 NVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQN 150 (326)
T ss_dssp TBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred CeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHH
Confidence 9999999997 5667899999996 7999999876666799999999999999999999999 99999999999
Q ss_pred EEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchh
Q 001867 832 ILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD 911 (1002)
Q Consensus 832 Ill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~ 911 (1002)
|+++.++.+||+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 151 ili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 227 (326)
T 1blx_A 151 ILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227 (326)
T ss_dssp EEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred eEEcCCCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 999999999999999998654321 23345789999999999999999999999999999999999999976543333
Q ss_pred HHHHHHHHhhcc--Ccc-------ccc----cccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 912 LVKWVCSTLDQK--GVD-------HVL----DPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 912 ~~~~~~~~~~~~--~~~-------~~~----~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
............ ... ... ..............+.+++.+||+.||++|||++|+++
T Consensus 228 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 228 LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 333222111000 000 000 00000111111234778999999999999999999984
No 248
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.2e-37 Score=335.69 Aligned_cols=260 Identities=25% Similarity=0.313 Sum_probs=205.0
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 759 (1002)
.++|++.+.||+|+||.||+|..+ +++.||||++....... ..........+.+.+|+.+++++. ||||+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~ 87 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGS--------FSAEEVQELREATLKEVDILRKVSGHPNII 87 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTT--------CCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccc--------cCHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 467888999999999999999975 68899999985431100 000112334567889999999996 99999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++...+..++||||+++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~ 162 (298)
T 1phk_A 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMN 162 (298)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred eeeeeeccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCc
Confidence 9999999999999999999999999999853 5699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccc------cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY------TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV 913 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~ 913 (1002)
+||+|||++........ .....||+.|+|||++. ...++.++||||+|+++|||++|+.||..... ....
T Consensus 163 ~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~ 238 (298)
T 1phk_A 163 IKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLML 238 (298)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHH
T ss_pred EEEecccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-HHHH
Confidence 99999999987654332 23456899999999875 45688999999999999999999999975432 2222
Q ss_pred HHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 914 KWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
..+... ... ...+...... ..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~----~~~-~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 239 RMIMSG----NYQ-FGSPEWDDYS----DTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHT----CCC-CCTTTGGGSC----HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHhcC----Ccc-cCcccccccC----HHHHHHHHHHccCCcccCCCHHHHHh
Confidence 221111 111 1111112222 24788999999999999999999875
No 249
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=343.08 Aligned_cols=251 Identities=25% Similarity=0.372 Sum_probs=195.4
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.+.|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.+++++ +||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~------------------~~~~~~~~~e~~~l~~l~~h~~i~ 84 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT------------------GDEEEEIKQEINMLKKYSHHRNIA 84 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC------------------SSTTHHHHHHHHHHHHHCCSTTBC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC------------------cccHHHHHHHHHHHHhccCCCCee
Confidence 46788899999999999999997 46899999998432 12245788999999998 799999
Q ss_pred eeeeEEec------CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 001867 760 KLWCCCTT------RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNIL 833 (1002)
Q Consensus 760 ~l~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIl 833 (1002)
++++++.. .+..++||||+++|+|.+++...+...+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl 161 (326)
T 2x7f_A 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVL 161 (326)
T ss_dssp CEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEE
T ss_pred eeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEE
Confidence 99999986 46789999999999999999876667799999999999999999999999 9999999999999
Q ss_pred ECCCCCeEEccccCcccccCCCCCcccccccccccccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCCC
Q 001867 834 LDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY-----TLRVNEKSDIYSFGVVILELVTGRLPVDPEFG 908 (1002)
Q Consensus 834 l~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~ell~g~~p~~~~~~ 908 (1002)
++.++.+||+|||++........ ......||+.|+|||++. +..++.++|||||||++|+|++|+.||.....
T Consensus 162 ~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 239 (326)
T 2x7f_A 162 LTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 239 (326)
T ss_dssp ECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred EcCCCCEEEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999987654321 223446899999999987 56788999999999999999999999965432
Q ss_pred chhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 909 EKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...... . . ......... ..... .+.+++.+||+.||++||+++++++
T Consensus 240 ~~~~~~-~---~-~~~~~~~~~---~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 240 MRALFL-I---P-RNPAPRLKS---KKWSK----KFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHH-H---H-HSCCCCCSC---SCSCH----HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHH-h---h-cCccccCCc---cccCH----HHHHHHHHHhccChhhCCCHHHHhh
Confidence 222111 1 1 111111111 12222 4778999999999999999999986
No 250
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=346.24 Aligned_cols=261 Identities=21% Similarity=0.349 Sum_probs=198.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.++|++.+.||+|+||.||+|...+ .||+|++..... .....+.+.+|+.++++++||||+++
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~---------------~~~~~~~~~~e~~~l~~l~h~~iv~~ 94 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERD---------------NEDQLKAFKREVMAYRQTRHENVVLF 94 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSC---------------CCCCCCCCCTTGGGGTTCCCTTBCCC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCC---------------CHHHHHHHHHHHHHHhcCCCCCEeEE
Confidence 3678889999999999999999753 599999854211 12223457789999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.+.+..++||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++ ++.+|
T Consensus 95 ~~~~~~~~~~~iv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~ 169 (319)
T 2y4i_B 95 MGACMSPPHLAIITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVV 169 (319)
T ss_dssp CEEEECSSCEEEECBCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCE
T ss_pred EEEEecCCceEEEeecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEE
Confidence 9999999999999999999999999975 335699999999999999999999999 999999999999998 67999
Q ss_pred EccccCcccccCCCC---CcccccccccccccCcccccc---------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 842 VADFGVAKVVDASGK---PKSMSVIAGSCGYIAPEYAYT---------LRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
|+|||+++....... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||......
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 249 (319)
T 2y4i_B 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249 (319)
T ss_dssp ECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH
T ss_pred EeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999876542211 122234468999999998874 35788999999999999999999999754322
Q ss_pred hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 910 KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
.....+.. ........ ...+. .+.+++.+||+.||++|||++++++.|+++....
T Consensus 250 -~~~~~~~~----~~~~~~~~---~~~~~----~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 250 -AIIWQMGT----GMKPNLSQ---IGMGK----EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -HHHHHHHT----TCCCCCCC---SSCCT----THHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -HHHHHhcc----CCCCCCCc---CCCCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 22211111 11111111 11122 3778999999999999999999999999986543
No 251
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.6e-37 Score=374.95 Aligned_cols=251 Identities=26% Similarity=0.353 Sum_probs=203.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCcee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIV 759 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 759 (1002)
.++|++.++||+|+||.||+|+.+ +++.||||++.+.. .......+.+..|..++..+ +||+|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~--------------~~~~~~~~~~~~E~~~l~~~~~~~~i~ 405 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV--------------VIQDDDVECTMVEKRVLALPGKPPFLT 405 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHH--------------HHHTTTTHHHHHHHHHHTCTTCCTTBC
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccc--------------cccHHHHHHHHHHHHHHHhccCCCeEE
Confidence 467888999999999999999965 57889999985431 11223456688899999988 699999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++.+.+..|+||||+++|+|.++++.. +.+++..++.++.||+.||+|||++ +||||||||+|||++.++.
T Consensus 406 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ 480 (674)
T 3pfq_A 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 480 (674)
T ss_dssp CEEEECBCSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSC
T ss_pred EEEEEEEeCCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCc
Confidence 9999999999999999999999999999853 4699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCST 919 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~ 919 (1002)
+||+|||+++....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+
T Consensus 481 ikL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-~~~~~~i--- 554 (674)
T 3pfq_A 481 IKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSI--- 554 (674)
T ss_dssp EEECCCTTCEECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH---
T ss_pred EEEeecceeeccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-HHHHHHH---
Confidence 99999999986433322 23456799999999999999999999999999999999999999976432 2222221
Q ss_pred hhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Q 001867 920 LDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAM-----RRVVK 967 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~evl~ 967 (1002)
.. .... + | .... .++.+++.+|++.||++||++ +||.+
T Consensus 555 ~~-~~~~--~-p--~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 555 ME-HNVA--Y-P--KSMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HS-SCCC--C-C--TTSC----HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred Hh-CCCC--C-C--ccCC----HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11 1110 0 0 1122 247889999999999999997 66653
No 252
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.7e-37 Score=340.26 Aligned_cols=253 Identities=23% Similarity=0.304 Sum_probs=197.5
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
..+.|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++++++||||+
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~i~ 79 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-----------------SEEELEDYIVEIEILATCDHPYIV 79 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC---------------------CCHHHHHHHHHHHHHCCCTTBC
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC-----------------CHHHHHHHHHHHHHHhcCCCCCEe
Confidence 3467888999999999999999975 5889999998432 122356789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++++...+..++||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 155 (302)
T 2j7t_A 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGD 155 (302)
T ss_dssp CEEEEEECC-CEEEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSC
T ss_pred eeeeeeeeCCeEEEEEEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCC
Confidence 9999999999999999999999999998753 35699999999999999999999999 9999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCcccc-----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYA-----YTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVK 914 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~ 914 (1002)
+||+|||++....... .......||+.|+|||++ .+..++.++||||||+++|+|++|+.||...........
T Consensus 156 ~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 233 (302)
T 2j7t_A 156 IRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233 (302)
T ss_dssp EEECCCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred EEEEECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH
Confidence 9999999976432211 111234689999999987 466788999999999999999999999975432222222
Q ss_pred HHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 915 WVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. .... ..... ..... ..+.+++.+||+.||++|||++++++
T Consensus 234 ~~----~~~~-~~~~~--~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 234 IA----KSDP-PTLLT--PSKWS----VEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HH----HSCC-CCCSS--GGGSC----HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred Hh----ccCC-cccCC--ccccC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11 1111 11000 01122 24778999999999999999999874
No 253
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=6.4e-37 Score=361.61 Aligned_cols=264 Identities=23% Similarity=0.279 Sum_probs=201.6
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|.+.++||+|+||+||+|..+ +++.||+|++.+....... ............+.+.+|+.++++++||||+
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~----~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 109 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGR----YSDDNKNIEKFHEEIYNEISLLKSLDHPNII 109 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC--------------------CTHHHHHHHHHHHHTCCCTTBC
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhccccc----ccccchhhHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4578999999999999999999975 5789999998653211000 0000001123456789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC-
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF- 838 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~- 838 (1002)
++++++.+.+..|+||||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 110 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~ 184 (504)
T 3q5i_A 110 KLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNS 184 (504)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTC
T ss_pred eEEEEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCC
Confidence 9999999999999999999999999998753 4699999999999999999999999 999999999999998776
Q ss_pred --CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 839 --GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 839 --~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
.+||+|||+++....... .....||+.|+|||++. ..++.++||||+||++|+|++|..||..... .+....+
T Consensus 185 ~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i 259 (504)
T 3q5i_A 185 LLNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-QDIIKKV 259 (504)
T ss_dssp CSSEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH
T ss_pred CccEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHH
Confidence 699999999987754422 23457999999999877 4689999999999999999999999976432 2222222
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. ..... ..+...... .++.+++.+|++.||.+|||++|+++
T Consensus 260 ~~----~~~~~-~~~~~~~~s----~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 260 EK----GKYYF-DFNDWKNIS----DEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HH----CCCCC-CHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Hc----CCCCC-CccccCCCC----HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 21 11100 001111222 24788999999999999999999985
No 254
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.7e-37 Score=340.12 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=195.1
Q ss_pred cCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC--CCceee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR--HKNIVK 760 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~ 760 (1002)
++|++.+.||+|+||.||+|...+++.||||++.... ......+.+.+|+.++++++ ||||++
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~~~~~~iv~ 92 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---------------ADNQTLDSYRNEIAYLNKLQQHSDKIIR 92 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS---------------CCHHHHHHHHHHHHHHHHHGGGCTTBCC
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc---------------ccccchHHHHHHHHHHHhccccCCceEE
Confidence 5688899999999999999998889999999985321 13445678999999999997 599999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++...+..++|||+ .+++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++ ++.+
T Consensus 93 ~~~~~~~~~~~~lv~e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~ 165 (313)
T 3cek_A 93 LYDYEITDQYIYMVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML 165 (313)
T ss_dssp EEEEEECSSEEEEEECC-CSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEE
T ss_pred EEEEeecCCEEEEEEec-CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeE
Confidence 99999999999999995 58899999985 35689999999999999999999999 999999999999996 4899
Q ss_pred EEccccCcccccCCCCCcccccccccccccCcccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-----------LRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
||+|||+++...............||+.|+|||++.+ ..++.++||||||+++|||++|+.||......
T Consensus 166 kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (313)
T 3cek_A 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245 (313)
T ss_dssp EECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred EEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH
Confidence 9999999987755433323335579999999999875 46788999999999999999999999754332
Q ss_pred hhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 910 KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
..... ...... .. ....... ..++.+++.+||+.||++||+++|+++.
T Consensus 246 ~~~~~---~~~~~~-~~----~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 246 ISKLH---AIIDPN-HE----IEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHH---HHHCTT-SC----CCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHH---HHHhcc-cc----cCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 22111 111111 00 0111111 1247789999999999999999999863
No 255
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.5e-37 Score=335.66 Aligned_cols=253 Identities=23% Similarity=0.297 Sum_probs=187.2
Q ss_pred cCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+.++...++.++||||+++
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~~~~~~~~~~h~~iv~~ 71 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---------------NSQEQKRLLMDLDISMRTVDCPFTVTF 71 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC------------------CHHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc---------------CcHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 5688889999999999999997 568999999984321 122334445556666888899999999
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCC
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHS--CKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
++++.+++..++||||++ |+|.+++.. .....+++..++.++.|++.||+|||++ .+|+||||||+||+++.++.
T Consensus 72 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~ 148 (290)
T 3fme_A 72 YGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQ 148 (290)
T ss_dssp EEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCC
T ss_pred eeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCC
Confidence 999999999999999996 688887764 2456799999999999999999999985 28999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCcccc----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYA----YTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
+||+|||+++....... .....||+.|+|||++ .+..++.++||||+|+++|||++|+.||............
T Consensus 149 ~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 225 (290)
T 3fme_A 149 VKMCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ 225 (290)
T ss_dssp EEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH
T ss_pred EEEeecCCccccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH
Confidence 99999999987654322 2234699999999996 5667889999999999999999999999754332222211
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...... .... ..... ..+.+++.+||+.||++|||++|+++
T Consensus 226 ---~~~~~~-~~~~---~~~~~----~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 226 ---VVEEPS-PQLP---ADKFS----AEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---HHHSCC-CCCC---TTTSC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---HhccCC-CCcc---cccCC----HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111111 1100 01122 24788999999999999999999986
No 256
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8.7e-37 Score=333.47 Aligned_cols=253 Identities=26% Similarity=0.338 Sum_probs=202.3
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.++++++||||+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~---------------~~~~~~~~~~e~~~l~~l~h~~i~ 84 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA---------------KNKDTSTILREVELLKKLDHPNIM 84 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB---------------SSSCHHHHHHHHHHHHTCCCTTBC
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc---------------chHHHHHHHHHHHHHHhccCCCcc
Confidence 4568899999999999999999975 689999999854311 123456789999999999999999
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC--
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD-- 837 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~-- 837 (1002)
++++++.+.+..++||||+++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~ 159 (287)
T 2wei_A 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEK 159 (287)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred EEEEEEeCCCeEEEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCC
Confidence 9999999999999999999999999988753 4689999999999999999999999 99999999999999754
Q ss_pred -CCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 001867 838 -FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWV 916 (1002)
Q Consensus 838 -~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~ 916 (1002)
+.+||+|||++........ .....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... ..+....+
T Consensus 160 ~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~ 234 (287)
T 2wei_A 160 DCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-EYDILKRV 234 (287)
T ss_dssp TCCEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHH
T ss_pred cccEEEeccCcceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC-HHHHHHHH
Confidence 4699999999987654322 223458899999998875 48999999999999999999999997543 22222222
Q ss_pred HHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 917 CSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. ..... ..+....... ++.+++.+||+.||++|||++|+++
T Consensus 235 ~~----~~~~~-~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 235 ET----GKYAF-DLPQWRTISD----DAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HH----CCCCC-CSGGGTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Hc----CCCCC-CchhhhhcCH----HHHHHHHHHcccChhhCcCHHHHhc
Confidence 11 11110 0111122222 4788999999999999999999987
No 257
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.3e-37 Score=349.44 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=199.5
Q ss_pred HHHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc
Q 001867 679 YEILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN 757 (1002)
Q Consensus 679 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 757 (1002)
+++.++|.+.+.||+|+||.||+|... +|+.||||++... .......+.+.+|+.++++++|||
T Consensus 38 ~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~h~n 102 (371)
T 4exu_A 38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP---------------FQSEIFAKRAYRELLLLKHMQHEN 102 (371)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECST---------------TSSHHHHHHHHHHHHHHHHCCCTT
T ss_pred ecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccc---------------ccchhHHHHHHHHHHHHHhcCCCC
Confidence 455678889999999999999999964 6899999998432 123445677899999999999999
Q ss_pred eeeeeeEEecCCee------eEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 001867 758 IVKLWCCCTTRDCK------LLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNN 831 (1002)
Q Consensus 758 iv~l~~~~~~~~~~------~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~N 831 (1002)
|+++++++...+.. |+||||++ ++|.+++. ..+++..++.++.|++.||+|||++ +|+||||||+|
T Consensus 103 iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~N 174 (371)
T 4exu_A 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGN 174 (371)
T ss_dssp BCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred chhhhhheeccCCcccceeEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHH
Confidence 99999999877655 99999996 68888874 3499999999999999999999999 99999999999
Q ss_pred EEECCCCCeEEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCch
Q 001867 832 ILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK 910 (1002)
Q Consensus 832 Ill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~ 910 (1002)
|+++.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+
T Consensus 175 Ill~~~~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 249 (371)
T 4exu_A 175 LAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249 (371)
T ss_dssp EEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred eEECCCCCEEEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 99999999999999999865432 234568999999999887 778999999999999999999999997654333
Q ss_pred hHHHHHHHHhhcc-----------------CccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 001867 911 DLVKWVCSTLDQK-----------------GVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 911 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 968 (1002)
............. ..............+.....+.+++.+|++.||++|||++|+++.
T Consensus 250 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 250 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 3322222110000 000000000000001112357899999999999999999999853
No 258
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.4e-36 Score=340.41 Aligned_cols=258 Identities=19% Similarity=0.238 Sum_probs=202.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEE--cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC---
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL--SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK--- 756 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--- 756 (1002)
.++|++.+.||+|+||.||+|.. .+++.||||++.. .....+.+.+|+.++++++|+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~------------------~~~~~~~~~~e~~~l~~l~~~~~~ 74 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN------------------VDRYCEAARSEIQVLEHLNTTDPN 74 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS------------------SHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec------------------CCchhHHHHHHHHHHHHhhhcCCC
Confidence 35788899999999999999986 3588999999842 123456788999999988655
Q ss_pred ---ceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 001867 757 ---NIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNIL 833 (1002)
Q Consensus 757 ---niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIl 833 (1002)
+++++++++...+..++||||+ +++|.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 75 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil 150 (339)
T 1z57_A 75 STFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENIL 150 (339)
T ss_dssp CTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred CceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEE
Confidence 5999999999999999999999 89999999876666799999999999999999999999 9999999999999
Q ss_pred ECC-------------------CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHH
Q 001867 834 LDG-------------------DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVIL 894 (1002)
Q Consensus 834 l~~-------------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ 894 (1002)
++. ++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 225 (339)
T 1z57_A 151 FVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILI 225 (339)
T ss_dssp ESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHH
T ss_pred EeccccccccCCccccccccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHH
Confidence 987 6689999999998754332 2446899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCchhHHHHHHHHhhccCc--------ccc---------------------cc--ccccCCCHHHHHH
Q 001867 895 ELVTGRLPVDPEFGEKDLVKWVCSTLDQKGV--------DHV---------------------LD--PKLDCCFKEEICK 943 (1002)
Q Consensus 895 ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~---------------------~~--~~~~~~~~~~~~~ 943 (1002)
||++|+.||....... ....+......... ... .. ............+
T Consensus 226 el~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
T 1z57_A 226 EYYLGFTVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304 (339)
T ss_dssp HHHHSSCSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred HHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHH
Confidence 9999999997653322 22222111110000 000 00 0001112234557
Q ss_pred HHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 944 VLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 944 l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+.+++.+||+.||++|||++|+++
T Consensus 305 l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 305 LFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHhCcCcccccCHHHHhc
Confidence 889999999999999999999863
No 259
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=344.37 Aligned_cols=259 Identities=22% Similarity=0.294 Sum_probs=197.5
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|.+.+.||+|+||.||+|... +|+.||||++... .......+.+.+|+.++++++||||+
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~h~~iv 86 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP---------------FQSEIFAKRAYRELLLLKHMQHENVI 86 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESST---------------TSSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccc---------------ccchHHHHHHHHHHHHHHhcCCCCcc
Confidence 3467888899999999999999974 6899999998432 12344567789999999999999999
Q ss_pred eeeeEEecCCe------eeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 001867 760 KLWCCCTTRDC------KLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNIL 833 (1002)
Q Consensus 760 ~l~~~~~~~~~------~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIl 833 (1002)
++++++...+. .|+||||++ ++|.+++. ..+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl 158 (353)
T 3coi_A 87 GLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLA 158 (353)
T ss_dssp CCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEE
T ss_pred cHhheEecccccccceeEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEe
Confidence 99999987654 499999996 68888875 3489999999999999999999999 9999999999999
Q ss_pred ECCCCCeEEccccCcccccCCCCCcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhH
Q 001867 834 LDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDL 912 (1002)
Q Consensus 834 l~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~ 912 (1002)
++.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 159 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 233 (353)
T 3coi_A 159 VNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 233 (353)
T ss_dssp ECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHH
T ss_pred ECCCCcEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999999999865432 224568999999998876 67899999999999999999999999765433222
Q ss_pred HHHHHHHhhc-----------------cCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 913 VKWVCSTLDQ-----------------KGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 913 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.......... ........+............+.+++.+|++.||++|||++|+++
T Consensus 234 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 234 TQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 2221110000 000000001111111122235888999999999999999999985
No 260
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.6e-37 Score=350.65 Aligned_cols=260 Identities=23% Similarity=0.258 Sum_probs=202.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC------
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR------ 754 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------ 754 (1002)
.++|++.+.||+|+||.||+|+. .+++.||||++.. .....+.+.+|+.++++++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~------------------~~~~~~~~~~E~~~l~~l~~~~~~~ 97 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS------------------AEHYTETALDEIRLLKSVRNSDPND 97 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------------------CHHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec------------------CCcchHHHHHHHHHHHHHhhcCCCC
Confidence 36789999999999999999986 4588999999842 2334567889999999985
Q ss_pred --CCceeeeeeEEe----cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCC
Q 001867 755 --HKNIVKLWCCCT----TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVK 828 (1002)
Q Consensus 755 --h~niv~l~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk 828 (1002)
|+||+++++++. .....++||||+ ++++.+++.......+++..++.++.||+.||+|||+++ +|+|||||
T Consensus 98 ~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDik 174 (397)
T 1wak_A 98 PNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIK 174 (397)
T ss_dssp GGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCS
T ss_pred CCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCC
Confidence 788999999998 566889999999 677777776655567999999999999999999999852 79999999
Q ss_pred CCcEEECCCC-------------------------------------------------CeEEccccCcccccCCCCCcc
Q 001867 829 SNNILLDGDF-------------------------------------------------GARVADFGVAKVVDASGKPKS 859 (1002)
Q Consensus 829 ~~NIll~~~~-------------------------------------------------~~kl~DfGl~~~~~~~~~~~~ 859 (1002)
|+||+++.++ .+||+|||+++.....
T Consensus 175 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----- 249 (397)
T 1wak_A 175 PENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----- 249 (397)
T ss_dssp GGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----
T ss_pred HHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----
Confidence 9999999775 7999999999876543
Q ss_pred cccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCch-----hHHHHHHHHhhccC--------c-
Q 001867 860 MSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK-----DLVKWVCSTLDQKG--------V- 925 (1002)
Q Consensus 860 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~-----~~~~~~~~~~~~~~--------~- 925 (1002)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... +....+........ .
T Consensus 250 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 329 (397)
T 1wak_A 250 FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS 329 (397)
T ss_dssp SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTG
T ss_pred CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccc
Confidence 224468999999999999999999999999999999999999997643321 11111111110000 0
Q ss_pred cccccc----------c----------ccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 926 DHVLDP----------K----------LDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 926 ~~~~~~----------~----------~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...+.. . ......+....+.+++.+||+.||++|||++|+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 330 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp GGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000000 0 01123555667899999999999999999999984
No 261
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.8e-37 Score=345.68 Aligned_cols=264 Identities=20% Similarity=0.281 Sum_probs=199.6
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|... +|+.||||++... ........+.+|+.++++++||||+
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~~iv 72 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF----------------DKPLFALRTLREIKILKHFKHENII 72 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----------------SSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc----------------ccchHHHHHHHHHHHHHhCcCCCcC
Confidence 4567888999999999999999975 6889999998421 1234456788999999999999999
Q ss_pred eeeeEEecC-----CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 760 KLWCCCTTR-----DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 760 ~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
++++++... ...++||||++ |+|.+++.. +.+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 73 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~ 145 (353)
T 2b9h_A 73 TIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLI 145 (353)
T ss_dssp CEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeeeeecccccCccceEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEE
Confidence 999988754 67899999996 699999875 4699999999999999999999999 99999999999999
Q ss_pred CCCCCeEEccccCcccccCCCCCc--------ccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCCCCCC
Q 001867 835 DGDFGARVADFGVAKVVDASGKPK--------SMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRLPVDP 905 (1002)
Q Consensus 835 ~~~~~~kl~DfGl~~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~p~~~ 905 (1002)
+.++.+||+|||+++......... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 146 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 225 (353)
T 2b9h_A 146 NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225 (353)
T ss_dssp CTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999998765432211 1223468999999998764 6789999999999999999999999976
Q ss_pred CCCchhHHHHHHHHhhcc---Cccc---------------cccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 906 EFGEKDLVKWVCSTLDQK---GVDH---------------VLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~---~~~~---------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.................. .... ..........+....++.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 226 RDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp SSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 543222222211110000 0000 0000000000111234778999999999999999999986
No 262
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=9.1e-37 Score=351.16 Aligned_cols=257 Identities=25% Similarity=0.285 Sum_probs=194.2
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
..|++.+.||+|+||.||+|++. +++.||||++... .....+|++++++++|||||++
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~---------------------~~~~~~E~~il~~l~hpniv~l 112 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD---------------------KRFKNRELQIMRKLDHCNIVRL 112 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------------------TTSCCHHHHHHHTCCCTTBCCE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc---------------------chhHHHHHHHHHHcCCCCccce
Confidence 35777899999999999999975 5899999998432 1123469999999999999999
Q ss_pred eeEEecC------CeeeEEEeccCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 001867 762 WCCCTTR------DCKLLVYEYMPNGSLGDLLHS--CKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNIL 833 (1002)
Q Consensus 762 ~~~~~~~------~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIl 833 (1002)
++++... ...++||||+++ ++.+.+.. .....+++..++.++.||+.||+|||++ +|+||||||+|||
T Consensus 113 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIL 188 (420)
T 1j1b_A 113 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLL 188 (420)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEE
T ss_pred eeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEE
Confidence 9998532 236799999964 67666543 2356799999999999999999999999 9999999999999
Q ss_pred ECCC-CCeEEccccCcccccCCCCCcccccccccccccCccccccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCCchh
Q 001867 834 LDGD-FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD 911 (1002)
Q Consensus 834 l~~~-~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~ 911 (1002)
++.+ +.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+.
T Consensus 189 l~~~~~~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~ 265 (420)
T 1j1b_A 189 LDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 265 (420)
T ss_dssp EETTTTEEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EeCCCCeEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9965 5689999999987654332 2234789999999998764 789999999999999999999999987654444
Q ss_pred HHHHHHHHhh---------ccCccccccccccCC------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 912 LVKWVCSTLD---------QKGVDHVLDPKLDCC------FKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 912 ~~~~~~~~~~---------~~~~~~~~~~~~~~~------~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
+.+++..... .........+..... ......++.+++.+||+.||++||++.|+++
T Consensus 266 l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 266 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 4444332110 000111111111100 0011235789999999999999999999985
No 263
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=357.99 Aligned_cols=302 Identities=20% Similarity=0.127 Sum_probs=179.0
Q ss_pred ccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCC-cceeecC
Q 001867 239 KLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLP-LESLNLY 317 (1002)
Q Consensus 239 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~L~ 317 (1002)
+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..+..++ |+.|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 445555555555555455555555555555555555555555555555666666665555543333344432 5555555
Q ss_pred CCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCC
Q 001867 318 ENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQL 397 (1002)
Q Consensus 318 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 397 (1002)
+|++.+..+..|..+++|++|++++|++.+..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.+..
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 55555555666666677777777777777666667777777777777777777655556666666666666666666666
Q ss_pred CCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccc
Q 001867 398 PDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLK 477 (1002)
Q Consensus 398 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 477 (1002)
+..|..+++|+.|++++|.+.+.+|....... +|+.|++++|++++..+..+..++
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~------------------------~L~~L~l~~n~l~~~~~~~~~~l~ 248 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL------------------------NLTSLSITHCNLTAVPYLAVRHLV 248 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTC------------------------CCSEEEEESSCCCSCCHHHHTTCT
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCc------------------------cccEEECcCCcccccCHHHhcCcc
Confidence 66666666666666666665555554444333 455555555555533334455555
Q ss_pred ccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCc
Q 001867 478 SLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLS 557 (1002)
Q Consensus 478 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls 557 (1002)
+|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 328 (477)
T 2id5_A 249 YLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILD 328 (477)
T ss_dssp TCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECC
T ss_pred ccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEcc
Confidence 55555555555555445555566666666666666666666666666666666666666665444455666666666666
Q ss_pred ceeeecc
Q 001867 558 NNRLSGR 564 (1002)
Q Consensus 558 ~N~l~~~ 564 (1002)
+|+++..
T Consensus 329 ~N~l~c~ 335 (477)
T 2id5_A 329 SNPLACD 335 (477)
T ss_dssp SSCEECS
T ss_pred CCCccCc
Confidence 6666543
No 264
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-37 Score=352.28 Aligned_cols=256 Identities=12% Similarity=0.041 Sum_probs=180.8
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC--CCCcee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI--RHKNIV 759 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv 759 (1002)
..|.+.+.||+|+||.||+|.+. +++.||||++.... .......+.+.+|+.+++.+ +||||+
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~E~~~~~~l~~~hp~iv 127 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGA--------------ENSRSELERLHEATFAAARLLGESPEEA 127 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCS--------------TTHHHHHHHHHHHHHHHHHHHC------
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecc--------------cccccHHHHHHHHHHHHHHhcccChhhh
Confidence 34778899999999999999964 68999999996531 11344566778885444444 699988
Q ss_pred eee-------eEEecC-----------------CeeeEEEeccCCCChhhhhhhcCCCCCCHHHH------HHHHHHHHH
Q 001867 760 KLW-------CCCTTR-----------------DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTR------YKIIVDAAE 809 (1002)
Q Consensus 760 ~l~-------~~~~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~------~~i~~qi~~ 809 (1002)
+++ +++... ...|+||||++ |+|.+++.... ..+++..+ ..++.|++.
T Consensus 128 ~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~ 205 (371)
T 3q60_A 128 RDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIR 205 (371)
T ss_dssp ----CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHH
T ss_pred hhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHH
Confidence 755 455433 23799999998 89999998642 23455666 788899999
Q ss_pred HHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCcccccc--CCCCCccchh
Q 001867 810 GLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT--LRVNEKSDIY 887 (1002)
Q Consensus 810 ~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvw 887 (1002)
||+|||++ +|+||||||+||+++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||
T Consensus 206 aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~Diw 277 (371)
T 3q60_A 206 LAANLQSK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAW 277 (371)
T ss_dssp HHHHHHHT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHH
T ss_pred HHHHHHHC---CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHH
Confidence 99999999 9999999999999999999999999999866432 113457799999999987 6799999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 888 SFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 888 slGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
||||++|||++|+.||......... .+...............+.....++ .+.+++.+||+.||++|||++|+++
T Consensus 278 SlG~il~elltg~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 278 QLGLSIYRVWCLFLPFGLVTPGIKG-SWKRPSLRVPGTDSLAFGSCTPLPD----FVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHHHHHHHHHSSCSTTBCCTTCTT-CCCBCCTTSCCCCSCCCTTSSCCCH----HHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcCccccc-chhhhhhhhccccccchhhccCCCH----HHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9999999999999999755322100 0000000000000111111122233 4788999999999999999999974
No 265
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=9.3e-37 Score=336.02 Aligned_cols=253 Identities=26% Similarity=0.423 Sum_probs=192.3
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.++|++.+.||+|+||.||+|+. .+++.||||++.. .....+.+.+|+.++++++||||+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------------------~~~~~~~~~~E~~~l~~l~h~~i~ 65 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH------------------TEEKLSTILSEVMLLASLNHQYVV 65 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE------------------EHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec------------------cHHHHHHHHHHHHHHHhcCchHHH
Confidence 356788899999999999999996 4689999999843 233457789999999999999999
Q ss_pred eeeeEEec-------------CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCC
Q 001867 760 KLWCCCTT-------------RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRD 826 (1002)
Q Consensus 760 ~l~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrD 826 (1002)
++++++.+ .+..|+||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+|||
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~d 141 (303)
T 1zy4_A 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRD 141 (303)
T ss_dssp CEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred HHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 99999865 3567999999999999999986 345688999999999999999999999 999999
Q ss_pred CCCCcEEECCCCCeEEccccCcccccCCCC------------CcccccccccccccCccccccC-CCCCccchhhHHHHH
Q 001867 827 VKSNNILLDGDFGARVADFGVAKVVDASGK------------PKSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVI 893 (1002)
Q Consensus 827 lk~~NIll~~~~~~kl~DfGl~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil 893 (1002)
|||+||+++.++.+||+|||+++....... ........||+.|+|||++.+. .++.++||||+||++
T Consensus 142 lkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il 221 (303)
T 1zy4_A 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221 (303)
T ss_dssp CCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHH
T ss_pred CCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHH
Confidence 999999999999999999999987653211 1122345689999999998764 689999999999999
Q ss_pred HHHHhCCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 894 LELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 894 ~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
|||++ ||............+. .. ...+.+... ......+.+++.+||+.||++|||++++++
T Consensus 222 ~~l~~---p~~~~~~~~~~~~~~~----~~--~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 222 FEMIY---PFSTGMERVNILKKLR----SV--SIEFPPDFD---DNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHS---CCSSHHHHHHHHHHHH----ST--TCCCCTTCC---TTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHh---ccCCchhHHHHHHhcc----cc--ccccCcccc---ccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 99998 5543211111111111 11 111111111 112234778999999999999999999985
No 266
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.4e-36 Score=367.42 Aligned_cols=258 Identities=23% Similarity=0.322 Sum_probs=204.3
Q ss_pred cCCCcCCeeeecCCccEEEEEEcC----CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLSN----GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
++|++.+.||+|+||.||+|.+.. +..||+|++... ......+.+.+|+.++++++||||
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~HpnI 453 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC----------------TSDSVREKFLQEALTMRQFDHPHI 453 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST----------------TCHHHHHHHHHHHHHHHHCCCTTB
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc----------------CCHHHHHHHHHHHHHHHhCCCCCC
Confidence 567888999999999999998742 457999987431 123445779999999999999999
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDF 838 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~ 838 (1002)
+++++++.+ +..|+||||+++|+|.++++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 454 v~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~ 528 (656)
T 2j0j_A 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 528 (656)
T ss_dssp CCEEEEECS-SSCEEEEECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETT
T ss_pred CeEEEEEec-CceEEEEEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCC
Confidence 999999854 568999999999999999986 345699999999999999999999999 999999999999999999
Q ss_pred CeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhHHHHHH
Q 001867 839 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDLVKWVC 917 (1002)
Q Consensus 839 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~~~~~~ 917 (1002)
.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... .+....+.
T Consensus 529 ~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-~~~~~~i~ 606 (656)
T 2j0j_A 529 CVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIE 606 (656)
T ss_dssp EEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHH
T ss_pred CEEEEecCCCeecCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHH
Confidence 9999999999876544322 2234457789999999999999999999999999999997 8899875432 22222222
Q ss_pred HHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhh
Q 001867 918 STLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAE 975 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 975 (1002)
.... . +.....+ ..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 607 ~~~~---~-----~~~~~~~----~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 607 NGER---L-----PMPPNCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp HTCC---C-----CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCC---C-----CCCcccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 1110 0 1112222 2478899999999999999999999999998653
No 267
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.8e-36 Score=342.29 Aligned_cols=203 Identities=27% Similarity=0.294 Sum_probs=172.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CC---
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HK--- 756 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~--- 756 (1002)
.++|++.+.||+|+||+||+|... +++.||||++.. .......+..|+.+++.++ |+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~------------------~~~~~~~~~~e~~~l~~l~~~~~~~ 114 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN------------------KKAFLNQAQIEVRLLELMNKHDTEM 114 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS------------------SHHHHHHHHHHHHHHHHHHHCSSGG
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec------------------cHHHHHHHHHHHHHHHHHHhccccc
Confidence 568899999999999999999965 578999999843 1233556778888888875 44
Q ss_pred --ceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 757 --NIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 757 --niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
+|+++++++...+..++||||++ |+|.+++.......+++..++.++.|++.||+|||++ ..+|+||||||+||++
T Consensus 115 ~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll 192 (382)
T 2vx3_A 115 KYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILL 192 (382)
T ss_dssp GGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEE
T ss_pred ceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEE
Confidence 59999999999999999999995 6999999876667799999999999999999999952 1299999999999999
Q ss_pred C--CCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCc
Q 001867 835 D--GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE 909 (1002)
Q Consensus 835 ~--~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~ 909 (1002)
+ .++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 193 ~~~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 264 (382)
T 2vx3_A 193 CNPKRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264 (382)
T ss_dssp SSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ecCCCCcEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 5 4778999999999876543 22457899999999999999999999999999999999999999865433
No 268
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=337.91 Aligned_cols=264 Identities=20% Similarity=0.291 Sum_probs=193.0
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
.+.++|++.+.||+|+||.||+|... +++.||+|++... +....+.+.+|+.++++++||||
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~i 70 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-----------------DPQSVKHALREIKIIRRLDHDNI 70 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC-----------------SHHHHHHHHHHHHHHHTCCCTTB
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC-----------------ChHHHHHHHHHHHHHHhcCCCCe
Confidence 34567888999999999999999975 4899999988432 33456778999999999999999
Q ss_pred eeeeeEEe--------------cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 001867 759 VKLWCCCT--------------TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVH 824 (1002)
Q Consensus 759 v~l~~~~~--------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiH 824 (1002)
+++++++. +....|+||||++ |+|.+++.. +.+++..++.++.|++.||+|||++ +|+|
T Consensus 71 v~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H 143 (320)
T 2i6l_A 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLH 143 (320)
T ss_dssp CCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBC
T ss_pred eEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEec
Confidence 99999884 3467899999996 699999863 5689999999999999999999999 9999
Q ss_pred CCCCCCcEEEC-CCCCeEEccccCcccccCCCC-CcccccccccccccCcccccc-CCCCCccchhhHHHHHHHHHhCCC
Q 001867 825 RDVKSNNILLD-GDFGARVADFGVAKVVDASGK-PKSMSVIAGSCGYIAPEYAYT-LRVNEKSDIYSFGVVILELVTGRL 901 (1002)
Q Consensus 825 rDlk~~NIll~-~~~~~kl~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell~g~~ 901 (1002)
|||||+||+++ .++.+||+|||+++....... ........+|..|+|||++.+ ..++.++||||||+++|||++|+.
T Consensus 144 ~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~ 223 (320)
T 2i6l_A 144 RDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223 (320)
T ss_dssp CCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCC
Confidence 99999999997 567899999999987654321 112234467899999998765 678999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHHhhc---------cCccc-----ccccc--ccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Q 001867 902 PVDPEFGEKDLVKWVCSTLDQ---------KGVDH-----VLDPK--LDCCFKEEICKVLNIGLLCTSPLPINRPAMRRV 965 (1002)
Q Consensus 902 p~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev 965 (1002)
||................... ..... ...+. .....+....++.+++.+||+.||++|||++|+
T Consensus 224 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 303 (320)
T 2i6l_A 224 LFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303 (320)
T ss_dssp SSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHH
Confidence 997654332222221110000 00000 00000 000001112357889999999999999999999
Q ss_pred HH
Q 001867 966 VK 967 (1002)
Q Consensus 966 l~ 967 (1002)
++
T Consensus 304 l~ 305 (320)
T 2i6l_A 304 LS 305 (320)
T ss_dssp HT
T ss_pred hC
Confidence 75
No 269
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.5e-36 Score=343.19 Aligned_cols=263 Identities=21% Similarity=0.215 Sum_probs=187.9
Q ss_pred HHhcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 680 EILDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 680 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
...++|++.+.||+|+||.||+|+.. +++.||||++... ........+|+..++.++||||
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------------------~~~~~~~~~~~~~l~~l~h~ni 81 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD------------------PRFRNRELQIMQDLAVLHHPNI 81 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECC------------------TTCCCHHHHHHHHHHHHCCTTB
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC------------------ccccHHHHHHHHHHHhcCCCCc
Confidence 44688999999999999999999974 6899999988432 1122346678888888999999
Q ss_pred eeeeeEEecCCe-------eeEEEeccCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCCeeeCCC
Q 001867 759 VKLWCCCTTRDC-------KLLVYEYMPNGSLGDLLHS--CKGGLLDWPTRYKIIVDAAEGLSYLH--HDCVPSIVHRDV 827 (1002)
Q Consensus 759 v~l~~~~~~~~~-------~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~~~iiHrDl 827 (1002)
+++++++...+. .++||||+++ +|.+.+.. .....+++..+..++.|++.||+||| ++ +|+||||
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dl 157 (360)
T 3e3p_A 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDI 157 (360)
T ss_dssp CCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCC
T ss_pred ccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcC
Confidence 999999975433 7899999975 55554432 24567899999999999999999999 87 9999999
Q ss_pred CCCcEEECC-CCCeEEccccCcccccCCCCCcccccccccccccCccccccCC-CCCccchhhHHHHHHHHHhCCCCCCC
Q 001867 828 KSNNILLDG-DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLR-VNEKSDIYSFGVVILELVTGRLPVDP 905 (1002)
Q Consensus 828 k~~NIll~~-~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~ell~g~~p~~~ 905 (1002)
||+||+++. ++.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 158 kp~NIll~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 234 (360)
T 3e3p_A 158 KPHNVLVNEADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234 (360)
T ss_dssp CGGGEEEETTTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEEeCCCCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCC
Confidence 999999996 89999999999987654432 22446899999999986654 89999999999999999999999987
Q ss_pred CCCchhHHHHHHHHhhc----------cCcc-cccc-------ccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 906 EFGEKDLVKWVCSTLDQ----------KGVD-HVLD-------PKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 906 ~~~~~~~~~~~~~~~~~----------~~~~-~~~~-------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
................. .... ...+ .............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 235 DNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 64443333332211100 0000 0000 0000111112346889999999999999999999985
No 270
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=351.57 Aligned_cols=263 Identities=20% Similarity=0.268 Sum_probs=181.3
Q ss_pred cCCCc-CCeeeecCCccEEEEEEc---CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce
Q 001867 683 DGLDE-DNVIGSGSSGKVYKVVLS---NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI 758 (1002)
Q Consensus 683 ~~~~~-~~~LG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 758 (1002)
+.|++ +++||+|+||.||+|+.+ +++.||||++... .....+.+|+.++++++||||
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~-------------------~~~~~~~~E~~~l~~l~hpni 80 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-------------------GISMSACREIALLRELKHPNV 80 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS-------------------SCCHHHHHHHHHHHHCCCTTB
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC-------------------CCCHHHHHHHHHHHhcCCCCe
Confidence 33544 568999999999999965 4788999998431 112457899999999999999
Q ss_pred eeeeeEEe--cCCeeeEEEeccCCCChhhhhhhcC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCC
Q 001867 759 VKLWCCCT--TRDCKLLVYEYMPNGSLGDLLHSCK-------GGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKS 829 (1002)
Q Consensus 759 v~l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~ 829 (1002)
+++++++. .....|+||||++ |+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||
T Consensus 81 v~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp 156 (405)
T 3rgf_A 81 ISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKP 156 (405)
T ss_dssp CCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCG
T ss_pred eeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCH
Confidence 99999995 4678999999995 68888876322 23599999999999999999999999 999999999
Q ss_pred CcEEE----CCCCCeEEccccCcccccCCCCC-cccccccccccccCccccccC-CCCCccchhhHHHHHHHHHhCCCCC
Q 001867 830 NNILL----DGDFGARVADFGVAKVVDASGKP-KSMSVIAGSCGYIAPEYAYTL-RVNEKSDIYSFGVVILELVTGRLPV 903 (1002)
Q Consensus 830 ~NIll----~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ell~g~~p~ 903 (1002)
+||++ +.++.+||+|||+++........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 157 ~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 236 (405)
T 3rgf_A 157 ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236 (405)
T ss_dssp GGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCC
Confidence 99999 67789999999999877543221 223456799999999998874 5899999999999999999999999
Q ss_pred CCCCCc---------hhHHHHHHHHhhc--cCcccc-------------ccccccCCCH---------HHHHHHHHHHHH
Q 001867 904 DPEFGE---------KDLVKWVCSTLDQ--KGVDHV-------------LDPKLDCCFK---------EEICKVLNIGLL 950 (1002)
Q Consensus 904 ~~~~~~---------~~~~~~~~~~~~~--~~~~~~-------------~~~~~~~~~~---------~~~~~l~~l~~~ 950 (1002)
...... +.+...+...... .....+ .......... .....+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~ 316 (405)
T 3rgf_A 237 HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQK 316 (405)
T ss_dssp CCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHH
T ss_pred CCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHH
Confidence 754321 1111211111000 000000 0000000000 001247789999
Q ss_pred cCCCCCCCCCCHHHHHHH
Q 001867 951 CTSPLPINRPAMRRVVKL 968 (1002)
Q Consensus 951 cl~~dP~~Rps~~evl~~ 968 (1002)
|++.||++|||++|+++.
T Consensus 317 ~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 317 LLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HSCSSGGGSCCHHHHHTS
T ss_pred HccCCcccCCCHHHHhcC
Confidence 999999999999999863
No 271
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=9.5e-37 Score=340.72 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=175.1
Q ss_pred HHHHhcCCCcCC-eeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC
Q 001867 678 EYEILDGLDEDN-VIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH 755 (1002)
Q Consensus 678 ~~~~~~~~~~~~-~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 755 (1002)
.+.+.++|.+.+ .||+|+||.||+|... +++.||||++... . .........++.++|
T Consensus 23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------------------~---~~~~e~~~~~~~~~h 81 (336)
T 3fhr_A 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS------------------P---KARQEVDHHWQASGG 81 (336)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS------------------H---HHHHHHHHHHHHTTS
T ss_pred CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc------------------H---HHHHHHHHHHHhcCC
Confidence 356678888854 6999999999999975 6899999998431 1 111222333556789
Q ss_pred CceeeeeeEEec----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 001867 756 KNIVKLWCCCTT----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNN 831 (1002)
Q Consensus 756 ~niv~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~N 831 (1002)
|||+++++++.. ....++||||+++|+|.+++.......+++..++.++.|++.||+|||++ +|+||||||+|
T Consensus 82 ~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~N 158 (336)
T 3fhr_A 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPEN 158 (336)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred CChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence 999999999976 45589999999999999999876666899999999999999999999999 99999999999
Q ss_pred EEECC---CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCC
Q 001867 832 ILLDG---DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFG 908 (1002)
Q Consensus 832 Ill~~---~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~ 908 (1002)
|+++. ++.+||+|||+++...... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.....
T Consensus 159 Ill~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 234 (336)
T 3fhr_A 159 LLYTSKEKDAVLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 234 (336)
T ss_dssp EEESCSSTTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EEEEecCCCceEEEeccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccc
Confidence 99976 4559999999998664332 2345689999999999888899999999999999999999999975433
Q ss_pred chhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 909 EKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
....... ........ .....+....... .+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 235 QAISPGM-KRRIRLGQ-YGFPNPEWSEVSE----DAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ------------------CCCTTTSTTCCH----HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhhhhH-HHhhhccc-cccCchhhccCCH----HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2211111 11110000 0111111122233 4788999999999999999999997
No 272
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.1e-36 Score=347.26 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=185.8
Q ss_pred CCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCceeeeee
Q 001867 685 LDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIVKLWC 763 (1002)
Q Consensus 685 ~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 763 (1002)
|...+.||+|+||+||.+...+|+.||||++.. ...+.+.+|+.+++++ +||||+++++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~--------------------~~~~~~~~E~~~l~~l~~HpnIv~~~~ 76 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI--------------------DFCDIALMEIKLLTESDDHPNVIRYYC 76 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG--------------------GGHHHHHHHHHHHHHHTTSTTBCCEEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH--------------------HHHHHHHHHHHHHHhccCCCCcCeEEE
Confidence 444678999999999877777899999998832 1234578899999886 8999999999
Q ss_pred EEecCCeeeEEEeccCCCChhhhhhhcCCCC-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC-
Q 001867 764 CCTTRDCKLLVYEYMPNGSLGDLLHSCKGGL-----LDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD- 837 (1002)
Q Consensus 764 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-----l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~- 837 (1002)
++.+++..|+||||++ |+|.+++....... .++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 77 ~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~ 152 (434)
T 2rio_A 77 SETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSS 152 (434)
T ss_dssp EEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCH
T ss_pred EEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCc
Confidence 9999999999999995 79999998533211 13335678999999999999999 99999999999999754
Q ss_pred ------------CCeEEccccCcccccCCCCCc--ccccccccccccCcccccc-------CCCCCccchhhHHHHHHHH
Q 001867 838 ------------FGARVADFGVAKVVDASGKPK--SMSVIAGSCGYIAPEYAYT-------LRVNEKSDIYSFGVVILEL 896 (1002)
Q Consensus 838 ------------~~~kl~DfGl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~el 896 (1002)
+.+||+|||+++......... ......||+.|+|||++.+ ..++.++||||+||++|||
T Consensus 153 ~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~el 232 (434)
T 2rio_A 153 RFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232 (434)
T ss_dssp HHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHH
T ss_pred ccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHH
Confidence 479999999998876543221 1234579999999999875 5689999999999999999
Q ss_pred Hh-CCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 897 VT-GRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 897 l~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
++ |+.||....... .......... .. ...........++.+++.+||+.||++|||+.|+++
T Consensus 233 lt~g~~Pf~~~~~~~--~~i~~~~~~~---~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 233 LSKGKHPFGDKYSRE--SNIIRGIFSL---DE----MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HTTSCCTTCSTTTHH--HHHHHTCCCC---CC----CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhCCCCCCCCchhhH--HHHhcCCCCc---cc----ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 99 999997543322 1111111110 00 001112344557889999999999999999999985
No 273
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=8.1e-36 Score=336.55 Aligned_cols=257 Identities=19% Similarity=0.239 Sum_probs=200.7
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CC-cEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc--
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NG-EAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN-- 757 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-- 757 (1002)
.++|++.+.||+|+||.||+|... ++ +.||+|++.. .....+.+.+|+.++++++|++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~------------------~~~~~~~~~~E~~~l~~l~~~~~~ 79 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN------------------VGKYREAARLEINVLKKIKEKDKE 79 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS------------------CHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc------------------cccchhHHHHHHHHHHHHhhcCCC
Confidence 467888999999999999999974 34 6899999842 2234567888999999987655
Q ss_pred ----eeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 001867 758 ----IVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNIL 833 (1002)
Q Consensus 758 ----iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIl 833 (1002)
++.+++++...+..++||||+ ++++.+++.......+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIl 155 (355)
T 2eu9_A 80 NKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENIL 155 (355)
T ss_dssp SCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEE
T ss_pred CceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence 999999999999999999999 77888888765656799999999999999999999999 9999999999999
Q ss_pred E-------------------CCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHH
Q 001867 834 L-------------------DGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVIL 894 (1002)
Q Consensus 834 l-------------------~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ 894 (1002)
+ +.++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|
T Consensus 156 l~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 230 (355)
T 2eu9_A 156 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 230 (355)
T ss_dssp ESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred EecccccccccccccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHH
Confidence 9 567899999999998654332 2457999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCchhHHHHHHHHhhccCc--------c-ccc------c----------------ccccCCCHHHHHH
Q 001867 895 ELVTGRLPVDPEFGEKDLVKWVCSTLDQKGV--------D-HVL------D----------------PKLDCCFKEEICK 943 (1002)
Q Consensus 895 ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~------~----------------~~~~~~~~~~~~~ 943 (1002)
||++|+.||........ ...+......... . ... + +............
T Consensus 231 el~~g~~pf~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 2eu9_A 231 EYYRGFTLFQTHENREH-LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309 (355)
T ss_dssp HHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred HHHhCCCCCCCCCHHHH-HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHH
Confidence 99999999976533222 2222111110000 0 000 0 0000111223446
Q ss_pred HHHHHHHcCCCCCCCCCCHHHHH
Q 001867 944 VLNIGLLCTSPLPINRPAMRRVV 966 (1002)
Q Consensus 944 l~~l~~~cl~~dP~~Rps~~evl 966 (1002)
+.+++.+||+.||++|||++|++
T Consensus 310 l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 310 LFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHHHHHHHhcCChhhCcCHHHHh
Confidence 88999999999999999999987
No 274
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.7e-36 Score=334.86 Aligned_cols=257 Identities=30% Similarity=0.450 Sum_probs=161.7
Q ss_pred CCceEEccCccccC--CCChhhhccCcccceeeec-cccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEE
Q 001867 358 PLRWVDLSNNQFTG--EIPASLCEKGELEELLMIY-NSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLL 434 (1002)
Q Consensus 358 ~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 434 (1002)
+++.|+|++|.+++ .+|..+..+++|++|++++ |.+.+.+|..|+++++|++|+|++|++++.+|..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 35555555555555 4555555555555555552 55555555555555555555555555555555555555555555
Q ss_pred EcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccc-ccccccccccccCCCCcccccccccCCeeecCCCcC
Q 001867 435 ELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLK-SLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDL 513 (1002)
Q Consensus 435 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 513 (1002)
+|++|.+++.+|..+..+++|+.|++++|++++.+|..++.++ +|+.|++++|++++.+|..+..++ |+.|+|++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 5555555555555566666666666666666656666666665 666666666666666666666665 66666666666
Q ss_pred CcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChh-
Q 001867 514 SGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSL- 591 (1002)
Q Consensus 514 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~- 591 (1002)
++.+|..|+.+++|+.|+|++|.+++.+|. +..+++|++|+|++|+++|.+|..+..+ +|+.|+|++|+++|.+|..
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 666666666666666666666666655444 5666666666666666666666666666 5666666666666666654
Q ss_pred hhhhcccccccCCCCCCCCCCCCCC
Q 001867 592 FAKEMYRNSFLGNPGLCGDLEGLCD 616 (1002)
Q Consensus 592 ~~~~~~~~~~~~n~~~cg~~~~~c~ 616 (1002)
....+....+.|||++||.|...|+
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~~~C~ 313 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPLPACT 313 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTSSCCC
T ss_pred cccccChHHhcCCCCccCCCCCCCC
Confidence 4455666788899999999888884
No 275
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.9e-36 Score=339.58 Aligned_cols=259 Identities=21% Similarity=0.273 Sum_probs=199.8
Q ss_pred cCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-------
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR------- 754 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------- 754 (1002)
++|++.+.||+|+||.||+|+. .+++.||||++.. +....+.+.+|+.++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------------------~~~~~~~~~~e~~~l~~l~~~~~~~~ 80 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG------------------DKVYTEAAEDEIKLLQRVNDADNTKE 80 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------------------CHHHHHHHHHHHHHHHHHHHTCCSHH
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC------------------CccchhhhhHHHHHHHHhhcccccch
Confidence 5788899999999999999996 5689999999842 2334567889999999886
Q ss_pred ----CCceeeeeeEEecCC----eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCC
Q 001867 755 ----HKNIVKLWCCCTTRD----CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRD 826 (1002)
Q Consensus 755 ----h~niv~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrD 826 (1002)
||||+++++++...+ ..++||||+ +++|.+++.......+++..++.++.||+.||+|||++. +|+|||
T Consensus 81 ~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~D 157 (373)
T 1q8y_A 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTD 157 (373)
T ss_dssp HHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSC
T ss_pred hccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecC
Confidence 899999999998654 789999999 899999998766677999999999999999999999942 899999
Q ss_pred CCCCcEEEC------CCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCC
Q 001867 827 VKSNNILLD------GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGR 900 (1002)
Q Consensus 827 lk~~NIll~------~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~ 900 (1002)
|||+||+++ ..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 158 ikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 232 (373)
T 1q8y_A 158 IKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232 (373)
T ss_dssp CSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CChHHeEEeccCCCcCcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCC
Confidence 999999994 34479999999998765432 2346899999999999999999999999999999999999
Q ss_pred CCCCCCCCc-----hhHHHHHHHHhhccC-------------------cccccc----------ccccCCCHHHHHHHHH
Q 001867 901 LPVDPEFGE-----KDLVKWVCSTLDQKG-------------------VDHVLD----------PKLDCCFKEEICKVLN 946 (1002)
Q Consensus 901 ~p~~~~~~~-----~~~~~~~~~~~~~~~-------------------~~~~~~----------~~~~~~~~~~~~~l~~ 946 (1002)
.||...... .+....+........ ...+.. .............+.+
T Consensus 233 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (373)
T 1q8y_A 233 FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312 (373)
T ss_dssp CCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHH
T ss_pred CCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHH
Confidence 999754321 111111111100000 000000 0001233556677899
Q ss_pred HHHHcCCCCCCCCCCHHHHHH
Q 001867 947 IGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 947 l~~~cl~~dP~~Rps~~evl~ 967 (1002)
++.+||+.||++|||++|+++
T Consensus 313 li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 313 FLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHGGGGCSSTTTCBCHHHHHT
T ss_pred HHHHHhccCccccCCHHHHhh
Confidence 999999999999999999986
No 276
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=328.09 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=181.8
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||||++.... ......+.+..+..+++.++||||++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~~~~~~~~~~h~~i~~ 88 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG---------------NKEENKRILMDLDVVLKSHDCPYIVQ 88 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS---------------CHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc---------------cchHHHHHHHHHHHHHHhcCCCceee
Confidence 467888899999999999999975 68999999985421 12223344555666788889999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeeeCCCCCCcEEECCCCC
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHH-DCVPSIVHRDVKSNNILLDGDFG 839 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~iiHrDlk~~NIll~~~~~ 839 (1002)
+++++.+.+..++||||+ ++.+..+... ....+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.
T Consensus 89 ~~~~~~~~~~~~lv~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~ 163 (318)
T 2dyl_A 89 CFGTFITNTDVFIAMELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQ 163 (318)
T ss_dssp EEEEEECSSEEEEEECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSC
T ss_pred EEEEEecCCcEEEEEecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCC
Confidence 999999999999999999 5555555543 34679999999999999999999998 6 8999999999999999999
Q ss_pred eEEccccCcccccCCCCCcccccccccccccCccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHH
Q 001867 840 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAY-----TLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVK 914 (1002)
Q Consensus 840 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~ 914 (1002)
+||+|||++........ .....||+.|+|||++. ...++.++||||||+++|||++|+.||.......+...
T Consensus 164 ~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 240 (318)
T 2dyl_A 164 IKLCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT 240 (318)
T ss_dssp EEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred EEEEECCCchhccCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 99999999976654322 22446899999999984 55688999999999999999999999976433333222
Q ss_pred HHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 915 WVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... .. .... +....... .+.+++.+||+.||.+||+++|+++
T Consensus 241 ~~~~---~~-~~~~--~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 241 KVLQ---EE-PPLL--PGHMGFSG----DFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHH---SC-CCCC--CSSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHhc---cC-CCCC--CccCCCCH----HHHHHHHHHccCChhHCcCHHHHhh
Confidence 2211 11 1100 11112222 4778999999999999999999986
No 277
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.4e-36 Score=360.16 Aligned_cols=333 Identities=19% Similarity=0.176 Sum_probs=227.5
Q ss_pred ccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCC-cceee
Q 001867 237 LAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLP-LESLN 315 (1002)
Q Consensus 237 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~ 315 (1002)
+.+++.|++++|.+....+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..+..++ |+.|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45666777777777766555666677777777777777766666677777777777777776665555554443 55555
Q ss_pred cCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeecccccc
Q 001867 316 LYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTG 395 (1002)
Q Consensus 316 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 395 (1002)
|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+++ +
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------~ 185 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT------------------------H 185 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS------------------------B
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC------------------------C
Confidence 5555555444444445555555555555555444444555555555555555544 3
Q ss_pred CCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccc
Q 001867 396 QLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGF 475 (1002)
Q Consensus 396 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 475 (1002)
. .++.+++|+.|++++|.+++ +...++|+.|++++|.+....+.. .++|+.|+|++|++++ +..++.
T Consensus 186 ~---~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 186 V---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp C---CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGG
T ss_pred c---ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--Chhhcc
Confidence 2 13445566666666666653 223345666667766665443222 2578888888888875 467888
Q ss_pred ccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEe
Q 001867 476 LKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLD 555 (1002)
Q Consensus 476 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~ 555 (1002)
+++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..++.+++|++|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 8888888888888888778888888888888888888885 5777778888889999988888 6888888888999999
Q ss_pred CcceeeecccCCccccc-ccceEEeccccCcCCCChhhhhhcccccccCCCCCCCCC
Q 001867 556 LSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSLFAKEMYRNSFLGNPGLCGDL 611 (1002)
Q Consensus 556 Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~n~~~cg~~ 611 (1002)
|++|++++.. +..+ +|+.|+|++|++++..+......+....+.+++..|+.+
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCcc
Confidence 9999888643 3445 688899999998876555556667777889999999974
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-35 Score=338.59 Aligned_cols=333 Identities=18% Similarity=0.173 Sum_probs=215.3
Q ss_pred ccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCC-cceee
Q 001867 237 LAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLP-LESLN 315 (1002)
Q Consensus 237 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~ 315 (1002)
+++++.|++++|.++...+..|..+++|+.|++++|.+++..+..|..+++|++|++++|++++..|..+..++ |+.|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45666666766666655444566666666666666666665555666666666666666666655555444443 55555
Q ss_pred cCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeecccccc
Q 001867 316 LYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTG 395 (1002)
Q Consensus 316 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 395 (1002)
|++|+++...+..|..+++|++|++++|++.+..|..+..+++| ++|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L------------------------~~L~l~~n~l~~ 179 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL------------------------QNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTC------------------------CEEECCSSCCSB
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCC------------------------CEEECCCCcCCc
Confidence 55555553333334444555555555555444444444444444 444444444443
Q ss_pred CCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccc
Q 001867 396 QLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGF 475 (1002)
Q Consensus 396 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 475 (1002)
. .++.+++|+.|++++|.+++ +...++|+.|++++|.+..... ...++|+.|++++|++++. ..++.
T Consensus 180 ~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 180 V---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRG---PVNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp C---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEEEC---CCCSSCCEEECCSSCCCCC--GGGGG
T ss_pred c---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeeccc---cccccccEEECCCCCCccc--HHHcC
Confidence 2 13445566666666666553 2223456666666666664422 1236777888888887743 56777
Q ss_pred ccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEe
Q 001867 476 LKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLD 555 (1002)
Q Consensus 476 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~ 555 (1002)
+++|+.|++++|++++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..++.+++|++|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 8888888888888887777788888888888888888874 5666677888888888888887 6777788888888888
Q ss_pred CcceeeecccCCccccc-ccceEEeccccCcCCCChhhhhhcccccccCCCCCCCCC
Q 001867 556 LSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSLFAKEMYRNSFLGNPGLCGDL 611 (1002)
Q Consensus 556 Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~n~~~cg~~ 611 (1002)
|++|++++. | +..+ +|+.|++++|++++.........+.+..+.+++..|..+
T Consensus 325 L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 325 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCTT
T ss_pred CCCCcccee-C--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceeccc
Confidence 888888753 3 4445 688888888888765444455666777788899899864
No 279
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.8e-36 Score=344.17 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=185.0
Q ss_pred CCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCceeeee
Q 001867 684 GLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIVKLW 762 (1002)
Q Consensus 684 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 762 (1002)
+|+..++||+|+||+||.....+++.||||++... ....+.+|+.+++++ +|||||+++
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~--------------------~~~~~~~E~~~l~~l~~HpnIv~l~ 84 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE--------------------CFSFADREVQLLRESDEHPNVIRYF 84 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT--------------------TEEECHHHHHHHHHSCCCTTBCCEE
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH--------------------HHHHHHHHHHHHHhccCCCCcCeEE
Confidence 47778899999999977655667999999998432 112356899999999 799999999
Q ss_pred eEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC-----
Q 001867 763 CCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD----- 837 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~----- 837 (1002)
+++.+.+..|+||||++ |+|.+++.... ...++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 85 ~~~~~~~~~~lv~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~ 159 (432)
T 3p23_A 85 CTEKDRQFQYIAIELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGK 159 (432)
T ss_dssp EEEEETTEEEEEEECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTB
T ss_pred EEEecCCEEEEEEECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCc
Confidence 99999999999999995 69999998643 3455566789999999999999999 99999999999999532
Q ss_pred CCeEEccccCcccccCCCCC-cccccccccccccCccccc---cCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCchhH
Q 001867 838 FGARVADFGVAKVVDASGKP-KSMSVIAGSCGYIAPEYAY---TLRVNEKSDIYSFGVVILELVT-GRLPVDPEFGEKDL 912 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~ell~-g~~p~~~~~~~~~~ 912 (1002)
..+||+|||+++........ .......||+.|+|||++. ...++.++||||+||++|||++ |..||.......
T Consensus 160 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-- 237 (432)
T 3p23_A 160 IKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-- 237 (432)
T ss_dssp CCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH--
T ss_pred eeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH--
Confidence 35789999999877543221 2234567999999999987 4567889999999999999999 888985432211
Q ss_pred HHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 913 VKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... ....... ... ........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~---~~~~~~~-~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 238 ANIL---LGACSLD-CLH-----PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHH---TTCCCCT-TSC-----TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHH---hccCCcc-ccC-----ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111 1111111 011 11122334678999999999999999999983
No 280
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.9e-35 Score=329.34 Aligned_cols=255 Identities=23% Similarity=0.338 Sum_probs=176.8
Q ss_pred cCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHH-HHhcCCCCceee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVE-TLGKIRHKNIVK 760 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~ 760 (1002)
++|++.+.||+|+||.||+|... +++.||||++.... ......++..|+. +++.++||||++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~~~~~~~h~niv~ 85 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV----------------DEKEQKQLLMDLDVVMRSSDCPYIVQ 85 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC----------------CHHHHHHHHHHHHHHHSSCCCTTBCC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc----------------CchHHHHHHHHHHHHHHcCCCCcEee
Confidence 56788899999999999999974 68999999985421 1223445556665 777789999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCC
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHS---CKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGD 837 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~ 837 (1002)
+++++...+..++||||++ |+|.+++.. .....+++..+..++.|++.||+|||++ .+|+||||||+||+++.+
T Consensus 86 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~ 162 (327)
T 3aln_A 86 FYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRS 162 (327)
T ss_dssp EEEEEECSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETT
T ss_pred eeeEEEeCCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCC
Confidence 9999999999999999996 588887753 2356799999999999999999999985 289999999999999999
Q ss_pred CCeEEccccCcccccCCCCCcccccccccccccCcccc----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHH
Q 001867 838 FGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYA----YTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV 913 (1002)
Q Consensus 838 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~ 913 (1002)
+.+||+|||+++....... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||.......+
T Consensus 163 ~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-- 237 (327)
T 3aln_A 163 GNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-- 237 (327)
T ss_dssp TEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------
T ss_pred CCEEEccCCCceecccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH--
Confidence 9999999999987654322 2234689999999998 466789999999999999999999999975322111
Q ss_pred HHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 914 KWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
...... ................. .+.+++.+||+.||++||+++|+++
T Consensus 238 -~~~~~~-~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 238 -QLTQVV-KGDPPQLSNSEEREFSP----SFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp ---CCCC-CSCCCCCCCCSSCCCCH----HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -HHHHHh-cCCCCCCCCcccccCCH----HHHHHHHHHhhCChhhCcCHHHHHh
Confidence 110000 11111111111112222 4788999999999999999999985
No 281
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-35 Score=338.19 Aligned_cols=351 Identities=19% Similarity=0.142 Sum_probs=211.7
Q ss_pred cCCCCCCCCCCCCCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccc
Q 001867 44 LSSWGRNPRDDSPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLD 123 (1002)
Q Consensus 44 l~sw~~~~~~~~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 123 (1002)
+++|... ..+||.|.++.|.....++ +-...... ....-..++++++|++++|.++...+..|..+++|++|+
T Consensus 3 ~~~~~~~--~~C~~~~~~~~c~~~~~~i---~~~~~~~~--~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~ 75 (390)
T 3o6n_A 3 VKPRQPE--YKCIDSNLQYDCVFYDVHI---DMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLN 75 (390)
T ss_dssp ----CCE--ECBCC------EEEESCEE---CSSCCCCE--ESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEE
T ss_pred cCCCCCc--cceehhhhhhccceeeeee---eccccccc--ccccccccCCceEEEecCCchhhCChhHhcccccCcEEE
Confidence 5788542 2234456666665332222 11111111 111223467889999999988865555678888999999
Q ss_pred cccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCC
Q 001867 124 LSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLP 203 (1002)
Q Consensus 124 Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~ 203 (1002)
|++|.+++..+..|..+++|++|+|++|++++..|..|+++++|++|+|++|+++...+..|+++++|++|+|++|++ .
T Consensus 76 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l-~ 154 (390)
T 3o6n_A 76 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNL-E 154 (390)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-C
T ss_pred CCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCcc-C
Confidence 999988877777888888999999999988887788888888888888888888866666678888888888888876 3
Q ss_pred CCCCcccCCCCccchhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccc
Q 001867 204 GRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWS 283 (1002)
Q Consensus 204 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 283 (1002)
+..|..+..+++|++|++++|++++. .++.+++|+.|++++|.+++. ....+|+.|++++|.+... |..
T Consensus 155 ~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~-- 223 (390)
T 3o6n_A 155 RIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP-- 223 (390)
T ss_dssp BCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--
T ss_pred ccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--
Confidence 34455677777777777777777743 245566677777777766532 2234556666666665533 211
Q ss_pred cccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEE
Q 001867 284 NLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVD 363 (1002)
Q Consensus 284 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 363 (1002)
..++|+.|++++|++++. ..+..+++|++|++++|++++..|..|..+++|+.|+
T Consensus 224 ~~~~L~~L~l~~n~l~~~-------------------------~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (390)
T 3o6n_A 224 VNVELTILKLQHNNLTDT-------------------------AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 278 (390)
T ss_dssp CCSSCCEEECCSSCCCCC-------------------------GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred ccccccEEECCCCCCccc-------------------------HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEE
Confidence 124555555555555532 2344445555555555555544445555555555555
Q ss_pred ccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccC
Q 001867 364 LSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSG 443 (1002)
Q Consensus 364 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 443 (1002)
|++|++++ +|..+..+++|++|++++|.++ .+|..+..+++|++|+|++|++++. + +..+++|+.|++++|.+..
T Consensus 279 L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 279 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 55555542 3333444555555555555555 3444455566666666666666543 2 4556666677777776654
No 282
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.2e-36 Score=333.29 Aligned_cols=246 Identities=20% Similarity=0.339 Sum_probs=197.6
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC--CCce
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR--HKNI 758 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~ni 758 (1002)
.++|++.+.||+|+||.||+|.. .+++.||||++....... .......+.+.+|+.++++++ ||||
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~~~~E~~~l~~l~~~~~~i 110 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD-----------WGELPNGTRVPMEVVLLKKVSSGFSGV 110 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCC-----------EEECTTCCEEEHHHHHHHHHCSSSCSB
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchh-----------hhhhhhhhHHHHHHHHHHhhccCCCCc
Confidence 45788899999999999999986 468899999986542211 001122355778999999996 5999
Q ss_pred eeeeeEEecCCeeeEEEeccCC-CChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC-C
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPN-GSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD-G 836 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~-~ 836 (1002)
+++++++...+..++||||+.+ ++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++ .
T Consensus 111 ~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLN 185 (320)
T ss_dssp CCEEEEEECSSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETT
T ss_pred eEEEEEEecCCcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCC
Confidence 9999999999999999999976 899999985 35689999999999999999999999 999999999999999 7
Q ss_pred CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 837 DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV-NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 837 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
++.+||+|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||... . ..
T Consensus 186 ~~~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~---~---~~ 255 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---E---EI 255 (320)
T ss_dssp TTEEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH---H---HH
T ss_pred CCCEEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh---h---hh
Confidence 7899999999998765432 223468999999999887766 67899999999999999999999542 1 11
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.. . .. ... ..... ++.+++.+||+.||++|||++|+++
T Consensus 256 ~~----~-~~--~~~---~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 IR----G-QV--FFR---QRVSS----ECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HH----C-CC--CCS---SCCCH----HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hc----c-cc--ccc---ccCCH----HHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 0 00 001 11222 4778999999999999999999986
No 283
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=329.34 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=190.1
Q ss_pred HhcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC----CC
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI----RH 755 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~h 755 (1002)
+.++|++.+.||+|+||.||+|.. .+++.||||++....... .........+.+|+.+++++ +|
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~~~~e~~~l~~l~~~~~h 97 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLG-----------WSPLSDSVTCPLEVALLWKVGAGGGH 97 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC-------------------CCCCHHHHHHHHHHSSCCC
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccc-----------cccchhhHHHHHHHHHHHhhcccCCC
Confidence 356799999999999999999986 568899999985432110 01112344567789999888 89
Q ss_pred CceeeeeeEEecCCeeeEEEec-cCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEE
Q 001867 756 KNIVKLWCCCTTRDCKLLVYEY-MPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILL 834 (1002)
Q Consensus 756 ~niv~l~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll 834 (1002)
|||+++++++...+..++|||| +++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 98 ~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 172 (312)
T 2iwi_A 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILI 172 (312)
T ss_dssp SSBCCEEEEC-----CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEE
T ss_pred CCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEE
Confidence 9999999999999999999999 789999999985 34699999999999999999999999 99999999999999
Q ss_pred C-CCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCC-CccchhhHHHHHHHHHhCCCCCCCCCCchhH
Q 001867 835 D-GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVN-EKSDIYSFGVVILELVTGRLPVDPEFGEKDL 912 (1002)
Q Consensus 835 ~-~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~ell~g~~p~~~~~~~~~~ 912 (1002)
+ .++.+||+|||+++...... .....||..|+|||++.+..+. .++||||+|+++|||++|+.||... .
T Consensus 173 ~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~---~-- 243 (312)
T 2iwi_A 173 DLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD---Q-- 243 (312)
T ss_dssp ETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH---H--
T ss_pred eCCCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh---H--
Confidence 9 88999999999998765432 2345689999999998877764 5899999999999999999999632 1
Q ss_pred HHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 913 VKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
..... ... + ..... ..+.+++.+||+.||++|||++|+++
T Consensus 244 -~~~~~-----~~~--~---~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 -EILEA-----ELH--F---PAHVS----PDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -HHHHT-----CCC--C---CTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -HHhhh-----ccC--C---cccCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11110 000 0 01122 24778999999999999999999986
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.8e-35 Score=349.96 Aligned_cols=268 Identities=23% Similarity=0.312 Sum_probs=202.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|.. .+|+.||||++... ......+.+.+|++++++++||||++
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~----------------~~~~~~~~~~~Ei~iL~~L~HpnIV~ 76 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE----------------LSPKNRERWCLEIQIMKKLNHPNVVS 76 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC----------------CCHHHHHHHHHHHHHHHHCCBTTBCC
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc----------------CCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 47899999999999999999996 46899999987432 12345677999999999999999999
Q ss_pred eeeEEec------CCeeeEEEeccCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEE
Q 001867 761 LWCCCTT------RDCKLLVYEYMPNGSLGDLLHSCKG-GLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNIL 833 (1002)
Q Consensus 761 l~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIl 833 (1002)
+++++.. .+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 77 l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NIL 153 (676)
T 3qa8_A 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIV 153 (676)
T ss_dssp EEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEE
T ss_pred eeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeE
Confidence 9998765 6778999999999999999986332 3689999999999999999999999 9999999999999
Q ss_pred ECCCCC---eEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCch
Q 001867 834 LDGDFG---ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK 910 (1002)
Q Consensus 834 l~~~~~---~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~ 910 (1002)
++.++. +||+|||++........ .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......
T Consensus 154 l~~~g~~~~vKL~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~- 229 (676)
T 3qa8_A 154 LQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP- 229 (676)
T ss_dssp EECCSSSCEEEECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-
T ss_pred eecCCCceeEEEcccccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-
Confidence 997765 89999999987755432 23457999999999999999999999999999999999999999754221
Q ss_pred hHHHHHHHHhh--------ccCccc--cc---cccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHHh
Q 001867 911 DLVKWVCSTLD--------QKGVDH--VL---DPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRR-----VVKLLQEV 972 (1002)
Q Consensus 911 ~~~~~~~~~~~--------~~~~~~--~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e-----vl~~L~~~ 972 (1002)
..|...... ...... .. .+............+.+++.+|++.||++|||++| +.+.++++
T Consensus 230 --~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i 307 (676)
T 3qa8_A 230 --VQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307 (676)
T ss_dssp --HHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred --hhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence 111100000 000000 00 01112223334456889999999999999999988 55666666
Q ss_pred hh
Q 001867 973 GA 974 (1002)
Q Consensus 973 ~~ 974 (1002)
..
T Consensus 308 L~ 309 (676)
T 3qa8_A 308 LS 309 (676)
T ss_dssp HC
T ss_pred Hh
Confidence 53
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1e-34 Score=350.11 Aligned_cols=312 Identities=20% Similarity=0.150 Sum_probs=205.8
Q ss_pred CCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCccccccccccee
Q 001867 91 RLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVI 170 (1002)
Q Consensus 91 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 170 (1002)
.+++++.|++++|.+..+.+..|..+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 45688888888888877666667778888888888888887777788888888888888888887777778888888888
Q ss_pred eeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccccchhcccCccc
Q 001867 171 SLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNL 250 (1002)
Q Consensus 171 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 250 (1002)
+|++|.+++.++..|+++++|++|+|++|.+ .+..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.+
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNL-ERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLL 204 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-CBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCC
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcC-CCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcc
Confidence 8888888866666677778888888877775 3444556777777777777777776432 44455666666666665
Q ss_pred ccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccC
Q 001867 251 VGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIA 330 (1002)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~ 330 (1002)
++. ....+|+.|++++|.+....+.. .++ |+.|+|++|.+++ +..+.
T Consensus 205 ~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~-----------------------L~~L~L~~n~l~~--~~~l~ 251 (597)
T 3oja_B 205 STL-----AIPIAVEELDASHNSINVVRGPV---NVE-----------------------LTILKLQHNNLTD--TAWLL 251 (597)
T ss_dssp SEE-----ECCTTCSEEECCSSCCCEEECSC---CSC-----------------------CCEEECCSSCCCC--CGGGG
T ss_pred ccc-----cCCchhheeeccCCccccccccc---CCC-----------------------CCEEECCCCCCCC--Chhhc
Confidence 532 22234555555555554322211 134 4455555555543 24455
Q ss_pred CCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEE
Q 001867 331 DSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRV 410 (1002)
Q Consensus 331 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 410 (1002)
.+++|++|+|++|.+.+..|..|..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++ .+|..+..+++|++|
T Consensus 252 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 252 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred cCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 55666666666666665556666666666666666666663 3444555666666666666666 455556667777777
Q ss_pred EccCccccCCCCCcCCCCCcceEEEcccCcccCc
Q 001867 411 RLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGE 444 (1002)
Q Consensus 411 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~ 444 (1002)
+|++|++++.. +..+++|+.|++++|.+.+.
T Consensus 330 ~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 330 YLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp ECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred ECCCCCCCCcC---hhhcCCCCEEEeeCCCCCCh
Confidence 77777776442 55667777788888877643
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.1e-35 Score=316.75 Aligned_cols=235 Identities=13% Similarity=0.067 Sum_probs=184.3
Q ss_pred hcCCCcCCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
.++|++.+.||+|+||.||+|... +++.||||++.... ..+....+.+.+|+.++.+++||||++
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~hp~iv~ 95 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQG--------------VLPDDVLQETLSRTLRLSRIDKPGVAR 95 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTC--------------CSCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccc--------------ccCHHHHHHHHHHHHHHhcCCCCCcce
Confidence 356888999999999999999975 48999999985431 112345678999999999999999999
Q ss_pred eeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCe
Q 001867 761 LWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGA 840 (1002)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~ 840 (1002)
+++++.+.+..|+||||+++++|.++++. + ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 96 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~ 168 (286)
T 3uqc_A 96 VLDVVHTRAGGLVVAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDV 168 (286)
T ss_dssp EEEEEEETTEEEEEEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCE
T ss_pred eeEEEEECCcEEEEEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCE
Confidence 99999999999999999999999999963 2 46667899999999999999999 99999999999999999999
Q ss_pred EEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 001867 841 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTL 920 (1002)
Q Consensus 841 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~ 920 (1002)
||+++| |++| ++.++|||||||++|||++|+.||............
T Consensus 169 kl~~~~----------------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~----- 214 (286)
T 3uqc_A 169 VLAYPA----------------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA----- 214 (286)
T ss_dssp EECSCC----------------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-----
T ss_pred EEEecc----------------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-----
Confidence 998543 3433 688999999999999999999999765332211000
Q ss_pred hccCcccccc--ccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhhc
Q 001867 921 DQKGVDHVLD--PKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVKLLQEVGAEN 976 (1002)
Q Consensus 921 ~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 976 (1002)
.......... ......+ ..+.+++.+||+.||++| |++|+++.|+++....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 215 ERDTAGQPIEPADIDRDIP----FQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp CBCTTSCBCCHHHHCTTSC----HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HHHhccCCCChhhcccCCC----HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0000000000 0001222 247889999999999999 9999999999987543
No 287
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-34 Score=330.49 Aligned_cols=242 Identities=17% Similarity=0.138 Sum_probs=178.5
Q ss_pred CCCcCCeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC-Cceee-
Q 001867 684 GLDEDNVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH-KNIVK- 760 (1002)
Q Consensus 684 ~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~- 760 (1002)
.|...+.||+|+||.||+|.+ .+|+.||||++..... ......+.+.+|+.+++.++| ++...
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~--------------~~~~~~~~~~~E~~~~~~l~~~~~~~~~ 144 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER--------------PPSNAIKQMKEEVLRLRLLRGIKNQKQA 144 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------------------CCHHHHHHHHGGGGSTTCCSHHHH
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC--------------ccHHHHHHHHHHHHHHHhhccCCCHHHH
Confidence 456678999999999999995 5689999998853211 122335678999999999976 22111
Q ss_pred --------------------eeeEEec-----CCeeeEEEeccCCCChhhhhhh-----cCCCCCCHHHHHHHHHHHHHH
Q 001867 761 --------------------LWCCCTT-----RDCKLLVYEYMPNGSLGDLLHS-----CKGGLLDWPTRYKIIVDAAEG 810 (1002)
Q Consensus 761 --------------------l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~-----~~~~~l~~~~~~~i~~qi~~~ 810 (1002)
+..++.. ....+++|+++ +++|.++++. .....+++..++.++.|++.|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~a 223 (413)
T 3dzo_A 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 223 (413)
T ss_dssp HHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHH
Confidence 1111111 22457777776 7899999852 234568888999999999999
Q ss_pred HHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCcccc----------ccCCC
Q 001867 811 LSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYA----------YTLRV 880 (1002)
Q Consensus 811 L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~ 880 (1002)
|+|||++ +|+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..+
T Consensus 224 L~~LH~~---~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~ 294 (413)
T 3dzo_A 224 LASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLM 294 (413)
T ss_dssp HHHHHHT---TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEE
T ss_pred HHHHHhC---CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCC
Confidence 9999999 9999999999999999999999999999865433 334567 999999998 55568
Q ss_pred CCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 001867 881 NEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP 960 (1002)
Q Consensus 881 ~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 960 (1002)
+.++|||||||++|||++|+.||........ ...++. .....+ ..+.+++.+||+.||++||
T Consensus 295 ~~~~DvwSlGvil~elltg~~Pf~~~~~~~~-------------~~~~~~-~~~~~~----~~~~~li~~~l~~dP~~Rp 356 (413)
T 3dzo_A 295 TFAFDTWTLGLAIYWIWCADLPNTDDAALGG-------------SEWIFR-SCKNIP----QPVRALLEGFLRYPKEDRL 356 (413)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC-------------SGGGGS-SCCCCC----HHHHHHHHHHTCSSGGGSC
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCcchhhh-------------HHHHHh-hcccCC----HHHHHHHHHHccCChhhCc
Confidence 8899999999999999999999975422111 111111 112222 3488899999999999999
Q ss_pred CHHHHHH
Q 001867 961 AMRRVVK 967 (1002)
Q Consensus 961 s~~evl~ 967 (1002)
++.++++
T Consensus 357 t~~~~l~ 363 (413)
T 3dzo_A 357 LPLQAME 363 (413)
T ss_dssp CHHHHTT
T ss_pred CHHHHHh
Confidence 9777753
No 288
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5.1e-34 Score=313.41 Aligned_cols=231 Identities=23% Similarity=0.311 Sum_probs=179.9
Q ss_pred HHHhcCCCcC-CeeeecCCccEEEEEE-cCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHH-hcCCC
Q 001867 679 YEILDGLDED-NVIGSGSSGKVYKVVL-SNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETL-GKIRH 755 (1002)
Q Consensus 679 ~~~~~~~~~~-~~LG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h 755 (1002)
..+.++|.+. +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+|
T Consensus 13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----------------------~~~~~~e~~~~~~~~~h 70 (299)
T 3m2w_A 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----------------------CPKARREVELHWRASQC 70 (299)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----------------------SHHHHHHHHHHHHHTTS
T ss_pred cccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----------------------cHHHHHHHHHHHHhccC
Confidence 3456777776 7899999999999997 5689999999832 23467888888 55689
Q ss_pred CceeeeeeEEec----CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCc
Q 001867 756 KNIVKLWCCCTT----RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNN 831 (1002)
Q Consensus 756 ~niv~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~N 831 (1002)
|||+++++++.. ....++||||+++|+|.+++.......+++..++.++.|++.||+|||++ +|+||||||+|
T Consensus 71 ~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~N 147 (299)
T 3m2w_A 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPEN 147 (299)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence 999999999986 67789999999999999999876666899999999999999999999999 99999999999
Q ss_pred EEECC---CCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCC
Q 001867 832 ILLDG---DFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFG 908 (1002)
Q Consensus 832 Ill~~---~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~ 908 (1002)
|+++. ++.+||+|||++..... ..++.++||||+||++|||++|+.||.....
T Consensus 148 il~~~~~~~~~~kl~Dfg~a~~~~~------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 203 (299)
T 3m2w_A 148 LLYTSKRPNAILKLTDFGFAKETTG------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 203 (299)
T ss_dssp EEESSSSTTCCEEECCCTTCEECTT------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred EEEecCCCCCcEEEecccccccccc------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 99997 78899999999865421 3357789999999999999999999965422
Q ss_pred chhHHHHHHHHhhccCcc-c--cccccccCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 001867 909 EKDLVKWVCSTLDQKGVD-H--VLDPKLDCCFKEEICKVLNIGLLCTSPLPINRPAMRRVVK 967 (1002)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 967 (1002)
.... ......... . ...+...... ..+.+++.+||+.||++|||++|+++
T Consensus 204 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 204 LAIS-----PGMKTRIRMGQYEFPNPEWSEVS----EEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp ---------CCSCCSSCTTCCSSCHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhh-----HHHHHHHhhccccCCchhcccCC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1100 000000000 0 0000001122 35788999999999999999999997
No 289
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.2e-34 Score=321.78 Aligned_cols=275 Identities=21% Similarity=0.314 Sum_probs=231.3
Q ss_pred CCCCchHHHHHHHHHHHhc-cCCccccCCCCC-CCCCCCCCccceeEEe--------CCCCeEEEEEcCCCCcCCCCCcc
Q 001867 19 PSLSLNQEGLYLERVKLSL-SDPDSALSSWGR-NPRDDSPCSWRGVECD--------PRSHSVASIDLSNANIAGPFPSL 88 (1002)
Q Consensus 19 ~~~~~~~~~~~l~~~k~~~-~d~~~~l~sw~~-~~~~~~~C~w~gv~C~--------~~~~~v~~l~L~~~~l~~~~~~~ 88 (1002)
...+...|+.||++||+++ .||.+.+++|.. .....++|.|.|+.|+ ....+|+.|+|++++++ .+|..
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 3446778999999999998 688888899941 1124678999999995 23467999999999998 67888
Q ss_pred ccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCccccc-----
Q 001867 89 LCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGR----- 163 (1002)
Q Consensus 89 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~----- 163 (1002)
+.++++|++|+|++|.++ .+|..|+.+++|++|+|++|.++ .+|..+.++++|++|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 888999999999999998 78999999999999999999999 77889999999999999999988899987765
Q ss_pred ----ccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccc
Q 001867 164 ----FQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAK 239 (1002)
Q Consensus 164 ----l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 239 (1002)
+++|++|+|++|+++ .+|..++++++|++|+|++|++. .+|..++.+++|++|+|++|++.+.+|..++.+++
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~--~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~ 254 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS--ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAP 254 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC--CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC--cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCC
Confidence 888888888888888 77778888888888888888873 57777888888888888888888888888888888
Q ss_pred cchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccC
Q 001867 240 LVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLT 299 (1002)
Q Consensus 240 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 299 (1002)
|++|+|++|++.+.+|..+.++++|+.|+|++|.+.+.+|..+.++++|+.+++..|.+.
T Consensus 255 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 255 LKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 888888888888888888888888888888888888888888888888888888777665
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-34 Score=349.67 Aligned_cols=240 Identities=22% Similarity=0.269 Sum_probs=192.2
Q ss_pred cCCCcCCeeeecCCccEEEEEEc--CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceee
Q 001867 683 DGLDEDNVIGSGSSGKVYKVVLS--NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVK 760 (1002)
Q Consensus 683 ~~~~~~~~LG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 760 (1002)
++|++.+.||+|+||.||+|.+. +++.||||++... .+....+.+.+|+.++++++||||++
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~hp~iv~ 143 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS----------------GDAEAQAMAMAERQFLAEVVHPSIVQ 143 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS----------------CCHHHHHHHHHHHGGGGGCCCTTBCC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc----------------CCHHHHHHHHHHHHHHHhcCCCCcCe
Confidence 67888999999999999999975 5899999987431 12344667899999999999999999
Q ss_pred eeeEEecCCe-----eeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 761 LWCCCTTRDC-----KLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 761 l~~~~~~~~~-----~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
+++++...+. .|+||||+++++|.+++.. .+++..++.++.||+.||+|||++ +|+||||||+||+++
T Consensus 144 ~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~ 216 (681)
T 2pzi_A 144 IFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLT 216 (681)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred EeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEe
Confidence 9999987655 6999999999999988752 699999999999999999999999 999999999999998
Q ss_pred CCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCCCCCCCchhHHHH
Q 001867 836 GDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW 915 (1002)
Q Consensus 836 ~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~~~~~~~~~~~~~ 915 (1002)
.+ .+||+|||+++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||.......
T Consensus 217 ~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----- 283 (681)
T 2pzi_A 217 EE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG----- 283 (681)
T ss_dssp SS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS-----
T ss_pred CC-cEEEEecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc-----
Confidence 75 9999999999876543 245699999999988765 4889999999999999999988875321100
Q ss_pred HHHHhhccCccccccccccCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHHhh
Q 001867 916 VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLLCTSPLPINRP-AMRRVVKLLQEVG 973 (1002)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~evl~~L~~~~ 973 (1002)
.. .. .........+.+++.+||+.||++|| +++++.+.+..+.
T Consensus 284 ---------~~---~~---~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 284 ---------LP---ED---DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp ---------CC---TT---CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ---------cc---cc---ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 00 00 00011223578899999999999999 5677777776553
No 291
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.5e-33 Score=312.97 Aligned_cols=305 Identities=25% Similarity=0.345 Sum_probs=157.9
Q ss_pred cccccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCC-Ccc
Q 001867 234 LGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRL-PLE 312 (1002)
Q Consensus 234 ~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~ 312 (1002)
+..+++|++|++++|.+... + .+..+++|++|++++|++++..+ +..+++|++|++++|++++ ++ .+..+ .|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 45667777777777777643 2 36667777777777777764433 6667777777777776663 22 23333 255
Q ss_pred eeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccc
Q 001867 313 SLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNS 392 (1002)
Q Consensus 313 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 392 (1002)
+|++++|++++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~------------------ 172 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP------------------ 172 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG------------------
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh------------------
Confidence 55555555553322 4455555555555554332222 24455555555555555543222
Q ss_pred cccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccc
Q 001867 393 FTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEE 472 (1002)
Q Consensus 393 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 472 (1002)
+..+++|++|++++|++++..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|++++..+
T Consensus 173 --------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 173 --------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp --------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred --------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 4444455555555555443222 4444555555555555544333 4445555555555555543222
Q ss_pred cccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCcccccccc
Q 001867 473 IGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLN 552 (1002)
Q Consensus 473 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~ 552 (1002)
+..+++|+.|++++|++++ + ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|.+++..|..++.+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 4455555555555555553 2 2345555555555555555543 2345555555555555555555555555555555
Q ss_pred EEeCcceeeecccCCccccc-ccceEEeccccCc
Q 001867 553 YLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLS 585 (1002)
Q Consensus 553 ~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~ 585 (1002)
+|+|++|++++..| +..+ +|+.|++++|+++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 55555555554434 3344 4555555555543
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.4e-33 Score=312.35 Aligned_cols=308 Identities=24% Similarity=0.332 Sum_probs=233.4
Q ss_pred cccCCCCccchhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccc
Q 001867 208 PELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTS 287 (1002)
Q Consensus 208 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 287 (1002)
..+..+++|+.|++++|.+.. ++ .+..+++|++|++++|++++..+ +..+++|++|++++|.+++. ..+..+++
T Consensus 38 ~~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~ 111 (347)
T 4fmz_A 38 VTQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTN 111 (347)
T ss_dssp ECHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred ccchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCc
Confidence 345678899999999999984 44 48999999999999999996544 99999999999999999863 36999999
Q ss_pred cceeeccccccCCCCCccCCCC-CcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccC
Q 001867 288 LRLLDASMNDLTGPIPDDLTRL-PLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSN 366 (1002)
Q Consensus 288 L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 366 (1002)
|++|++++|++++..+ +..+ .|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++
T Consensus 112 L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~ 186 (347)
T 4fmz_A 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNY 186 (347)
T ss_dssp CSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTT
T ss_pred CCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccC
Confidence 9999999999996444 5555 49999999997665544 48999999999999999986655 88999999999999
Q ss_pred ccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccc
Q 001867 367 NQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEIS 446 (1002)
Q Consensus 367 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~ 446 (1002)
|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++ ..+
T Consensus 187 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~------------------------~~~ 238 (347)
T 4fmz_A 187 NQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD------------------------LSP 238 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC------------------------CGG
T ss_pred Cccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC------------------------Ccc
Confidence 99985433 5555666666666665554333 4555555555555555543 322
Q ss_pred cccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccc
Q 001867 447 KNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKK 526 (1002)
Q Consensus 447 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 526 (1002)
+..+++|+.|++++|++++ + +.+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|..++.+++
T Consensus 239 --~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 312 (347)
T 4fmz_A 239 --LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312 (347)
T ss_dssp --GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTT
T ss_pred --hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhcccc
Confidence 4455566666666666653 2 3466677777777777777743 35777888888888888888888888888888
Q ss_pred cccccccCcccccCCCCCccccccccEEeCcceeee
Q 001867 527 LNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLS 562 (1002)
Q Consensus 527 L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~ 562 (1002)
|+.|+|++|.+++..| ++.+++|++|++++|+++
T Consensus 313 L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 313 LTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 8888888888886555 788888888888888875
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=8.4e-34 Score=317.25 Aligned_cols=249 Identities=14% Similarity=0.103 Sum_probs=181.9
Q ss_pred hcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-------
Q 001867 682 LDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR------- 754 (1002)
Q Consensus 682 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------- 754 (1002)
.++|++.+.||+|+||+||+|+. +|+.||||++....... .........+.+.+|+.++++++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~---------~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~ 88 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDL---------VNGSHQKTFEEILPEIIISKELSLLSGEVC 88 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSC---------BTTBCCBCHHHHHHHHHHHHHHHHGGGCSS
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccc---------cccccchhHHHHHHHHHHHHHHHHhhcccc
Confidence 35677789999999999999998 68999999996542110 00012233466888888888875
Q ss_pred --CCceeeeeeEE-----------------ec-------------CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHH
Q 001867 755 --HKNIVKLWCCC-----------------TT-------------RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYK 802 (1002)
Q Consensus 755 --h~niv~l~~~~-----------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~ 802 (1002)
|||||++.+.+ .+ .+..|+||||+++|++.+.+.. +.+++..++.
T Consensus 89 ~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~ 165 (336)
T 2vuw_A 89 NRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKS 165 (336)
T ss_dssp SBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHH
T ss_pred ccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHH
Confidence 66666665554 32 6789999999999977666642 5689999999
Q ss_pred HHHHHHHHHHHHh-hcCCCCeeeCCCCCCcEEECCCC--------------------CeEEccccCcccccCCCCCcccc
Q 001867 803 IIVDAAEGLSYLH-HDCVPSIVHRDVKSNNILLDGDF--------------------GARVADFGVAKVVDASGKPKSMS 861 (1002)
Q Consensus 803 i~~qi~~~L~~LH-~~~~~~iiHrDlk~~NIll~~~~--------------------~~kl~DfGl~~~~~~~~~~~~~~ 861 (1002)
++.||+.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 166 i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------- 235 (336)
T 2vuw_A 166 ILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------- 235 (336)
T ss_dssp HHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------
T ss_pred HHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------
Confidence 9999999999999 88 999999999999999887 8999999999876542
Q ss_pred cccccccccCccccccCCCCCccchhhHHHH-HHHHHhCCCCCCCCCCchhHHHHHHHHhh-ccCccccccccccCCCHH
Q 001867 862 VIAGSCGYIAPEYAYTLRVNEKSDIYSFGVV-ILELVTGRLPVDPEFGEKDLVKWVCSTLD-QKGVDHVLDPKLDCCFKE 939 (1002)
Q Consensus 862 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvi-l~ell~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 939 (1002)
...||+.|||||++.+.. +.++||||+|++ .+++++|..||... ........... ...... .........
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 307 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV----LWLHYLTDKMLKQMTFKT---KCNTPAMKQ 307 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH----HHHHHHHHHHHHTCCCSS---CCCSHHHHH
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch----hhhhHHHHhhhhhhccCc---ccchhhhhh
Confidence 347999999999998766 889999998777 78888899887321 00011111111 101110 011112234
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 001867 940 EICKVLNIGLLCTSPLPINRPAMRRVV 966 (1002)
Q Consensus 940 ~~~~l~~l~~~cl~~dP~~Rps~~evl 966 (1002)
...++.+++.+|++.| |++|++
T Consensus 308 ~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 308 IKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred cCHHHHHHHHHHhccC-----CHHHHH
Confidence 4567889999999865 888877
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=4e-32 Score=303.04 Aligned_cols=287 Identities=22% Similarity=0.263 Sum_probs=177.0
Q ss_pred ccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccC
Q 001867 287 SLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSN 366 (1002)
Q Consensus 287 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 366 (1002)
+++.+++++|.++ .+|..+. ..++.|+|++|.+++..|..|.++++|++|++++|++++..|..|..+++|++|+|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS-PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC-TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cCCEEECCCCCcc-ccCCCCC-CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 5666777777766 4444432 2466677777777666666677777777777777777766666677777777777777
Q ss_pred ccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCcccc--CCCCCcCCCCCcceEEEcccCcccCc
Q 001867 367 NQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLT--GKVPPLLWGLPHVYLLELTDNFLSGE 444 (1002)
Q Consensus 367 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~i~~~ 444 (1002)
|+++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|+++ +..|..+..+ +|+.|++++|++++.
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l 187 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGI 187 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSC
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCcc
Confidence 7776 4444333 56666666666666555555666666666666666664 2555555555 666666666666543
Q ss_pred cccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccc
Q 001867 445 ISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSW 524 (1002)
Q Consensus 445 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 524 (1002)
|..+. ++|+.|++++|++++..|..+..+++|+.|++++|++++..|..+..+++|+.|+|++|+++ .+|..+..+
T Consensus 188 -~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 188 -PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp -CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred -Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 22222 46666666666666555566666666666666666666655556666666666666666666 556666666
Q ss_pred cccccccccCcccccCCCCCcccc------ccccEEeCcceeee--cccCCccccc-ccceEEecccc
Q 001867 525 KKLNELNLADNLFYGNIPEDIGNL------SVLNYLDLSNNRLS--GRIPVGLQNL-KLNQLNVSNNR 583 (1002)
Q Consensus 525 ~~L~~L~Ls~N~l~~~ip~~~~~l------~~L~~L~Ls~N~l~--~~ip~~~~~l-~L~~l~ls~N~ 583 (1002)
++|+.|+|++|.+++..+..++.+ ..|+.|++++|+++ +..|..+..+ .|+.+++++|+
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 666666666666665444445432 45666666666665 4445555555 56666666653
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=6.6e-32 Score=301.06 Aligned_cols=288 Identities=21% Similarity=0.250 Sum_probs=157.7
Q ss_pred ccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccC
Q 001867 287 SLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSN 366 (1002)
Q Consensus 287 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 366 (1002)
+++.++++++.++ .+|..+. ..++.|+|++|++++..+..|.++++|++|++++|++++..|..|..+++|++|+|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP-PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCeEEEecCCCcc-ccCccCC-CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 4555566655555 3333332 1355566666666655555566666666666666666655566666666666666666
Q ss_pred ccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccC--CCCCcCCCCCcceEEEcccCcccCc
Q 001867 367 NQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTG--KVPPLLWGLPHVYLLELTDNFLSGE 444 (1002)
Q Consensus 367 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~i~~~ 444 (1002)
|+++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|+++. ..+..+..+++|+.|++++|.++..
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l 186 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 186 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC
Confidence 6665 3343332 455555555555555555555555566666666655532 4445555555555555555555532
Q ss_pred cccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccc
Q 001867 445 ISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSW 524 (1002)
Q Consensus 445 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 524 (1002)
|..+. ++|+.|++++|++++..|..++.+++|+.|++++|++++..+..+..+++|+.|+|++|+++ .+|..+..+
T Consensus 187 -~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 187 -PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp -CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred -Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 22221 45556666666665555555555666666666666665544455555666666666666665 455555566
Q ss_pred cccccccccCcccccCCCCCccc------cccccEEeCcceeeec--ccCCccccc-ccceEEecccc
Q 001867 525 KKLNELNLADNLFYGNIPEDIGN------LSVLNYLDLSNNRLSG--RIPVGLQNL-KLNQLNVSNNR 583 (1002)
Q Consensus 525 ~~L~~L~Ls~N~l~~~ip~~~~~------l~~L~~L~Ls~N~l~~--~ip~~~~~l-~L~~l~ls~N~ 583 (1002)
++|++|+|++|.+++..+..++. ...|+.|++++|.+.. ..|..+..+ .++.++|++|+
T Consensus 263 ~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 66666666666665444444432 2456666666666542 233444444 56666666653
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1e-31 Score=299.65 Aligned_cols=288 Identities=21% Similarity=0.265 Sum_probs=172.5
Q ss_pred ccchhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeecc
Q 001867 215 NLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDAS 294 (1002)
Q Consensus 215 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 294 (1002)
+++.++++++.++ .+|..+. ++|+.|++++|.+++..+..|.++++|++|++++|++++..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3445555555554 3444432 456666666666665555566666666666666666666666667777777777777
Q ss_pred ccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccC--CCCCCCCCCCCCCceEEccCccccCC
Q 001867 295 MNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLN--GTLPGDLGKNSPLRWVDLSNNQFTGE 372 (1002)
Q Consensus 295 ~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~ 372 (1002)
+|+++ .+|..+. ..|++|++++|++++..+..|..+++|++|++++|+++ +..+..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP-SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SSCCC-SCCSSCC-TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CCcCC-ccCcccc-ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 77766 3443333 34666666666666555555666666666666666664 2555556655 66666666666663
Q ss_pred CChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccC
Q 001867 373 IPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGA 452 (1002)
Q Consensus 373 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 452 (1002)
+|..+. + +|++|++++|++++..+..|..+++|+.|+|++|.+++..+..+..+
T Consensus 187 l~~~~~--~------------------------~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (332)
T 2ft3_A 187 IPKDLP--E------------------------TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL 240 (332)
T ss_dssp CCSSSC--S------------------------SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC
T ss_pred cCcccc--C------------------------CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC
Confidence 333222 3 44444444444444444444445555555555555554444455555
Q ss_pred CcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccc------cccCCeeecCCCcCC--cccccccccc
Q 001867 453 ANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTN------LAELGSLDLHANDLS--GELPSSVSSW 524 (1002)
Q Consensus 453 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l 524 (1002)
++|+.|++++|+++ .+|..++.+++|+.|++++|++++..+..|.. ...|+.|++++|++. +..|..|..+
T Consensus 241 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l 319 (332)
T 2ft3_A 241 PTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCV 319 (332)
T ss_dssp TTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTB
T ss_pred CCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccccc
Confidence 56666666666665 55666666666666666666666554555543 356788888888887 6777888888
Q ss_pred cccccccccCcc
Q 001867 525 KKLNELNLADNL 536 (1002)
Q Consensus 525 ~~L~~L~Ls~N~ 536 (1002)
++|+.|+|++|+
T Consensus 320 ~~L~~l~l~~n~ 331 (332)
T 2ft3_A 320 TDRLAIQFGNYK 331 (332)
T ss_dssp CCSTTEEC----
T ss_pred chhhhhhccccc
Confidence 888888888875
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.6e-31 Score=295.09 Aligned_cols=267 Identities=21% Similarity=0.222 Sum_probs=198.4
Q ss_pred ccceeeccccccCCCCCccCCCCC-cceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEcc
Q 001867 287 SLRLLDASMNDLTGPIPDDLTRLP-LESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLS 365 (1002)
Q Consensus 287 ~L~~L~Ls~N~l~~~~p~~~~~~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 365 (1002)
+|+.|++++|++++..+..+..++ |++|+|++|++++..|..|..+++|++|++++|+++. +|..+. ++|++|+++
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRVH 129 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEECC
Confidence 344444444444443333343332 4444444455544555556666666666666666663 333333 578888888
Q ss_pred CccccCCCChhhhccCcccceeeecccccc--CCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccC
Q 001867 366 NNQFTGEIPASLCEKGELEELLMIYNSFTG--QLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSG 443 (1002)
Q Consensus 366 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 443 (1002)
+|++++..+..+..+++|++|++++|.++. ..+..+.++++|++|++++|++++ +|..+. ++|+.|++++|.+++
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~ 206 (330)
T 1xku_A 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITK 206 (330)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCE
T ss_pred CCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCc
Confidence 888887777778888888888888888853 677888888999999999999885 454443 788999999999988
Q ss_pred ccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCccccccccc
Q 001867 444 EISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSS 523 (1002)
Q Consensus 444 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 523 (1002)
..+..+..+++|+.|++++|++++..+..++.+++|+.|++++|+++ .+|..+..+++|++|+|++|++++..+..|..
T Consensus 207 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~ 285 (330)
T 1xku_A 207 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP 285 (330)
T ss_dssp ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSC
T ss_pred cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCC
Confidence 88888999999999999999998777778889999999999999998 78888999999999999999999887777754
Q ss_pred ------ccccccccccCccccc--CCCCCccccccccEEeCccee
Q 001867 524 ------WKKLNELNLADNLFYG--NIPEDIGNLSVLNYLDLSNNR 560 (1002)
Q Consensus 524 ------l~~L~~L~Ls~N~l~~--~ip~~~~~l~~L~~L~Ls~N~ 560 (1002)
...|+.|++++|.+.. ..|..+..+.+|+.++|++|+
T Consensus 286 ~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 286 PGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3778899999998863 456788889999999999985
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.9e-35 Score=344.61 Aligned_cols=379 Identities=23% Similarity=0.195 Sum_probs=237.6
Q ss_pred cccccccccCCCCCCCCCCcccCCCCccchhhccCccccc----ccccccccccccchhcccCcccccccCcccc-ccc-
Q 001867 189 STLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVG----EIPDSLGRLAKLVDLDLALNNLVGAIPSSLT-ELA- 262 (1002)
Q Consensus 189 ~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~-~l~- 262 (1002)
++|++|+|++|++........+..+++|++|++++|+++. .++..+..+++|++|+|++|.+....+..+. .+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 5678888888876332223336677788888888888774 3456666777888888888877654443332 244
Q ss_pred ---ceeeeeccCCcccC----CCCCccccccccceeeccccccCCCCCccCCC------CCcceeecCCCcccCcCCccc
Q 001867 263 ---SVVQIELYNNSLTG----DLPTGWSNLTSLRLLDASMNDLTGPIPDDLTR------LPLESLNLYENRLEGSLPATI 329 (1002)
Q Consensus 263 ---~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------~~L~~L~L~~N~l~~~~p~~~ 329 (1002)
+|++|++++|+++. .++..+..+++|++|++++|++++..+..+.. .+|+.|+|++|++++..+..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~- 161 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP- 161 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH-
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH-
Confidence 57777777777763 34666777777777777777765432222111 12555555555555322111
Q ss_pred CCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhc-----cCcccceeeeccccccC----CCCc
Q 001867 330 ADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCE-----KGELEELLMIYNSFTGQ----LPDG 400 (1002)
Q Consensus 330 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~----~p~~ 400 (1002)
++..+..+++|++|++++|++++..+..++. .++|++|++++|.+++. ++..
T Consensus 162 -------------------l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 162 -------------------LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp -------------------HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred -------------------HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 1222334455666666666655443333332 34566666666666543 3455
Q ss_pred CcCCCCCcEEEccCccccCCC-----CCcCCCCCcceEEEcccCcccCc----cccccccCCcccEEEccCCcCCCCCcc
Q 001867 401 LGHCQSLTRVRLGYNRLTGKV-----PPLLWGLPHVYLLELTDNFLSGE----ISKNIAGAANLSLLIISKNNLSGSLPE 471 (1002)
Q Consensus 401 l~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 471 (1002)
+..+++|++|++++|++++.. +..+..+++|+.|++++|.++.. ++..+..+++|+.|++++|.+.+..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 556677777777777765422 23334567777777777777654 455566677788888888877655444
Q ss_pred ccccc-----cccccccccccccCCC----CcccccccccCCeeecCCCcCCccccccccc-----ccccccccccCccc
Q 001867 472 EIGFL-----KSLVVLSGSENKFTGS----LPESLTNLAELGSLDLHANDLSGELPSSVSS-----WKKLNELNLADNLF 537 (1002)
Q Consensus 472 ~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 537 (1002)
.+... ++|+.|++++|.+++. +|..+..+++|+.|||++|++++..+..+.. .++|+.|+|++|.+
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 44432 5788888888887754 4556667788888888888887766655543 56888888888888
Q ss_pred cc----CCCCCccccccccEEeCcceeeecccCCccc-----cc-ccceEEeccccCcCC
Q 001867 538 YG----NIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQ-----NL-KLNQLNVSNNRLSGE 587 (1002)
Q Consensus 538 ~~----~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~-----~l-~L~~l~ls~N~l~g~ 587 (1002)
++ .+|..+..+++|++|||++|++++.-...+. .. +|+.|++.+|.+...
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~ 442 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEE 442 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHH
Confidence 75 6777788888888888888888764222211 11 477777777766543
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-35 Score=347.46 Aligned_cols=387 Identities=19% Similarity=0.146 Sum_probs=271.2
Q ss_pred ccccceeeeccccccCcccc-ccccccccccccccCCCCCCC---CCCcccCCCCccchhhccCcccccccccccc-ccc
Q 001867 164 FQKLEVISLVYNLLDGTIPA-FLGNISTLKMLNLSYNPFLPG---RIPPELGNLTNLEILWLTECNLVGEIPDSLG-RLA 238 (1002)
Q Consensus 164 l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~~~~~---~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~ 238 (1002)
+++|++|+|++|+++..... .+..+++|++|+|++|.+... .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 36899999999999865443 388899999999999997321 3466788899999999999999875555443 355
Q ss_pred ----ccchhcccCccccc----ccCcccccccceeeeeccCCcccCCCCCccc-----cccccceeeccccccCCCC---
Q 001867 239 ----KLVDLDLALNNLVG----AIPSSLTELASVVQIELYNNSLTGDLPTGWS-----NLTSLRLLDASMNDLTGPI--- 302 (1002)
Q Consensus 239 ----~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~--- 302 (1002)
+|++|+|++|+++. .++..+..+++|++|++++|.+++..+..+. ..++|++|++++|++++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 69999999999984 5688899999999999999999865444433 2568999999999998643
Q ss_pred -CccCCCC-CcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCC-CCCCCCceEEccCccccCC----CCh
Q 001867 303 -PDDLTRL-PLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDL-GKNSPLRWVDLSNNQFTGE----IPA 375 (1002)
Q Consensus 303 -p~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~----~p~ 375 (1002)
+..+... .|+.|+|++|.+....+..+.. .+ ...++|++|+|++|++++. ++.
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~--------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQ--------------------GLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHH--------------------HHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHH--------------------HHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 2222222 3777777777766443333321 00 0123455566666655543 344
Q ss_pred hhhccCcccceeeeccccccCC-----CCcCcCCCCCcEEEccCccccCC----CCCcCCCCCcceEEEcccCcccCccc
Q 001867 376 SLCEKGELEELLMIYNSFTGQL-----PDGLGHCQSLTRVRLGYNRLTGK----VPPLLWGLPHVYLLELTDNFLSGEIS 446 (1002)
Q Consensus 376 ~~~~l~~L~~L~l~~N~l~~~~-----p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~i~~~~~ 446 (1002)
.+..+++|++|++++|.+++.. +..+..+++|++|++++|++++. ++..+..+++|+.|++++|.+.+..+
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 301 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHH
Confidence 5555566666666666655322 22223467788888888877753 45556667788888888888765544
Q ss_pred ccccc-----CCcccEEEccCCcCCCC----CccccccccccccccccccccCCCCcccccc-----cccCCeeecCCCc
Q 001867 447 KNIAG-----AANLSLLIISKNNLSGS----LPEEIGFLKSLVVLSGSENKFTGSLPESLTN-----LAELGSLDLHAND 512 (1002)
Q Consensus 447 ~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~ 512 (1002)
..+.. .++|+.|++++|.+++. ++..+..+++|+.|++++|++++..+..+.. .++|+.|+|++|.
T Consensus 302 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 44433 26888888888888865 4566777889999999999888655555543 5789999999999
Q ss_pred CCc----ccccccccccccccccccCcccccCCCCCcc-----ccccccEEeCcceeeecccCCccc
Q 001867 513 LSG----ELPSSVSSWKKLNELNLADNLFYGNIPEDIG-----NLSVLNYLDLSNNRLSGRIPVGLQ 570 (1002)
Q Consensus 513 l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~-----~l~~L~~L~Ls~N~l~~~ip~~~~ 570 (1002)
+++ .+|..+..+++|++|+|++|.+++.-...+. ...+|+.|++.+|......+..+.
T Consensus 382 i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~l~ 448 (461)
T 1z7x_W 382 VSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 448 (461)
T ss_dssp CCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHHH
T ss_pred CChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHHHH
Confidence 986 7888888899999999999998854211111 234577777777776655554443
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.8e-31 Score=296.26 Aligned_cols=284 Identities=22% Similarity=0.283 Sum_probs=196.1
Q ss_pred CCCCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCC
Q 001867 54 DSPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTL 133 (1002)
Q Consensus 54 ~~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 133 (1002)
.++|.|.|+ |+ +++++++. +|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|++++..
T Consensus 27 ~~~C~~~~~-c~----------~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 27 SLSCDRNGI-CK----------GSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp CCEECTTSE-EE----------CCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCCCeE-ee----------CCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 567999887 75 45677774 455444 48899999999998777778888888888888888888777
Q ss_pred CccccccCCccccccccccccCCCCcccccccccceeeeccccccCccc-cccccccccccccccCCCCCCCCCCcccCC
Q 001867 134 TPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIP-AFLGNISTLKMLNLSYNPFLPGRIPPELGN 212 (1002)
Q Consensus 134 ~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~ 212 (1002)
+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..++++++|++|++++|.......+..+++
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 172 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccC
Confidence 7788888888888888888886555557888888888888888875444 467777777777777774333333456666
Q ss_pred CCccchhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCcccc---ccccc
Q 001867 213 LTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSN---LTSLR 289 (1002)
Q Consensus 213 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~---l~~L~ 289 (1002)
+++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|.+++..+..+.. .+.
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~-- 250 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSL-- 250 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCC--
T ss_pred CCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccch--
Confidence 666777777776666666666666666666666666665433333344555666666655555443332211 122
Q ss_pred eeeccccccCCCCCccCCCCCcceeecCCCcccC----cCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEcc
Q 001867 290 LLDASMNDLTGPIPDDLTRLPLESLNLYENRLEG----SLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLS 365 (1002)
Q Consensus 290 ~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 365 (1002)
++.++|+++.+.+ .+|..+..+++|++|++++|+++.+.+..|..+++|++|+|+
T Consensus 251 ---------------------l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 309 (353)
T 2z80_A 251 ---------------------IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLH 309 (353)
T ss_dssp ---------------------CCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred ---------------------hhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEee
Confidence 4445555555443 456778888888889999998885544446888889999999
Q ss_pred CccccCCCC
Q 001867 366 NNQFTGEIP 374 (1002)
Q Consensus 366 ~N~l~~~~p 374 (1002)
+|++++..|
T Consensus 310 ~N~~~~~~~ 318 (353)
T 2z80_A 310 TNPWDCSCP 318 (353)
T ss_dssp SSCBCCCHH
T ss_pred CCCccCcCC
Confidence 998886544
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.8e-33 Score=338.71 Aligned_cols=409 Identities=14% Similarity=0.072 Sum_probs=208.4
Q ss_pred CCCCccccCcccccccccccc---cCCCCcccc------------ccCCccccccccccccCCCCcccccc--cccceee
Q 001867 109 LPDDISACQNLQHLDLSQNLL---TGTLTPALA------------DLPNLKFLDLTGNNFSGDIPESFGRF--QKLEVIS 171 (1002)
Q Consensus 109 ~p~~~~~l~~L~~L~Ls~N~l---~~~~~~~~~------------~L~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~ 171 (1002)
.+..+..+++|++|+|+++.- .+.+|..++ .+++|++|+|++|.+++..+..+... .+|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 444566788888888877532 123343333 45556666666555554444444432 2255555
Q ss_pred ecccc-ccC-ccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccc----cccccccccccchhcc
Q 001867 172 LVYNL-LDG-TIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGE----IPDSLGRLAKLVDLDL 245 (1002)
Q Consensus 172 L~~N~-l~~-~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L 245 (1002)
|++|. ++. .++....++++|++|+|+ +|.+++. ++..+..+++|++|++
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~-------------------------~~~~~~~~~~~l~~~~~~~~~L~~L~L 199 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLME-------------------------ESSFSEKDGKWLHELAQHNTSLEVLNF 199 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECT-------------------------TCEEECCCSHHHHHHHHHCCCCCEEEC
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECc-------------------------cccccCcchhHHHHHHhcCCCccEEEe
Confidence 55544 110 111222234444444444 4444333 2223345556666666
Q ss_pred cCcccc----cccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcc
Q 001867 246 ALNNLV----GAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRL 321 (1002)
Q Consensus 246 ~~N~l~----~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l 321 (1002)
++|.++ +.++..+.++++|+.|++++|.+.+ ++..+..+++|+.|+++.+......+
T Consensus 200 ~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~------------------ 260 (592)
T 3ogk_B 200 YMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMP------------------ 260 (592)
T ss_dssp TTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCT------------------
T ss_pred eccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchH------------------
Confidence 666665 2233344456666666666666664 44556666777777766432210000
Q ss_pred cCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCC-hhhhccCcccceeeeccccccCCCCc
Q 001867 322 EGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIP-ASLCEKGELEELLMIYNSFTGQLPDG 400 (1002)
Q Consensus 322 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~ 400 (1002)
..+..+..+++|+.|.++++.. +.+|..+..+++|++|+|++|.+++... ..+..+++|++|+++++...+.++..
T Consensus 261 --~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~ 337 (592)
T 3ogk_B 261 --EKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVL 337 (592)
T ss_dssp --TSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHH
T ss_pred --HHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHH
Confidence 1112222333334444333211 1233334444455555555555443222 22344555555555522222222223
Q ss_pred CcCCCCCcEEEcc-----------CccccCCC-CCcCCCCCcceEEEcccCcccCcccccccc-CCcccEEEcc----CC
Q 001867 401 LGHCQSLTRVRLG-----------YNRLTGKV-PPLLWGLPHVYLLELTDNFLSGEISKNIAG-AANLSLLIIS----KN 463 (1002)
Q Consensus 401 l~~l~~L~~L~L~-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~-l~~L~~L~Ls----~N 463 (1002)
+..+++|++|+|+ .|.+++.. +..+..+++|+.|+++.|.+++.....+.. +++|+.|+++ .|
T Consensus 338 ~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n 417 (592)
T 3ogk_B 338 AQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREE 417 (592)
T ss_dssp HHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCS
T ss_pred HHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCc
Confidence 3445566666666 24443221 112234566666666666666555555544 6667777764 55
Q ss_pred cCCCC-----Ccccccccccccccccccc--ccCCCCcccccc-cccCCeeecCCCcCCc-ccccccccccccccccccC
Q 001867 464 NLSGS-----LPEEIGFLKSLVVLSGSEN--KFTGSLPESLTN-LAELGSLDLHANDLSG-ELPSSVSSWKKLNELNLAD 534 (1002)
Q Consensus 464 ~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~ 534 (1002)
++++. ++..+..+++|+.|+++.| .+++..+..+.. +++|+.|+|++|++++ .++..+..+++|+.|+|++
T Consensus 418 ~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~ 497 (592)
T 3ogk_B 418 RITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRG 497 (592)
T ss_dssp CCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEES
T ss_pred cccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccC
Confidence 66543 2333555677777777533 355444444433 6677777777777765 3344556677777777777
Q ss_pred cccccC-CCCCccccccccEEeCcceeeecc
Q 001867 535 NLFYGN-IPEDIGNLSVLNYLDLSNNRLSGR 564 (1002)
Q Consensus 535 N~l~~~-ip~~~~~l~~L~~L~Ls~N~l~~~ 564 (1002)
|.+++. ++..+..+++|++|+|++|++++.
T Consensus 498 n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 498 CCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 776644 333345677777777777777654
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=7.5e-30 Score=287.19 Aligned_cols=282 Identities=20% Similarity=0.220 Sum_probs=175.8
Q ss_pred cccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEE
Q 001867 284 NLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVD 363 (1002)
Q Consensus 284 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 363 (1002)
.++.....++++|.++ .+|..+.. .|++|++++|++++..+..+.++++|++|++++|++++..|..|..+++|++|+
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLTE-AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCeEeeCCCCCcc-cccccccc-cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 3445555677777777 45554433 577788888887766666777888888888888888877777788888888888
Q ss_pred ccCccccCCCChhhhccCcccceeeeccccccCCC-CcCcCCCCCcEEEccCc-cccCCCCCcCCCCCcceEEEcccCcc
Q 001867 364 LSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLP-DGLGHCQSLTRVRLGYN-RLTGKVPPLLWGLPHVYLLELTDNFL 441 (1002)
Q Consensus 364 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~i 441 (1002)
|++|++++..+..+..+++|++|++++|.+++..+ ..+.++++|++|++++| .+++..+..|.++++|+.|++++|.+
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 88888875555557777777777777777764433 36667777777777776 35555556666666666666666666
Q ss_pred cCccccccccCCcccEEEccCCcCCCCCcc-ccccccccccccccccccCCCCccccc---ccccCCeeecCCCcCCccc
Q 001867 442 SGEISKNIAGAANLSLLIISKNNLSGSLPE-EIGFLKSLVVLSGSENKFTGSLPESLT---NLAELGSLDLHANDLSGEL 517 (1002)
Q Consensus 442 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~ 517 (1002)
.+..+..+..+++|+.|++++|++. .+|. .+..+++|+.|++++|++++..+..+. ....++.++|++|.+++
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~-- 263 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITD-- 263 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCH--
T ss_pred CccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccC--
Confidence 6666666666666666666666665 3333 233456666666666666544333222 12333344444433332
Q ss_pred ccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCc-cccc-ccceEEeccccCcCCCC
Q 001867 518 PSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVG-LQNL-KLNQLNVSNNRLSGELP 589 (1002)
Q Consensus 518 p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~-~~~l-~L~~l~ls~N~l~g~~p 589 (1002)
|.+. .+|+.++++++|++|||++|+++ .+|.. ++.+ +|+.|+|++|++++..|
T Consensus 264 -----------------~~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 264 -----------------ESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -----------------HHHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -----------------cchh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 2222 35556666666666666666666 34444 3555 56666666666666655
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.6e-29 Score=278.54 Aligned_cols=231 Identities=17% Similarity=0.234 Sum_probs=161.5
Q ss_pred cccchhcccccccCCCCCCCCCCCCCCceEEccCccccCC--CChhhhccCcccceeeeccccccCCCCcCcCCCCCcEE
Q 001867 333 PGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGE--IPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRV 410 (1002)
Q Consensus 333 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 410 (1002)
++|++|++++|+++...+..|..+++|++|+|++|+++.. .+..+..+++|++|++++|.+++ +|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEE
Confidence 4566666666666655555567777777777777777632 25666667777777777777763 45557777777777
Q ss_pred EccCccccCCCC-CcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCC-CCccccccccccccccccccc
Q 001867 411 RLGYNRLTGKVP-PLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSG-SLPEEIGFLKSLVVLSGSENK 488 (1002)
Q Consensus 411 ~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 488 (1002)
++++|++++..+ ..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+++ .+|..++.+++|+.|++++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 777777776554 466777777777777777776666667777777777777777765 466677777777777777777
Q ss_pred cCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccc-cccEEeCcceeeecc
Q 001867 489 FTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLS-VLNYLDLSNNRLSGR 564 (1002)
Q Consensus 489 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~-~L~~L~Ls~N~l~~~ 564 (1002)
+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++.+|..+..++ +|++|+|++|++++.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 7766666777777777777777777766666677777777777777777777777777763 677777777777654
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=8.1e-30 Score=280.94 Aligned_cols=283 Identities=19% Similarity=0.181 Sum_probs=208.0
Q ss_pred eeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCC--CCCCCCCCCCCceEEccCc
Q 001867 290 LLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGT--LPGDLGKNSPLRWVDLSNN 367 (1002)
Q Consensus 290 ~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N 367 (1002)
.++.+++.++ .+|..+. ..++.|+|++|+++...+..|..+++|++|++++|+++.. .+..+..+++|++|+|++|
T Consensus 11 ~l~c~~~~l~-~ip~~~~-~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n 88 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP-SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88 (306)
T ss_dssp EEECCSSCCS-SCCSCCC-TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSC
T ss_pred EEEcCCCCcc-cCCCCCC-CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCC
Confidence 3444444444 2333222 1355555555555544444456666666666666666522 2344555677777777777
Q ss_pred cccCCCChhhhccCcccceeeeccccccCCC-CcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccC-cc
Q 001867 368 QFTGEIPASLCEKGELEELLMIYNSFTGQLP-DGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSG-EI 445 (1002)
Q Consensus 368 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~-~~ 445 (1002)
+++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|++++..|..|..+++|+.|++++|.+.+ ..
T Consensus 89 ~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 167 (306)
T 2z66_A 89 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 167 (306)
T ss_dssp SEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEE
T ss_pred ccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccc
Confidence 777 456667777778888888887776555 577888888888888888888888888888888888888888876 57
Q ss_pred ccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCccccccccccc
Q 001867 446 SKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWK 525 (1002)
Q Consensus 446 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 525 (1002)
|..+..+++|+.|++++|++++..|..++.+++|+.|++++|++++..+..+..+++|+.|||++|++++..|..+..++
T Consensus 168 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 247 (306)
T 2z66_A 168 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP 247 (306)
T ss_dssp CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCC
T ss_pred hhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhh
Confidence 78888888999999999999877788888899999999999999877777888899999999999999998898888884
Q ss_pred -ccccccccCcccccCCCC--CccccccccEEeCcceeeecccCCcccccccc
Q 001867 526 -KLNELNLADNLFYGNIPE--DIGNLSVLNYLDLSNNRLSGRIPVGLQNLKLN 575 (1002)
Q Consensus 526 -~L~~L~Ls~N~l~~~ip~--~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~L~ 575 (1002)
+|++|+|++|.+++.-+. ....+...+.+.+..|.+....|..++...+.
T Consensus 248 ~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~~~ 300 (306)
T 2z66_A 248 SSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVL 300 (306)
T ss_dssp TTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTCBGG
T ss_pred ccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCceee
Confidence 899999999999865321 12345556666777888888888777665443
No 305
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=6.2e-29 Score=275.83 Aligned_cols=233 Identities=23% Similarity=0.279 Sum_probs=163.0
Q ss_pred cccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEc
Q 001867 333 PGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRL 412 (1002)
Q Consensus 333 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L 412 (1002)
+++++|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|.++ .+|..++++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45566666666665 44555555666666666666666 55555555566666666666555 45555555555666666
Q ss_pred cCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCC
Q 001867 413 GYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGS 492 (1002)
Q Consensus 413 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 492 (1002)
++|++.+.+|..+... ..+..+.++++|+.|++++|+++ .+|..++.+++|+.|++++|++++
T Consensus 158 ~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~- 220 (328)
T 4fcg_A 158 RACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA- 220 (328)
T ss_dssp EEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-
T ss_pred CCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-
Confidence 5555555555544320 01122345778888888888887 777778888888888888888884
Q ss_pred CcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc
Q 001867 493 LPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL 572 (1002)
Q Consensus 493 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l 572 (1002)
+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|.+.+.+|..++++++|++|+|++|++.|.+|..+..+
T Consensus 221 l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L 300 (328)
T 4fcg_A 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300 (328)
T ss_dssp CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGS
T ss_pred CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhc
Confidence 66678888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred -ccceEEeccccCc
Q 001867 573 -KLNQLNVSNNRLS 585 (1002)
Q Consensus 573 -~L~~l~ls~N~l~ 585 (1002)
+++.+++..|.+.
T Consensus 301 ~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 301 PANCIILVPPHLQA 314 (328)
T ss_dssp CTTCEEECCGGGSC
T ss_pred cCceEEeCCHHHHH
Confidence 6888888777665
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.8e-30 Score=283.99 Aligned_cols=249 Identities=22% Similarity=0.217 Sum_probs=195.1
Q ss_pred cCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccc-cCCCChhhh-------ccCcccceeeeccccccCCCCc
Q 001867 329 IADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQF-TGEIPASLC-------EKGELEELLMIYNSFTGQLPDG 400 (1002)
Q Consensus 329 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~p~~ 400 (1002)
++..++|++|++++|.+ .+|..+... |+.|+|++|++ ...+|..+. .+++|++|++++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45556777777777777 455544433 77788888887 345666555 6788888888888888888877
Q ss_pred C--cCCCCCcEEEccCccccCCCCCcCCCC-----CcceEEEcccCcccCccccccccCCcccEEEccCCcCCCC--Ccc
Q 001867 401 L--GHCQSLTRVRLGYNRLTGKVPPLLWGL-----PHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGS--LPE 471 (1002)
Q Consensus 401 l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~ 471 (1002)
+ +.+++|++|+|++|++++. |..+..+ ++|++|+|++|++.+..+..|..+++|+.|++++|++.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 7888888888888888876 7777766 8888888888888888888888888888888888887765 344
Q ss_pred cc--ccccccccccccccccCC--CCc-ccccccccCCeeecCCCcCCcccc-cccccccccccccccCcccccCCCCCc
Q 001867 472 EI--GFLKSLVVLSGSENKFTG--SLP-ESLTNLAELGSLDLHANDLSGELP-SSVSSWKKLNELNLADNLFYGNIPEDI 545 (1002)
Q Consensus 472 ~~--~~l~~L~~L~Ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ip~~~ 545 (1002)
.+ +.+++|+.|++++|++++ .++ ..+..+++|+.|||++|++++.+| ..+..+++|+.|+|++|.|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 788899999999998883 122 334577899999999999998775 55677889999999999998 788887
Q ss_pred cccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCC
Q 001867 546 GNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGE 587 (1002)
Q Consensus 546 ~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~ 587 (1002)
. ++|++|||++|+|++. |. +..+ +|+.|+|++|++++.
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 7 8899999999999875 66 7777 799999999998864
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.8e-28 Score=265.58 Aligned_cols=257 Identities=22% Similarity=0.218 Sum_probs=134.7
Q ss_pred ceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCcc
Q 001867 289 RLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQ 368 (1002)
Q Consensus 289 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 368 (1002)
+.++.+++.++ .+|..+. ..++.|+|++|++++..+..|..+++|++|++++|++++..|..|..+++|++|+|++|+
T Consensus 14 ~~~~c~~~~l~-~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGIP-AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp CEEECCSSCCS-SCCTTCC-TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred eEEEcCcCCcc-cCCcCCC-CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 34555555555 2333221 135555555555554444445555555555555555555445555555555555555554
Q ss_pred -ccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCcccc
Q 001867 369 -FTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISK 447 (1002)
Q Consensus 369 -l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~ 447 (1002)
++...| ..+..+++|++|++++|++++..|..|..+++|+.|++++|.+++..+.
T Consensus 92 ~l~~~~~------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 147 (285)
T 1ozn_A 92 QLRSVDP------------------------ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 147 (285)
T ss_dssp TCCCCCT------------------------TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CccccCH------------------------HHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh
Confidence 443334 4444444555555555555544444444555555555555555544444
Q ss_pred ccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCccccccccccccc
Q 001867 448 NIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKL 527 (1002)
Q Consensus 448 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 527 (1002)
.+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++..|..+..+++|
T Consensus 148 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 45555555555555555554444445555566666666666655555566666666666666666665555556666666
Q ss_pred ccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc
Q 001867 528 NELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL 572 (1002)
Q Consensus 528 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l 572 (1002)
+.|+|++|.++...+.. .-...++.+..+.|.+....|..+...
T Consensus 228 ~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~g~ 271 (285)
T 1ozn_A 228 QYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLAGR 271 (285)
T ss_dssp CEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGTTC
T ss_pred CEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhCCc
Confidence 66666666665433221 112334445566666666666665543
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.5e-28 Score=267.66 Aligned_cols=251 Identities=20% Similarity=0.179 Sum_probs=215.9
Q ss_pred hhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCcc
Q 001867 337 ELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNR 416 (1002)
Q Consensus 337 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 416 (1002)
+++.+++.++. +|..+ .++|++|+|++|++++..+..|..+++|++|++++|.+++..|..|.++++|++|++++|+
T Consensus 15 ~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 15 TTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp EEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 44555555553 33332 3578888888888887777778888888888888888888888899999999999999997
Q ss_pred -ccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcc
Q 001867 417 -LTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPE 495 (1002)
Q Consensus 417 -l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 495 (1002)
+++..|..|..+++|+.|++++|.+++..+..+..+++|+.|++++|++++..+..++.+++|+.|++++|++++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 8877799999999999999999999999999999999999999999999977777899999999999999999976667
Q ss_pred cccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-cc
Q 001867 496 SLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KL 574 (1002)
Q Consensus 496 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L 574 (1002)
.|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..|..+..+++|++|+|++|+++...+.. ... .+
T Consensus 172 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l 250 (285)
T 1ozn_A 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWL 250 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHH
T ss_pred HhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHH
Confidence 7999999999999999999999999999999999999999999776677999999999999999999755532 111 46
Q ss_pred ceEEeccccCcCCCChh
Q 001867 575 NQLNVSNNRLSGELPSL 591 (1002)
Q Consensus 575 ~~l~ls~N~l~g~~p~~ 591 (1002)
+.++.+.|.+.+..|..
T Consensus 251 ~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 251 QKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHCCSEECCCBEEESGG
T ss_pred HhcccccCccccCCchH
Confidence 66778889998888865
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=4.8e-28 Score=281.93 Aligned_cols=226 Identities=21% Similarity=0.165 Sum_probs=125.3
Q ss_pred cchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccC
Q 001867 335 LYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGY 414 (1002)
Q Consensus 335 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~ 414 (1002)
+++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|++|++++|.+++..+..|.++++|++|+|++
T Consensus 77 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 156 (452)
T 3zyi_A 77 TRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRN 156 (452)
T ss_dssp CSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCS
T ss_pred ccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCC
Confidence 34444444444444444444444444444444444444444444444444444444444444444455555555555555
Q ss_pred ccccCCCCCcCCCCCcceEEEccc-CcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCC
Q 001867 415 NRLTGKVPPLLWGLPHVYLLELTD-NFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSL 493 (1002)
Q Consensus 415 N~l~~~~p~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 493 (1002)
|++++..+..|..+++|+.|++++ |.+..+.+..|.++++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..
T Consensus 157 N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~ 234 (452)
T 3zyi_A 157 NPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIR 234 (452)
T ss_dssp CCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEEC
T ss_pred CCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccC
Confidence 555544444555555555555555 33333333445556666666666666653 33 3555666666666666666555
Q ss_pred cccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeee
Q 001867 494 PESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLS 562 (1002)
Q Consensus 494 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~ 562 (1002)
|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|.+.
T Consensus 235 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 666666666666666666666666666666666666666666666544555566666666666666655
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.5e-29 Score=277.41 Aligned_cols=251 Identities=22% Similarity=0.230 Sum_probs=158.5
Q ss_pred cccccccceeeccccccCCCCCccCCCCCcceeecCCCccc-CcCCcccC-------CCcccchhcccccccCCCCCCCC
Q 001867 282 WSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLE-GSLPATIA-------DSPGLYELRLFRNRLNGTLPGDL 353 (1002)
Q Consensus 282 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~ 353 (1002)
++..++|+.|++++|.+ .+|..+... ++.|+|++|++. ..+|..+. ++++|++|++++|++++.+|..+
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 44556666666666666 444433332 666666666663 34454444 57778888888888877777765
Q ss_pred --CCCCCCceEEccCccccCCCChhhhcc-----CcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCC
Q 001867 354 --GKNSPLRWVDLSNNQFTGEIPASLCEK-----GELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLW 426 (1002)
Q Consensus 354 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 426 (1002)
..+++|++|+|++|++++. |..+..+ ++|++|++++|.+++..|..|+++++|++|+|++|++.+..+
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---- 190 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG---- 190 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHH----
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchH----
Confidence 7778888888888888766 6666655 555555555555555555555555555555555555433210
Q ss_pred CCCcceEEEcccCcccCcccccc--ccCCcccEEEccCCcCCC--CCc-cccccccccccccccccccCCCCc-cccccc
Q 001867 427 GLPHVYLLELTDNFLSGEISKNI--AGAANLSLLIISKNNLSG--SLP-EEIGFLKSLVVLSGSENKFTGSLP-ESLTNL 500 (1002)
Q Consensus 427 ~l~~L~~L~L~~N~i~~~~~~~~--~~l~~L~~L~Ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l 500 (1002)
.+..+ ..+++|+.|+|++|++++ .++ ..+..+++|+.|++++|++++..| ..+..+
T Consensus 191 ------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 191 ------------------LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp ------------------HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred ------------------HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 11222 455666666666666652 111 223456677777777777776554 445567
Q ss_pred ccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeec
Q 001867 501 AELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 501 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 77888888888877 6666665 7788888888888754 55 7788888888888888775
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.3e-28 Score=280.59 Aligned_cols=227 Identities=20% Similarity=0.166 Sum_probs=134.4
Q ss_pred ccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEcc
Q 001867 334 GLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLG 413 (1002)
Q Consensus 334 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~ 413 (1002)
+++.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|.++++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 44445555555555555555555566666666666655555555555555555555555555555556666666666666
Q ss_pred CccccCCCCCcCCCCCcceEEEccc-CcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCC
Q 001867 414 YNRLTGKVPPLLWGLPHVYLLELTD-NFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGS 492 (1002)
Q Consensus 414 ~N~l~~~~p~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 492 (1002)
+|++++..+..|..+++|+.|+|++ |.+..+.+..|.++++|+.|+|++|+++ .+| .+..+++|+.|+|++|++++.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCcc
Confidence 6666655555666666666666665 3333333445566666666666666665 334 355566666666666666655
Q ss_pred CcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeee
Q 001867 493 LPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLS 562 (1002)
Q Consensus 493 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~ 562 (1002)
.|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 5666666666666666666666666666666666666666666666544455566666666666666654
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=4.9e-28 Score=281.88 Aligned_cols=249 Identities=20% Similarity=0.137 Sum_probs=222.3
Q ss_pred chhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCc
Q 001867 336 YELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYN 415 (1002)
Q Consensus 336 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N 415 (1002)
..++.+++.++ .+|..+. +++++|+|++|+|++..|..|..+++|++|++++|.+++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 34555555665 3444443 68999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCC-cCCCCCccccccccccccccccccccCCCCc
Q 001867 416 RLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKN-NLSGSLPEEIGFLKSLVVLSGSENKFTGSLP 494 (1002)
Q Consensus 416 ~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 494 (1002)
++++..+..|..+++|+.|+|++|.|..+.+..|..+++|+.|++++| .+....+..+..+++|+.|+|++|++++ +|
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc
Confidence 999888888999999999999999999888889999999999999995 5553344478999999999999999995 45
Q ss_pred ccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-c
Q 001867 495 ESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-K 573 (1002)
Q Consensus 495 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~ 573 (1002)
.+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+..+ +
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred -cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 58899999999999999999999999999999999999999998889999999999999999999998777778888 7
Q ss_pred cceEEeccccCcCCCC
Q 001867 574 LNQLNVSNNRLSGELP 589 (1002)
Q Consensus 574 L~~l~ls~N~l~g~~p 589 (1002)
|+.|+|++|++.-...
T Consensus 292 L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 292 LVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCEEECCSSCEECSTT
T ss_pred CCEEEccCCCcCCCCC
Confidence 9999999999875433
No 313
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1e-31 Score=324.97 Aligned_cols=429 Identities=16% Similarity=0.128 Sum_probs=223.0
Q ss_pred CCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCC---CCCCCCCcc------------ccCccc
Q 001867 56 PCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSI---NSTLPDDIS------------ACQNLQ 120 (1002)
Q Consensus 56 ~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~L~ 120 (1002)
|++|.++.+... + .+.+.+ .....++..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~~--~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSETR--E--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHHC--C--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhccc--c--EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 448999954321 1 222322 23334455678899999999988532 244554444 789999
Q ss_pred ccccccccccCCCCcccccc--CCcccccccccc-ccC-CCCcccccccccceeeeccccccCc----cccccccccccc
Q 001867 121 HLDLSQNLLTGTLTPALADL--PNLKFLDLTGNN-FSG-DIPESFGRFQKLEVISLVYNLLDGT----IPAFLGNISTLK 192 (1002)
Q Consensus 121 ~L~Ls~N~l~~~~~~~~~~L--~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~ 192 (1002)
+|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999999987666667664 459999999987 321 1233345789999999999998766 445567788999
Q ss_pred cccccCCCCCC---CCCCcccCCCCccchhhccCcccccccccccccccccchhcccCcccc---cccCcccccccceee
Q 001867 193 MLNLSYNPFLP---GRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLV---GAIPSSLTELASVVQ 266 (1002)
Q Consensus 193 ~L~Ls~N~~~~---~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~~~~l~~l~~L~~ 266 (1002)
+|++++|.+.. ..++..+.++++|+.|++++|.+.+ +|..+..+++|++|+++.+... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 99999998620 1223334556666666666666663 4556666666666666543222 122233444445555
Q ss_pred eeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCC-cccCCCcccchhccccccc
Q 001867 267 IELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLP-ATIADSPGLYELRLFRNRL 345 (1002)
Q Consensus 267 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l 345 (1002)
|+++++.. +.+|..+..+++|++|++++|.++ +... ..+..+++|++|+++++-.
T Consensus 275 L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~-----------------------~~~~~~~~~~~~~L~~L~L~~~~~ 330 (592)
T 3ogk_B 275 LGLSYMGP-NEMPILFPFAAQIRKLDLLYALLE-----------------------TEDHCTLIQKCPNLEVLETRNVIG 330 (592)
T ss_dssp EEETTCCT-TTGGGGGGGGGGCCEEEETTCCCC-----------------------HHHHHHHHTTCTTCCEEEEEGGGH
T ss_pred cCccccch-hHHHHHHhhcCCCcEEecCCCcCC-----------------------HHHHHHHHHhCcCCCEEeccCccC
Confidence 55444322 233344444445555555444433 2111 2234445555555542211
Q ss_pred CCCCCCCCCCCCCCceEEcc-----------CccccCCCChh-hhccCcccceeeeccccccCCCCcCcC-CCCCcEEEc
Q 001867 346 NGTLPGDLGKNSPLRWVDLS-----------NNQFTGEIPAS-LCEKGELEELLMIYNSFTGQLPDGLGH-CQSLTRVRL 412 (1002)
Q Consensus 346 ~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~l~~-l~~L~~L~L 412 (1002)
.+.++..+..+++|++|+|+ .|.+++..... ...+++|++|+++.|.+++..+..+.. +++|+.|++
T Consensus 331 ~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l 410 (592)
T 3ogk_B 331 DRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRL 410 (592)
T ss_dssp HHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEE
T ss_pred HHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEE
Confidence 11111122334556666666 24444322212 233455566666555555444444433 555666666
Q ss_pred c----CccccCC-----CCCcCCCCCcceEEEcccCc--ccCcccccccc-CCcccEEEccCCcCCCC-Ccccccccccc
Q 001867 413 G----YNRLTGK-----VPPLLWGLPHVYLLELTDNF--LSGEISKNIAG-AANLSLLIISKNNLSGS-LPEEIGFLKSL 479 (1002)
Q Consensus 413 ~----~N~l~~~-----~p~~~~~l~~L~~L~L~~N~--i~~~~~~~~~~-l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L 479 (1002)
+ .|++++. ++..+.++++|+.|++++|. +++.....+.. +++|+.|++++|++++. ++..+..+++|
T Consensus 411 ~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L 490 (592)
T 3ogk_B 411 VLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNL 490 (592)
T ss_dssp EECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTC
T ss_pred eecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCccc
Confidence 4 4445432 11223334445555544221 33322222222 34444444444444421 22223334444
Q ss_pred ccccccccccCCC-CcccccccccCCeeecCCCcCC
Q 001867 480 VVLSGSENKFTGS-LPESLTNLAELGSLDLHANDLS 514 (1002)
Q Consensus 480 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 514 (1002)
+.|++++|.+++. ++..+..+++|+.|+|++|+++
T Consensus 491 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 491 QKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp CEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 4444444444322 1222233444444444444444
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=4.8e-28 Score=280.91 Aligned_cols=247 Identities=21% Similarity=0.173 Sum_probs=221.6
Q ss_pred chhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCc
Q 001867 336 YELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYN 415 (1002)
Q Consensus 336 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N 415 (1002)
..++..++.++ .+|..+. ++++.|+|++|++++..+..|..+++|++|++++|.+++..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 45556666666 4555443 67999999999999888899999999999999999999988899999999999999999
Q ss_pred cccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCc-cccccccccccccccccccCCCCc
Q 001867 416 RLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLP-EEIGFLKSLVVLSGSENKFTGSLP 494 (1002)
Q Consensus 416 ~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 494 (1002)
++++..+..|..+++|+.|+|++|.|....+..|..+++|+.|++++|+..+.++ ..|..+++|+.|++++|+++ .+|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc
Confidence 9998888899999999999999999999888899999999999999954444444 57899999999999999999 566
Q ss_pred ccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-c
Q 001867 495 ESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-K 573 (1002)
Q Consensus 495 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~ 573 (1002)
.+..+++|+.|||++|++++..|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..+..+ +
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 48899999999999999999999999999999999999999998889999999999999999999998777778888 8
Q ss_pred cceEEeccccCcCC
Q 001867 574 LNQLNVSNNRLSGE 587 (1002)
Q Consensus 574 L~~l~ls~N~l~g~ 587 (1002)
|+.|+|++|++.-.
T Consensus 281 L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 281 LERIHLHHNPWNCN 294 (440)
T ss_dssp CCEEECCSSCEECS
T ss_pred CCEEEcCCCCccCC
Confidence 99999999998643
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-29 Score=280.91 Aligned_cols=263 Identities=17% Similarity=0.123 Sum_probs=189.9
Q ss_pred eeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccc
Q 001867 313 SLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNS 392 (1002)
Q Consensus 313 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 392 (1002)
.++++.+.+.......+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+ +..+++|++|++++|.
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~ 91 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNY 91 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCc
Confidence 33444444443444444455566666666666666555566666666666666666664443 6666666666666666
Q ss_pred cccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccc
Q 001867 393 FTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEE 472 (1002)
Q Consensus 393 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 472 (1002)
+++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..+..+..+++|+.|++++|++++..|..
T Consensus 92 l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 163 (317)
T 3o53_A 92 VQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAE 163 (317)
T ss_dssp EEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGG
T ss_pred ccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHH
Confidence 66422 3367888888888887655443 567888888888888877778888888888888888888766666
Q ss_pred cc-cccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccc
Q 001867 473 IG-FLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVL 551 (1002)
Q Consensus 473 ~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L 551 (1002)
+. .+++|+.|++++|++++. |. ...+++|+.|+|++|++++. |..+..+++|+.|+|++|.++ .+|..+..+++|
T Consensus 164 ~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L 239 (317)
T 3o53_A 164 LAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNL 239 (317)
T ss_dssp GGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTC
T ss_pred HhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCC
Confidence 64 678888888888888843 33 33588899999999999864 445888899999999999998 688888899999
Q ss_pred cEEeCcceeee-cccCCccccc-ccceEEec-cccCcCCCC
Q 001867 552 NYLDLSNNRLS-GRIPVGLQNL-KLNQLNVS-NNRLSGELP 589 (1002)
Q Consensus 552 ~~L~Ls~N~l~-~~ip~~~~~l-~L~~l~ls-~N~l~g~~p 589 (1002)
+.|+|++|+++ +.+|..+..+ +|+.|+++ .+.++|..|
T Consensus 240 ~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 240 EHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 99999999998 7778777777 78888888 446666554
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=8.4e-27 Score=278.12 Aligned_cols=261 Identities=30% Similarity=0.357 Sum_probs=133.6
Q ss_pred ceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccc
Q 001867 263 SVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFR 342 (1002)
Q Consensus 263 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 342 (1002)
+++.|++++|.++ .+|..+. ++|+.|++++|+|+. +|.. ...|+.|+|++|++++ +|. .+++|++|++++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~~--l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL--PPELRTLEVSGNQLTS-LPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCCC--CTTCCEEEECSCCCSC-CCC---CCTTCCEEEECS
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCCc--CCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcC
Confidence 4677777777777 4555444 677777777777763 4431 1236666666666663 333 445566666666
Q ss_pred cccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCC
Q 001867 343 NRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVP 422 (1002)
Q Consensus 343 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 422 (1002)
|++++..+ .+++|+.|++++|++++ +|.. +++|++|++++|.+++ +|. .+++|+.|++++|++++ +|
T Consensus 111 N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~ 177 (622)
T 3g06_A 111 NPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP 177 (622)
T ss_dssp CCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC
T ss_pred CcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc
Confidence 66654322 34556666666666553 3322 2445555555555543 222 22344555555555543 22
Q ss_pred CcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCccccccccc
Q 001867 423 PLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAE 502 (1002)
Q Consensus 423 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 502 (1002)
..+++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|.. +++
T Consensus 178 ---------------------------~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~ 222 (622)
T 3g06_A 178 ---------------------------MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSG 222 (622)
T ss_dssp ---------------------------CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTT
T ss_pred ---------------------------ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCC
Confidence 223444555555555542 3321 244555555555554 23322 244
Q ss_pred CCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEecc
Q 001867 503 LGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSN 581 (1002)
Q Consensus 503 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~ 581 (1002)
|+.|+|++|.|++ +| ..+++|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+ .+|..+..+ +|+.|+|++
T Consensus 223 L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 223 LKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp CCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 5555555555553 33 23345555555555555 3444 3445555555555555 445555555 455555555
Q ss_pred ccCcCCCCh
Q 001867 582 NRLSGELPS 590 (1002)
Q Consensus 582 N~l~g~~p~ 590 (1002)
|+++|.+|.
T Consensus 294 N~l~~~~~~ 302 (622)
T 3g06_A 294 NPLSERTLQ 302 (622)
T ss_dssp CCCCHHHHH
T ss_pred CCCCCcCHH
Confidence 555555444
No 317
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=3e-28 Score=288.87 Aligned_cols=195 Identities=18% Similarity=0.126 Sum_probs=134.2
Q ss_pred eeeecCCccEEEEE-EcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcC-CCCceeeeeeEEec
Q 001867 690 VIGSGSSGKVYKVV-LSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKI-RHKNIVKLWCCCTT 767 (1002)
Q Consensus 690 ~LG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 767 (1002)
..+.|++|.+..++ ..-|+.||||++.+..... ...........++|.+|+++|+++ .|+||+++++++.+
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~-------~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed 313 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHG-------ILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN 313 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTT-------CSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC
T ss_pred ccccCCcccccccccccccceeEEEEEecccccc-------cchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE
Confidence 45667777666654 3348899999986542211 011112344567799999999999 69999999999999
Q ss_pred CCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccccC
Q 001867 768 RDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGV 847 (1002)
Q Consensus 768 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl 847 (1002)
++..|+||||++|++|.+++.. .+++++. +|+.||+.||+|+|++ |||||||||+|||++.+|++||+|||+
T Consensus 314 ~~~~yLVMEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGl 385 (569)
T 4azs_A 314 AQSGWLVMEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGS 385 (569)
T ss_dssp SSEEEEEEECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeeccc
Confidence 9999999999999999999984 4567764 4789999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCC
Q 001867 848 AKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLP 902 (1002)
Q Consensus 848 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p 902 (1002)
|+....... .....+||+.|||||++.+ .+..++|+||+|++.+++.++..+
T Consensus 386 Ar~~~~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 386 IVTTPQDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp EESCC---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CeeCCCCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 987654432 2335679999999999875 467789999999998887665443
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6e-29 Score=275.08 Aligned_cols=267 Identities=18% Similarity=0.137 Sum_probs=130.8
Q ss_pred cchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCC
Q 001867 240 LVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYEN 319 (1002)
Q Consensus 240 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N 319 (1002)
++.++++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---------------- 75 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---------------- 75 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE----------------
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh----------------
Confidence 4444555555554444444444555555555555555444455555555555555555543221
Q ss_pred cccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCC
Q 001867 320 RLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPD 399 (1002)
Q Consensus 320 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 399 (1002)
+..+++|++|++++|++++.. ..++|++|++++|++++.. +.
T Consensus 76 ---------~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~------------------------~~ 117 (317)
T 3o53_A 76 ---------LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVS------------------------CS 117 (317)
T ss_dssp ---------ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEE------------------------EC
T ss_pred ---------hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcC------------------------cc
Confidence 333333333333333333211 1134444444444444322 22
Q ss_pred cCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccc-cCCcccEEEccCCcCCCCCccccccccc
Q 001867 400 GLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIA-GAANLSLLIISKNNLSGSLPEEIGFLKS 478 (1002)
Q Consensus 400 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 478 (1002)
.+++|++|++++|++++..+..+..+++|+.|+|++|.+++..+..+. .+++|+.|+|++|++++. |. ...+++
T Consensus 118 ---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~ 192 (317)
T 3o53_A 118 ---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAK 192 (317)
T ss_dssp ---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTT
T ss_pred ---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-cccccc
Confidence 133455555555555544444455555555555555555544444442 445555555555555532 22 223555
Q ss_pred cccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccc-cCCCCCccccccccEEeCc
Q 001867 479 LVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFY-GNIPEDIGNLSVLNYLDLS 557 (1002)
Q Consensus 479 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~ip~~~~~l~~L~~L~Ls 557 (1002)
|+.|++++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.++ +.+|..++.+++|+.|+++
T Consensus 193 L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 193 LKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 5555555555553 3334555555555555555555 34555555555566666665555 4555555555556666655
Q ss_pred -ceeeecccCC
Q 001867 558 -NNRLSGRIPV 567 (1002)
Q Consensus 558 -~N~l~~~ip~ 567 (1002)
.+.++|..|.
T Consensus 271 ~~~~l~~~~~~ 281 (317)
T 3o53_A 271 TVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHSSSSC
T ss_pred CchhccCCchh
Confidence 3345554443
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=9.8e-27 Score=277.53 Aligned_cols=268 Identities=31% Similarity=0.399 Sum_probs=207.1
Q ss_pred cccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecC
Q 001867 238 AKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLY 317 (1002)
Q Consensus 238 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~ 317 (1002)
.+++.|++++|.++ .+|..+. ++|+.|+|++|.++. +|. .+++|++|+|++|++++ +|. ....|+.|+|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls 109 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV--LPPGLLELSIF 109 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC--CCTTCCEEEEC
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC--CCCCCCEEECc
Confidence 46899999999999 6676665 799999999999994 554 57899999999999985 555 22359999999
Q ss_pred CCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCC
Q 001867 318 ENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQL 397 (1002)
Q Consensus 318 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 397 (1002)
+|++++. |. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +|. ...+|+.|++++|.+++ +
T Consensus 110 ~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 9999964 43 57889999999999996 4443 4889999999999995 444 34689999999999996 5
Q ss_pred CCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccc
Q 001867 398 PDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLK 477 (1002)
Q Consensus 398 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 477 (1002)
| ..+++|+.|++++|++++ +|.. +++|+.|++++|.+ + .+|.. ++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l------------------------~-~l~~~---~~ 221 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRL------------------------T-SLPAL---PS 221 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC------------------------S-SCCCC---CT
T ss_pred c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcc------------------------c-ccCCC---CC
Confidence 5 457899999999999985 3332 24455555555544 4 23322 35
Q ss_pred ccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCc
Q 001867 478 SLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLS 557 (1002)
Q Consensus 478 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls 557 (1002)
+|+.|++++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|.|+ .+|..++++++|+.|+|+
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 66677777777764 45 345778888888888874 454 5678888888888888 788889999999999999
Q ss_pred ceeeecccCCccccc
Q 001867 558 NNRLSGRIPVGLQNL 572 (1002)
Q Consensus 558 ~N~l~~~ip~~~~~l 572 (1002)
+|++++.+|..+..+
T Consensus 293 ~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 293 GNPLSERTLQALREI 307 (622)
T ss_dssp SCCCCHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHhc
Confidence 999998888877665
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=5.5e-28 Score=282.95 Aligned_cols=233 Identities=18% Similarity=0.116 Sum_probs=147.4
Q ss_pred cccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEc
Q 001867 333 PGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRL 412 (1002)
Q Consensus 333 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L 412 (1002)
++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|++++|.+++..+ .++|++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 355555555555555555555666666666666666654443 5555555555555555554222 266777777
Q ss_pred cCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccc-cccccccccccccccCC
Q 001867 413 GYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIG-FLKSLVVLSGSENKFTG 491 (1002)
Q Consensus 413 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 491 (1002)
++|++++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+|++|++++..|..+. .+++|+.|+|++|.|++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 77777655443 246677777777777776666677777777777777777766666665 56777777777777764
Q ss_pred CCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeee-cccCCccc
Q 001867 492 SLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLS-GRIPVGLQ 570 (1002)
Q Consensus 492 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~-~~ip~~~~ 570 (1002)
. |. +..+++|+.|+|++|.|++.+| .+..+++|+.|+|++|.|++ +|..++.+++|+.|+|++|+++ +.+|..+.
T Consensus 184 ~-~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 V-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp E-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred c-cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 3 22 3346777777777777775433 36777777777777777773 6666777777777777777776 55555555
Q ss_pred cc-ccceEEe
Q 001867 571 NL-KLNQLNV 579 (1002)
Q Consensus 571 ~l-~L~~l~l 579 (1002)
.+ .+..+++
T Consensus 260 ~l~~L~~l~~ 269 (487)
T 3oja_A 260 KNQRVQTVAK 269 (487)
T ss_dssp TCHHHHHHHH
T ss_pred hCCCCcEEec
Confidence 44 4444444
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.1e-27 Score=280.40 Aligned_cols=223 Identities=19% Similarity=0.189 Sum_probs=199.5
Q ss_pred CCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEE
Q 001867 355 KNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLL 434 (1002)
Q Consensus 355 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 434 (1002)
..++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| ++.+++|++|+|++|++++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44589999999999999889999999999999999999998776 9999999999999999986443 3899999
Q ss_pred EcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCccccc-ccccCCeeecCCCcC
Q 001867 435 ELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLT-NLAELGSLDLHANDL 513 (1002)
Q Consensus 435 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l 513 (1002)
++++|.|++..+.. +++|+.|+|++|++++..|..++.+++|+.|+|++|++++..|..+. .+++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 99999999877654 57899999999999998899999999999999999999998888886 799999999999999
Q ss_pred CcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCc-CCCChh
Q 001867 514 SGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLS-GELPSL 591 (1002)
Q Consensus 514 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~-g~~p~~ 591 (1002)
++..+ +..+++|+.|+|++|.+++ +|+.++.+++|+.|+|++|+|++ +|..+..+ +|+.|++++|++. +.+|..
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 97743 3459999999999999996 56669999999999999999996 78888887 8999999999998 555543
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.7e-26 Score=247.55 Aligned_cols=217 Identities=23% Similarity=0.276 Sum_probs=157.9
Q ss_pred CCCCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCC
Q 001867 54 DSPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTL 133 (1002)
Q Consensus 54 ~~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 133 (1002)
.++|.|.|+.|.... .++.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.|+...
T Consensus 2 ~~~C~~~~~~C~c~~-~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEET-TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCC-CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 468999999987543 35679999999985 565444 58999999999999887788999999999999999998766
Q ss_pred CccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCC
Q 001867 134 TPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNL 213 (1002)
Q Consensus 134 ~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l 213 (1002)
+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|+++++|++|+|++|.+. ...+..|..+
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l 156 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKL 156 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCC
Confidence 667788999999999999998777777888888888888888888777777788888888888888752 2222335666
Q ss_pred CccchhhccCcccccccccccccccccchhcccCcccccccCcccccccceeeeeccCCccc
Q 001867 214 TNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLT 275 (1002)
Q Consensus 214 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 275 (1002)
++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 157 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 66666666666666555555555556666666555555444444444444444444444443
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1.1e-30 Score=316.09 Aligned_cols=455 Identities=18% Similarity=0.174 Sum_probs=231.7
Q ss_pred CCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCC---CCCCCC------------ccccCccc
Q 001867 56 PCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSIN---STLPDD------------ISACQNLQ 120 (1002)
Q Consensus 56 ~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~---~~~p~~------------~~~l~~L~ 120 (1002)
|++|+++.. .....+++++..-. .....+..+++|++|+|+++... +..|.. +..+++|+
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhh----hhceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 457998822 12345566543322 22245678889999999987532 122222 23567788
Q ss_pred ccccccccccCCCCcccc-ccCCccccccccc-cccCC-CCcccccccccceeeeccccccCccccccc----ccccccc
Q 001867 121 HLDLSQNLLTGTLTPALA-DLPNLKFLDLTGN-NFSGD-IPESFGRFQKLEVISLVYNLLDGTIPAFLG----NISTLKM 193 (1002)
Q Consensus 121 ~L~Ls~N~l~~~~~~~~~-~L~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l~~L~~ 193 (1002)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 888888877765555554 5778888888877 44422 344445677788888887777655444433 4557777
Q ss_pred ccccCCC--CCCCCCCcccCCCCccchhhccCc-ccccccccccccccccchhcccCc-------ccccccCcccccccc
Q 001867 194 LNLSYNP--FLPGRIPPELGNLTNLEILWLTEC-NLVGEIPDSLGRLAKLVDLDLALN-------NLVGAIPSSLTELAS 263 (1002)
Q Consensus 194 L~Ls~N~--~~~~~~p~~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~N-------~l~~~~~~~l~~l~~ 263 (1002)
|++++|. +....++..+.++++|++|++++| .+. .++..+..+++|++|+++.+ .+.+ ++..+.++++
T Consensus 189 L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~ 266 (594)
T 2p1m_B 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKE 266 (594)
T ss_dssp EECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTT
T ss_pred EEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCC
Confidence 7777664 100011111233466666666666 333 25555556666666664333 2222 1223444444
Q ss_pred eeee-eccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcC-CcccCCCcccchhccc
Q 001867 264 VVQI-ELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSL-PATIADSPGLYELRLF 341 (1002)
Q Consensus 264 L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~ 341 (1002)
|+.| .+.+... +.++..+..+++|+.|++++|.+ ++.. +..+..+++|++|+++
T Consensus 267 L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l-----------------------~~~~l~~~~~~~~~L~~L~l~ 322 (594)
T 2p1m_B 267 LRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATV-----------------------QSYDLVKLLCQCPKLQRLWVL 322 (594)
T ss_dssp CCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCC-----------------------CHHHHHHHHTTCTTCCEEEEE
T ss_pred cccccCCcccch-hhHHHHHHhhCCCCEEEccCCCC-----------------------CHHHHHHHHhcCCCcCEEeCc
Confidence 4444 2222111 12222223344444444444443 3211 1112344444444444
Q ss_pred ccccCCC-CCCCCCCCCCCceEEcc---------CccccCCCChhhh-ccCcccceeeeccccccCCCCcCc-CCCCCcE
Q 001867 342 RNRLNGT-LPGDLGKNSPLRWVDLS---------NNQFTGEIPASLC-EKGELEELLMIYNSFTGQLPDGLG-HCQSLTR 409 (1002)
Q Consensus 342 ~N~l~~~-~p~~~~~l~~L~~L~Ls---------~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~ 409 (1002)
+| +... ++.....+++|+.|+++ .|.+++.....+. .+++|+.|.+..|.+++..+..+. .+++|+.
T Consensus 323 ~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~ 401 (594)
T 2p1m_B 323 DY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTR 401 (594)
T ss_dssp GG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCE
T ss_pred Cc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcce
Confidence 44 2110 00011124445555552 2333322222222 244555555544544433333232 3445555
Q ss_pred EEccCccccCCCCCcCCCCCcceEEEcccCcccCc-----cccccccCCcccEEEccCCcCCCCCcccccc-cccccccc
Q 001867 410 VRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGE-----ISKNIAGAANLSLLIISKNNLSGSLPEEIGF-LKSLVVLS 483 (1002)
Q Consensus 410 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~ 483 (1002)
|+|+.|...+ -|.++.. ++..+..+++|+.|++++ .+++..+..++. +++|+.|+
T Consensus 402 L~L~~~~~~~------------------~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~ 462 (594)
T 2p1m_B 402 FRLCIIEPKA------------------PDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLS 462 (594)
T ss_dssp EEEEESSTTC------------------CCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEE
T ss_pred eEeecccCCC------------------cccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEee
Confidence 5554110000 0223211 111244566777777765 555444445554 67777777
Q ss_pred ccccccCCCCcccc-cccccCCeeecCCCcCCccccc-ccccccccccccccCcccccCCCCCc-cccccccEEeCccee
Q 001867 484 GSENKFTGSLPESL-TNLAELGSLDLHANDLSGELPS-SVSSWKKLNELNLADNLFYGNIPEDI-GNLSVLNYLDLSNNR 560 (1002)
Q Consensus 484 Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~ip~~~-~~l~~L~~L~Ls~N~ 560 (1002)
|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|++++|.++..-...+ ..+++|+...+..+.
T Consensus 463 L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 463 VAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp EESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred ccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 77777765444444 5577788888888887654443 34557788888888887754333334 346677666666554
Q ss_pred e
Q 001867 561 L 561 (1002)
Q Consensus 561 l 561 (1002)
-
T Consensus 543 ~ 543 (594)
T 2p1m_B 543 A 543 (594)
T ss_dssp C
T ss_pred c
Confidence 3
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.5e-25 Score=242.67 Aligned_cols=207 Identities=22% Similarity=0.203 Sum_probs=135.7
Q ss_pred ccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccC
Q 001867 383 LEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISK 462 (1002)
Q Consensus 383 L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~ 462 (1002)
|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+..+.++++|+.|++++
T Consensus 30 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 109 (276)
T 2z62_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (276)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCC
Confidence 44444444444444444455555555555555555555555555556666666666666555555666666666666666
Q ss_pred CcCCCCCccccccccccccccccccccCCC-CcccccccccCCeeecCCCcCCcccccccccccccc----cccccCccc
Q 001867 463 NNLSGSLPEEIGFLKSLVVLSGSENKFTGS-LPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLN----ELNLADNLF 537 (1002)
Q Consensus 463 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l 537 (1002)
|++.+..+..++.+++|+.|++++|++++. +|..+..+++|++|+|++|++++..+..+..+++|+ .|++++|.+
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l 189 (276)
T 2z62_A 110 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (276)
T ss_dssp SCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCC
T ss_pred CCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcc
Confidence 666655555667777777777777777653 577777777788888888877777777777777776 677888888
Q ss_pred ccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCCh
Q 001867 538 YGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPS 590 (1002)
Q Consensus 538 ~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~ 590 (1002)
++ +|.......+|++|+|++|++++..+..+..+ +|+.|+|++|++++..|.
T Consensus 190 ~~-~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 190 NF-IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CE-ECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred cc-cCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 74 44444444578888888888886655556666 688888888888877764
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2e-25 Score=241.82 Aligned_cols=209 Identities=22% Similarity=0.147 Sum_probs=168.7
Q ss_pred CCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEc
Q 001867 357 SPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLEL 436 (1002)
Q Consensus 357 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 436 (1002)
++|++|+|++|++++..+..|..+++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|.++++|+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35677777777777666666777777777777777777666667777888888888888887777777888888888888
Q ss_pred ccCcccCccccccccCCcccEEEccCCcCCCC-CccccccccccccccccccccCCCCcccccccccCC----eeecCCC
Q 001867 437 TDNFLSGEISKNIAGAANLSLLIISKNNLSGS-LPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELG----SLDLHAN 511 (1002)
Q Consensus 437 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N 511 (1002)
++|.+.+..+..+..+++|+.|++++|++++. +|..++.+++|+.|++++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 88888877777788888888888888888763 588888999999999999999877777888888887 8999999
Q ss_pred cCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccC
Q 001867 512 DLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIP 566 (1002)
Q Consensus 512 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip 566 (1002)
++++..+..+.. .+|+.|+|++|.+++..+..+..+++|+.|+|++|++++..|
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 999776666655 489999999999996666667899999999999999998665
No 326
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=6.9e-26 Score=267.17 Aligned_cols=194 Identities=14% Similarity=0.195 Sum_probs=150.1
Q ss_pred CcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCceeeeeeEE
Q 001867 686 DEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIVKLWCCC 765 (1002)
Q Consensus 686 ~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 765 (1002)
...+.||+|+||.||+|.. .++.+|+|+...... ...........+++.+|++++++++||||+++..++
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~---------~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~ 408 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGY---------RDERLDENIRKSRTAREARYLALVKDFGIPAPYIFD 408 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTT---------SCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccc---------cchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEE
Confidence 3467899999999999954 478899998743211 111222334466789999999999999999766666
Q ss_pred ecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccc
Q 001867 766 TTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADF 845 (1002)
Q Consensus 766 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~Df 845 (1002)
...+..|+||||+++++|.++++. +..++.|++.||+|||++ +|+||||||+||+++. .+||+||
T Consensus 409 ~~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DF 473 (540)
T 3en9_A 409 VDLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDF 473 (540)
T ss_dssp EETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCC
T ss_pred EeCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEEC
Confidence 677788999999999999999974 568999999999999999 9999999999999998 9999999
Q ss_pred cCcccccCCCCCc-----ccccccccccccCcccccc--CCCCCccchhhHHHHHHHHHhCCCCCC
Q 001867 846 GVAKVVDASGKPK-----SMSVIAGSCGYIAPEYAYT--LRVNEKSDIYSFGVVILELVTGRLPVD 904 (1002)
Q Consensus 846 Gl~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~ell~g~~p~~ 904 (1002)
|+++......... ......||+.|||||++.. ..|+.++|+|+..+-..+-+.++.+|.
T Consensus 474 Gla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 474 GLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp TTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 9999875432111 1235679999999999887 568888999999999999888777663
No 327
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=1.8e-29 Score=305.54 Aligned_cols=404 Identities=17% Similarity=0.141 Sum_probs=177.1
Q ss_pred CccccCcccccccccccccC---CCCcc------------ccccCCccccccccccccCCCCcccc-cccccceeeeccc
Q 001867 112 DISACQNLQHLDLSQNLLTG---TLTPA------------LADLPNLKFLDLTGNNFSGDIPESFG-RFQKLEVISLVYN 175 (1002)
Q Consensus 112 ~~~~l~~L~~L~Ls~N~l~~---~~~~~------------~~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N 175 (1002)
.+..+++|++|+|+++.... ..|.. +..+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 35556777777777764221 11111 12345566666666655544444443 4555555555555
Q ss_pred -cccCc-cccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCccccccccccc----ccccccchhcccCcc
Q 001867 176 -LLDGT-IPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSL----GRLAKLVDLDLALNN 249 (1002)
Q Consensus 176 -~l~~~-~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~----~~l~~L~~L~L~~N~ 249 (1002)
.++.. ++..+.++++|++|+|++|. +++..+..+ ..+++|++|++++|.
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~-------------------------i~~~~~~~l~~~~~~~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESD-------------------------VDDVSGHWLSHFPDTYTSLVSLNISCLA 195 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCE-------------------------EECCCGGGGGGSCTTCCCCCEEECTTCC
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCc-------------------------cCCcchHHHHHHhhcCCcCcEEEecccC
Confidence 33321 23333345555555555554 332222222 133455555555544
Q ss_pred --ccc-ccCcccccccceeeeeccCC-cccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcC
Q 001867 250 --LVG-AIPSSLTELASVVQIELYNN-SLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSL 325 (1002)
Q Consensus 250 --l~~-~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~ 325 (1002)
+.. .++..+..+++|+.|++++| .+. .++..+..+++|+.|+++.+.. +++.|.+.+ +
T Consensus 196 ~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~----------------~~~~~~~~~-l 257 (594)
T 2p1m_B 196 SEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTA----------------EVRPDVYSG-L 257 (594)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCC----------------CCCHHHHHH-H
T ss_pred CcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccC----------------ccchhhHHH-H
Confidence 110 01111223455556666555 222 2444555566666666544321 012222222 2
Q ss_pred CcccCCCcccchh-cccccccCCCCCCCCCCCCCCceEEccCccccCCCCh-hhhccCcccceeeecccccc-CCCCcCc
Q 001867 326 PATIADSPGLYEL-RLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPA-SLCEKGELEELLMIYNSFTG-QLPDGLG 402 (1002)
Q Consensus 326 p~~~~~l~~L~~L-~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~-~~p~~l~ 402 (1002)
+..+.++++|+.| .+.+... +.++..+..+++|+.|+|++|.+++.... .+..+++|++|++++| ++. .++....
T Consensus 258 ~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~ 335 (594)
T 2p1m_B 258 SVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLAS 335 (594)
T ss_dssp HHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHH
T ss_pred HHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHH
Confidence 2244555555555 2222111 12222233456777777777776543222 2345667777777766 331 1222223
Q ss_pred CCCCCcEEEccC---------ccccCCCCCcC-CCCCcceEEEcccCcccCccccccc-cCCcccEEEcc--C----CcC
Q 001867 403 HCQSLTRVRLGY---------NRLTGKVPPLL-WGLPHVYLLELTDNFLSGEISKNIA-GAANLSLLIIS--K----NNL 465 (1002)
Q Consensus 403 ~l~~L~~L~L~~---------N~l~~~~p~~~-~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~Ls--~----N~l 465 (1002)
.+++|++|++++ |.+++.....+ .++++|+.|+++.|.+++.....+. .+++|+.|+++ + |++
T Consensus 336 ~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l 415 (594)
T 2p1m_B 336 TCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYL 415 (594)
T ss_dssp HCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTT
T ss_pred hCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccc
Confidence 466777777733 33332111111 1245555555555555444333333 34555555555 2 333
Q ss_pred CCCC-----ccccccccccccccccccccCCCCcccccc-cccCCeeecCCCcCCccccccc-ccccccccccccCcccc
Q 001867 466 SGSL-----PEEIGFLKSLVVLSGSENKFTGSLPESLTN-LAELGSLDLHANDLSGELPSSV-SSWKKLNELNLADNLFY 538 (1002)
Q Consensus 466 ~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~ 538 (1002)
++.. +..+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.++
T Consensus 416 ~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 416 TLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp TCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred cCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 3111 11133344444444443 333322223322 4444444444444443333332 33444444444444443
Q ss_pred cCCCC-CccccccccEEeCcceee
Q 001867 539 GNIPE-DIGNLSVLNYLDLSNNRL 561 (1002)
Q Consensus 539 ~~ip~-~~~~l~~L~~L~Ls~N~l 561 (1002)
+..+. .+..+++|++|+|++|++
T Consensus 495 ~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 495 DKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHHHhCCCCCEEeeeCCCC
Confidence 22222 122344444444444444
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.7e-25 Score=241.55 Aligned_cols=182 Identities=23% Similarity=0.217 Sum_probs=100.5
Q ss_pred cCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccccccc
Q 001867 402 GHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVV 481 (1002)
Q Consensus 402 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 481 (1002)
..+++|++|++++|++++. ..+..+++|++|++++|.+++..+..+..+++|+.|++++|++++..|..++.+++|+.
T Consensus 60 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 137 (272)
T 3rfs_A 60 QYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137 (272)
T ss_dssp GGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCE
Confidence 3444444444444444431 23444444444444444444444444455555555555555555444444555555666
Q ss_pred ccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceee
Q 001867 482 LSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRL 561 (1002)
Q Consensus 482 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l 561 (1002)
|++++|++++..+..+..+++|+.|+|++|++++..|..|+.+++|+.|+|++|.+++..|..++.+++|++|+|++|++
T Consensus 138 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 66666655554444555666666666666666655555566666666666666666655555566666666666666666
Q ss_pred ecccCCcccccccceEEeccccCcCCCChh
Q 001867 562 SGRIPVGLQNLKLNQLNVSNNRLSGELPSL 591 (1002)
Q Consensus 562 ~~~ip~~~~~l~L~~l~ls~N~l~g~~p~~ 591 (1002)
++..| .++.|+++.|.++|.+|..
T Consensus 218 ~~~~~------~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 218 DCTCP------GIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCCTT------TTHHHHHHHHHTGGGBBCT
T ss_pred cccCc------HHHHHHHHHHhCCCcccCc
Confidence 65444 2455566666666666643
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=3.1e-24 Score=231.38 Aligned_cols=201 Identities=22% Similarity=0.216 Sum_probs=105.7
Q ss_pred CceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEccc
Q 001867 359 LRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTD 438 (1002)
Q Consensus 359 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 438 (1002)
.+.+++++|+++ .+|..+. +++++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 455666666655 3343322 3445555555555544444555566666666666666554444455555555555555
Q ss_pred CcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccc
Q 001867 439 NFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELP 518 (1002)
Q Consensus 439 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 518 (1002)
|.+.+..+..+..+++|+.|++++|++++..|..++.+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 55555444445555555555555555554444445555555555555555554333445555555555555555555444
Q ss_pred cccccccccccccccCcccccCCCCCccccccccEEeCcceeee
Q 001867 519 SSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLS 562 (1002)
Q Consensus 519 ~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~ 562 (1002)
..|..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 44555555555555555555333334455555555555555544
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=7.8e-25 Score=236.29 Aligned_cols=187 Identities=20% Similarity=0.141 Sum_probs=110.3
Q ss_pred hhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCccc
Q 001867 377 LCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLS 456 (1002)
Q Consensus 377 ~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 456 (1002)
+..+++|++|++++|.+++. ..+..+++|++|+|++|++++..+..|..+++|+.|++++|++++..+..+..+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 33344444444444444331 2344555555555555555555555555555555555555555555555555566666
Q ss_pred EEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcc
Q 001867 457 LLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNL 536 (1002)
Q Consensus 457 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 536 (1002)
.|++++|++++..|..++.+++|+.|++++|++++..+..+..+++|+.|+|++|++++..|..++.+++|+.|+|++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 66666666665555555666666666666666665555556666666666666666666666666666667777777666
Q ss_pred cccCCCCCccccccccEEeCcceeeecccCCccccc
Q 001867 537 FYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL 572 (1002)
Q Consensus 537 l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l 572 (1002)
+.+. +++|+.|+++.|+++|.+|..++.+
T Consensus 217 ~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 217 WDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp BCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred cccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 6543 3356666777777777777666554
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=7.1e-24 Score=230.60 Aligned_cols=133 Identities=31% Similarity=0.267 Sum_probs=69.0
Q ss_pred cCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccc
Q 001867 451 GAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNEL 530 (1002)
Q Consensus 451 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 530 (1002)
.+++|+.|++++|+++ .+|..+..+++|+.|++++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 3444444555555444 444445555555555555555554444455555555555555555555545555555555555
Q ss_pred cccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCc
Q 001867 531 NLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLS 585 (1002)
Q Consensus 531 ~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~ 585 (1002)
+|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+... +|+.|+|++|++.
T Consensus 154 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 55555555333333445555555555555555 344444333 4555555555554
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=9.8e-24 Score=229.49 Aligned_cols=203 Identities=23% Similarity=0.186 Sum_probs=139.8
Q ss_pred CCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcce
Q 001867 353 LGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVY 432 (1002)
Q Consensus 353 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 432 (1002)
+..+++++.+++++|.++ .+|..+. ++++.|++++|.+++..+..|.++++|++|+|++|++++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 455666777777777777 4444443 4677777777777766666777777777777777777654332 5667777
Q ss_pred EEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCc
Q 001867 433 LLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHAND 512 (1002)
Q Consensus 433 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 512 (1002)
.|+|++|+++ .+|..+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 7777777776 445566667777777777777776555667777777777777777776555666677777777777777
Q ss_pred CCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeee
Q 001867 513 LSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLS 562 (1002)
Q Consensus 513 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~ 562 (1002)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 77665566677777777777777776 66777777777777777777765
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=3.6e-24 Score=235.93 Aligned_cols=223 Identities=21% Similarity=0.223 Sum_probs=174.4
Q ss_pred CCceEEccCccccCCCCh---hhhccCcccceeeeccccccCCCCcC--cCCCCCcEEEccCccccCCCC----CcCCCC
Q 001867 358 PLRWVDLSNNQFTGEIPA---SLCEKGELEELLMIYNSFTGQLPDGL--GHCQSLTRVRLGYNRLTGKVP----PLLWGL 428 (1002)
Q Consensus 358 ~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~l~~N~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l 428 (1002)
.++.+.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|++++..+ ..++.+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 466677776666522111 12234568888888888888888877 888888888888888887655 345578
Q ss_pred CcceEEEcccCcccCccccccccCCcccEEEccCCcCCCC--C--ccccccccccccccccccccCCCCcc----ccccc
Q 001867 429 PHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGS--L--PEEIGFLKSLVVLSGSENKFTGSLPE----SLTNL 500 (1002)
Q Consensus 429 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l 500 (1002)
++|++|+|++|.+.+..+..+..+++|+.|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 8888888888888888888888888999999999987642 2 234578899999999999997 4444 35778
Q ss_pred ccCCeeecCCCcCCcccccccccc---cccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccce
Q 001867 501 AELGSLDLHANDLSGELPSSVSSW---KKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQ 576 (1002)
Q Consensus 501 ~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~ 576 (1002)
++|++|||++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+ +|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998888888777 69999999999999 7888875 7999999999999963 43 4556 7999
Q ss_pred EEeccccCcC
Q 001867 577 LNVSNNRLSG 586 (1002)
Q Consensus 577 l~ls~N~l~g 586 (1002)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999874
No 334
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=8.3e-26 Score=252.44 Aligned_cols=264 Identities=20% Similarity=0.262 Sum_probs=193.0
Q ss_pred CCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCC--CCCCEEeccCCCCCCCCCCCccccCcccccccccccccCC-
Q 001867 56 PCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRL--ENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGT- 132 (1002)
Q Consensus 56 ~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~- 132 (1002)
|++|+++.|++. .++.+|++++++. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 558999988743 4678999998876 5667777 8999999999999887665 55789999999999998865
Q ss_pred CCccccccCCccccccccccccCCCCcccccccccceeeeccc-cccCc-cccccccccccccccccCC-CCCCCCCCcc
Q 001867 133 LTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYN-LLDGT-IPAFLGNISTLKMLNLSYN-PFLPGRIPPE 209 (1002)
Q Consensus 133 ~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~Ls~N-~~~~~~~p~~ 209 (1002)
++..+..+++|++|+|++|++++..|..|+.+++|++|+|++| .+++. ++..+.++++|++|++++| .+....++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 7777888999999999999988888888888999999999998 67753 6777888889999999988 6532235666
Q ss_pred cCCCC-ccchhhccCc--ccc-cccccccccccccchhcccCcc-cccccCcccccccceeeeeccCCc-ccCCCCCccc
Q 001867 210 LGNLT-NLEILWLTEC--NLV-GEIPDSLGRLAKLVDLDLALNN-LVGAIPSSLTELASVVQIELYNNS-LTGDLPTGWS 283 (1002)
Q Consensus 210 ~~~l~-~L~~L~L~~n--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~ 283 (1002)
+..++ +|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+.
T Consensus 190 ~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~ 269 (336)
T 2ast_B 190 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG 269 (336)
T ss_dssp HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGG
T ss_pred HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHh
Confidence 77788 8888888888 444 4556677778888888888887 666667777777888888888874 2222222466
Q ss_pred cccccceeeccccccCCCCCccCCCC--CcceeecCCCcccCcCCccc
Q 001867 284 NLTSLRLLDASMNDLTGPIPDDLTRL--PLESLNLYENRLEGSLPATI 329 (1002)
Q Consensus 284 ~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~L~~N~l~~~~p~~~ 329 (1002)
++++|+.|++++| ++. ..+..+ .+..|++++|++++..|..+
T Consensus 270 ~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 270 EIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp GCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred cCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcc
Confidence 7777777777777 321 112221 14444555555554444443
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=4.6e-23 Score=219.64 Aligned_cols=158 Identities=19% Similarity=0.182 Sum_probs=77.9
Q ss_pred CCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccccccccccc
Q 001867 406 SLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGS 485 (1002)
Q Consensus 406 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 485 (1002)
+|+.|+|++|++++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..+..++.+++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555554444445445555555555554444444444444555555555555544444444444555555555
Q ss_pred ccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeec
Q 001867 486 ENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 486 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
+|+|++..+..|..+++|+.|+|++|+|++..|..|+.+++|+.|+|++|++++..|..+..+++|+.|+|++|++++
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 555544333344445555555555555554444445555555555555555554444444455555555555555543
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=3.8e-25 Score=249.43 Aligned_cols=253 Identities=19% Similarity=0.174 Sum_probs=137.2
Q ss_pred ecCCCcccCcCCcccCCCcccchhcccccccCCCCC----CCCCCCC-CCceEEccCccccCCCChhhhcc-----Cccc
Q 001867 315 NLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLP----GDLGKNS-PLRWVDLSNNQFTGEIPASLCEK-----GELE 384 (1002)
Q Consensus 315 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~ 384 (1002)
.++.|.+++.+|..+...++|++|+|++|++++..+ ..+..++ +|++|+|++|++++..+..++.+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 334444444444444333444444444444443333 3344444 56666666666665555555554 5556
Q ss_pred ceeeeccccccCCCCcCc----CC-CCCcEEEccCccccCCCCCcC----CC-CCcceEEEcccCcccCccccc----cc
Q 001867 385 ELLMIYNSFTGQLPDGLG----HC-QSLTRVRLGYNRLTGKVPPLL----WG-LPHVYLLELTDNFLSGEISKN----IA 450 (1002)
Q Consensus 385 ~L~l~~N~l~~~~p~~l~----~l-~~L~~L~L~~N~l~~~~p~~~----~~-l~~L~~L~L~~N~i~~~~~~~----~~ 450 (1002)
+|++++|.+++..+..+. .+ ++|++|+|++|++++..+..+ .. .++|+.|+|++|.+++..... +.
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 163 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILA 163 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHh
Confidence 666666655554444332 22 566666666666665444332 22 246666666666666433222 23
Q ss_pred cCC-cccEEEccCCcCCCCCccccccc-----cccccccccccccCCC----Cccccccc-ccCCeeecCCCcCCcccc-
Q 001867 451 GAA-NLSLLIISKNNLSGSLPEEIGFL-----KSLVVLSGSENKFTGS----LPESLTNL-AELGSLDLHANDLSGELP- 518 (1002)
Q Consensus 451 ~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l~~~~p- 518 (1002)
... +|+.|+|++|++++..+..++.. ++|+.|+|++|++++. ++..+..+ ++|+.|||++|++++..+
T Consensus 164 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 164 AIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred cCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 333 67777777777765555444433 4677777777776642 34444442 467777777777765544
Q ss_pred ---cccccccccccccccCccccc-------CCCCCccccccccEEeCcceeeecccCC
Q 001867 519 ---SSVSSWKKLNELNLADNLFYG-------NIPEDIGNLSVLNYLDLSNNRLSGRIPV 567 (1002)
Q Consensus 519 ---~~~~~l~~L~~L~Ls~N~l~~-------~ip~~~~~l~~L~~L~Ls~N~l~~~ip~ 567 (1002)
..+..+++|+.|+|++|.+.+ .++..+.++++|++|||++|++.+..|.
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred HHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 234555667777777776432 2334556666677777777776655443
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=2.3e-23 Score=228.83 Aligned_cols=194 Identities=24% Similarity=0.296 Sum_probs=140.7
Q ss_pred CCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceE
Q 001867 354 GKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYL 433 (1002)
Q Consensus 354 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 433 (1002)
..+++|+.|++++|.++. ++ .+..+++|++|++++|.+++..+ +..+++|++|+|++|++++. ..+..+++|+.
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 345566666666666663 33 45666666666666666664433 67777777777777777653 25677777777
Q ss_pred EEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcC
Q 001867 434 LELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDL 513 (1002)
Q Consensus 434 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 513 (1002)
|++++|.+++..+ +..+++|+.|++++|++++..+ ++.+++|+.|++++|++++ ++. +..+++|+.|+|++|++
T Consensus 112 L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCcc
Confidence 7777777776432 7777888888888888875433 7788888888888888885 333 78888888888888888
Q ss_pred CcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeec
Q 001867 514 SGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 514 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
++..+ +..+++|+.|+|++|++++.. .+..+++|+.|+|++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 86554 788888888888888888544 37888888888888888875
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=7.7e-23 Score=217.88 Aligned_cols=209 Identities=21% Similarity=0.211 Sum_probs=175.2
Q ss_pred CCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccc
Q 001867 405 QSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSG 484 (1002)
Q Consensus 405 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 484 (1002)
.+.++++++++.++ .+|..+. ++++.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..+..+++|+.|++
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45788999999998 5665554 68999999999999999999999999999999999999888888999999999999
Q ss_pred cccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecc
Q 001867 485 SENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGR 564 (1002)
Q Consensus 485 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ 564 (1002)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..++.+++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999987788899999999999999999988888899999999999999999976677899999999999999999988
Q ss_pred cCCccccc-ccceEEeccccCcCCCChh-hhhhc------ccccccCCCCCCCCCCC-CCCC
Q 001867 565 IPVGLQNL-KLNQLNVSNNRLSGELPSL-FAKEM------YRNSFLGNPGLCGDLEG-LCDG 617 (1002)
Q Consensus 565 ip~~~~~l-~L~~l~ls~N~l~g~~p~~-~~~~~------~~~~~~~n~~~cg~~~~-~c~~ 617 (1002)
.|..+..+ +|+.|+|++|++++..... ..... ......|| .+|+.+.. .|..
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~C~~ 231 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVKDGTGQ-NLHESPDGVTCSD 231 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHHHHHSGGGBCC--------CCGGGCBBTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCccccHHHHHHHHhcccceeeccCc-ccccCCCcCccCC
Confidence 88788888 8999999999999875433 22111 11223344 36776654 7764
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.5e-23 Score=229.23 Aligned_cols=205 Identities=19% Similarity=0.162 Sum_probs=132.4
Q ss_pred cccchhcccccccCCCCCCCC--CCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEE
Q 001867 333 PGLYELRLFRNRLNGTLPGDL--GKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRV 410 (1002)
Q Consensus 333 ~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 410 (1002)
++|++|++++|++.+..|..+ ..+++|++|+|++|++++..+..- ...+..+++|++|
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~--------------------~~~~~~~~~L~~L 150 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLA--------------------ELQQWLKPGLKVL 150 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHH--------------------HHHTTBCSCCCEE
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhH--------------------HHHhhhccCCCEE
Confidence 446666666666666666555 556666666666666654333100 0122345556666
Q ss_pred EccCccccCCCCCcCCCCCcceEEEcccCcccCc--c--ccccccCCcccEEEccCCcCCCCCcc----ccccccccccc
Q 001867 411 RLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGE--I--SKNIAGAANLSLLIISKNNLSGSLPE----EIGFLKSLVVL 482 (1002)
Q Consensus 411 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~--~--~~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L 482 (1002)
+|++|++++..|..|..+++|++|+|++|++.+. . +..+..+++|+.|+|++|+++ .+|. .++.+++|+.|
T Consensus 151 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L 229 (310)
T 4glp_A 151 SIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSL 229 (310)
T ss_dssp EEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSE
T ss_pred EeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEE
Confidence 6666666555555566666666666666665432 1 122356677777777777776 3333 24667888888
Q ss_pred cccccccCCCCccccccc---ccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcce
Q 001867 483 SGSENKFTGSLPESLTNL---AELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNN 559 (1002)
Q Consensus 483 ~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N 559 (1002)
+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|++++ +|. +..+++|+.|+|++|
T Consensus 230 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~-~~~-~~~l~~L~~L~L~~N 304 (310)
T 4glp_A 230 DLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR-APQ-PDELPEVDNLTLDGN 304 (310)
T ss_dssp ECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS-CCC-TTSCCCCSCEECSST
T ss_pred ECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC-Cch-hhhCCCccEEECcCC
Confidence 888888887767777666 58888888888888 5676664 788888888888885 344 677888888999988
Q ss_pred eeec
Q 001867 560 RLSG 563 (1002)
Q Consensus 560 ~l~~ 563 (1002)
+++.
T Consensus 305 ~l~~ 308 (310)
T 4glp_A 305 PFLV 308 (310)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8863
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.4e-23 Score=220.09 Aligned_cols=178 Identities=15% Similarity=0.187 Sum_probs=112.6
Q ss_pred CCCEEeccCCCCCCCCCCCccccCccccccccccc-ccCCCCccccccCCcccccccc-ccccCCCCcccccccccceee
Q 001867 94 NLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNL-LTGTLTPALADLPNLKFLDLTG-NNFSGDIPESFGRFQKLEVIS 171 (1002)
Q Consensus 94 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 171 (1002)
+|++|+|++|+++++.+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78889999988888777788888888888888886 8766666788888888888887 888866667788888888888
Q ss_pred eccccccCccccccccccccc---cccccCC-CCCCCCCCcccCCCCccc-hhhccCcccccccccccccccccchhccc
Q 001867 172 LVYNLLDGTIPAFLGNISTLK---MLNLSYN-PFLPGRIPPELGNLTNLE-ILWLTECNLVGEIPDSLGRLAKLVDLDLA 246 (1002)
Q Consensus 172 L~~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~~~~~~~p~~~~~l~~L~-~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 246 (1002)
+++|++++ +|. ++++++|+ +|++++| .+ ....+..|.++++|+ +|++++|+++...+..|.. ++|++|+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l-~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYM-TSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTC-CEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcch-hhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 88888875 444 66666665 6666666 43 112222345555555 5555555554222222222 444444444
Q ss_pred Ccc-cccccCcccccc-cceeeeeccCCccc
Q 001867 247 LNN-LVGAIPSSLTEL-ASVVQIELYNNSLT 275 (1002)
Q Consensus 247 ~N~-l~~~~~~~l~~l-~~L~~L~L~~N~l~ 275 (1002)
+|+ +++..+..|.++ ++|+.|++++|+++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 442 443333444444 44444444444444
No 341
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=5.2e-25 Score=248.31 Aligned_cols=254 Identities=20% Similarity=0.140 Sum_probs=207.6
Q ss_pred hcccccccCCCCCCCCCCCCCCceEEccCccccCCCC----hhhhccC-cccceeeeccccccCCCCcCcCC-----CCC
Q 001867 338 LRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIP----ASLCEKG-ELEELLMIYNSFTGQLPDGLGHC-----QSL 407 (1002)
Q Consensus 338 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~l~~l-----~~L 407 (1002)
+.+++|.+++.+|..+...++|++|||++|++++..+ ..+..++ +|++|++++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5688999999888888888889999999999998777 7778888 89999999999998888888775 999
Q ss_pred cEEEccCccccCCCCCcCC----CC-CcceEEEcccCcccCcccccccc-----CCcccEEEccCCcCCCCCccc----c
Q 001867 408 TRVRLGYNRLTGKVPPLLW----GL-PHVYLLELTDNFLSGEISKNIAG-----AANLSLLIISKNNLSGSLPEE----I 473 (1002)
Q Consensus 408 ~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~i~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~~p~~----~ 473 (1002)
++|+|++|++++..+..+. .+ ++|+.|+|++|.+++..+..+.. .++|+.|+|++|++++..+.. +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 9999999999987776443 34 89999999999999887766543 369999999999999654443 4
Q ss_pred cccc-ccccccccccccCCCCccccccc-----ccCCeeecCCCcCCcc----cccccccc-cccccccccCcccccCCC
Q 001867 474 GFLK-SLVVLSGSENKFTGSLPESLTNL-----AELGSLDLHANDLSGE----LPSSVSSW-KKLNELNLADNLFYGNIP 542 (1002)
Q Consensus 474 ~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l~~~ip 542 (1002)
..++ +|+.|+|++|++++..+..+... ++|++|||++|.+++. ++..+..+ ++|+.|+|++|.+++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 4555 99999999999998777655544 6999999999999973 55566654 599999999999986544
Q ss_pred ----CCccccccccEEeCcceeeeccc-------CCccccc-ccceEEeccccCcCCCChh
Q 001867 543 ----EDIGNLSVLNYLDLSNNRLSGRI-------PVGLQNL-KLNQLNVSNNRLSGELPSL 591 (1002)
Q Consensus 543 ----~~~~~l~~L~~L~Ls~N~l~~~i-------p~~~~~l-~L~~l~ls~N~l~g~~p~~ 591 (1002)
..+..+++|++|+|++|++++.. +..+..+ +|+.||+++|++.+..|..
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~ 303 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIP 303 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHH
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHH
Confidence 34567899999999999955433 3345556 6999999999998776644
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.9e-25 Score=254.44 Aligned_cols=236 Identities=25% Similarity=0.295 Sum_probs=171.7
Q ss_pred CCCCCCceEEccCccccCCCChh----hhccCcccceeeecc---ccccCCCCcC-------cCCCCCcEEEccCccccC
Q 001867 354 GKNSPLRWVDLSNNQFTGEIPAS----LCEKGELEELLMIYN---SFTGQLPDGL-------GHCQSLTRVRLGYNRLTG 419 (1002)
Q Consensus 354 ~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~l~~N---~l~~~~p~~l-------~~l~~L~~L~L~~N~l~~ 419 (1002)
..+++|+.|+|++|++++..+.. +..+++|++|++++| .+++.+|..+ ..+++|++|+|++|++++
T Consensus 29 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 108 (386)
T 2ca6_A 29 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 108 (386)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred hcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCH
Confidence 33444455555555544332222 334445555555543 2333334333 577888888888888876
Q ss_pred ----CCCCcCCCCCcceEEEcccCcccCcccccccc----C---------CcccEEEccCCcCC-CCCc---cccccccc
Q 001867 420 ----KVPPLLWGLPHVYLLELTDNFLSGEISKNIAG----A---------ANLSLLIISKNNLS-GSLP---EEIGFLKS 478 (1002)
Q Consensus 420 ----~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~----l---------~~L~~L~Ls~N~l~-~~~p---~~~~~l~~ 478 (1002)
.+|..+..+++|+.|+|++|.+....+..+.. + ++|+.|++++|+++ +.+| ..+..+++
T Consensus 109 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 188 (386)
T 2ca6_A 109 TAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL 188 (386)
T ss_dssp TTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCC
Confidence 35667777888888888888886544444433 3 88999999999987 4455 46678889
Q ss_pred cccccccccccC--C---CCcccccccccCCeeecCCCcCC----cccccccccccccccccccCcccccC----CCCCc
Q 001867 479 LVVLSGSENKFT--G---SLPESLTNLAELGSLDLHANDLS----GELPSSVSSWKKLNELNLADNLFYGN----IPEDI 545 (1002)
Q Consensus 479 L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----ip~~~ 545 (1002)
|+.|++++|+++ | ..|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. +|..+
T Consensus 189 L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l 268 (386)
T 2ca6_A 189 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAF 268 (386)
T ss_dssp CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHH
T ss_pred cCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHH
Confidence 999999999987 2 34447888999999999999996 67888899999999999999999865 56776
Q ss_pred --cccccccEEeCcceeeec----ccCCcc-ccc-ccceEEeccccCcCCCC
Q 001867 546 --GNLSVLNYLDLSNNRLSG----RIPVGL-QNL-KLNQLNVSNNRLSGELP 589 (1002)
Q Consensus 546 --~~l~~L~~L~Ls~N~l~~----~ip~~~-~~l-~L~~l~ls~N~l~g~~p 589 (1002)
+.+++|+.|+|++|++++ .+|..+ .++ +|+.|+|++|++++..|
T Consensus 269 ~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 269 SKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred hhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 448999999999999998 588877 556 79999999999998775
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=6.2e-23 Score=216.98 Aligned_cols=178 Identities=16% Similarity=0.176 Sum_probs=83.3
Q ss_pred CCceEEccCccccCCCChhhhccCcccceeeeccc-cccCCCCcCcCCCCCcEEEccC-ccccCCCCCcCCCCCcceEEE
Q 001867 358 PLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNS-FTGQLPDGLGHCQSLTRVRLGY-NRLTGKVPPLLWGLPHVYLLE 435 (1002)
Q Consensus 358 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 435 (1002)
+|++|++++|++++..+..|..+++|++|++++|. +++..+..|.++++|++|++++ |++++..+..|.++++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45556666665554444445445555555555553 4444444445555555555554 555444444444444444444
Q ss_pred cccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccc---ccccccc-ccCCCCcccccccccCC-eeecCC
Q 001867 436 LTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLV---VLSGSEN-KFTGSLPESLTNLAELG-SLDLHA 510 (1002)
Q Consensus 436 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~ 510 (1002)
+++|.+++ +|. ++.+++|+ .|++++| ++++..+..|..+++|+ .|++++
T Consensus 112 l~~n~l~~-------------------------lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 112 IFNTGLKM-------------------------FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEEECCCS-------------------------CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred CCCCCCcc-------------------------ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 44444443 332 33333333 4444444 44433333444445555 555555
Q ss_pred CcCCcccccccccccccccccccCcc-cccCCCCCcccc-ccccEEeCcceeee
Q 001867 511 NDLSGELPSSVSSWKKLNELNLADNL-FYGNIPEDIGNL-SVLNYLDLSNNRLS 562 (1002)
Q Consensus 511 N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~ip~~~~~l-~~L~~L~Ls~N~l~ 562 (1002)
|+++...+..|.. ++|+.|+|++|. +++..+..+.++ ++|+.|+|++|+++
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 5554222222333 455555555552 443333444555 55555555555555
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=9.9e-26 Score=256.84 Aligned_cols=240 Identities=23% Similarity=0.273 Sum_probs=169.6
Q ss_pred cccCCCcccchhcccccccCCC----CCCCCCCCCCCceEEccCc---cccCCCChhh-------hccCcccceeeeccc
Q 001867 327 ATIADSPGLYELRLFRNRLNGT----LPGDLGKNSPLRWVDLSNN---QFTGEIPASL-------CEKGELEELLMIYNS 392 (1002)
Q Consensus 327 ~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~l~~N~ 392 (1002)
..+..+++|++|+|++|+++.. ++..+..+++|++|+|++| ++++.+|..+ ..+++|++|++++|.
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3344444455555555554433 2223445566666666664 3334444444 456666666666666
Q ss_pred ccc----CCCCcCcCCCCCcEEEccCccccCCCCCcCCC----C---------CcceEEEcccCccc-Cccc---ccccc
Q 001867 393 FTG----QLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWG----L---------PHVYLLELTDNFLS-GEIS---KNIAG 451 (1002)
Q Consensus 393 l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~----l---------~~L~~L~L~~N~i~-~~~~---~~~~~ 451 (1002)
+++ .+|..+..+++|++|+|++|++++..+..+.. + ++|+.|+|++|+++ +..+ ..+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 665 35556667777777777777775433333332 2 77888888888876 2333 45667
Q ss_pred CCcccEEEccCCcCCC-----CCccccccccccccccccccccC----CCCcccccccccCCeeecCCCcCCcc----cc
Q 001867 452 AANLSLLIISKNNLSG-----SLPEEIGFLKSLVVLSGSENKFT----GSLPESLTNLAELGSLDLHANDLSGE----LP 518 (1002)
Q Consensus 452 l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p 518 (1002)
+++|+.|++++|+++. ..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.+++. +|
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 8899999999998872 34447888999999999999996 57888899999999999999999876 56
Q ss_pred cccc--cccccccccccCccccc----CCCCCc-cccccccEEeCcceeeecccC
Q 001867 519 SSVS--SWKKLNELNLADNLFYG----NIPEDI-GNLSVLNYLDLSNNRLSGRIP 566 (1002)
Q Consensus 519 ~~~~--~l~~L~~L~Ls~N~l~~----~ip~~~-~~l~~L~~L~Ls~N~l~~~ip 566 (1002)
..+. .+++|+.|+|++|.+++ .+|..+ .++++|++|+|++|++++..|
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 6764 38999999999999997 488888 678999999999999998765
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=4.1e-22 Score=223.33 Aligned_cols=223 Identities=15% Similarity=0.126 Sum_probs=153.8
Q ss_pred cccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCC-hhhhccCcccc-eeeeccccccCCCCcCcCCCCCcEE
Q 001867 333 PGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIP-ASLCEKGELEE-LLMIYNSFTGQLPDGLGHCQSLTRV 410 (1002)
Q Consensus 333 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~l~~N~l~~~~p~~l~~l~~L~~L 410 (1002)
+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+.+| ..|.+++++.+ +.+..|++++..|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 345666666666665555567777777777777777655444 34566666554 4555677777777777888888888
Q ss_pred EccCccccCCCCCcCCCCCcceEEEccc-CcccCccccccccCC-cccEEEccCCcCCCCCccccccccccccccccc-c
Q 001867 411 RLGYNRLTGKVPPLLWGLPHVYLLELTD-NFLSGEISKNIAGAA-NLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSE-N 487 (1002)
Q Consensus 411 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N 487 (1002)
++++|++++..+..+....++..|++.+ |.+..+.+..|..+. .++.|+|++|+|+ .+|.......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCC
Confidence 8888888776666676777777777754 566666666666654 5778888888887 4555555667788888874 5
Q ss_pred ccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCccee
Q 001867 488 KFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNR 560 (1002)
Q Consensus 488 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~ 560 (1002)
.++...+..|..+++|+.|||++|+|+...+..|.+|++|+.+++. .++ .+| .+.++++|+.++++++.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--CcC-cCC-CchhCcChhhCcCCCCc
Confidence 5663333567888888888888888886666667777777776653 343 566 47778888888887654
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=2.7e-22 Score=207.09 Aligned_cols=187 Identities=22% Similarity=0.289 Sum_probs=120.3
Q ss_pred CCCCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCC
Q 001867 54 DSPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTL 133 (1002)
Q Consensus 54 ~~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 133 (1002)
.+.|.|.+|.|+.. +++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 4 ~C~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (208)
T 2o6s_A 4 RCSCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLP 68 (208)
T ss_dssp TCEEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCEECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccC
Confidence 45689999999743 222 122222 246677777777776665566666777777777777777555
Q ss_pred CccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCC
Q 001867 134 TPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNL 213 (1002)
Q Consensus 134 ~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l 213 (1002)
+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++. +..+..+..+
T Consensus 69 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l 147 (208)
T 2o6s_A 69 NGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRL 147 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTC
T ss_pred hhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCHHHhccC
Confidence 555666777777777777777555555667777777777777777666666667777777777777652 2233346667
Q ss_pred CccchhhccCcccccccccccccccccchhcccCcccccccCcccccccc
Q 001867 214 TNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELAS 263 (1002)
Q Consensus 214 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 263 (1002)
++|++|++++|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 148 ~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 148 TSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 777777777776553 2346677777777777777766665543
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=3.4e-24 Score=239.37 Aligned_cols=229 Identities=17% Similarity=0.182 Sum_probs=146.2
Q ss_pred cccchhcccccccCCCCCCCCCCCCCCceEEccCccccCC-CChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEE
Q 001867 333 PGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGE-IPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVR 411 (1002)
Q Consensus 333 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 411 (1002)
++++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++..+..
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~----------- 137 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNT----------- 137 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHH-----------
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHH-----------
Confidence 4555556666666554443 34566777777777776644 4444544444444444444444444444
Q ss_pred ccCccccCCCCCcCCCCCcceEEEcccC-cccCc-cccccccCCcccEEEccCC-cCCCC-Ccccccccc-ccccccccc
Q 001867 412 LGYNRLTGKVPPLLWGLPHVYLLELTDN-FLSGE-ISKNIAGAANLSLLIISKN-NLSGS-LPEEIGFLK-SLVVLSGSE 486 (1002)
Q Consensus 412 L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~i~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~Ls~ 486 (1002)
+..+++|+.|++++| .+++. .+..+..+++|+.|++++| .+++. ++..+..++ +|+.|++++
T Consensus 138 -------------l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 138 -------------LAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp -------------HTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred -------------HhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 444444444444444 34332 3444556666777777777 66643 456667777 777777777
Q ss_pred c--ccC-CCCcccccccccCCeeecCCCc-CCcccccccccccccccccccCcc-cccCCCCCccccccccEEeCcceee
Q 001867 487 N--KFT-GSLPESLTNLAELGSLDLHAND-LSGELPSSVSSWKKLNELNLADNL-FYGNIPEDIGNLSVLNYLDLSNNRL 561 (1002)
Q Consensus 487 N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~ip~~~~~l~~L~~L~Ls~N~l 561 (1002)
| .++ +.+|..+..+++|+.|+|++|. +++..+..+..+++|+.|+|++|. ++......++++++|+.|+|++|
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-- 282 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-- 282 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS--
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc--
Confidence 7 444 3456677778888888888888 777777788888888888888885 32222225778888999999888
Q ss_pred ecccCC-ccccc--ccceEEeccccCcCCCChh
Q 001867 562 SGRIPV-GLQNL--KLNQLNVSNNRLSGELPSL 591 (1002)
Q Consensus 562 ~~~ip~-~~~~l--~L~~l~ls~N~l~g~~p~~ 591 (1002)
++. .+..+ .+..|++++|+++|..|..
T Consensus 283 ---i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 283 ---VPDGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp ---SCTTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred ---cCHHHHHHHHhhCcceEEecccCccccCCc
Confidence 333 45555 4888889999999888864
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3.5e-22 Score=219.41 Aligned_cols=192 Identities=23% Similarity=0.301 Sum_probs=134.9
Q ss_pred CcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEE
Q 001867 332 SPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVR 411 (1002)
Q Consensus 332 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 411 (1002)
+++|++|++++|.+.. ++ .+..+++|++|+|++|++++..+ +..+++|++|++++|.+++. ..+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 4455555555555543 22 35556666666666666664333 66666666666666666642 2567777788888
Q ss_pred ccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCC
Q 001867 412 LGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTG 491 (1002)
Q Consensus 412 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 491 (1002)
|++|++++.. .+..+++|+.|++++|.+++..+ +..+++|+.|++++|++++. +. ++.+++|+.|++++|++++
T Consensus 114 l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCc
Confidence 8888877543 27777888888888888876554 77788888888888888753 33 7788888888888888885
Q ss_pred CCcccccccccCCeeecCCCcCCcccccccccccccccccccCccccc
Q 001867 492 SLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYG 539 (1002)
Q Consensus 492 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 539 (1002)
..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|.+++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 433 7888888888888888886653 7888888888888888874
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=6.1e-22 Score=221.94 Aligned_cols=222 Identities=20% Similarity=0.214 Sum_probs=148.2
Q ss_pred CCCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCC
Q 001867 55 SPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLT 134 (1002)
Q Consensus 55 ~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 134 (1002)
+-|.|+.|.|+ +++++ .+|..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+.+|
T Consensus 7 C~C~~~~v~C~------------~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 7 CHCSNRVFLCQ------------ESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp SEEETTEEEEE------------STTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred cEeeCCEEEec------------CCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 33677777775 34555 345544 2589999999999997777789999999999999999876555
Q ss_pred -ccccccCCccc-cccccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCC
Q 001867 135 -PALADLPNLKF-LDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGN 212 (1002)
Q Consensus 135 -~~~~~L~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~ 212 (1002)
.+|.++++|++ +.+++|+++...|+.|..+++|++|++++|++++..+..+....++..|++.++.-+....+..|..
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 46888888775 6677789998888889999999999999999987777777777777788776543222222233444
Q ss_pred CC-ccchhhccCcccccccccccccccccchhcccC-cccccccCcccccccceeeeeccCCcccCCCCCccccccccce
Q 001867 213 LT-NLEILWLTECNLVGEIPDSLGRLAKLVDLDLAL-NNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRL 290 (1002)
Q Consensus 213 l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 290 (1002)
+. .++.|+|++|+|+. +|.......+|++|++++ |.++...+.+|.++++|+.|+|++|+++...+..|.++++|+.
T Consensus 152 ~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~ 230 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRA 230 (350)
T ss_dssp SBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEEC
T ss_pred cchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhh
Confidence 43 46666666666663 333333445666666653 4454444445566666666666666666444444444444444
Q ss_pred ee
Q 001867 291 LD 292 (1002)
Q Consensus 291 L~ 292 (1002)
++
T Consensus 231 l~ 232 (350)
T 4ay9_X 231 RS 232 (350)
T ss_dssp TT
T ss_pred cc
Confidence 33
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=2.6e-21 Score=199.74 Aligned_cols=162 Identities=20% Similarity=0.138 Sum_probs=89.9
Q ss_pred cccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEcc
Q 001867 382 ELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIIS 461 (1002)
Q Consensus 382 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 461 (1002)
+|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|+.|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44444444444444444445555556666666666555444445555555555555555555444445555556666666
Q ss_pred CCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCC
Q 001867 462 KNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNI 541 (1002)
Q Consensus 462 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i 541 (1002)
+|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|+|++|.+.+. +++|+.|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCcee
Confidence 6665544444455566666666666666644444455666666666666655432 335566666666666666
Q ss_pred CCCcccccc
Q 001867 542 PEDIGNLSV 550 (1002)
Q Consensus 542 p~~~~~l~~ 550 (1002)
|++++.++.
T Consensus 182 p~~~~~l~~ 190 (208)
T 2o6s_A 182 RNSAGSVAP 190 (208)
T ss_dssp BCTTSSBCT
T ss_pred eccCccccC
Confidence 666555543
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=4.9e-22 Score=214.57 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=119.4
Q ss_pred CCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCcccc--ccccchhhHHhHHHHHHHHhcCCCCceeee
Q 001867 684 GLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEK--GQVQDQVQDDGFQAEVETLGKIRHKNIVKL 761 (1002)
Q Consensus 684 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 761 (1002)
.|.+.+.||+|+||.||+|...+|+.||+|++....... ........ ...........+.+|+.++++++ | +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~-~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSF-KKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC-------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCch-hhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 455679999999999999999779999999985431110 00000000 00000124667999999999998 5 666
Q ss_pred eeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeE
Q 001867 762 WCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGAR 841 (1002)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~k 841 (1002)
++++.. +..|+||||++||+|.+ +.. .....++.|++.||+|||++ +|+||||||+||+++ ++.+|
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vk 232 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIW 232 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEE
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEE
Confidence 665544 55699999999999988 431 23457999999999999999 999999999999999 99999
Q ss_pred EccccCcccccCCCCCcccccccccccccCcccccc
Q 001867 842 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYT 877 (1002)
Q Consensus 842 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 877 (1002)
|+|||+|+. +..|+|||++.+
T Consensus 233 l~DFG~a~~---------------~~~~~a~e~l~r 253 (282)
T 1zar_A 233 IIDFPQSVE---------------VGEEGWREILER 253 (282)
T ss_dssp ECCCTTCEE---------------TTSTTHHHHHHH
T ss_pred EEECCCCeE---------------CCCCCHHHHHHH
Confidence 999999863 335789998653
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3e-21 Score=227.25 Aligned_cols=166 Identities=32% Similarity=0.368 Sum_probs=107.7
Q ss_pred cccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEcc
Q 001867 382 ELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIIS 461 (1002)
Q Consensus 382 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 461 (1002)
+|++|++++|.++ .+| ..+++|++|+|++|+|++ +|. +.. +|+.|+|++|.|++ +|. .+++|+.|+|+
T Consensus 81 ~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 148 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINAD 148 (571)
T ss_dssp TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCC
Confidence 3444444444444 233 234566666666666664 444 433 56666666666665 232 45667777777
Q ss_pred CCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCccccccccccccc-------ccccccC
Q 001867 462 KNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKL-------NELNLAD 534 (1002)
Q Consensus 462 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~ 534 (1002)
+|++++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRE 216 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCS
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCC
Confidence 777764 554 46677777777777775 565 55 77788888888877 4555 544 56 8888888
Q ss_pred cccccCCCCCccccccccEEeCcceeeecccCCccccc
Q 001867 535 NLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL 572 (1002)
Q Consensus 535 N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l 572 (1002)
|.|+ .+|..++.+++|+.|+|++|+|++.+|..+..+
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 8887 688888888888888888888888888777665
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=4.5e-21 Score=225.74 Aligned_cols=188 Identities=25% Similarity=0.359 Sum_probs=103.0
Q ss_pred cceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeec
Q 001867 311 LESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIY 390 (1002)
Q Consensus 311 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 390 (1002)
++.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +
T Consensus 61 L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l------------- 118 (571)
T 3cvr_A 61 FSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-L------------- 118 (571)
T ss_dssp CSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-C-------------
T ss_pred ccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-h-------------
Confidence 5666666666664 443332 45555555555555 233 234555555555555553 333 3
Q ss_pred cccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCc
Q 001867 391 NSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLP 470 (1002)
Q Consensus 391 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 470 (1002)
.. +|++|+|++|+|++ +|. .+++|+.|+|++|.|+++ |. .+++|+.|+|++|++++ +|
T Consensus 119 -----------~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~-lp 176 (571)
T 3cvr_A 119 -----------PA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTF-LP 176 (571)
T ss_dssp -----------CT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC
T ss_pred -----------hc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCC-cc
Confidence 32 45555555555554 333 345555555555555542 22 34556666666666654 44
Q ss_pred cccccccccccccccccccCCCCcccccccccC-------CeeecCCCcCCcccccccccccccccccccCcccccCCCC
Q 001867 471 EEIGFLKSLVVLSGSENKFTGSLPESLTNLAEL-------GSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPE 543 (1002)
Q Consensus 471 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~ 543 (1002)
. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|.
T Consensus 177 ~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 177 E-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp C-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred h-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 4 44 56666666666666 4454 433 45 67777777776 4566666677777777777777776776
Q ss_pred Ccccccc
Q 001867 544 DIGNLSV 550 (1002)
Q Consensus 544 ~~~~l~~ 550 (1002)
.++.+..
T Consensus 249 ~l~~l~~ 255 (571)
T 3cvr_A 249 SLSQQTA 255 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 6666544
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=8.2e-21 Score=232.21 Aligned_cols=228 Identities=21% Similarity=0.194 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHHhccC-CccccCCCCCCCCCCCCCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccC
Q 001867 24 NQEGLYLERVKLSLSD-PDSALSSWGRNPRDDSPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFN 102 (1002)
Q Consensus 24 ~~~~~~l~~~k~~~~d-~~~~l~sw~~~~~~~~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~ 102 (1002)
..++.+|+++..+... ....-..|.. ....++.|.++.++. .+++.|+|.++++... +..+ |+.++|+.
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~ 200 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTG--DSTPSGTATNSAVST--PLTPKIELFANGKDEA-NQAL-----LQHKKLSQ 200 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcC--CCCccccCCCceecC--CccceEEeeCCCCCcc-hhhH-----hhcCccCc
Confidence 4567788888877632 2233445643 223467899998875 5699999999998864 3332 33444444
Q ss_pred CCCCC---------CCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeec
Q 001867 103 NSINS---------TLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLV 173 (1002)
Q Consensus 103 n~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 173 (1002)
|.|.+ ..|..|..+++|++|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|+++++|++|+|+
T Consensus 201 ~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls 278 (727)
T 4b8c_D 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLS 278 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECT
T ss_pred ccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCc
Confidence 44432 45778888999999999999998 67777778999999999999998 788889999999999999
Q ss_pred cccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccc-cchhcccCccccc
Q 001867 174 YNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAK-LVDLDLALNNLVG 252 (1002)
Q Consensus 174 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~ 252 (1002)
+|+|+ .+|..|++|++|++|+|++|.+ ..+|..|+++++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++
T Consensus 279 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l--~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 279 HNRLT-SLPAELGSCFQLKYFYFFDNMV--TTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp TSCCS-SCCSSGGGGTTCSEEECCSSCC--CCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCcCC-ccChhhcCCCCCCEEECCCCCC--CccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 99998 6788899999999999999987 478888999999999999999999888888876533 3457888888888
Q ss_pred ccCcccccccceeeeeccCC
Q 001867 253 AIPSSLTELASVVQIELYNN 272 (1002)
Q Consensus 253 ~~~~~l~~l~~L~~L~L~~N 272 (1002)
.+|..+ ..|+++.|
T Consensus 356 ~~p~~l------~~l~l~~n 369 (727)
T 4b8c_D 356 PLPHER------RFIEINTD 369 (727)
T ss_dssp CCCCC---------------
T ss_pred cCcccc------ceeEeecc
Confidence 777644 44556555
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.4e-19 Score=196.73 Aligned_cols=151 Identities=25% Similarity=0.324 Sum_probs=100.5
Q ss_pred CcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccc
Q 001867 401 LGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLV 480 (1002)
Q Consensus 401 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 480 (1002)
+..+++|++|+|++|++++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++ + +.++.+++|+
T Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~ 137 (291)
T 1h6t_A 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLE 137 (291)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCC
T ss_pred HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCC
Confidence 4555566666666666654433 55566666666666666542 236666677777777777764 2 3566677777
Q ss_pred cccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCccee
Q 001867 481 VLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNR 560 (1002)
Q Consensus 481 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~ 560 (1002)
.|++++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|+
T Consensus 138 ~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 138 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEE
T ss_pred EEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCc
Confidence 777777777743 467777777777777777776555 7777777777777777773 44 37777778888888887
Q ss_pred eec
Q 001867 561 LSG 563 (1002)
Q Consensus 561 l~~ 563 (1002)
++.
T Consensus 212 i~~ 214 (291)
T 1h6t_A 212 CLN 214 (291)
T ss_dssp EEC
T ss_pred ccC
Confidence 774
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=8.2e-20 Score=217.65 Aligned_cols=196 Identities=19% Similarity=0.206 Sum_probs=120.6
Q ss_pred cceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeec
Q 001867 311 LESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIY 390 (1002)
Q Consensus 311 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 390 (1002)
+..+.+..+.+....+ +..+++|+.|++++|.+... + .+..+++|+.|+|++|+|++..| +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4556666666664433 45567777777777777643 2 46777777777777777775444 66667777777777
Q ss_pred cccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCc
Q 001867 391 NSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLP 470 (1002)
Q Consensus 391 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 470 (1002)
|.+++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++++..|
T Consensus 97 N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 77664 2 2566666777777777766642 3355666666666666666654 445566666666666666664444
Q ss_pred cccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccc
Q 001867 471 EEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVS 522 (1002)
Q Consensus 471 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 522 (1002)
++.+++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++.....+.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred --hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCcCcCCcccccc
Confidence 5566666666666666653 22 455666666666666666544333333
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=9.3e-20 Score=189.45 Aligned_cols=153 Identities=18% Similarity=0.144 Sum_probs=83.8
Q ss_pred cEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccc-cccccCCcccEEEccCCcCCCCCccccccccccccccccc
Q 001867 408 TRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEIS-KNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSE 486 (1002)
Q Consensus 408 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 486 (1002)
+.+++++|.++. +|..+. +.++.|+|++|.|++..+ ..|..+++|+.|+|++|++++..+..|+.+++|+.|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 578888888874 454432 234566666666665533 3355555555555555555544444555555555555555
Q ss_pred cccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeec
Q 001867 487 NKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 487 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
|++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 55554444445555555555555555555555555555555555555555554445555555555555555555543
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=5.4e-22 Score=235.16 Aligned_cols=203 Identities=21% Similarity=0.177 Sum_probs=152.3
Q ss_pred CCCCCCceEEccCccccCCCChhhhccCcccceeeeccc-------------cccCCCCcCcCCCCCcEEE-ccCccccC
Q 001867 354 GKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNS-------------FTGQLPDGLGHCQSLTRVR-LGYNRLTG 419 (1002)
Q Consensus 354 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-------------l~~~~p~~l~~l~~L~~L~-L~~N~l~~ 419 (1002)
...++|+.|+|++|+++ .+|..+..+++|+.|++++|. +.+..|..++++++|+.|+ ++.|++.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45677888888888887 778888888888888886664 4556666677777777777 6666542
Q ss_pred CCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccc
Q 001867 420 KVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTN 499 (1002)
Q Consensus 420 ~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 499 (1002)
+|..+.+++|.|....+ ..|+.|+|++|++++ +|. ++.+++|+.|+|++|+|+ .+|..|+.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 45556666777664432 247888888888885 666 888888888888888888 77888888
Q ss_pred cccCCeeecCCCcCCcccccccccccccccccccCcccccCC-CCCccccccccEEeCcceeeecccCCccc---cc-cc
Q 001867 500 LAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNI-PEDIGNLSVLNYLDLSNNRLSGRIPVGLQ---NL-KL 574 (1002)
Q Consensus 500 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i-p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~---~l-~L 574 (1002)
+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..++.+++|+.|+|++|+|++.+|.... .+ +|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 8888888888888886 56 7888888888888888888766 88888888888888888888876654321 23 56
Q ss_pred ceEEe
Q 001867 575 NQLNV 579 (1002)
Q Consensus 575 ~~l~l 579 (1002)
+.||+
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 66653
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2.5e-19 Score=186.20 Aligned_cols=156 Identities=19% Similarity=0.170 Sum_probs=120.0
Q ss_pred eEEEcccCcccCccccccccCCcccEEEccCCcCCCCCc-cccccccccccccccccccCCCCcccccccccCCeeecCC
Q 001867 432 YLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLP-EEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHA 510 (1002)
Q Consensus 432 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 510 (1002)
+.+++++|.++. +|..+. ..++.|+|++|++++..| ..|+.+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 467888888775 344442 346788888888876544 3577888888888888888876666788888888888888
Q ss_pred CcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCC
Q 001867 511 NDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELP 589 (1002)
Q Consensus 511 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p 589 (1002)
|++++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..|..+..+ +|+.|+|++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887777778888888888888888887777888888888888888888887777777777 68888888888877665
Q ss_pred h
Q 001867 590 S 590 (1002)
Q Consensus 590 ~ 590 (1002)
-
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.6e-19 Score=213.35 Aligned_cols=159 Identities=25% Similarity=0.303 Sum_probs=105.9
Q ss_pred CcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccc
Q 001867 401 LGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLV 480 (1002)
Q Consensus 401 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 480 (1002)
+..+++|+.|+|++|++++..| +..+++|+.|+|++|.|.+. ..+..+++|+.|+|++|++++ + +.++.+++|+
T Consensus 61 l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~ 134 (605)
T 1m9s_A 61 IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLE 134 (605)
T ss_dssp GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCS
T ss_pred HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCC-C-ccccCCCccC
Confidence 4555555666666665554433 55556666666666665542 246666667777777777764 2 3466777777
Q ss_pred cccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCccee
Q 001867 481 VLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNR 560 (1002)
Q Consensus 481 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~ 560 (1002)
.|+|++|++++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|+
T Consensus 135 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 135 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp EEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEE
T ss_pred EEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCc
Confidence 777777777753 567777888888888888877666 7777888888888888874 33 57778888888888888
Q ss_pred eecccCCcccc
Q 001867 561 LSGRIPVGLQN 571 (1002)
Q Consensus 561 l~~~ip~~~~~ 571 (1002)
+++.....+..
T Consensus 209 l~~~p~~~~~~ 219 (605)
T 1m9s_A 209 CLNKPINHQSN 219 (605)
T ss_dssp EECCCCCCCSS
T ss_pred CcCCccccccc
Confidence 87644433333
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=4.7e-19 Score=184.11 Aligned_cols=153 Identities=22% Similarity=0.169 Sum_probs=100.9
Q ss_pred cEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccccccccccccc
Q 001867 408 TRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSEN 487 (1002)
Q Consensus 408 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 487 (1002)
+.+++++|.++ .+|..+. ++|+.|+|++|.|+++.+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46667777766 3444332 45666666666666666656666666666666666666655666666667777777777
Q ss_pred ccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCcceeeec
Q 001867 488 KFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 488 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.|++..+..+..+++|+.|+|++|++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 7764444456667777777777777776666677777777777777777775555566677777777777776653
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=3.3e-19 Score=186.65 Aligned_cols=161 Identities=24% Similarity=0.292 Sum_probs=135.9
Q ss_pred CCCCCccceeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCC
Q 001867 53 DDSPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGT 132 (1002)
Q Consensus 53 ~~~~C~w~gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 132 (1002)
+.+.|+|.+|.|+.. +++ .+|..+. ++|++|+|++|+|+++.|..|..+++|++|+|++|+|+..
T Consensus 15 ~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp TTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 467899999999643 333 3444333 7899999999999998899999999999999999999877
Q ss_pred CCccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCC
Q 001867 133 LTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGN 212 (1002)
Q Consensus 133 ~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~ 212 (1002)
.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|++. ...+..+..
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~ 157 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDR 157 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-CCCTTTTTT
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-ccCHHHHhC
Confidence 7777899999999999999999877788899999999999999999 77888899999999999999873 333456889
Q ss_pred CCccchhhccCccccccc
Q 001867 213 LTNLEILWLTECNLVGEI 230 (1002)
Q Consensus 213 l~~L~~L~L~~n~l~~~~ 230 (1002)
+++|+.|+|++|.+....
T Consensus 158 l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CTTCCEEECTTSCBCTTB
T ss_pred CCCCCEEEeeCCCccCCc
Confidence 999999999999988543
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.2e-21 Score=229.84 Aligned_cols=175 Identities=20% Similarity=0.156 Sum_probs=103.0
Q ss_pred ccCcccccccccccccCCCCccccccCCcccccccccc-------------ccCCCCcccccccccceee-eccc-----
Q 001867 115 ACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNN-------------FSGDIPESFGRFQKLEVIS-LVYN----- 175 (1002)
Q Consensus 115 ~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N----- 175 (1002)
.+++|+.|+|++|+|+ .+|..+++|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L 425 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDL 425 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchh
Confidence 3455555555555555 445555555555555554443 3444555555555555555 4444
Q ss_pred --------cccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccccchhcccC
Q 001867 176 --------LLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLAL 247 (1002)
Q Consensus 176 --------~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 247 (1002)
.++...+ ..|+.|+|++|.+. .+|. ++++++|+.|+|++|+|+ .+|..|+.+++|++|+|++
T Consensus 426 ~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~--~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 495 (567)
T 1dce_A 426 RSKFLLENSVLKMEY------ADVRVLHLAHKDLT--VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASD 495 (567)
T ss_dssp HHHHHHHHHHHHHHH------TTCSEEECTTSCCS--SCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred hhhhhhcccccccCc------cCceEEEecCCCCC--CCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCC
Confidence 3332211 13666677766652 3554 666666666666666666 5566666666666666666
Q ss_pred cccccccCcccccccceeeeeccCCcccCCC-CCccccccccceeeccccccCCCC
Q 001867 248 NNLVGAIPSSLTELASVVQIELYNNSLTGDL-PTGWSNLTSLRLLDASMNDLTGPI 302 (1002)
Q Consensus 248 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~ 302 (1002)
|+|++ +| .+.++++|+.|+|++|++++.. |..+..+++|+.|+|++|++++.+
T Consensus 496 N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 496 NALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp SCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 66665 34 5666666666666666666555 666666666666666666666443
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=2.1e-19 Score=195.47 Aligned_cols=172 Identities=20% Similarity=0.250 Sum_probs=129.0
Q ss_pred CCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceE
Q 001867 354 GKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYL 433 (1002)
Q Consensus 354 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 433 (1002)
..+++|+.|++++|.++.. + .+..+++|++|++++|.+++..+ +.++++|++|+|++|++++ +| .+..+++|+.
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 3455566666666666633 2 35666666666666666665444 6777777777777777765 22 3777788888
Q ss_pred EEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcC
Q 001867 434 LELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDL 513 (1002)
Q Consensus 434 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 513 (1002)
|++++|.+++. ..+..+++|+.|++++|++++. ..++.+++|+.|++++|++++..| +..+++|+.|+|++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 88888887764 4577888888888888888854 578888999999999999986544 88899999999999999
Q ss_pred CcccccccccccccccccccCccccc
Q 001867 514 SGELPSSVSSWKKLNELNLADNLFYG 539 (1002)
Q Consensus 514 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ 539 (1002)
++. | .+..+++|+.|+|++|.++.
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-h-hhccCCCCCEEECcCCcccC
Confidence 864 4 48889999999999999885
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.4e-19 Score=199.50 Aligned_cols=162 Identities=19% Similarity=0.153 Sum_probs=68.9
Q ss_pred eEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCc-CCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccC
Q 001867 361 WVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLG-HCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDN 439 (1002)
Q Consensus 361 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 439 (1002)
.+++++|+++ .+|..+. ..++.|+|++|.+++..+..+. ++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 4445555444 2333221 1233344444444433333343 4444444444444444444444444444444444444
Q ss_pred cccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccc---cccccCCeeecCCCcCCcc
Q 001867 440 FLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESL---TNLAELGSLDLHANDLSGE 516 (1002)
Q Consensus 440 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~ 516 (1002)
+|+...+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 4444444444444444444444444443334444444444444444444442222222 3344444444444444443
Q ss_pred ccccccccc
Q 001867 517 LPSSVSSWK 525 (1002)
Q Consensus 517 ~p~~~~~l~ 525 (1002)
.+..+..++
T Consensus 179 ~~~~~~~l~ 187 (361)
T 2xot_A 179 PLTDLQKLP 187 (361)
T ss_dssp CHHHHHHSC
T ss_pred CHHHhhhcc
Confidence 333444443
No 366
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.1e-19 Score=222.33 Aligned_cols=161 Identities=23% Similarity=0.247 Sum_probs=117.8
Q ss_pred eeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCC
Q 001867 388 MIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSG 467 (1002)
Q Consensus 388 l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 467 (1002)
+..|.+. ..|..+..+++|+.|+|++|++. .+|..++.+++|+.|+|++|.|+ .+|..|..+++|+.|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3445444 56777888888899999999888 56666778888888899888888 67788888999999999999998
Q ss_pred CCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccc-cccccccCcccccCCCCCcc
Q 001867 468 SLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKK-LNELNLADNLFYGNIPEDIG 546 (1002)
Q Consensus 468 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~ip~~~~ 546 (1002)
.+|..|+.+++|+.|+|++|.|+ .+|..|+.|++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~-- 360 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE-- 360 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc--
Confidence 77888999999999999999997 77888999999999999999999998988876543 345889999999888864
Q ss_pred ccccccEEeCcce
Q 001867 547 NLSVLNYLDLSNN 559 (1002)
Q Consensus 547 ~l~~L~~L~Ls~N 559 (1002)
|+.|++++|
T Consensus 361 ----l~~l~l~~n 369 (727)
T 4b8c_D 361 ----RRFIEINTD 369 (727)
T ss_dssp -------------
T ss_pred ----cceeEeecc
Confidence 455667766
No 367
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=2.9e-19 Score=200.96 Aligned_cols=173 Identities=28% Similarity=0.245 Sum_probs=93.4
Q ss_pred EEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccc-cCCcccEEEccCCcCCCCCcccccccccccccccccc
Q 001867 409 RVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIA-GAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSEN 487 (1002)
Q Consensus 409 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 487 (1002)
.+++++|+++. +|..+. +.++.|+|++|.|++..+..+. .+++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 44445554442 333221 2344555555555544444444 5555555555555555444455555555666666666
Q ss_pred ccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCC-c---cccccccEEeCcceeeec
Q 001867 488 KFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPED-I---GNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 488 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~-~---~~l~~L~~L~Ls~N~l~~ 563 (1002)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++ +|.. + ..+++|+.|||++|+|++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 6554444455666666666666666665556666666666666666666663 3333 2 456666666666666664
Q ss_pred ccCCccccc-c--cceEEeccccCc
Q 001867 564 RIPVGLQNL-K--LNQLNVSNNRLS 585 (1002)
Q Consensus 564 ~ip~~~~~l-~--L~~l~ls~N~l~ 585 (1002)
..+..+..+ . ++.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 333444444 2 456666666665
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=2.4e-18 Score=180.01 Aligned_cols=135 Identities=23% Similarity=0.239 Sum_probs=70.9
Q ss_pred cccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCccccccccccccccccccc
Q 001867 454 NLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLA 533 (1002)
Q Consensus 454 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 533 (1002)
+|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls 120 (229)
T 3e6j_A 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMC 120 (229)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEecc
Confidence 34444444444444444444444555555555555543333444555555555555555555444555555555555555
Q ss_pred CcccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCC
Q 001867 534 DNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELP 589 (1002)
Q Consensus 534 ~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p 589 (1002)
+|+|+ .+|..+..+++|++|+|++|+|++..+..+..+ +|+.|+|++|++.+..+
T Consensus 121 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 121 CNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 55555 555555555556666666665554444445555 55566666666555443
No 369
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=2.1e-18 Score=179.14 Aligned_cols=132 Identities=22% Similarity=0.252 Sum_probs=65.0
Q ss_pred CcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccc
Q 001867 407 LTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSE 486 (1002)
Q Consensus 407 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 486 (1002)
|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++.+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++
T Consensus 34 l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 113 (220)
T 2v9t_B 34 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA 113 (220)
T ss_dssp CCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCC
Confidence 34444444444433333444444444444444444444444444444444444444444433333344555555555555
Q ss_pred cccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccc
Q 001867 487 NKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFY 538 (1002)
Q Consensus 487 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 538 (1002)
|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 114 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 114 NKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 5555544555555555555555555555555555555555555555555554
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=6.8e-19 Score=188.27 Aligned_cols=170 Identities=22% Similarity=0.239 Sum_probs=97.6
Q ss_pred CcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEE
Q 001867 332 SPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVR 411 (1002)
Q Consensus 332 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 411 (1002)
+.++..+++++|.+++.. .+..+++|+.|++++|+++ .++ .+..+++|++|++++|.+++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 455666667666666433 4566667777777777776 333 45666666666666666665433 66666666666
Q ss_pred ccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCC
Q 001867 412 LGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTG 491 (1002)
Q Consensus 412 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 491 (1002)
|++|++++. |.... ++|+.|+|++|++++. ..+..+++|+.|++++|++++. | .++.+++|+.|++++|++++
T Consensus 92 L~~N~l~~l-~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNL-NGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCC-TTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCc-Ccccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 666666642 22222 5566666666666543 2355555566666666655532 2 45555555555555555554
Q ss_pred CCcccccccccCCeeecCCCcCCcc
Q 001867 492 SLPESLTNLAELGSLDLHANDLSGE 516 (1002)
Q Consensus 492 ~~p~~~~~l~~L~~L~Ls~N~l~~~ 516 (1002)
. ..+..+++|+.|++++|++++.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 3 4455555555555555555544
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=2e-18 Score=175.19 Aligned_cols=153 Identities=22% Similarity=0.313 Sum_probs=86.3
Q ss_pred cEEEccCCcCCCCCccccccccccccccccccccCCCCcc-cccccccCCeeecCCCcCCcccccccccccccccccccC
Q 001867 456 SLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPE-SLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLAD 534 (1002)
Q Consensus 456 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 534 (1002)
+.+++++|+++ .+|..+.. +|+.|++++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34555555554 44544332 556666666666543332 355666666666666666666566666666666666666
Q ss_pred cccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCChhhh-hhcccccccCCCCCCCCC
Q 001867 535 NLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPSLFA-KEMYRNSFLGNPGLCGDL 611 (1002)
Q Consensus 535 N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~~~~-~~~~~~~~~~n~~~cg~~ 611 (1002)
|+|++..|..|+++++|++|+|++|++++.+|..+..+ +|+.|+|++|++++..+-..+ ..+....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 66665555556666666666666666666666666555 566666666666665553222 112223444555556554
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=9.1e-19 Score=187.28 Aligned_cols=170 Identities=18% Similarity=0.175 Sum_probs=118.8
Q ss_pred cCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEE
Q 001867 380 KGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLI 459 (1002)
Q Consensus 380 l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 459 (1002)
+.++..+++++|.+++.. .+..+++|++|++++|+++. +| .+..+++|+.|+|++|+|++..+ +..+++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 445566666666665432 45667777777777777763 33 46667777777777777766554 67777777777
Q ss_pred ccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCccccc
Q 001867 460 ISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYG 539 (1002)
Q Consensus 460 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 539 (1002)
+++|++++ +|.... ++|+.|++++|++++ ++ .+..+++|+.|+|++|++++. | .++.+++|+.|+|++|.+++
T Consensus 92 L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 77777774 343222 777888888887774 33 577788888888888888764 3 57778888888888888875
Q ss_pred CCCCCccccccccEEeCcceeeecc
Q 001867 540 NIPEDIGNLSVLNYLDLSNNRLSGR 564 (1002)
Q Consensus 540 ~ip~~~~~l~~L~~L~Ls~N~l~~~ 564 (1002)
. ..+..+++|+.|+|++|++++.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 4 6677888888888888888754
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=2e-18 Score=176.18 Aligned_cols=153 Identities=20% Similarity=0.233 Sum_probs=84.3
Q ss_pred cCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccccccc
Q 001867 402 GHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVV 481 (1002)
Q Consensus 402 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 481 (1002)
..+++|+.|++++|+++ .+| .+..+++|+.|++++|.+.. +..+..+++|+.|++++|++++..|..++.+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556666666666665 333 35555555555555554432 224555556666666666665545555555666666
Q ss_pred ccccccccCCCCcccccccccCCeeecCCCc-CCcccccccccccccccccccCcccccCCCCCccccccccEEeCccee
Q 001867 482 LSGSENKFTGSLPESLTNLAELGSLDLHAND-LSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNR 560 (1002)
Q Consensus 482 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~ 560 (1002)
|++++|++++..|..+..+++|+.|+|++|+ ++ .+| .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 6666666655555555566666666666665 33 333 45555666666666666553 33 55556666666666665
Q ss_pred ee
Q 001867 561 LS 562 (1002)
Q Consensus 561 l~ 562 (1002)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 54
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=8.4e-18 Score=170.67 Aligned_cols=113 Identities=24% Similarity=0.321 Sum_probs=91.0
Q ss_pred cccEEEccCCcCCCCCcc-ccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccc
Q 001867 454 NLSLLIISKNNLSGSLPE-EIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNL 532 (1002)
Q Consensus 454 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 532 (1002)
+|+.|++++|++++..+. .++.+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|+.+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 566777777777655443 4777888888888888888777888888888888888888888888888888888888888
Q ss_pred cCcccccCCCCCccccccccEEeCcceeeecccC
Q 001867 533 ADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIP 566 (1002)
Q Consensus 533 s~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip 566 (1002)
++|+|++.+|..++.+++|++|+|++|++++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 8888888888888888888888888888887665
No 375
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=6.1e-18 Score=180.30 Aligned_cols=153 Identities=18% Similarity=0.164 Sum_probs=108.5
Q ss_pred CCcCCeeeecCCccEEEEEE-cCCcE--EEEEEeeccccccccCC------Ccccc-ccccchhhHHhHHHHHHHHhcCC
Q 001867 685 LDEDNVIGSGSSGKVYKVVL-SNGEA--VAVKKLWRGMSKECESG------CDVEK-GQVQDQVQDDGFQAEVETLGKIR 754 (1002)
Q Consensus 685 ~~~~~~LG~G~fg~Vy~~~~-~~~~~--vavK~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~E~~~l~~l~ 754 (1002)
|++.+.||+|+||.||+|.. .+|+. ||||++........... ..... ...........+.+|+.+++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999997 67889 99999754311100000 00000 00001223457889999999998
Q ss_pred CCce--eeeeeEEecCCeeeEEEeccCC-C----ChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCeeeCC
Q 001867 755 HKNI--VKLWCCCTTRDCKLLVYEYMPN-G----SLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLH-HDCVPSIVHRD 826 (1002)
Q Consensus 755 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~~~iiHrD 826 (1002)
|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|++||| +. +|+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 8754 344432 356899999942 4 66665432 234567889999999999999 88 999999
Q ss_pred CCCCcEEECCCCCeEEccccCcccc
Q 001867 827 VKSNNILLDGDFGARVADFGVAKVV 851 (1002)
Q Consensus 827 lk~~NIll~~~~~~kl~DfGl~~~~ 851 (1002)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999765
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.7e-17 Score=169.35 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=77.7
Q ss_pred CcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccc
Q 001867 401 LGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLV 480 (1002)
Q Consensus 401 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 480 (1002)
+..+++|++|++++|.++ .+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++++..|..++.+++|+
T Consensus 62 l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 139 (197)
T 4ezg_A 62 IEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVN 139 (197)
T ss_dssp GGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCC
T ss_pred HhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCC
Confidence 444455555555555443 222445555555555555555555555556666666666666666655566666666666
Q ss_pred cccccccc-cCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccc
Q 001867 481 VLSGSENK-FTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFY 538 (1002)
Q Consensus 481 ~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 538 (1002)
.|++++|+ ++ .+| .+..+++|+.|++++|++++. + .+..+++|+.|++++|++.
T Consensus 140 ~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 140 SIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp EEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC---
T ss_pred EEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccC
Confidence 66666666 44 444 566677777777777777653 3 5667777777777777765
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=1.4e-17 Score=184.67 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=62.9
Q ss_pred CCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCc-EEEccCccccCCCCCcCCCCCcceEEE
Q 001867 357 SPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLT-RVRLGYNRLTGKVPPLLWGLPHVYLLE 435 (1002)
Q Consensus 357 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~ 435 (1002)
++|+.|+|++|+++...+..|..+.+|+++++.+| ++...+.+|.++++|+ .+++.+ +++.+.+.+|.++++|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 44555555555555444445555555555555555 4445556666666676 677666 56555566677777777777
Q ss_pred cccCcccCccccccccCCcccEEE
Q 001867 436 LTDNFLSGEISKNIAGAANLSLLI 459 (1002)
Q Consensus 436 L~~N~i~~~~~~~~~~l~~L~~L~ 459 (1002)
+++|.++.+.+..|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 777777766666777777777665
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=1.8e-16 Score=157.14 Aligned_cols=132 Identities=24% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCcEEEccCcccc-CCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccccccccc
Q 001867 405 QSLTRVRLGYNRLT-GKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLS 483 (1002)
Q Consensus 405 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 483 (1002)
++|++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++.+|..++.+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666677766666 45555555666666666666665544 4455555566666666666544555555555555555
Q ss_pred ccccccCCCC-cccccccccCCeeecCCCcCCcccc---cccccccccccccccCcccc
Q 001867 484 GSENKFTGSL-PESLTNLAELGSLDLHANDLSGELP---SSVSSWKKLNELNLADNLFY 538 (1002)
Q Consensus 484 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 538 (1002)
+++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555555321 1445555555555555555554333 24445555555555555544
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=2.4e-16 Score=159.77 Aligned_cols=128 Identities=27% Similarity=0.327 Sum_probs=81.4
Q ss_pred cEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCc
Q 001867 456 SLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADN 535 (1002)
Q Consensus 456 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 535 (1002)
+.+++++|+++ .+|..+. ++|+.|++++|+|+ .+|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34556666665 4454332 46666666666666 55666666666666666666666666666666666666666666
Q ss_pred ccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCC
Q 001867 536 LFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGE 587 (1002)
Q Consensus 536 ~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~ 587 (1002)
+|++..|..|..+++|++|+|++|+|++..+..+..+ +|+.|+|++|++...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 6666555666667777777777777765444456555 567777777766543
No 380
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=3e-17 Score=182.05 Aligned_cols=100 Identities=11% Similarity=0.103 Sum_probs=58.3
Q ss_pred ccccceeeccccccC--CCCCccCCCCCcceeecCCCcccCcCCcccCC--------CcccchhcccccccCCCCCCCCC
Q 001867 285 LTSLRLLDASMNDLT--GPIPDDLTRLPLESLNLYENRLEGSLPATIAD--------SPGLYELRLFRNRLNGTLPGDLG 354 (1002)
Q Consensus 285 l~~L~~L~Ls~N~l~--~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~ 354 (1002)
+++|+.|||++|++. ...+..+.. +..+.+..|.| .+..|.+ +++|++|.|.+ .++.+.+.+|.
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~--~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~ 121 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPN--GKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFK 121 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGG--GCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTT
T ss_pred hccCeEEecCcceeEEecCccccccc--ccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHhh
Confidence 566777777777776 111111111 23344444432 2344555 77777777777 77766677777
Q ss_pred CCCCCceEEccCccccCCCChhhhccCcccceeeec
Q 001867 355 KNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIY 390 (1002)
Q Consensus 355 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 390 (1002)
.+++|+.|++++|.++...+..|....++..+.+..
T Consensus 122 ~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 122 GCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp TCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred cCcccceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 777777777777777655556665555555444433
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=2e-16 Score=156.83 Aligned_cols=132 Identities=24% Similarity=0.189 Sum_probs=61.2
Q ss_pred CcceEEEcccCccc-CccccccccCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeee
Q 001867 429 PHVYLLELTDNFLS-GEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLD 507 (1002)
Q Consensus 429 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 507 (1002)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..++.+++|+.|++++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 34444444455555555555554432 4444444555555555555443444444444455555
Q ss_pred cCCCcCCccc-ccccccccccccccccCcccccCCC---CCccccccccEEeCcceeee
Q 001867 508 LHANDLSGEL-PSSVSSWKKLNELNLADNLFYGNIP---EDIGNLSVLNYLDLSNNRLS 562 (1002)
Q Consensus 508 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ip---~~~~~l~~L~~L~Ls~N~l~ 562 (1002)
|++|++++.. +..+..+++|+.|+|++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555444321 1344444444444444444442222 13444444444444444443
No 382
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=1.7e-16 Score=174.91 Aligned_cols=151 Identities=13% Similarity=0.114 Sum_probs=104.3
Q ss_pred CCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCcccc-ccccc--------hhhHHhHHHHHHHHhcCCC
Q 001867 685 LDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEK-GQVQD--------QVQDDGFQAEVETLGKIRH 755 (1002)
Q Consensus 685 ~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~E~~~l~~l~h 755 (1002)
|++.+.||+|+||.||+|...+|+.||||+++...... . .+.. ..+.. ........+|...+.++.+
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sf-r---~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~ 172 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISF-R---TVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE 172 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECC-C---CCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccH-H---HHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence 78899999999999999999899999999986432210 0 0000 00000 0111223467777777754
Q ss_pred CceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEEC
Q 001867 756 KNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLD 835 (1002)
Q Consensus 756 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~ 835 (1002)
.++....-+... ..++||||++|++|.++... +....++.|++.++.|||+. +||||||||.|||++
T Consensus 173 ~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 173 EGFPVPEPIAQS--RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp TTCSCCCEEEEE--TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred cCCCCCeeeecc--CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 443222212122 23799999998888765431 23457889999999999998 999999999999998
Q ss_pred CCCC----------eEEccccCccccc
Q 001867 836 GDFG----------ARVADFGVAKVVD 852 (1002)
Q Consensus 836 ~~~~----------~kl~DfGl~~~~~ 852 (1002)
+++. +.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 7763 8999999887544
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=3.6e-16 Score=151.55 Aligned_cols=127 Identities=20% Similarity=0.198 Sum_probs=58.6
Q ss_pred CCCcEEEccCcccc-CCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccccccccc
Q 001867 405 QSLTRVRLGYNRLT-GKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLVVLS 483 (1002)
Q Consensus 405 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 483 (1002)
++|+.|++++|+++ +.+|..+..+++|+.|++++|.+++. ..++.+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--------------------------~~~~~l~~L~~L~ 70 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--------------------------ANLPKLNKLKKLE 70 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--------------------------TTCCCCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--------------------------hhhhcCCCCCEEE
Confidence 45555555555555 44454444444444444444444433 2333344444444
Q ss_pred ccccccCCCCcccccccccCCeeecCCCcCCcc-cccccccccccccccccCcccccCCC---CCccccccccEEeCc
Q 001867 484 GSENKFTGSLPESLTNLAELGSLDLHANDLSGE-LPSSVSSWKKLNELNLADNLFYGNIP---EDIGNLSVLNYLDLS 557 (1002)
Q Consensus 484 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~ip---~~~~~l~~L~~L~Ls 557 (1002)
+++|++++.+|..+..+++|++|++++|++++. .|..++.+++|+.|++++|.+++..+ ..++.+++|++||++
T Consensus 71 Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 71 LSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 444444433444444444444444444444432 22444444455555555555443322 234445555555544
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=4.6e-16 Score=150.84 Aligned_cols=129 Identities=24% Similarity=0.210 Sum_probs=89.0
Q ss_pred cCcccceeeeccccc-cCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEE
Q 001867 380 KGELEELLMIYNSFT-GQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLL 458 (1002)
Q Consensus 380 l~~L~~L~l~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 458 (1002)
.++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|+.|++++|.+++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999999 78999999999999999999999976 677778888877777777776555555556666666
Q ss_pred EccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccc---ccccccccccccccc
Q 001867 459 IISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELP---SSVSSWKKLNELNLA 533 (1002)
Q Consensus 459 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 533 (1002)
++++|++++. | .|..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~-~----------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDL-S----------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSH-H----------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCCh-H----------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6666665532 1 12444455555555555555554433 345555555555554
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=1.5e-15 Score=154.01 Aligned_cols=110 Identities=25% Similarity=0.288 Sum_probs=95.5
Q ss_pred CcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccc
Q 001867 453 ANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNL 532 (1002)
Q Consensus 453 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 532 (1002)
++|+.|+|++|+++ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 46777888888887 67788888888999999999998777788999999999999999999888889999999999999
Q ss_pred cCcccccCCCCCccccccccEEeCcceeeec
Q 001867 533 ADNLFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 533 s~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
++|.|++..+..|..+++|+.|+|++|++..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999996555678899999999999999985
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=1e-15 Score=153.15 Aligned_cols=133 Identities=21% Similarity=0.197 Sum_probs=92.8
Q ss_pred ccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccC
Q 001867 455 LSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLAD 534 (1002)
Q Consensus 455 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 534 (1002)
.+.+++++|+++ .+|..+ .++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|+.+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 345666666666 445433 35677777777777765555667777777777777777766666677777777777777
Q ss_pred cccccCCCCCccccccccEEeCcceeeecccCCccccc-ccceEEeccccCcCCCCh
Q 001867 535 NLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPS 590 (1002)
Q Consensus 535 N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~ 590 (1002)
|.+++..+..+..+++|++|+|++|++++..+..+..+ +|+.|+|++|++++..|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 77776555567777778888888887776555455666 677788888888777663
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=1.9e-15 Score=151.09 Aligned_cols=114 Identities=23% Similarity=0.194 Sum_probs=91.6
Q ss_pred CcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccc
Q 001867 453 ANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNL 532 (1002)
Q Consensus 453 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 532 (1002)
++|+.|++++|++++..+..++.+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 46677777777777655666777888888888888888666666788888888889888888877778888899999999
Q ss_pred cCcccccCCCCCccccccccEEeCcceeeecccC
Q 001867 533 ADNLFYGNIPEDIGNLSVLNYLDLSNNRLSGRIP 566 (1002)
Q Consensus 533 s~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~ip 566 (1002)
++|.+++..+..+..+++|++|+|++|++++..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999986555556889999999999999987665
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=2.6e-14 Score=161.74 Aligned_cols=256 Identities=13% Similarity=0.076 Sum_probs=135.4
Q ss_pred ccccccccccccchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCC
Q 001867 229 EIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTR 308 (1002)
Q Consensus 229 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 308 (1002)
+...+|.++ +|+.+++..| ++.+...+|.+ .+|+.+.+.+ .+..+.+.+|.++++|+.++++.|+++......|..
T Consensus 127 I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~ 202 (401)
T 4fdw_A 127 IPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVY 202 (401)
T ss_dssp ECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTT
T ss_pred ehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEee
Confidence 334445543 4666665544 55455555655 3566666664 555555567777777777777777776444444444
Q ss_pred CCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceee
Q 001867 309 LPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLM 388 (1002)
Q Consensus 309 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 388 (1002)
..|+.+.|..+ ++......|.++++|+.+.+..| ++.+...+|.+ .+|+.+++ .|.++......|..+.+|+.+.+
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 44666666533 55455566666666666666553 44444445554 55666655 23344333444444444444444
Q ss_pred eccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCC
Q 001867 389 IYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGS 468 (1002)
Q Consensus 389 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 468 (1002)
.+|.+.. +.+..+.+.+|.++++|+.+++. +.++.+....|.++.+|+.++|..| ++..
T Consensus 279 ~~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I 337 (401)
T 4fdw_A 279 YGSTFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQI 337 (401)
T ss_dssp ESSCCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEE
T ss_pred CCccccC-------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEE
Confidence 4443320 00002334445555555555555 2344444555555555555555333 4333
Q ss_pred CccccccccccccccccccccCCCCcccccccc-cCCeeecCCCcCC
Q 001867 469 LPEEIGFLKSLVVLSGSENKFTGSLPESLTNLA-ELGSLDLHANDLS 514 (1002)
Q Consensus 469 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 514 (1002)
-+..|..+ +|+.+++++|.+....+..|..++ +++.|++..|.+.
T Consensus 338 ~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 338 NFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 34455555 566666666655544445555553 5667776666544
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=2.3e-14 Score=162.22 Aligned_cols=248 Identities=9% Similarity=-0.006 Sum_probs=134.3
Q ss_pred CccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCC
Q 001867 280 TGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPL 359 (1002)
Q Consensus 280 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 359 (1002)
.+|.++ +|+.+++..| ++......|....|+.+.+.. .++...+..|.++++|+.+++.+|+++.+....|. .++|
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hhcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 344442 4555554433 332222233333344444442 33334444555555555555555555544444444 3455
Q ss_pred ceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccC
Q 001867 360 RWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDN 439 (1002)
Q Consensus 360 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 439 (1002)
+.+.|.++ ++ .....+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .|
T Consensus 206 ~~l~lp~~-l~------------------------~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~ 257 (401)
T 4fdw_A 206 EEVLLPVT-LK------------------------EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PN 257 (401)
T ss_dssp SEEECCTT-CC------------------------EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ET
T ss_pred CEEEeCCc-hh------------------------eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CC
Confidence 55555422 33 333444444444555554432 33333334444 44555555 23
Q ss_pred cccCccccccccCCcccEEEccCCcCC-----CCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCC
Q 001867 440 FLSGEISKNIAGAANLSLLIISKNNLS-----GSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLS 514 (1002)
Q Consensus 440 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 514 (1002)
.++.+....|.++.+|+.+++.+|.+. ...+..|..+++|+.+.+. |.++..-..+|.++++|+.++|.+| ++
T Consensus 258 ~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 258 GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC
T ss_pred CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc
Confidence 344444555555555666655555443 2334566677777777777 3466445567777888888888554 66
Q ss_pred cccccccccccccccccccCcccccCCCCCccccc-cccEEeCcceeee
Q 001867 515 GELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLS-VLNYLDLSNNRLS 562 (1002)
Q Consensus 515 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~-~L~~L~Ls~N~l~ 562 (1002)
..-+.+|.++ +|+.+++++|.+....+..|.+++ .++.|++..|.+.
T Consensus 336 ~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 336 QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 5667778888 888888888877755556677774 6777877766544
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=4.1e-17 Score=166.59 Aligned_cols=111 Identities=19% Similarity=0.206 Sum_probs=49.3
Q ss_pred cCCcccEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccc
Q 001867 451 GAANLSLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNEL 530 (1002)
Q Consensus 451 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 530 (1002)
.+++|+.|++++|++++ +| .++.+++|+.|++++|+++ .+|..+..+++|+.|+|++|++++ +| .+..+++|+.|
T Consensus 46 ~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L 120 (198)
T 1ds9_A 46 TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVL 120 (198)
T ss_dssp HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEE
T ss_pred cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEE
Confidence 33333334444443332 33 3444444444444444444 334444444444444444444443 22 34444455555
Q ss_pred cccCcccccCCC--CCccccccccEEeCcceeeecccCC
Q 001867 531 NLADNLFYGNIP--EDIGNLSVLNYLDLSNNRLSGRIPV 567 (1002)
Q Consensus 531 ~Ls~N~l~~~ip--~~~~~l~~L~~L~Ls~N~l~~~ip~ 567 (1002)
+|++|.+++ +| ..+..+++|++|++++|++++.+|.
T Consensus 121 ~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 121 YMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred ECCCCcCCc-hhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 555555442 22 2444555555555555555544443
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=9.6e-17 Score=163.83 Aligned_cols=155 Identities=25% Similarity=0.325 Sum_probs=112.4
Q ss_pred CcCCCCCcEEEccCccccCCCCC------cCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccc
Q 001867 401 LGHCQSLTRVRLGYNRLTGKVPP------LLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIG 474 (1002)
Q Consensus 401 l~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 474 (1002)
+.....++.++++.|.+++..|. .+..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34456677777777777777776 67777888888888888776 34 7777788888888888877 6677777
Q ss_pred cccccccccccccccCCCCcccccccccCCeeecCCCcCCcccc-cccccccccccccccCcccccCCCCC---------
Q 001867 475 FLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELP-SSVSSWKKLNELNLADNLFYGNIPED--------- 544 (1002)
Q Consensus 475 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ip~~--------- 544 (1002)
.+++|+.|++++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+++.+|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 77788888888888874 45 57777888888888888775433 46777788888888888887666653
Q ss_pred -ccccccccEEeCcceeee
Q 001867 545 -IGNLSVLNYLDLSNNRLS 562 (1002)
Q Consensus 545 -~~~l~~L~~L~Ls~N~l~ 562 (1002)
+..+++|+.|| +|.++
T Consensus 169 ~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHCSSCSEEC--CGGGT
T ss_pred HHHhCCCcEEEC--CcccC
Confidence 66777777766 55444
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=8.6e-15 Score=146.19 Aligned_cols=133 Identities=20% Similarity=0.174 Sum_probs=72.2
Q ss_pred CcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCccccccccccc
Q 001867 401 LGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLKSLV 480 (1002)
Q Consensus 401 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 480 (1002)
+.++.+|++|++++|+++. +|......++|+.|++++|.|++. ..++.+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--------------------------~~l~~l~~L~ 67 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--------------------------DGFPLLRRLK 67 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--------------------------CCCCCCSSCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--------------------------cccccCCCCC
Confidence 3455666666666666663 233222222444444444444432 3444455555
Q ss_pred cccccccccCCCCcccccccccCCeeecCCCcCCccccc--ccccccccccccccCcccccCCCCC----ccccccccEE
Q 001867 481 VLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPS--SVSSWKKLNELNLADNLFYGNIPED----IGNLSVLNYL 554 (1002)
Q Consensus 481 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~ip~~----~~~l~~L~~L 554 (1002)
.|++++|++++..|..+..+++|+.|+|++|+++ .+|. .+..+++|+.|+|++|.++ .+|.. ++.+++|+.|
T Consensus 68 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 68 TLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp EEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred EEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 5555555555332233355566666666666664 3343 5566666666666666665 45553 6667777777
Q ss_pred eCcceeee
Q 001867 555 DLSNNRLS 562 (1002)
Q Consensus 555 ~Ls~N~l~ 562 (1002)
|+++|.+.
T Consensus 146 d~~~n~~~ 153 (176)
T 1a9n_A 146 DFQKVKLK 153 (176)
T ss_dssp TTEECCHH
T ss_pred CCCcCCHH
Confidence 77777654
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=6.1e-15 Score=147.25 Aligned_cols=133 Identities=16% Similarity=0.197 Sum_probs=114.4
Q ss_pred ccccCCcccEEEccCCcCCCCCcccccccc-ccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccc
Q 001867 448 NIAGAANLSLLIISKNNLSGSLPEEIGFLK-SLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKK 526 (1002)
Q Consensus 448 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 526 (1002)
.+..+.+|+.|++++|+++ .+|. +..+. +|+.|++++|++++. ..+..+++|++|+|++|+|++..|..|+.+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4566788999999999998 4555 44544 999999999999964 68999999999999999999776677799999
Q ss_pred cccccccCcccccCCCC--CccccccccEEeCcceeeecccCCc----cccc-ccceEEeccccCcC
Q 001867 527 LNELNLADNLFYGNIPE--DIGNLSVLNYLDLSNNRLSGRIPVG----LQNL-KLNQLNVSNNRLSG 586 (1002)
Q Consensus 527 L~~L~Ls~N~l~~~ip~--~~~~l~~L~~L~Ls~N~l~~~ip~~----~~~l-~L~~l~ls~N~l~g 586 (1002)
|+.|+|++|.++ .+|. .++.+++|+.|+|++|+++ .+|.. +..+ +|+.||+++|.+..
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999999996 6777 8999999999999999998 56764 7777 89999999998763
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=9.9e-14 Score=157.77 Aligned_cols=315 Identities=11% Similarity=0.036 Sum_probs=140.1
Q ss_pred CCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCcccccccccceeeeccccccCccccc
Q 001867 105 INSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAF 184 (1002)
Q Consensus 105 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 184 (1002)
++.+-..+|.++.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++.....+|.++.+|+.+.+..+ +......+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 3334445666666666666653 244444555666666666666543 33333445555555555544432 22233333
Q ss_pred cccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccccchhcccCcccccccCcccccccce
Q 001867 185 LGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLALNNLVGAIPSSLTELASV 264 (1002)
Q Consensus 185 l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 264 (1002)
|.++..+........ ......+|.++++|+.+.+..+. ......+|.++.+|
T Consensus 136 F~~~~~~~~~~~~~~---------------------------~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L 187 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV---------------------------TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKL 187 (394)
T ss_dssp TTTCCCSEEECCTTC---------------------------CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTC
T ss_pred eecccccccccCccc---------------------------cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCc
Confidence 433322222211111 11223345555555555554332 22334455555555
Q ss_pred eeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCcccCcCCcccCCCcccchhcccccc
Q 001867 265 VQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENRLEGSLPATIADSPGLYELRLFRNR 344 (1002)
Q Consensus 265 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 344 (1002)
+.+.+..| ++.....+|.++..|+.+.+..+... .....+....|+.+.+..+ ++......+.++..|+.+.+..+.
T Consensus 188 ~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~ 264 (394)
T 4fs7_A 188 KSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK 264 (394)
T ss_dssp CBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT
T ss_pred eEEEcCCC-ceEeCchhhccccccceeecCCCceE-eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCc
Confidence 55555444 33334445666666666655544332 1111122223444444322 222333445555555555555443
Q ss_pred cCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCc
Q 001867 345 LNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPL 424 (1002)
Q Consensus 345 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 424 (1002)
.. +....|.....++.+....+.+. ...|....+|+.+.+.++ ++.....+|.++.+|+.++|..+ ++.+...+
T Consensus 265 ~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 265 LR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp CE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 32 44445555555555555544332 223444444444444332 33333444444555555544322 33333334
Q ss_pred CCCCCcceEEEcccCcccCccccccccCCcccEEEc
Q 001867 425 LWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLII 460 (1002)
Q Consensus 425 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 460 (1002)
|.++.+|+.+++..| ++.+...+|.++.+|+.+++
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 444444444444333 33333333444444444433
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=1.8e-13 Score=155.58 Aligned_cols=335 Identities=11% Similarity=0.015 Sum_probs=220.1
Q ss_pred cCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCccccccCCccccccccccccCCCCcc
Q 001867 81 IAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPES 160 (1002)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~ 160 (1002)
++.+-..+|.++++|+.+.|.. .++.+-..+|.+|++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +......+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 4444567899999999999975 477777889999999999999865 66566788999999999988765 44456677
Q ss_pred cccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCccccccccccccccccc
Q 001867 161 FGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKL 240 (1002)
Q Consensus 161 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 240 (1002)
|.+...++....... ......+|.++++|+.+.+..+.. ..-...|.++++|+.+.+..+ ++.....+|.++..|
T Consensus 136 F~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~--~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSME--TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTCC--EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eecccccccccCccc--cccchhhhcccCCCcEEecCCccc--eeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 877765554443333 334457789999999999987642 222346778888888888766 554666778888888
Q ss_pred chhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCCc
Q 001867 241 VDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYENR 320 (1002)
Q Consensus 241 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~ 320 (1002)
+.+.+..+... +........+|+.+.+..+ ++.....+|..+..|+.+.+..+...
T Consensus 211 ~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~--------------------- 266 (394)
T 4fs7_A 211 ENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR--------------------- 266 (394)
T ss_dssp CBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE---------------------
T ss_pred ceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce---------------------
Confidence 88887765443 2222333456666666433 23344455666777777766655432
Q ss_pred ccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCc
Q 001867 321 LEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDG 400 (1002)
Q Consensus 321 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 400 (1002)
.....|..+..++.+....+.+ ....|....+|+.+.+.++ ++.....+|..+.+|+.+.+.++ ++.....+
T Consensus 267 ---i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 267 ---IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp ---ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ---eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 2233344444444444443332 2234556666666666544 44444556666677777776533 55555677
Q ss_pred CcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEE
Q 001867 401 LGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLL 458 (1002)
Q Consensus 401 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 458 (1002)
|.+|.+|+.+++..| ++.+...+|.++++|+.+++..+ +. .+...|.++++|+.+
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 788888888888766 66566777888888888888655 22 234567777776654
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=6.3e-14 Score=138.78 Aligned_cols=105 Identities=27% Similarity=0.267 Sum_probs=59.6
Q ss_pred cEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCc
Q 001867 456 SLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADN 535 (1002)
Q Consensus 456 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 535 (1002)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|||++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45666666665 3454432 55556666666666555555556666666666666666555555555555666666666
Q ss_pred ccccCCCCCccccccccEEeCcceeeec
Q 001867 536 LFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 536 ~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
+|++..|..|..+++|++|+|++|+++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 5554444445555555555555555554
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=1.1e-13 Score=137.06 Aligned_cols=110 Identities=21% Similarity=0.232 Sum_probs=99.4
Q ss_pred ccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCc
Q 001867 478 SLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLS 557 (1002)
Q Consensus 478 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls 557 (1002)
..+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4678999999999 5787664 899999999999999999999999999999999999997767778999999999999
Q ss_pred ceeeecccCCccccc-ccceEEeccccCcCCCCh
Q 001867 558 NNRLSGRIPVGLQNL-KLNQLNVSNNRLSGELPS 590 (1002)
Q Consensus 558 ~N~l~~~ip~~~~~l-~L~~l~ls~N~l~g~~p~ 590 (1002)
+|+|++..|..+..+ +|+.|+|++|++++..+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 999998777778888 899999999999987663
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=1.6e-13 Score=136.41 Aligned_cols=105 Identities=24% Similarity=0.248 Sum_probs=62.9
Q ss_pred cEEEccCCcCCCCCccccccccccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCc
Q 001867 456 SLLIISKNNLSGSLPEEIGFLKSLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADN 535 (1002)
Q Consensus 456 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 535 (1002)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 4555443 56666666666666555666666666666666666666555555566666666666666
Q ss_pred ccccCCCCCccccccccEEeCcceeeec
Q 001867 536 LFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 536 ~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
+|++..+..|..+++|++|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 6664333346666666666666666653
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=2.9e-13 Score=134.43 Aligned_cols=110 Identities=28% Similarity=0.325 Sum_probs=82.0
Q ss_pred eeEEeCCCCeEEEEEcCCCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCcccccccccccccCCCCcccccc
Q 001867 61 GVECDPRSHSVASIDLSNANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADL 140 (1002)
Q Consensus 61 gv~C~~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L 140 (1002)
+++|.. +.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+
T Consensus 9 ~C~C~~-----~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l 80 (174)
T 2r9u_A 9 QCSCDQ-----TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKL 80 (174)
T ss_dssp TSEECS-----SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCEECC-----cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCc
Confidence 556742 46888888886 4555553 788888888888888778888888888888888888886655667777
Q ss_pred CCccccccccccccCCCCcccccccccceeeecccccc
Q 001867 141 PNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLD 178 (1002)
Q Consensus 141 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 178 (1002)
++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 81 ~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 81 TQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred chhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 88888888888877655556777777777777777766
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=2.7e-12 Score=143.25 Aligned_cols=102 Identities=22% Similarity=0.191 Sum_probs=52.4
Q ss_pred ccccc-ccCCCCcccccccccCCeeecCC-CcCCcccccccccccccccccccCcccccCCCCCccccccccEEeCccee
Q 001867 483 SGSEN-KFTGSLPESLTNLAELGSLDLHA-NDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNR 560 (1002)
Q Consensus 483 ~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~ 560 (1002)
+++++ +++ .+|. +..+++|+.|+|++ |.|++..|..|+.|++|+.|+|++|+|++.+|..|++|++|++|||++|+
T Consensus 14 ~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 444 3444 55555555555553 55555444555555555555555555555445555555555555555555
Q ss_pred eecccCCcccccccceEEeccccCcC
Q 001867 561 LSGRIPVGLQNLKLNQLNVSNNRLSG 586 (1002)
Q Consensus 561 l~~~ip~~~~~l~L~~l~ls~N~l~g 586 (1002)
|++.+|..+..+.|+.|+|++|+|..
T Consensus 92 l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 92 LESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp CSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred cceeCHHHcccCCceEEEeeCCCccC
Confidence 55444444444445555555555543
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=1.8e-14 Score=161.44 Aligned_cols=159 Identities=21% Similarity=0.152 Sum_probs=77.4
Q ss_pred CCCcEEEccCccccCCCCCcCC-----CCCcceEEEcccCcccCcccccc-ccCCcccEEEccCCcCCCCCccccc----
Q 001867 405 QSLTRVRLGYNRLTGKVPPLLW-----GLPHVYLLELTDNFLSGEISKNI-AGAANLSLLIISKNNLSGSLPEEIG---- 474 (1002)
Q Consensus 405 ~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~---- 474 (1002)
++|+.|+|++|+++......+. ..++|+.|+|++|.|+......+ ..+.+|+.|+|++|+++......++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4566666666666532222221 11455556666655543322222 2234566666666666533333332
Q ss_pred -cccccccccccccccCC----CCcccccccccCCeeecCCCcCCccc----ccccccccccccccccCcccccC----C
Q 001867 475 -FLKSLVVLSGSENKFTG----SLPESLTNLAELGSLDLHANDLSGEL----PSSVSSWKKLNELNLADNLFYGN----I 541 (1002)
Q Consensus 475 -~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----i 541 (1002)
..++|+.|+|++|.|+. .++..+..+++|++|||++|.|++.. +..+...++|+.|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 23455666666665542 12233344555666666666655322 33444455555555555555432 2
Q ss_pred CCCccccccccEEeCcceeeec
Q 001867 542 PEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 542 p~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
+..+...++|++|||++|+++.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 2333344556666666665554
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.25 E-value=5.9e-11 Score=134.80 Aligned_cols=90 Identities=11% Similarity=0.084 Sum_probs=47.8
Q ss_pred CCCCCCccccC-cccccccccccccCCCCccccccCCcccccccccc---ccCCCCcccccccccceeeeccccccCccc
Q 001867 107 STLPDDISACQ-NLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNN---FSGDIPESFGRFQKLEVISLVYNLLDGTIP 182 (1002)
Q Consensus 107 ~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 182 (1002)
.+-..+|.++. .|+.+.+..+ ++.+...+|.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++.+..
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 33445666663 4666666543 554555666666666666666553 44333445555555555555433 332334
Q ss_pred cccccccccccccccC
Q 001867 183 AFLGNISTLKMLNLSY 198 (1002)
Q Consensus 183 ~~l~~l~~L~~L~Ls~ 198 (1002)
.+|.++.+|+.+.+..
T Consensus 131 ~aF~~c~~L~~i~lp~ 146 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPE 146 (394)
T ss_dssp TTTTTCTTCCEEECCT
T ss_pred hhhhhhcccccccccc
Confidence 4455555555555543
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.24 E-value=5.3e-11 Score=135.14 Aligned_cols=334 Identities=11% Similarity=0.099 Sum_probs=198.6
Q ss_pred CCCccccCCC-CCCEEeccCCCCCCCCCCCccccCccccccccccc---ccCCCCccccccCCccccccccccccCCCCc
Q 001867 84 PFPSLLCRLE-NLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNL---LTGTLTPALADLPNLKFLDLTGNNFSGDIPE 159 (1002)
Q Consensus 84 ~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~ 159 (1002)
+-..+|.+.. .|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++.....
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhh
Confidence 3455787774 5999999764 777778899999999999998874 66566778999999999998766 5546667
Q ss_pred ccccccccceeeeccccccCccccccccccccccccccCCCCCCCCCCcccCCCCccchhhccCcccccccccccccccc
Q 001867 160 SFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAK 239 (1002)
Q Consensus 160 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 239 (1002)
+|..+.+|+.+.+..+ +..+....|.++.+|+.+.+..+- ..+........+|+.+.+..+-.. ....+|..+.+
T Consensus 132 aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~~---~~I~~~aF~~~~l~~i~ip~~~~~-i~~~af~~c~~ 206 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDSV---TAIEERAFTGTALTQIHIPAKVTR-IGTNAFSECFA 206 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTTC---CEECTTTTTTCCCSEEEECTTCCE-ECTTTTTTCTT
T ss_pred hhhhhcccccccccce-eeeecccceeccccccccccccee---eEeccccccccceeEEEECCcccc-cccchhhhccc
Confidence 8999999999999754 444667788889999998887662 123222222345666666544322 44455666655
Q ss_pred cchhcccCcccccccCcccccccceeeeeccCCcccCCCCCccccccccceeeccccccCCCCCccCCCCCcceeecCCC
Q 001867 240 LVDLDLALNNLVGAIPSSLTELASVVQIELYNNSLTGDLPTGWSNLTSLRLLDASMNDLTGPIPDDLTRLPLESLNLYEN 319 (1002)
Q Consensus 240 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N 319 (1002)
+.......+..... ...+ +............. .....+..+.+. +
T Consensus 207 l~~~~~~~~~~~~~-~~~~-----------------------~~~~~~~~~~~~~~----------~~~~~~~~~~ip-~ 251 (394)
T 4gt6_A 207 LSTITSDSESYPAI-DNVL-----------------------YEKSANGDYALIRY----------PSQREDPAFKIP-N 251 (394)
T ss_dssp CCEEEECCSSSCBS-SSCE-----------------------EEECTTSCEEEEEC----------CTTCCCSEEECC-T
T ss_pred cceecccccccccc-ccee-----------------------eccccccccccccc----------ccccccceEEcC-C
Confidence 55554443333211 1110 00000000000000 000001111111 1
Q ss_pred cccCcCCcccCCCcccchhcccccccCCCCCCCCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCC
Q 001867 320 RLEGSLPATIADSPGLYELRLFRNRLNGTLPGDLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPD 399 (1002)
Q Consensus 320 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 399 (1002)
.+.......|.++..|+.+.+.++... +...+|.+.+.|+.+.+. +.++......|.++.+|+.+.+..+ ++.....
T Consensus 252 ~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 328 (394)
T 4gt6_A 252 GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDD 328 (394)
T ss_dssp TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHh
Confidence 222233445666666666666544332 445566667777777775 4455455566667777777777643 5555667
Q ss_pred cCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCC
Q 001867 400 GLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLS 466 (1002)
Q Consensus 400 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 466 (1002)
+|.+|.+|+.+.+..+ ++.+...+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+.
T Consensus 329 aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 329 AFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred HhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 7888888888888644 665666778888888888888776532 35667778888887776553
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=1.1e-13 Score=155.04 Aligned_cols=188 Identities=21% Similarity=0.157 Sum_probs=101.2
Q ss_pred CCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCc-CCCCCcEEEccCccccCCCCCcC-CCCCcceEE
Q 001867 357 SPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLG-HCQSLTRVRLGYNRLTGKVPPLL-WGLPHVYLL 434 (1002)
Q Consensus 357 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L 434 (1002)
+.|+.|+|++|.++......+... +. ..++|++|+|++|.++......+ ..+++|+.|
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~--------------------L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L 131 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAV--------------------LGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKL 131 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHH--------------------HSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEE
T ss_pred hhCCEEEecCCCCCHHHHHHHHHH--------------------HhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHh
Confidence 457777777777764433333322 00 11344444444444432211111 123445555
Q ss_pred EcccCcccCcccccc-----ccCCcccEEEccCCcCCCC----CccccccccccccccccccccCCC----Ccccccccc
Q 001867 435 ELTDNFLSGEISKNI-----AGAANLSLLIISKNNLSGS----LPEEIGFLKSLVVLSGSENKFTGS----LPESLTNLA 501 (1002)
Q Consensus 435 ~L~~N~i~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~ 501 (1002)
+|++|.|+......+ ...++|+.|+|++|.++.. ++..+..+++|+.|+|++|+|+.. ++..+...+
T Consensus 132 ~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 132 GLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp ECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred hcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 555555544333332 1345666777777766532 233345566777777777777632 245566677
Q ss_pred cCCeeecCCCcCCcc----cccccccccccccccccCcccccCCCCCcccc---cc--ccEEe--Ccceeeecc
Q 001867 502 ELGSLDLHANDLSGE----LPSSVSSWKKLNELNLADNLFYGNIPEDIGNL---SV--LNYLD--LSNNRLSGR 564 (1002)
Q Consensus 502 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l---~~--L~~L~--Ls~N~l~~~ 564 (1002)
+|+.|||++|.|++. ++..+...++|++|+|++|.|+..-...+..+ .. |+.+. +..|.++..
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~~~ 285 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSEY 285 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CHHH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccCHH
Confidence 888888888888753 33444556788888888888875444444433 22 77777 777777643
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=8.4e-12 Score=139.27 Aligned_cols=104 Identities=25% Similarity=0.188 Sum_probs=86.0
Q ss_pred EEEccCC-cCCCCCccccccccccccccccc-cccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccC
Q 001867 457 LLIISKN-NLSGSLPEEIGFLKSLVVLSGSE-NKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLAD 534 (1002)
Q Consensus 457 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 534 (1002)
.++.+++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|.+|++|+.|||++|+|++.+|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 787 5777 88888899999986 888877778889999999999999999988888899999999999999
Q ss_pred cccccCCCCCccccccccEEeCcceeeec
Q 001867 535 NLFYGNIPEDIGNLSVLNYLDLSNNRLSG 563 (1002)
Q Consensus 535 N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~ 563 (1002)
|+|++..|..+..++ |+.|+|++|+|..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999855555555555 9999999999874
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.17 E-value=5.6e-11 Score=126.89 Aligned_cols=145 Identities=17% Similarity=0.078 Sum_probs=112.7
Q ss_pred HhcCCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCcee
Q 001867 681 ILDGLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIV 759 (1002)
Q Consensus 681 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 759 (1002)
..++|++...+|.|+++.||++... ++.+++|+..... ......+.+|+.+++.+. +..+.
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~-----------------~~~~~~~~~E~~~l~~l~~~~~vP 73 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRY-----------------KGTTYDVEREKDMMLWLEGKLPVP 73 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGG-----------------TTSTTCHHHHHHHHHHHTTTSCCC
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCccc-----------------CCCHHHHHHHHHHHHHHhcCCCCC
Confidence 4567877888898999999999754 6899999873210 012345889999999885 67788
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDC--------------------- 818 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------- 818 (1002)
++++++.+.+..|+||||++|.+|.+.+. +......++.+++++++.||+..
T Consensus 74 ~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~ 146 (263)
T 3tm0_A 74 KVLHFERHDGWSNLLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLL 146 (263)
T ss_dssp CEEEEEEETTEEEEEEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHH
T ss_pred eEEEEEecCCceEEEEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHH
Confidence 99999999899999999999999887642 11224578899999999999810
Q ss_pred -----------------------------------CCCeeeCCCCCCcEEECCCCCeEEccccCccc
Q 001867 819 -----------------------------------VPSIVHRDVKSNNILLDGDFGARVADFGVAKV 850 (1002)
Q Consensus 819 -----------------------------------~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~ 850 (1002)
.+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 147 NNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13689999999999998765567999997753
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.04 E-value=2e-10 Score=122.33 Aligned_cols=129 Identities=18% Similarity=0.133 Sum_probs=97.5
Q ss_pred eecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc--eeeeeeEEecCC
Q 001867 692 GSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN--IVKLWCCCTTRD 769 (1002)
Q Consensus 692 G~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~ 769 (1002)
+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++....+
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--------------------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~ 88 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--------------------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG 88 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--------------------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--------------------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC
Confidence 466679999998777888999986221 1245788999999886434 566888888888
Q ss_pred eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------------
Q 001867 770 CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDC------------------------------- 818 (1002)
Q Consensus 770 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------- 818 (1002)
..++||||++|.++. ... .+ ...++.+++..++.||+..
T Consensus 89 ~~~~v~e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
T 1nd4_A 89 RDWLLLGEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDL 158 (264)
T ss_dssp CEEEEEECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSC
T ss_pred CCEEEEEecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhh
Confidence 899999999998884 221 12 2367788888899998742
Q ss_pred ------------------------CCCeeeCCCCCCcEEECCCCCeEEccccCccc
Q 001867 819 ------------------------VPSIVHRDVKSNNILLDGDFGARVADFGVAKV 850 (1002)
Q Consensus 819 ------------------------~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~ 850 (1002)
...++|||++|.||+++.++.+.|+|||.+..
T Consensus 159 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 159 DEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01399999999999998766667999998764
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.90 E-value=4.2e-09 Score=117.80 Aligned_cols=144 Identities=15% Similarity=0.217 Sum_probs=107.6
Q ss_pred cCCeeeecCCccEEEEEEcCCcEEEEEEee--ccccccccCCCccccccccchhhHHhHHHHHHHHhcCC--CCceeeee
Q 001867 687 EDNVIGSGSSGKVYKVVLSNGEAVAVKKLW--RGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR--HKNIVKLW 762 (1002)
Q Consensus 687 ~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~ 762 (1002)
..+.++.|.++.||++... +..+++|+.. ... .......+.+|+.+++.+. +..+++++
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~----------------~~~~~~~~~~E~~~l~~L~~~~vpvP~~~ 104 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSK----------------LLPSAHAIEREYRVMDALAGTDVPVAKMY 104 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC--------------------------CHHHHHHHHHHHTTSSSCCCCEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCC----------------CCCcHHHHHHHHHHHHHhhcCCCCCCcEE
Confidence 3567899999999998875 4678888753 110 0112356888999999987 45678899
Q ss_pred eEEecC---CeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------
Q 001867 763 CCCTTR---DCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDC--------------------- 818 (1002)
Q Consensus 763 ~~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------- 818 (1002)
+++.+. +..|+||||++|..+.+.. ...++..+...++.+++..|+.||+..
T Consensus 105 ~~~~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3dxp_A 105 ALCEDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIE 180 (359)
T ss_dssp EEECCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHH
T ss_pred EECCCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHH
Confidence 888776 4589999999988775421 134778889999999999999999731
Q ss_pred ----------------------------------CCCeeeCCCCCCcEEECCCCC--eEEccccCcccc
Q 001867 819 ----------------------------------VPSIVHRDVKSNNILLDGDFG--ARVADFGVAKVV 851 (1002)
Q Consensus 819 ----------------------------------~~~iiHrDlk~~NIll~~~~~--~kl~DfGl~~~~ 851 (1002)
.+.++|||+++.||+++.++. +.|+||+.+..-
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 181 RWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 247999999999999987653 689999998753
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.87 E-value=2.1e-08 Score=112.99 Aligned_cols=147 Identities=12% Similarity=0.066 Sum_probs=86.5
Q ss_pred CCcCcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCCCcccccccc
Q 001867 398 PDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGSLPEEIGFLK 477 (1002)
Q Consensus 398 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 477 (1002)
...+..+.+|+.+.+..+ ++......|.+...|+.+.+..+ ++.+....|.++.+|+.+.+..+ +.......|..+.
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 344555566666666543 33344555666666666666554 44455556666666666666543 3323344566667
Q ss_pred ccccccccccccCCCCcccccccccCCeeecCCCcCCcccccccccccccccccccCcccccCCCCCccccc
Q 001867 478 SLVVLSGSENKFTGSLPESLTNLAELGSLDLHANDLSGELPSSVSSWKKLNELNLADNLFYGNIPEDIGNLS 549 (1002)
Q Consensus 478 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~ 549 (1002)
+|+.+.+.++.++..-..+|.++++|+.++|..+ ++.+-..+|.++.+|+.+.+..+ ++..-..+|.+.+
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 7777777766666444567777777777777654 55455567777777777777544 4422234455543
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.86 E-value=3.3e-10 Score=125.60 Aligned_cols=85 Identities=13% Similarity=0.262 Sum_probs=47.5
Q ss_pred ccccCCeeecCCCcCCcccccccc---cccccccccccCcccccC----CCCCccccccccEEeCcceeeecccCCcccc
Q 001867 499 NLAELGSLDLHANDLSGELPSSVS---SWKKLNELNLADNLFYGN----IPEDIGNLSVLNYLDLSNNRLSGRIPVGLQN 571 (1002)
Q Consensus 499 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----ip~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~ 571 (1002)
.+++|+.|+|++|.+++..+..+. .+++|+.|+|+.|.+++. ++..+..+++|+.|+|++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356677777777776644433332 466677777777776642 3444455677777777777666432222222
Q ss_pred cccceEEecccc
Q 001867 572 LKLNQLNVSNNR 583 (1002)
Q Consensus 572 l~L~~l~ls~N~ 583 (1002)
.-...+++++|+
T Consensus 330 alg~~~~~~~~~ 341 (362)
T 2ra8_A 330 SLPMKIDVSDSQ 341 (362)
T ss_dssp HCCSEEECCSBC
T ss_pred HcCCEEEecCCc
Confidence 012345666655
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.85 E-value=2.3e-08 Score=112.78 Aligned_cols=109 Identities=15% Similarity=0.065 Sum_probs=56.6
Q ss_pred CCCCCCCCceEEccCccccCCCChhhhccCcccceeeeccccccCCCCcCcCCCCCcEEEccCccccCCCCCcCCCCCcc
Q 001867 352 DLGKNSPLRWVDLSNNQFTGEIPASLCEKGELEELLMIYNSFTGQLPDGLGHCQSLTRVRLGYNRLTGKVPPLLWGLPHV 431 (1002)
Q Consensus 352 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 431 (1002)
.|.....|+.+.+..+ ++......|....+|+.+.+..+ +.......|.++++|+.+.+.++.++.+...+|.++.+|
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCC
Confidence 3344444444444433 33233334444444444444322 333334455566666666666665655555566666666
Q ss_pred eEEEcccCcccCccccccccCCcccEEEccCC
Q 001867 432 YLLELTDNFLSGEISKNIAGAANLSLLIISKN 463 (1002)
Q Consensus 432 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N 463 (1002)
+.+.|.++ ++.+...+|.++.+|+.+.+..+
T Consensus 313 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 313 SSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred CEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 66666543 44455566666677776666543
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=7.4e-10 Score=122.82 Aligned_cols=155 Identities=18% Similarity=0.220 Sum_probs=91.3
Q ss_pred CcCCCCCcEEEccCccccCCCCCcCCCCCcceEEEcccCcccCccccccc--cCCcccEEEccC--CcCCCC-----Ccc
Q 001867 401 LGHCQSLTRVRLGYNRLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIA--GAANLSLLIISK--NNLSGS-----LPE 471 (1002)
Q Consensus 401 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~ 471 (1002)
+..+++|+.|+|++|.-. ..+. + .+++|+.|+|..|.+.......+. .+++|+.|+|+. |...+. +..
T Consensus 168 l~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred HhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 345566666666665211 1222 2 256677777766666543333333 566777777642 221111 111
Q ss_pred cc--ccccccccccccccccCCCCccccc---ccccCCeeecCCCcCCcc----cccccccccccccccccCcccccCCC
Q 001867 472 EI--GFLKSLVVLSGSENKFTGSLPESLT---NLAELGSLDLHANDLSGE----LPSSVSSWKKLNELNLADNLFYGNIP 542 (1002)
Q Consensus 472 ~~--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ip 542 (1002)
.+ ..+++|+.|+|++|.+++..+..+. .+++|++|||+.|.|++. ++..+..+++|+.|+|++|.++...-
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~ 324 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMK 324 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHH
Confidence 12 2467888888888887643333332 477889999999988864 34455678889999999888774322
Q ss_pred CCccc-cccccEEeCccee
Q 001867 543 EDIGN-LSVLNYLDLSNNR 560 (1002)
Q Consensus 543 ~~~~~-l~~L~~L~Ls~N~ 560 (1002)
..+.. + ...+++++|+
T Consensus 325 ~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 325 KELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHC--CSEEECCSBC
T ss_pred HHHHHHc--CCEEEecCCc
Confidence 22332 2 3568888887
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=3.8e-09 Score=115.15 Aligned_cols=187 Identities=21% Similarity=0.215 Sum_probs=123.1
Q ss_pred CCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCc--eeeeeeE
Q 001867 688 DNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKN--IVKLWCC 764 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~ 764 (1002)
.+.++.|....||++. +.+++|+... ......+.+|+.+++.+. +.. +.+++..
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~-------------------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~ 81 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH-------------------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFT 81 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS-------------------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC-------------------cchHHHHHHHHHHHHHHHhcCCCCCCceEee
Confidence 4579999999999863 5688887521 133567899999998873 332 3445544
Q ss_pred EecCC---eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc------------------------
Q 001867 765 CTTRD---CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHD------------------------ 817 (1002)
Q Consensus 765 ~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------ 817 (1002)
....+ ..|+|||+++|.++.+... ..++..++..++.|++..++.||+.
T Consensus 82 ~~~~~~~~~~~~vm~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
T 3sg8_A 82 GMPSETYQMSFAGFTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKI 157 (304)
T ss_dssp CCCCSSCSCSCEEEECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHH
T ss_pred cCCCCCCCcceEEEcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHH
Confidence 43332 3589999999988865332 2367788888999999999999961
Q ss_pred -------------------------------CCCCeeeCCCCCCcEEECC--CCCeEEccccCcccccCCCCCccccc--
Q 001867 818 -------------------------------CVPSIVHRDVKSNNILLDG--DFGARVADFGVAKVVDASGKPKSMSV-- 862 (1002)
Q Consensus 818 -------------------------------~~~~iiHrDlk~~NIll~~--~~~~kl~DfGl~~~~~~~~~~~~~~~-- 862 (1002)
..+.++|+|++|.||+++. +..+.++||+.+...+..........
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~ 237 (304)
T 3sg8_A 158 KKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDD 237 (304)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTT
T ss_pred HHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhc
Confidence 1136899999999999997 45678999999876433210000000
Q ss_pred ----------ccccccccC-ccccccCCCCCccchhhHHHHHHHHHhCCCCC
Q 001867 863 ----------IAGSCGYIA-PEYAYTLRVNEKSDIYSFGVVILELVTGRLPV 903 (1002)
Q Consensus 863 ----------~~gt~~y~a-PE~~~~~~~~~~~DvwslGvil~ell~g~~p~ 903 (1002)
.....++.. |+..... ....+.|++|.++|++.+|+.+|
T Consensus 238 ~~~~~~~~~~~l~~Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 238 EEYGMEFVSKILNHYKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TSCCHHHHHHHHHHHTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cccCHHHHHHHHHHcCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 000001111 2221111 12368999999999999998665
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.71 E-value=1.6e-10 Score=121.31 Aligned_cols=160 Identities=18% Similarity=0.153 Sum_probs=97.4
Q ss_pred CCccceeEEeCCCCeEEEEEcCC---CCcCCCCC-ccccCCCCCCEEeccCCCCCCCCC-CCccccCcccc--ccccccc
Q 001867 56 PCSWRGVECDPRSHSVASIDLSN---ANIAGPFP-SLLCRLENLTFLTLFNNSINSTLP-DDISACQNLQH--LDLSQNL 128 (1002)
Q Consensus 56 ~C~w~gv~C~~~~~~v~~l~L~~---~~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~--L~Ls~N~ 128 (1002)
.|.|.|+.|+....+|+.+...+ ..+.+.++ ..+..++. .|..++|.-++.++ +.|...+.|.. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 58999999998776776665543 22333332 22222221 22223333332222 12555666666 6777774
Q ss_pred cc---CCCCccccccCCccccccccccccC--CCCcccccccccceeeeccccccCcccccccccc--ccccccccCCCC
Q 001867 129 LT---GTLTPALADLPNLKFLDLTGNNFSG--DIPESFGRFQKLEVISLVYNLLDGTIPAFLGNIS--TLKMLNLSYNPF 201 (1002)
Q Consensus 129 l~---~~~~~~~~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~--~L~~L~Ls~N~~ 201 (1002)
.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 33 2222223567888888888888887 4556777888888888888888865 3344444 888889988886
Q ss_pred CCCCCCc-------ccCCCCccchhh
Q 001867 202 LPGRIPP-------ELGNLTNLEILW 220 (1002)
Q Consensus 202 ~~~~~p~-------~~~~l~~L~~L~ 220 (1002)
. +.+|. .+..+++|+.|+
T Consensus 233 ~-~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 233 C-DTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp G-GGCSSHHHHHHHHHHHCTTCCEES
T ss_pred c-cccCcchhHHHHHHHHCcccCeEC
Confidence 3 34442 356677777765
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.52 E-value=4.3e-07 Score=99.56 Aligned_cols=138 Identities=21% Similarity=0.214 Sum_probs=102.9
Q ss_pred CCCcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC----Ccee
Q 001867 684 GLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH----KNIV 759 (1002)
Q Consensus 684 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv 759 (1002)
.+...+.++.|..+.||++ ++.+++|+... ......+.+|..+++.+.+ ..+.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~-------------------~~~~~~~~~E~~~L~~L~~~~~~~~vP 94 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR-------------------DSVRISQKRELELYRFLENCKLSYQIP 94 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS-------------------HHHHHHHHHHHHHHHHHTTSCCSSBCC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc-------------------HHHHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 4555678999999999998 67788887521 1224558899999888865 2244
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCC--------------------
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCV-------------------- 819 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-------------------- 819 (1002)
+++++ +..++||||++|.++.+... ..++..+...++.+++..++.||+...
T Consensus 95 ~v~~~----~~~~lvme~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~ 166 (320)
T 3r70_A 95 AVVYQ----SDRFNIMKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQ 166 (320)
T ss_dssp CEEEE----CSSCEEEECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHH
T ss_pred eEEec----CCcEEEEeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHH
Confidence 55554 56789999999988864332 236777788888899999998885421
Q ss_pred ----------------------------------------CCeeeCCCCCCcEEECCCCCeEEccccCccccc
Q 001867 820 ----------------------------------------PSIVHRDVKSNNILLDGDFGARVADFGVAKVVD 852 (1002)
Q Consensus 820 ----------------------------------------~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~ 852 (1002)
+.++|+|++|.||+++.++.+.|+||+.+....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 167 DKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 245999999999999986667999999987544
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.46 E-value=1.5e-08 Score=106.39 Aligned_cols=16 Identities=31% Similarity=0.268 Sum_probs=6.7
Q ss_pred cccEEeCcceeeeccc
Q 001867 550 VLNYLDLSNNRLSGRI 565 (1002)
Q Consensus 550 ~L~~L~Ls~N~l~~~i 565 (1002)
+|++|+|++|.+++.+
T Consensus 221 ~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 221 KLEELWLDGNSLCDTF 236 (267)
T ss_dssp CCSEEECTTSTTGGGC
T ss_pred CcceEEccCCcCcccc
Confidence 3444444444444333
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=3.6e-08 Score=98.57 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=47.1
Q ss_pred ccCCcccEEEccCC-cCCCC----CccccccccccccccccccccCCC----CcccccccccCCeeecCCCcCCcc----
Q 001867 450 AGAANLSLLIISKN-NLSGS----LPEEIGFLKSLVVLSGSENKFTGS----LPESLTNLAELGSLDLHANDLSGE---- 516 (1002)
Q Consensus 450 ~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 516 (1002)
...++|+.|+|++| .+... +...+...++|+.|+|++|+|+.. +...+...+.|++|+|++|.|++.
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 33444555555554 44321 112222334444455555544321 122233334555555555555432
Q ss_pred cccccccccccccccc--cCcccccC----CCCCccccccccEEeCcceee
Q 001867 517 LPSSVSSWKKLNELNL--ADNLFYGN----IPEDIGNLSVLNYLDLSNNRL 561 (1002)
Q Consensus 517 ~p~~~~~l~~L~~L~L--s~N~l~~~----ip~~~~~l~~L~~L~Ls~N~l 561 (1002)
+...+...+.|++|+| ++|.|+.. +.+.+...++|++|+|++|++
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2233333444444555 44444422 122223334455555555544
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.31 E-value=2.5e-06 Score=90.98 Aligned_cols=135 Identities=18% Similarity=0.142 Sum_probs=99.2
Q ss_pred eeeecCCc-cEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCceeeeeeEEe
Q 001867 690 VIGSGSSG-KVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIVKLWCCCT 766 (1002)
Q Consensus 690 ~LG~G~fg-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 766 (1002)
.+..|..| .||+.... ++..+.+|+-. ......+.+|..+++.+. +--+.++++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~--------------------~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~ 90 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGK--------------------GSVANDVTDEMVRLNWLTAFMPLPTIKHFIR 90 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEE--------------------THHHHHHHHHHHHHHHHTTTSCCCCEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECC--------------------CCCHhHHHHHHHHHHHhccCCCcCeEEEEEE
Confidence 45566666 58998754 46678899752 223456888999998875 334778899999
Q ss_pred cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------
Q 001867 767 TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDC---------------------------- 818 (1002)
Q Consensus 767 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---------------------------- 818 (1002)
+.+..++|||+++|.++.+..... ......++.+++..|+.||+..
T Consensus 91 ~~~~~~lvme~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (272)
T 4gkh_A 91 TPDDAWLLTTAIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA 164 (272)
T ss_dssp ETTEEEEEEECCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCG
T ss_pred ECCeEEEEEEeeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhh
Confidence 999999999999998887765421 1234456777778888887530
Q ss_pred ---------------------------CCCeeeCCCCCCcEEECCCCCeEEccccCccc
Q 001867 819 ---------------------------VPSIVHRDVKSNNILLDGDFGARVADFGVAKV 850 (1002)
Q Consensus 819 ---------------------------~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~ 850 (1002)
.+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 165 SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp GGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12478999999999999777677999998864
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27 E-value=5.2e-06 Score=90.13 Aligned_cols=137 Identities=18% Similarity=0.179 Sum_probs=98.4
Q ss_pred CCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC---ceeeeeeE
Q 001867 688 DNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK---NIVKLWCC 764 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~ 764 (1002)
.+.++.|....||++ ++.++||+.. .......+.+|+.+++.+.+. .+.+++.+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~-------------------~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~ 80 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK-------------------SQQGADELNKEIQLLPLLVGCVKVNIPQYVYI 80 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES-------------------SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC-------------------CchHHHHHHHHHHHHHHHHhcCCCCCCCeEee
Confidence 456899999999998 5778888741 122356789999999998642 35666666
Q ss_pred Ee-cCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc--------------------------
Q 001867 765 CT-TRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHD-------------------------- 817 (1002)
Q Consensus 765 ~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------------------------- 817 (1002)
.. ..+..++||||++|..+.+..- ..++..+...++.+++..|+.||+.
T Consensus 81 ~~~~~g~~~~v~e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~ 156 (306)
T 3tdw_A 81 GKRSDGNPFVGYRKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAV 156 (306)
T ss_dssp EECTTSCEEEEEECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHH
T ss_pred cccCCCceEEEEeccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHH
Confidence 64 4566789999999988876321 1245566666677777777766653
Q ss_pred -------------------------------CCCCeeeCCCCCCcEEECC---CCCe-EEccccCcccc
Q 001867 818 -------------------------------CVPSIVHRDVKSNNILLDG---DFGA-RVADFGVAKVV 851 (1002)
Q Consensus 818 -------------------------------~~~~iiHrDlk~~NIll~~---~~~~-kl~DfGl~~~~ 851 (1002)
..+.++|+|++|.||+++. ++.+ .|+||+.+..-
T Consensus 157 ~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 157 EDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1225699999999999987 4554 89999988653
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.27 E-value=2.7e-06 Score=91.18 Aligned_cols=75 Identities=20% Similarity=0.192 Sum_probs=58.3
Q ss_pred CCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC---ceeeeeeE
Q 001867 688 DNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK---NIVKLWCC 764 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~ 764 (1002)
.+.||.|.++.||++...+|+.++||+.... .......+..|++.++.+.+. .+++++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~-----------------~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~ 82 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDD-----------------APALDGLFRAEALGLDWLGRSFGSPVPQVAGW 82 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTT-----------------CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCC-----------------CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEe
Confidence 4679999999999999888999999985211 111235689999999999764 57778776
Q ss_pred EecCCeeeEEEeccCCCCh
Q 001867 765 CTTRDCKLLVYEYMPNGSL 783 (1002)
Q Consensus 765 ~~~~~~~~lv~e~~~~g~L 783 (1002)
. ..++||||++++.+
T Consensus 83 ~----~~~lvme~l~g~~~ 97 (288)
T 3d1u_A 83 D----DRTLAMEWVDERPP 97 (288)
T ss_dssp E----TTEEEEECCCCCCC
T ss_pred c----CcEEEEEecccCCC
Confidence 3 36899999999875
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.26 E-value=9.5e-08 Score=95.43 Aligned_cols=119 Identities=15% Similarity=0.109 Sum_probs=60.8
Q ss_pred cCcCCCCCcEEEccCc-cccCCCCCcCCCCCcceEEEcccCcccCccccccccCCcccEEEccCCcCCCC----Cccccc
Q 001867 400 GLGHCQSLTRVRLGYN-RLTGKVPPLLWGLPHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNNLSGS----LPEEIG 474 (1002)
Q Consensus 400 ~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~ 474 (1002)
.+...++|++|+|++| .+...... .+...+...++|+.|+|++|++... +.+.+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~--------------------~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~ 90 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLK--------------------ACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLK 90 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHH--------------------HHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHH--------------------HHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHH
Confidence 3455667777777777 66521111 1112223334445555555544321 122233
Q ss_pred cccccccccccccccCCC----CcccccccccCCeeec--CCCcCCccc----ccccccccccccccccCcccc
Q 001867 475 FLKSLVVLSGSENKFTGS----LPESLTNLAELGSLDL--HANDLSGEL----PSSVSSWKKLNELNLADNLFY 538 (1002)
Q Consensus 475 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~ 538 (1002)
..++|+.|+|++|.|+.. +...+...+.|++|+| ++|.|+... ...+...++|+.|+|++|.+.
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334555555665555532 2344555566777777 667666442 233444466777777777664
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.09 E-value=8.2e-06 Score=90.67 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=89.5
Q ss_pred cCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc--eeeeeeE
Q 001867 687 EDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN--IVKLWCC 764 (1002)
Q Consensus 687 ~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~ 764 (1002)
..+.++.|....+|++.. +++.+++|+... ...+..|+.+++.+.... +.+++++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~----------------------~~~~~~E~~~l~~L~~~gvpvP~vl~~ 101 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSC----------------------ADGFYKDRYVYRHFASAALPIPEVLDI 101 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESC----------------------CHHHHHHHHHHHHHCCSSSCCCCEEEE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCc----------------------hhhHHHHHHHHHHHHhcCCCCceEEEe
Confidence 356789999999999876 578899997511 124888999998886433 5677777
Q ss_pred EecC-CeeeEEEeccCCCChhhh------------------hhhcCCC---------------CCCHHHH----------
Q 001867 765 CTTR-DCKLLVYEYMPNGSLGDL------------------LHSCKGG---------------LLDWPTR---------- 800 (1002)
Q Consensus 765 ~~~~-~~~~lv~e~~~~g~L~~~------------------l~~~~~~---------------~l~~~~~---------- 800 (1002)
.... +..|+||||++|.++.+. ++..... .-+|...
T Consensus 102 ~~~~~g~~~lv~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~ 181 (362)
T 3ovc_A 102 GEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVY 181 (362)
T ss_dssp EESSSSCEEEEEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTC
T ss_pred ccCCCCCeEEEEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHH
Confidence 7654 678999999998665421 0110000 0001111
Q ss_pred -----------HHHHHHHHHHHHHHhhc-CCCCeeeCCCCCCcEEECCCCCeEEccccCccccc
Q 001867 801 -----------YKIIVDAAEGLSYLHHD-CVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVD 852 (1002)
Q Consensus 801 -----------~~i~~qi~~~L~~LH~~-~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~ 852 (1002)
......+....+++... ..+.++|+|+.+.||+++.++.+.|+||+.+..-+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 182 HWQTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp CHHHHCCTTTHHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHhhcccccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 00111111222233211 11478999999999999877778899999987643
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.01 E-value=8.5e-06 Score=90.70 Aligned_cols=83 Identities=10% Similarity=0.083 Sum_probs=55.2
Q ss_pred Cee-eecCCccEEEEEEc-------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-C--Cc
Q 001867 689 NVI-GSGSSGKVYKVVLS-------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-H--KN 757 (1002)
Q Consensus 689 ~~L-G~G~fg~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~n 757 (1002)
+.| +.|..+.+|++... +++.+++|+...... . .......+.+|+.+++.+. + -.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~-------------~-~~~~~~~~~~E~~~l~~L~~~~~vp 91 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAED-------------V-PVFPTYRLDHQFEVIRLVGELTDVP 91 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGG-------------C-CSSSCCCHHHHHHHHHHHHHHCCSC
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCc-------------c-ccCchhHHHHHHHHHHHHhhcCCCC
Confidence 567 88889999998764 267788887522100 0 0001245788888888874 3 35
Q ss_pred eeeeeeEEecC---CeeeEEEeccCCCChhh
Q 001867 758 IVKLWCCCTTR---DCKLLVYEYMPNGSLGD 785 (1002)
Q Consensus 758 iv~l~~~~~~~---~~~~lv~e~~~~g~L~~ 785 (1002)
+.+++++..+. +..|+||||++|..+.+
T Consensus 92 vP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 92 VPRVRWIETTGDVLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp CCCEEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred CCcEEEEccCCCccCCceEEEEecCCCChhh
Confidence 67788877655 45689999999877654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.78 E-value=9.2e-05 Score=81.67 Aligned_cols=30 Identities=27% Similarity=0.426 Sum_probs=27.3
Q ss_pred CCeeeCCCCCCcEEECCCCCeEEccccCcc
Q 001867 820 PSIVHRDVKSNNILLDGDFGARVADFGVAK 849 (1002)
Q Consensus 820 ~~iiHrDlk~~NIll~~~~~~kl~DfGl~~ 849 (1002)
..++|||+++.||+++.++.+.++||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 489999999999999888899999999775
No 425
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.77 E-value=0.00012 Score=78.95 Aligned_cols=137 Identities=19% Similarity=0.207 Sum_probs=92.0
Q ss_pred CCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC---CCceeeeeeE
Q 001867 688 DNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR---HKNIVKLWCC 764 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~ 764 (1002)
.+.|+.|....+|++.. +++.++||+... .....+..|...++.+. ...+++++++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~--------------------~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~ 99 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINER--------------------SYRSMFRAEADQLALLAKTNSINVPLVYGI 99 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEG--------------------GGHHHHHHHHHHHHHHHHTTSSBCCCEEEE
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCc--------------------ccHHHHHHHHHHHHHHHhhCCCCcceEEEE
Confidence 46789999999999886 467888997621 12566889999998884 3668889998
Q ss_pred EecCCeeeEEEeccCCCChhh-----------hhhhcCC-C-------------------CCCHHHHH---HHHH-----
Q 001867 765 CTTRDCKLLVYEYMPNGSLGD-----------LLHSCKG-G-------------------LLDWPTRY---KIIV----- 805 (1002)
Q Consensus 765 ~~~~~~~~lv~e~~~~g~L~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~~----- 805 (1002)
....+..++||||+++..+.. .++.... . .-+|.... ++..
T Consensus 100 ~~~~g~~~lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a 179 (312)
T 3jr1_A 100 GNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQIC 179 (312)
T ss_dssp EECSSEEEEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHH
T ss_pred eecCCceEEEEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 888888999999999876521 1222111 0 12454332 1111
Q ss_pred -----------HHHHH-HHHHhh-cCCCCeeeCCCCCCcEEECCCCCeEEcccc
Q 001867 806 -----------DAAEG-LSYLHH-DCVPSIVHRDVKSNNILLDGDFGARVADFG 846 (1002)
Q Consensus 806 -----------qi~~~-L~~LH~-~~~~~iiHrDlk~~NIll~~~~~~kl~DfG 846 (1002)
+++.. ...|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 180 ~~~g~~~~~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 180 KEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTCCCSCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHcCCChHHHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 123432 1246899999999999999887 8899974
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.63 E-value=0.00015 Score=81.71 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=49.2
Q ss_pred CCeeeecCCccEEEEEEc-CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCC--Cc-eeeeee
Q 001867 688 DNVIGSGSSGKVYKVVLS-NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRH--KN-IVKLWC 763 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~n-iv~l~~ 763 (1002)
.+.+|.|.++.||++... +++.++||....... +.. . ......+++..|.++++.+.. |. +.+++.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r--------~~~-~-~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~ 104 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAK--------VVG-E-SWPLTIDRARIESSALIRQGEHVPHLVPRVFY 104 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-----------------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhc--------ccC-C-CCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE
Confidence 457899999999999753 468899998632110 000 0 001123456778888887742 33 445554
Q ss_pred EEecCCeeeEEEeccCCC
Q 001867 764 CCTTRDCKLLVYEYMPNG 781 (1002)
Q Consensus 764 ~~~~~~~~~lv~e~~~~g 781 (1002)
+ +.+..++||||+++.
T Consensus 105 ~--d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 105 S--DTEMAVTVMEDLSHL 120 (397)
T ss_dssp E--ETTTTEEEECCCTTS
T ss_pred E--cCCccEEEEEeCCCc
Confidence 3 344568999999764
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.48 E-value=0.00034 Score=75.00 Aligned_cols=77 Identities=19% Similarity=0.182 Sum_probs=53.8
Q ss_pred CcCCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-C--Cceeeee
Q 001867 686 DEDNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-H--KNIVKLW 762 (1002)
Q Consensus 686 ~~~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~ 762 (1002)
.-.+.+|.|..+.||++...||+.|.||+.... .......|..|+..|+.+. . --+++++
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~-----------------~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~ 80 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD-----------------APALDGLFRAEALGLDWLGRSFGSPVPQVA 80 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT-----------------CCCCTTHHHHHHHHHHHHTCSTTCCSCCEE
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCC-----------------CcchhhHHHHHHHHHHHHHhhCCCCcceEE
Confidence 335678999999999999999999999975221 1112345788999998874 2 2344555
Q ss_pred eEEecCCeeeEEEeccCCCCh
Q 001867 763 CCCTTRDCKLLVYEYMPNGSL 783 (1002)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~g~L 783 (1002)
++. ..++||||++++..
T Consensus 81 ~~~----~~~lv~e~l~~~~~ 97 (288)
T 3f7w_A 81 GWD----DRTLAMEWVDERPP 97 (288)
T ss_dssp EEE----TTEEEEECCCCCCC
T ss_pred ecc----CceEEEEeecccCC
Confidence 542 24799999987654
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.47 E-value=1.8e-05 Score=76.81 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=36.8
Q ss_pred ccccccccccccCCCCccccccCCcccccccccc-ccCCCCcccccc----cccceeeecccc-ccCccccccccccccc
Q 001867 119 LQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNN-FSGDIPESFGRF----QKLEVISLVYNL-LDGTIPAFLGNISTLK 192 (1002)
Q Consensus 119 L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~L~ 192 (1002)
|++|||+++.|+...-..+.++++|++|+|++|. |+..--..++.+ ++|++|+|++|. |+..--..+.++++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 4444444444433322334445555555555552 332211223322 246666666553 4433333445555666
Q ss_pred cccccCCC
Q 001867 193 MLNLSYNP 200 (1002)
Q Consensus 193 ~L~Ls~N~ 200 (1002)
+|+|+++.
T Consensus 143 ~L~L~~c~ 150 (176)
T 3e4g_A 143 YLFLSDLP 150 (176)
T ss_dssp EEEEESCT
T ss_pred EEECCCCC
Confidence 66665553
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.34 E-value=5.4e-05 Score=73.40 Aligned_cols=83 Identities=16% Similarity=0.113 Sum_probs=38.8
Q ss_pred CcceEEEcccCcccCccccccccCCcccEEEccCCc-CCCCCccccccc----cccccccccccc-cCCCCccccccccc
Q 001867 429 PHVYLLELTDNFLSGEISKNIAGAANLSLLIISKNN-LSGSLPEEIGFL----KSLVVLSGSENK-FTGSLPESLTNLAE 502 (1002)
Q Consensus 429 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 502 (1002)
..|+.||++++.|+...-..+.++++|+.|+|+++. ++..--..++.+ ++|+.|+|++|. +|..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 345566666665555444455556666666666653 432211222222 234555555442 44222223344444
Q ss_pred CCeeecCCC
Q 001867 503 LGSLDLHAN 511 (1002)
Q Consensus 503 L~~L~Ls~N 511 (1002)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555444
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.17 E-value=0.0015 Score=74.09 Aligned_cols=78 Identities=14% Similarity=0.049 Sum_probs=48.3
Q ss_pred CCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccC---CCCCccchhhHHHHHHHH
Q 001867 820 PSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTL---RVNEKSDIYSFGVVILEL 896 (1002)
Q Consensus 820 ~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~el 896 (1002)
+.++|+|++|.||+++.++ ++++||+.+..-......... ...-...|++|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAY-LGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHH-HHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHH-HHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3899999999999998776 999999998754322110000 00011346666654321 112234556788888887
Q ss_pred HhC
Q 001867 897 VTG 899 (1002)
Q Consensus 897 l~g 899 (1002)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.09 E-value=0.0014 Score=70.62 Aligned_cols=129 Identities=13% Similarity=0.093 Sum_probs=75.2
Q ss_pred CCeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce-eeeeeEEe
Q 001867 688 DNVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI-VKLWCCCT 766 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~ 766 (1002)
.+.|+.|....+|++ +.+++|+..... .......+|+.+++.+...++ .+++++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~------------------~~~~~r~~E~~~l~~l~~~g~~P~~~~~~- 78 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGT------------------EEYINRANEAVAAREAAKAGVSPEVLHVD- 78 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----------------------CCCHHHHHHHHHHHHHTTSSCCEEEEC-
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCc------------------cceeCHHHHHHHHHHHHHcCCCCceEEEE-
Confidence 678999999999998 568888763210 011223567777777642222 4555443
Q ss_pred cCCeeeEEEecc-CCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc----------------------------
Q 001867 767 TRDCKLLVYEYM-PNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHD---------------------------- 817 (1002)
Q Consensus 767 ~~~~~~lv~e~~-~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---------------------------- 817 (1002)
.+.-++++||+ +|.++...-... ...++.++++.|+-||+.
T Consensus 79 -~~~~~~v~e~i~~g~~l~~~~~~~---------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (301)
T 3dxq_A 79 -PATGVMVTRYIAGAQTMSPEKFKT---------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTL 148 (301)
T ss_dssp -TTTCCEEEECCTTCEECCHHHHHH---------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCC
T ss_pred -CCCCEEEEeecCCCccCCHhhHhh---------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCc
Confidence 33347899999 654443210000 001122222222222221
Q ss_pred ----------------------CCCCeeeCCCCCCcEEECCCCCeEEccccCcccc
Q 001867 818 ----------------------CVPSIVHRDVKSNNILLDGDFGARVADFGVAKVV 851 (1002)
Q Consensus 818 ----------------------~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~ 851 (1002)
....++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 149 ~~~~~~l~~~~~~l~~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 149 PAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CTTHHHHHHHHHHHHHHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 1236899999999999 55678899999988754
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.07 E-value=0.0014 Score=71.86 Aligned_cols=33 Identities=33% Similarity=0.371 Sum_probs=28.2
Q ss_pred CCeeeCCCCCCcEEECCC----CCeEEccccCccccc
Q 001867 820 PSIVHRDVKSNNILLDGD----FGARVADFGVAKVVD 852 (1002)
Q Consensus 820 ~~iiHrDlk~~NIll~~~----~~~kl~DfGl~~~~~ 852 (1002)
..++|||+.+.||+++.+ +.+.++||+.+..-.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 489999999999999874 678999999887543
No 433
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.75 E-value=0.002 Score=73.01 Aligned_cols=72 Identities=19% Similarity=0.219 Sum_probs=48.0
Q ss_pred CeeeecCCccEEEEEEcC--------CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCcee
Q 001867 689 NVIGSGSSGKVYKVVLSN--------GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIV 759 (1002)
Q Consensus 689 ~~LG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 759 (1002)
+.|+.|....||++...+ ++.+.+|+.... ...+.+..|..+++.+. +.-..
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-------------------~~~~~li~E~~~l~~L~~~g~~P 139 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-------------------ETESHLVAESVIFTLLSERHLGP 139 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-------------------CCHHHHHHHHHHHHHHHHTTSSS
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-------------------CcHHHHHHHHHHHHHHHhCCCCC
Confidence 568889999999998753 478899876210 01134557888888875 32235
Q ss_pred eeeeEEecCCeeeEEEeccCCCCh
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSL 783 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L 783 (1002)
++++.+.+ .+|+||++|.++
T Consensus 140 ~l~~~~~~----g~v~e~l~G~~l 159 (429)
T 1nw1_A 140 KLYGIFSG----GRLEEYIPSRPL 159 (429)
T ss_dssp CEEEEETT----EEEECCCCEEEC
T ss_pred cEEEEeCC----CEEEEEeCCccc
Confidence 67766542 389999986444
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.70 E-value=0.0079 Score=65.46 Aligned_cols=141 Identities=13% Similarity=0.161 Sum_probs=80.7
Q ss_pred CeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCC--ceeeeeeE--
Q 001867 689 NVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHK--NIVKLWCC-- 764 (1002)
Q Consensus 689 ~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-- 764 (1002)
+.++ |....||++...+|+.+++|+.... ....+.+..|..+++.+... .+++++..
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~------------------~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g 92 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPE------------------RWTADQILEEHQFALQLVNDEVPVAAPVAFNG 92 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTT------------------TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTT
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCC------------------CCCHHHHHHHHHHHHHHHHcCCeecceeecCC
Confidence 4566 8888999988777778999987321 01234567788888777421 24444443
Q ss_pred ---EecCCeeeEEEeccCCCChh-----hh---------hhhc-C------CCCCCHHHH----HHH-------------
Q 001867 765 ---CTTRDCKLLVYEYMPNGSLG-----DL---------LHSC-K------GGLLDWPTR----YKI------------- 803 (1002)
Q Consensus 765 ---~~~~~~~~lv~e~~~~g~L~-----~~---------l~~~-~------~~~l~~~~~----~~i------------- 803 (1002)
....+..+++|||++|..+. .+ ++.. . ....++... ..+
T Consensus 93 ~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 172 (328)
T 1zyl_A 93 QTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKA 172 (328)
T ss_dssp BSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHH
T ss_pred cEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHH
Confidence 12245668899999875432 10 1110 0 011222211 001
Q ss_pred --HHHHHHHHHHHhhc----CCCCeeeCCCCCCcEEECCCCCeEEccccCccc
Q 001867 804 --IVDAAEGLSYLHHD----CVPSIVHRDVKSNNILLDGDFGARVADFGVAKV 850 (1002)
Q Consensus 804 --~~qi~~~L~~LH~~----~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~ 850 (1002)
...+...++.+.+. ....++|+|+++.||+++ + .+.++||+.+..
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 173 AFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111122333221 223789999999999999 4 899999988764
No 435
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.69 E-value=0.011 Score=58.46 Aligned_cols=104 Identities=18% Similarity=0.152 Sum_probs=68.5
Q ss_pred CChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeCCCCCCcEEECCCCCeEEccccCcccccCCCCCccc
Q 001867 781 GSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDASGKPKSM 860 (1002)
Q Consensus 781 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~ 860 (1002)
-+|.+.|+. .+.+++++++|.++.|.+.+|.-.-.+.. . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 378898886 56789999999999999999877622100 1 1223447899999999888764 1110
Q ss_pred ccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCC
Q 001867 861 SVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPV 903 (1002)
Q Consensus 861 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~ 903 (1002)
.....+.|||... ...+.+.=|||+|+++|..+--..|-
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 0122466888753 34567889999999999999755554
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.66 E-value=0.0032 Score=68.46 Aligned_cols=142 Identities=13% Similarity=0.172 Sum_probs=78.9
Q ss_pred CeeeecCCccEEEEEEcCCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc--eeeeeeE--
Q 001867 689 NVIGSGSSGKVYKVVLSNGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN--IVKLWCC-- 764 (1002)
Q Consensus 689 ~~LG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~-- 764 (1002)
+.|+.|....+|++...+| .+++|+.... ...+.+..|+.+++.+.... +.+++..
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-------------------~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~ 87 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-------------------VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKD 87 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----------------------CCHHHHHHHHHHHHHHTTCCCCCBCCBTT
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-------------------CCHHHHHHHHHHHHHHHHCCCCCCcccCCCC
Confidence 4577788899999987655 6788887321 12234666777777764212 3333321
Q ss_pred ----EecCCeeeEEEeccCCCChhh--------------hhhhcC-C--CC----C---CHHHHHH------------HH
Q 001867 765 ----CTTRDCKLLVYEYMPNGSLGD--------------LLHSCK-G--GL----L---DWPTRYK------------II 804 (1002)
Q Consensus 765 ----~~~~~~~~lv~e~~~~g~L~~--------------~l~~~~-~--~~----l---~~~~~~~------------i~ 804 (1002)
....+..+++|+|++|..+.. -++... . .+ . .|...+. +.
T Consensus 88 g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~ 167 (322)
T 2ppq_A 88 GELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLR 167 (322)
T ss_dssp CCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHH
T ss_pred CCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhH
Confidence 123456789999998865421 011110 0 00 1 1222110 00
Q ss_pred HHHHHHHHHHhhc----CCCCeeeCCCCCCcEEECCCCCeEEccccCccc
Q 001867 805 VDAAEGLSYLHHD----CVPSIVHRDVKSNNILLDGDFGARVADFGVAKV 850 (1002)
Q Consensus 805 ~qi~~~L~~LH~~----~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~ 850 (1002)
..+...++++++. ...+++|+|+.+.||+++.++.+.++||+.+..
T Consensus 168 ~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 168 EEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 1134445555532 124899999999999998775568999997753
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.52 E-value=0.0054 Score=67.85 Aligned_cols=140 Identities=15% Similarity=0.173 Sum_probs=83.8
Q ss_pred CeeeecCCccEEEEEEc--------CCcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCcee
Q 001867 689 NVIGSGSSGKVYKVVLS--------NGEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIV 759 (1002)
Q Consensus 689 ~~LG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 759 (1002)
+.+..|-...+|++... +++.|.+|+.-. .......+.+|..+++.+. +.-..
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~------------------~~~~~~~~~rE~~vl~~L~~~gv~P 117 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA------------------ILQGVDSLVLESVMFAILAERSLGP 117 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---------------------CCHHHHHHHHHHHHHHHHTTSSC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC------------------ccchHHHHHHHHHHHHHHHhcCCCC
Confidence 56778899999999864 247888887511 0112345668999998874 33346
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhhh-----------------hhhcC---CCCCC--HHHHHHHHHHHHH--------
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGDL-----------------LHSCK---GGLLD--WPTRYKIIVDAAE-------- 809 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~~-----------------l~~~~---~~~l~--~~~~~~i~~qi~~-------- 809 (1002)
++++++.+ .+||||++|.++..- ++... .+... +.++.++..++..
T Consensus 118 ~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~ 193 (379)
T 3feg_A 118 QLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPE 193 (379)
T ss_dssp CEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCS
T ss_pred eEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccch
Confidence 67766654 299999998655321 11100 11222 4566666655422
Q ss_pred -----------HHHHHh----hc-CCCCeeeCCCCCCcEEECCC----CCeEEccccCccc
Q 001867 810 -----------GLSYLH----HD-CVPSIVHRDVKSNNILLDGD----FGARVADFGVAKV 850 (1002)
Q Consensus 810 -----------~L~~LH----~~-~~~~iiHrDlk~~NIll~~~----~~~kl~DfGl~~~ 850 (1002)
.+..|. .. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 194 ~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 194 MNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp CCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 223332 21 22378999999999999876 6899999998864
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.47 E-value=0.00039 Score=68.70 Aligned_cols=17 Identities=18% Similarity=0.112 Sum_probs=9.0
Q ss_pred ccccccccEEeCcceee
Q 001867 545 IGNLSVLNYLDLSNNRL 561 (1002)
Q Consensus 545 ~~~l~~L~~L~Ls~N~l 561 (1002)
+..-+.|+.|+|+.|..
T Consensus 153 L~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 153 IEENESLLRVGISFASM 169 (197)
T ss_dssp HHHCSSCCEEECCCCCH
T ss_pred HHhCCCcCeEeccCCCc
Confidence 33345566666665543
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.45 E-value=0.008 Score=68.40 Aligned_cols=74 Identities=18% Similarity=0.136 Sum_probs=47.0
Q ss_pred CCeeeecCCccEEEEEEcC-CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCce-eeeeeEE
Q 001867 688 DNVIGSGSSGKVYKVVLSN-GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNI-VKLWCCC 765 (1002)
Q Consensus 688 ~~~LG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~ 765 (1002)
.+.|+.|-...+|++...+ ++.+++|+..... ... .+...|..+++.+...++ .++++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~------------~~~------idR~~E~~vl~~L~~~gl~P~ll~~~ 174 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT------------DEI------INREREKKISCILYNKNIAKKIYVFF 174 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C------------CSC------SCHHHHHHHHHHHTTSSSBCCEEEEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh------------hhh------cCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 3578889999999998764 4788888762210 001 113578888888864334 5677766
Q ss_pred ecCCeeeEEEeccCCCCh
Q 001867 766 TTRDCKLLVYEYMPNGSL 783 (1002)
Q Consensus 766 ~~~~~~~lv~e~~~~g~L 783 (1002)
. + ..||||++|.++
T Consensus 175 ~-~---G~v~e~I~G~~l 188 (458)
T 2qg7_A 175 T-N---GRIEEFMDGYAL 188 (458)
T ss_dssp T-T---EEEEECCCSEEC
T ss_pred C-C---eEEEEeeCCccC
Confidence 3 2 359999987544
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.45 E-value=0.00044 Score=68.33 Aligned_cols=60 Identities=15% Similarity=0.195 Sum_probs=30.0
Q ss_pred cccccccccCcccccC----CCCCccccccccEEeCcce---eeecc----cCCccc-ccccceEEeccccC
Q 001867 525 KKLNELNLADNLFYGN----IPEDIGNLSVLNYLDLSNN---RLSGR----IPVGLQ-NLKLNQLNVSNNRL 584 (1002)
Q Consensus 525 ~~L~~L~Ls~N~l~~~----ip~~~~~l~~L~~L~Ls~N---~l~~~----ip~~~~-~l~L~~l~ls~N~l 584 (1002)
+.|+.|+|++|.|+.. +-+.+..-+.|++|+|++| .+... +-..+. +-+|..|+++.|..
T Consensus 98 ~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 98 PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 3444444444444421 2233444456777888755 33322 222222 12688888887754
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.44 E-value=0.0025 Score=58.77 Aligned_cols=35 Identities=26% Similarity=0.220 Sum_probs=15.6
Q ss_pred cccccccCcccccCCCCCccccccccEEeCcceee
Q 001867 527 LNELNLADNLFYGNIPEDIGNLSVLNYLDLSNNRL 561 (1002)
Q Consensus 527 L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l 561 (1002)
|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444422223344444555555555543
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.38 E-value=0.0054 Score=56.51 Aligned_cols=56 Identities=20% Similarity=0.262 Sum_probs=33.9
Q ss_pred EEEcCCCCcC-CCCCccccCCCCCCEEeccCCCCCCCCCCCccccCccccccccccccc
Q 001867 73 SIDLSNANIA-GPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNLLT 130 (1002)
Q Consensus 73 ~l~L~~~~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 130 (1002)
.+|.++++++ ..+|..+. ++|++|+|++|+|+.+.++.|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5777777776 23443222 25667777777776655556666666666666666543
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.28 E-value=0.0086 Score=66.47 Aligned_cols=73 Identities=15% Similarity=0.112 Sum_probs=42.9
Q ss_pred CeeeecCCccEEEEEEcC---------CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCc-e
Q 001867 689 NVIGSGSSGKVYKVVLSN---------GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKN-I 758 (1002)
Q Consensus 689 ~~LG~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-i 758 (1002)
+.++.|....+|++...+ ++.+++|+..... ....+...|..+++.+...+ +
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~------------------~~~~~~~~E~~~l~~L~~~g~~ 100 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV------------------DELYNTISEFEVYKTMSKYKIA 100 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG------------------GGTSCHHHHHHHHHHHHHTTSS
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc------------------cceecHHHHHHHHHHHHhcCCC
Confidence 467888889999998653 2688888763210 00112467888888775223 4
Q ss_pred eeeeeEEecCCeeeEEEeccCCCCh
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSL 783 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L 783 (1002)
.++++.. . -++||||++|..+
T Consensus 101 P~~~~~~--~--~~~v~e~i~G~~l 121 (369)
T 3c5i_A 101 PQLLNTF--N--GGRIEEWLYGDPL 121 (369)
T ss_dssp CCEEEEE--T--TEEEEECCCSEEC
T ss_pred CceEEec--C--CcEEEEEecCCcC
Confidence 4666554 2 2689999987543
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.22 E-value=0.023 Score=62.10 Aligned_cols=32 Identities=16% Similarity=0.353 Sum_probs=28.2
Q ss_pred CCeeeCCCCCCcEEECCCCCeEEccccCcccc
Q 001867 820 PSIVHRDVKSNNILLDGDFGARVADFGVAKVV 851 (1002)
Q Consensus 820 ~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~~ 851 (1002)
..++|+|+.+.||+++.++.+.++||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47999999999999998888999999887653
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.14 E-value=0.041 Score=61.06 Aligned_cols=154 Identities=19% Similarity=0.228 Sum_probs=84.5
Q ss_pred CeeeecCCccEEEEEEcC--------CcEEEEEEeeccccc-cccCCCccccccccchh----hHHhHHHHHHHHhcCC-
Q 001867 689 NVIGSGSSGKVYKVVLSN--------GEAVAVKKLWRGMSK-ECESGCDVEKGQVQDQV----QDDGFQAEVETLGKIR- 754 (1002)
Q Consensus 689 ~~LG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~- 754 (1002)
+.|..|-...+|++...+ ++.|.+++.-..... .|.. ......++. ..+....|..+++.+.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~----~~~~~idR~~~~~~~~~~~~E~~~l~~L~~ 133 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNK----EGSEQAQKENEFQGAEAMVLESVMFAILAE 133 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC---------------------------CHHHHHHHHHHHHHHH
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccc----cccchhhhhhhhccchhhHHHHHHHHHHHh
Confidence 467778889999988753 367888876321100 0000 000000110 1123446888888875
Q ss_pred CCceeeeeeEEecCCeeeEEEeccCCCChhh--h---------------hhhcC---CCCCC--HHHHHHHHHHHH----
Q 001867 755 HKNIVKLWCCCTTRDCKLLVYEYMPNGSLGD--L---------------LHSCK---GGLLD--WPTRYKIIVDAA---- 808 (1002)
Q Consensus 755 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~---~~~l~--~~~~~~i~~qi~---- 808 (1002)
+.-..++++++... +|+||++|-+|.. + ++... .+... +..+.++..++.
T Consensus 134 ~Gi~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~ 209 (401)
T 3f2s_A 134 RSLGPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKF 209 (401)
T ss_dssp TTSSCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCC
T ss_pred cCCCCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccC
Confidence 44456777776432 8999999755422 1 01100 11222 334555554332
Q ss_pred ------------------HHH----HHHhhc-CCCCeeeCCCCCCcEEECCC------CCeEEccccCccc
Q 001867 809 ------------------EGL----SYLHHD-CVPSIVHRDVKSNNILLDGD------FGARVADFGVAKV 850 (1002)
Q Consensus 809 ------------------~~L----~~LH~~-~~~~iiHrDlk~~NIll~~~------~~~kl~DfGl~~~ 850 (1002)
.-+ +++... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 210 TEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred cchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 22378899999999999876 7899999988753
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.66 E-value=0.1 Score=58.41 Aligned_cols=139 Identities=16% Similarity=0.194 Sum_probs=83.0
Q ss_pred CeeeecCCccEEEEEEcC--------CcEEEEEEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCC-CCcee
Q 001867 689 NVIGSGSSGKVYKVVLSN--------GEAVAVKKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIR-HKNIV 759 (1002)
Q Consensus 689 ~~LG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 759 (1002)
+.+..|-...+|++...+ ++.|++|+.-... ....+..+|..+++.+. +.-..
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t------------------~~~idR~~E~~~l~~L~~~gi~P 137 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV------------------GKFYDSKVELDVFRYLSNINIAP 137 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-------------------CCCCHHHHHHHHHHHHHTTSSC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc------------------chhcCHHHHHHHHHHHHhcCCCC
Confidence 467788899999998753 5788888752210 01123467888887774 33345
Q ss_pred eeeeEEecCCeeeEEEeccCCCChhh--h---------------hhh--c---------CCCCCCHHHHHHHHHHHH---
Q 001867 760 KLWCCCTTRDCKLLVYEYMPNGSLGD--L---------------LHS--C---------KGGLLDWPTRYKIIVDAA--- 808 (1002)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~--~---------~~~~l~~~~~~~i~~qi~--- 808 (1002)
++++.+. -+.||||++|..|.. + ++. . ...+--+.++.++..++-
T Consensus 138 ~l~~~~~----~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~ 213 (424)
T 3mes_A 138 NIIADFP----EGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQV 213 (424)
T ss_dssp CEEEEET----TEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEcC----CCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhh
Confidence 5665432 268999999865421 0 000 0 011112455544443332
Q ss_pred ----------------HHHHHHhh---------------------cCCCCeeeCCCCCCcEEECCCCCeEEccccCccc
Q 001867 809 ----------------EGLSYLHH---------------------DCVPSIVHRDVKSNNILLDGDFGARVADFGVAKV 850 (1002)
Q Consensus 809 ----------------~~L~~LH~---------------------~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl~~~ 850 (1002)
..+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 214 SKNNFQIDKELYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HTCC--CCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred cccchhhccccHHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22233321 11237899999999999 7788999999998864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.16 E-value=0.62 Score=51.87 Aligned_cols=30 Identities=27% Similarity=0.372 Sum_probs=25.2
Q ss_pred CeeeCCCCCCcEEE------CCCCCeEEccccCccc
Q 001867 821 SIVHRDVKSNNILL------DGDFGARVADFGVAKV 850 (1002)
Q Consensus 821 ~iiHrDlk~~NIll------~~~~~~kl~DfGl~~~ 850 (1002)
.++|+|+.+.||++ +++..++++||-+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 45799999999999 4566799999998864
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.43 E-value=3 Score=41.45 Aligned_cols=84 Identities=10% Similarity=-0.013 Sum_probs=61.1
Q ss_pred CCCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCCeeeCCCCCCcE
Q 001867 754 RHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLS-YLHHDCVPSIVHRDVKSNNI 832 (1002)
Q Consensus 754 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~-~LH~~~~~~iiHrDlk~~NI 832 (1002)
.||++ -...-.+++.+.+.++.-+++.=...++ ..+...+++++.+++.... +++.+ +|--++|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceE
Confidence 57887 3334466777667666654432222332 3788999999999998887 67765 7788999999
Q ss_pred EECCCCCeEEccccCcc
Q 001867 833 LLDGDFGARVADFGVAK 849 (1002)
Q Consensus 833 ll~~~~~~kl~DfGl~~ 849 (1002)
+++.++.+++.-.|+-.
T Consensus 116 ~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKE 132 (219)
T ss_dssp EECTTCCEEESCCEETT
T ss_pred EEeCCCcEEEEEcCCcc
Confidence 99999999998777644
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=81.69 E-value=0.4 Score=33.88 Aligned_cols=16 Identities=13% Similarity=0.146 Sum_probs=8.8
Q ss_pred HHHHHhhhheeeeeec
Q 001867 641 FVFGLVWFYLKYRKFK 656 (1002)
Q Consensus 641 ~~~~~v~~~~~~r~~~ 656 (1002)
++...+|+|+|+|+.+
T Consensus 26 ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 26 VVALGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHhhhhHhh
Confidence 3444556666666544
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.99 E-value=2.9 Score=41.30 Aligned_cols=122 Identities=9% Similarity=0.054 Sum_probs=79.6
Q ss_pred HHHHHhcCCCCceeeeeeEEecCCeeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeeC
Q 001867 746 EVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDAAEGLSYLHHDCVPSIVHR 825 (1002)
Q Consensus 746 E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHr 825 (1002)
|+..+.. .||+.+.. ..-.+++.+.+.++.-+ +..+|-.- +..+...+++++.+|+....+++.+ +|-
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf 103 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNRTR-----YTF 103 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGGSS-----EEC
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhcCc-----eEE
Confidence 3444433 58888866 45556666555555543 23333221 2378899999999999988777766 788
Q ss_pred CCCCCcEEECCCCCeEEccccCcccccCCCCCcccccccccccccCccccccCCCCCccchhhHHHHHHHHHhCCCCC
Q 001867 826 DVKSNNILLDGDFGARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPV 903 (1002)
Q Consensus 826 Dlk~~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell~g~~p~ 903 (1002)
-++|+||+++.++.+++.-.|+...+.+.. .+...=.-.+=+++..+++++..|
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l~P~~------------------------~~ee~fL~qyKAliiall~~K~~F 157 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVVDPLP------------------------VSEAEFLTRYKALVICAFNEKQSF 157 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTBSCCC------------------------CCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred EEecceEEEcCCCCEEEEEccCccCCCCCC------------------------CCHHHHHHHHHHHHHHHHcCCCCH
Confidence 899999999999999998777644332211 011111224557788888888877
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=68.71 E-value=0.72 Score=52.33 Aligned_cols=63 Identities=5% Similarity=-0.125 Sum_probs=18.5
Q ss_pred cCCeeeecCCccEEEEEEcC-CcEEEE------EEeeccccccccCCCccccccccchhhHHhHHHHHHHHhcCCCCcee
Q 001867 687 EDNVIGSGSSGKVYKVVLSN-GEAVAV------KKLWRGMSKECESGCDVEKGQVQDQVQDDGFQAEVETLGKIRHKNIV 759 (1002)
Q Consensus 687 ~~~~LG~G~fg~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 759 (1002)
+.+.|| ||.||+|.+.. ..+||| |....+ .........+.+|..+++..+|||++
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~---------------~~~~e~~~~~~rea~l~~~~~H~niv 207 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQD---------------GVSEKRLTSLVRRATLKENEQIPKYE 207 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC--------------------------------------------------C
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccc---------------cccccccccccccccccccccccccC
Confidence 456777 99999999753 357788 554221 11222344678889999999999999
Q ss_pred eeeeEEec
Q 001867 760 KLWCCCTT 767 (1002)
Q Consensus 760 ~l~~~~~~ 767 (1002)
+.+++...
T Consensus 208 ~~h~f~~~ 215 (463)
T 3cxl_A 208 KIHNFKVH 215 (463)
T ss_dssp BCCCEEEE
T ss_pred CCcceEEe
Confidence 99887753
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=66.82 E-value=1.1 Score=31.59 Aligned_cols=17 Identities=18% Similarity=0.167 Sum_probs=9.4
Q ss_pred HHHHHhhhheeeeeecC
Q 001867 641 FVFGLVWFYLKYRKFKN 657 (1002)
Q Consensus 641 ~~~~~v~~~~~~r~~~~ 657 (1002)
++...+|+|+|+|+.++
T Consensus 25 ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHhhhhhhhh
Confidence 33445566666665544
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=52.38 E-value=2.8 Score=28.63 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=12.4
Q ss_pred eehhhhhhHHHHHHHhhhheeee
Q 001867 631 RSIFILAGLVFVFGLVWFYLKYR 653 (1002)
Q Consensus 631 ~~~~~~~~l~~~~~~v~~~~~~r 653 (1002)
+++.++++++++.+++++++|+|
T Consensus 16 iVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 16 VIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eehHHHHHHHHHHHHHHHHeecC
Confidence 33444555555556666665543
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.93 E-value=46 Score=28.20 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=19.0
Q ss_pred CCCCCccccCcccccccccccccCCCCccccccCCcccccccc
Q 001867 108 TLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTG 150 (1002)
Q Consensus 108 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~~L~Ls~ 150 (1002)
+-..+|.+|.+|+.+.|..+ ++.+...+|.++.+|+.+.+.+
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344444555554444432 2323344455555555555443
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=35.40 E-value=87 Score=33.02 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=43.5
Q ss_pred eeeEEEeccCCCChhhhhhhcCCCCCCHHHHHHHHHHH--HHHHHHHhhcCCC-Cee-eCCCCCCcEEECCCCC-eEEcc
Q 001867 770 CKLLVYEYMPNGSLGDLLHSCKGGLLDWPTRYKIIVDA--AEGLSYLHHDCVP-SIV-HRDVKSNNILLDGDFG-ARVAD 844 (1002)
Q Consensus 770 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~qi--~~~L~~LH~~~~~-~ii-HrDlk~~NIll~~~~~-~kl~D 844 (1002)
..+++|||.+|..|.+.-...-...+.... +.++ +-++..+..+.+. +.+ +.--.+.||+++.++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 456999999876665432210001122222 2332 3356666655331 111 1225789999976554 88999
Q ss_pred ccCcccc
Q 001867 845 FGVAKVV 851 (1002)
Q Consensus 845 fGl~~~~ 851 (1002)
-+.+..-
T Consensus 232 hn~af~~ 238 (342)
T 1cja_A 232 SKIIPLD 238 (342)
T ss_dssp CCCCCCC
T ss_pred CCccccC
Confidence 9988653
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.27 E-value=72 Score=26.98 Aligned_cols=50 Identities=22% Similarity=0.205 Sum_probs=40.7
Q ss_pred CCCcCCCCCccccCCCCCCEEeccCCCCCCCCCCCccccCccccccccccc
Q 001867 78 NANIAGPFPSLLCRLENLTFLTLFNNSINSTLPDDISACQNLQHLDLSQNL 128 (1002)
Q Consensus 78 ~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 128 (1002)
+..++.+-..+|.++++|+.+.+-.+ ++.+-..+|.+|.+|+.+.+....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 44566666788999999999999875 566677899999999999997643
No 457
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=28.62 E-value=11 Score=26.54 Aligned_cols=14 Identities=36% Similarity=0.588 Sum_probs=5.9
Q ss_pred HHHHHh-hhheeeee
Q 001867 641 FVFGLV-WFYLKYRK 654 (1002)
Q Consensus 641 ~~~~~v-~~~~~~r~ 654 (1002)
++++++ .+|+|+|+
T Consensus 25 vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 25 VVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhheehhh
Confidence 333444 33444444
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=25.79 E-value=5.3e+02 Score=29.65 Aligned_cols=83 Identities=13% Similarity=0.122 Sum_probs=49.4
Q ss_pred eeeeeEEecCCeeeEEEeccCCCChhhhh----------hhcCCC-----CCCHHHHHHHHHHHHH--HHHHHhhcCCCC
Q 001867 759 VKLWCCCTTRDCKLLVYEYMPNGSLGDLL----------HSCKGG-----LLDWPTRYKIIVDAAE--GLSYLHHDCVPS 821 (1002)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l----------~~~~~~-----~l~~~~~~~i~~qi~~--~L~~LH~~~~~~ 821 (1002)
++.|.+........+ .|++++.++.+.+ ...... ...+..+..+++.+|- -+.|+=.-
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 455555555444433 4677664444443 321111 1234556666666543 24454432
Q ss_pred eeeCCCCCCcEEECCCCCeEEccccCcc
Q 001867 822 IVHRDVKSNNILLDGDFGARVADFGVAK 849 (1002)
Q Consensus 822 iiHrDlk~~NIll~~~~~~kl~DfGl~~ 849 (1002)
+|=.++|||++.+|++.=+|||.+.
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4667999999999999999999874
No 459
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=24.24 E-value=19 Score=25.15 Aligned_cols=24 Identities=25% Similarity=0.176 Sum_probs=11.6
Q ss_pred EEeeehhhhhhHHHHHHHhhhhee
Q 001867 628 WVLRSIFILAGLVFVFGLVWFYLK 651 (1002)
Q Consensus 628 ~~~~~~~~~~~l~~~~~~v~~~~~ 651 (1002)
|.++++.+++|+++...+++..+|
T Consensus 10 ~wiIi~s~l~GLllL~li~~~LwK 33 (42)
T 2k1a_A 10 IWWVLVGVLGGLLLLTILVLAMWK 33 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555665555544444333
No 460
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=20.89 E-value=22 Score=20.05 Aligned_cols=9 Identities=67% Similarity=1.675 Sum_probs=7.1
Q ss_pred CCCccceeE
Q 001867 55 SPCSWRGVE 63 (1002)
Q Consensus 55 ~~C~w~gv~ 63 (1002)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 369999975
Done!