Query 001869
Match_columns 1002
No_of_seqs 657 out of 4707
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 11:12:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001869.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001869hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0610 Putative serine/threon 100.0 7.2E-55 1.6E-59 466.2 26.7 336 643-978 50-415 (459)
2 KOG0605 NDR and related serine 100.0 5.1E-54 1.1E-58 473.9 26.7 320 665-990 137-478 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 6.7E-54 1.5E-58 456.4 23.2 283 666-978 22-304 (357)
4 KOG0616 cAMP-dependent protein 100.0 1.1E-52 2.5E-57 431.1 22.7 274 666-973 41-317 (355)
5 KOG0592 3-phosphoinositide-dep 100.0 3.4E-52 7.5E-57 458.4 23.4 287 667-975 71-358 (604)
6 KOG0575 Polo-like serine/threo 100.0 5.1E-51 1.1E-55 457.4 24.6 256 669-959 18-273 (592)
7 KOG0615 Serine/threonine prote 100.0 1.1E-51 2.5E-56 440.7 15.9 262 667-962 170-444 (475)
8 KOG0581 Mitogen-activated prot 100.0 3.7E-50 8E-55 427.8 22.7 263 664-963 74-343 (364)
9 KOG0694 Serine/threonine prote 100.0 1.2E-49 2.6E-54 450.7 23.9 288 665-984 364-653 (694)
10 KOG0593 Predicted protein kina 100.0 8.5E-48 1.8E-52 395.4 16.4 260 668-961 1-290 (396)
11 KOG0595 Serine/threonine-prote 100.0 1.3E-46 2.7E-51 403.3 23.7 259 668-961 9-274 (429)
12 KOG0588 Serine/threonine prote 100.0 1.6E-46 3.4E-51 421.1 21.7 264 668-967 11-275 (786)
13 KOG0591 NIMA (never in mitosis 100.0 5.1E-47 1.1E-51 386.0 11.6 257 667-951 17-281 (375)
14 KOG0690 Serine/threonine prote 100.0 3.4E-46 7.3E-51 385.3 17.0 290 665-987 164-456 (516)
15 KOG0597 Serine-threonine prote 100.0 3.9E-46 8.4E-51 409.3 18.2 256 669-961 2-257 (808)
16 KOG0033 Ca2+/calmodulin-depend 100.0 4.2E-47 9.1E-52 379.1 8.8 261 666-961 8-273 (355)
17 KOG0583 Serine/threonine prote 100.0 5E-45 1.1E-49 412.7 26.7 262 666-961 14-281 (370)
18 KOG0661 MAPK related serine/th 100.0 7.2E-46 1.6E-50 402.7 17.0 263 666-964 7-300 (538)
19 KOG0585 Ca2+/calmodulin-depend 100.0 5.2E-45 1.1E-49 395.0 20.1 267 665-960 93-377 (576)
20 KOG0612 Rho-associated, coiled 100.0 1E-45 2.2E-50 435.0 15.6 292 665-988 71-369 (1317)
21 cd05612 STKc_PRKX_like Catalyt 100.0 2.6E-44 5.6E-49 399.7 26.0 283 669-985 1-284 (291)
22 KOG0600 Cdc2-related protein k 100.0 1.1E-44 2.3E-49 396.4 22.2 291 666-995 114-434 (560)
23 PTZ00263 protein kinase A cata 100.0 3.8E-44 8.3E-49 405.4 27.4 269 666-968 15-284 (329)
24 KOG0580 Serine/threonine prote 100.0 2.4E-45 5.2E-50 367.2 14.6 260 666-960 19-278 (281)
25 PTZ00426 cAMP-dependent protei 100.0 5.5E-44 1.2E-48 405.5 26.9 288 665-986 26-315 (340)
26 KOG0659 Cdk activating kinase 100.0 3.5E-44 7.7E-49 363.6 22.3 260 669-962 2-288 (318)
27 cd05571 STKc_PKB Catalytic dom 100.0 8.6E-44 1.9E-48 401.6 26.8 263 675-968 1-264 (323)
28 KOG0582 Ste20-like serine/thre 100.0 8.8E-44 1.9E-48 383.6 24.8 273 662-964 19-302 (516)
29 KOG0578 p21-activated serine/t 100.0 1.8E-44 3.9E-49 401.7 19.2 266 656-960 262-528 (550)
30 cd05628 STKc_NDR1 Catalytic do 100.0 3.7E-43 8.1E-48 402.9 29.2 295 669-970 1-308 (363)
31 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-43 3.5E-48 408.1 26.0 317 669-991 1-339 (377)
32 cd05599 STKc_NDR_like Catalyti 100.0 3E-43 6.4E-48 404.0 27.5 308 669-982 1-321 (364)
33 KOG0599 Phosphorylase kinase g 100.0 9.9E-45 2.2E-49 366.9 13.1 270 668-971 16-299 (411)
34 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.9E-43 8.6E-48 398.0 27.7 279 669-985 1-285 (333)
35 KOG0198 MEKK and related serin 100.0 7.7E-44 1.7E-48 387.3 20.6 261 669-961 17-282 (313)
36 cd05631 STKc_GRK4 Catalytic do 100.0 4.2E-43 9.1E-48 388.7 26.5 278 670-977 1-283 (285)
37 cd05593 STKc_PKB_gamma Catalyt 100.0 9.1E-43 2E-47 394.0 27.6 264 675-969 1-265 (328)
38 cd05596 STKc_ROCK Catalytic do 100.0 9.2E-43 2E-47 400.3 27.1 287 665-984 39-333 (370)
39 cd05626 STKc_LATS2 Catalytic d 100.0 2.4E-42 5.2E-47 398.8 29.7 305 670-981 2-330 (381)
40 KOG0663 Protein kinase PITSLRE 100.0 3.2E-43 6.9E-48 366.4 20.0 262 668-963 75-369 (419)
41 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-42 4.1E-47 390.6 28.1 263 675-968 1-264 (323)
42 cd05585 STKc_YPK1_like Catalyt 100.0 1.7E-42 3.7E-47 389.0 27.4 261 677-969 1-261 (312)
43 KOG0611 Predicted serine/threo 100.0 1.3E-43 2.7E-48 375.1 16.8 255 668-959 52-307 (668)
44 KOG0986 G protein-coupled rece 100.0 6.8E-44 1.5E-48 383.6 14.9 294 664-987 180-478 (591)
45 cd05598 STKc_LATS Catalytic do 100.0 1.8E-42 4E-47 399.2 26.7 292 669-967 1-313 (376)
46 cd05627 STKc_NDR2 Catalytic do 100.0 2E-42 4.3E-47 396.5 26.6 300 669-972 1-310 (360)
47 cd05590 STKc_nPKC_eta Catalyti 100.0 3E-42 6.5E-47 388.4 27.3 273 675-978 1-276 (320)
48 KOG0032 Ca2+/calmodulin-depend 100.0 2.7E-42 5.9E-47 390.0 26.5 259 668-961 34-299 (382)
49 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.3E-42 2.8E-47 396.4 24.0 307 669-983 1-311 (350)
50 cd05587 STKc_cPKC Catalytic do 100.0 4.5E-42 9.8E-47 387.7 28.1 270 670-970 1-272 (324)
51 cd05621 STKc_ROCK2 Catalytic d 100.0 2.6E-42 5.7E-47 396.2 26.3 285 666-983 40-332 (370)
52 cd05625 STKc_LATS1 Catalytic d 100.0 4.1E-42 8.9E-47 397.2 28.1 293 670-966 2-316 (382)
53 cd05589 STKc_PKN Catalytic dom 100.0 4.5E-42 9.8E-47 387.7 27.5 266 671-968 1-270 (324)
54 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-42 3.2E-47 392.7 23.6 279 669-981 1-287 (330)
55 cd05591 STKc_nPKC_epsilon Cata 100.0 4.8E-42 1E-46 387.0 27.4 273 675-978 1-277 (321)
56 cd05575 STKc_SGK Catalytic dom 100.0 4.2E-42 9.2E-47 387.8 26.9 264 675-969 1-265 (323)
57 KOG0660 Mitogen-activated prot 100.0 9.7E-43 2.1E-47 369.5 20.2 260 669-961 22-316 (359)
58 cd05594 STKc_PKB_alpha Catalyt 100.0 3.1E-42 6.8E-47 389.2 25.2 263 675-968 1-265 (325)
59 cd05616 STKc_cPKC_beta Catalyt 100.0 6.9E-42 1.5E-46 386.1 27.4 278 670-978 1-280 (323)
60 cd05619 STKc_nPKC_theta Cataly 100.0 8.8E-42 1.9E-46 383.9 27.8 269 675-978 1-271 (316)
61 cd05574 STKc_phototropin_like 100.0 2.2E-41 4.8E-46 380.6 30.8 312 669-980 1-314 (316)
62 cd05570 STKc_PKC Catalytic dom 100.0 9.7E-42 2.1E-46 384.0 27.4 273 675-978 1-275 (318)
63 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-41 2.4E-46 383.1 27.4 270 675-978 1-271 (316)
64 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-41 2.5E-46 385.3 27.3 266 675-971 1-278 (329)
65 cd05615 STKc_cPKC_alpha Cataly 100.0 1.7E-41 3.6E-46 382.9 28.4 270 670-970 1-272 (323)
66 KOG0614 cGMP-dependent protein 100.0 1.2E-43 2.7E-48 385.1 10.2 296 664-991 415-713 (732)
67 cd05604 STKc_SGK3 Catalytic do 100.0 8.8E-42 1.9E-46 385.6 25.7 273 675-978 1-274 (325)
68 cd05622 STKc_ROCK1 Catalytic d 100.0 1.5E-41 3.2E-46 390.3 27.9 280 665-980 39-329 (371)
69 cd05620 STKc_nPKC_delta Cataly 100.0 1.6E-41 3.5E-46 381.8 27.5 262 675-970 1-263 (316)
70 KOG0608 Warts/lats-like serine 100.0 1.6E-42 3.5E-47 383.7 18.3 309 666-980 626-951 (1034)
71 cd05607 STKc_GRK7 Catalytic do 100.0 2.9E-41 6.2E-46 372.4 27.5 272 677-977 1-276 (277)
72 cd05618 STKc_aPKC_iota Catalyt 100.0 2.5E-41 5.5E-46 382.4 27.6 265 675-970 1-277 (329)
73 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.5E-41 5.4E-46 382.1 27.3 277 675-982 1-287 (327)
74 KOG4717 Serine/threonine prote 100.0 4E-42 8.6E-47 372.9 19.6 262 668-965 17-280 (864)
75 cd05584 STKc_p70S6K Catalytic 100.0 3.1E-41 6.7E-46 380.7 27.7 264 674-968 1-269 (323)
76 cd05602 STKc_SGK1 Catalytic do 100.0 2.9E-41 6.3E-46 381.3 27.0 263 675-968 1-264 (325)
77 cd05608 STKc_GRK1 Catalytic do 100.0 3.7E-41 8E-46 372.2 27.1 272 677-977 1-279 (280)
78 cd05586 STKc_Sck1_like Catalyt 100.0 1.4E-41 3E-46 384.9 23.6 273 677-979 1-277 (330)
79 cd05603 STKc_SGK2 Catalytic do 100.0 3.7E-41 8E-46 379.8 26.9 263 675-968 1-264 (321)
80 KOG0201 Serine/threonine prote 100.0 2.8E-43 6E-48 380.2 8.9 258 669-962 13-270 (467)
81 KOG0594 Protein kinase PCTAIRE 100.0 2.4E-41 5.1E-46 360.9 23.5 262 668-962 10-309 (323)
82 cd05597 STKc_DMPK_like Catalyt 100.0 5.7E-41 1.2E-45 379.9 28.2 280 669-981 1-290 (331)
83 cd05605 STKc_GRK4_like Catalyt 100.0 4.3E-41 9.4E-46 372.6 26.4 278 670-977 1-283 (285)
84 KOG0192 Tyrosine kinase specif 100.0 5.8E-41 1.3E-45 376.0 26.3 258 664-950 36-298 (362)
85 cd05624 STKc_MRCK_beta Catalyt 100.0 6E-41 1.3E-45 379.7 25.7 277 669-974 1-285 (331)
86 cd05623 STKc_MRCK_alpha Cataly 100.0 8.9E-41 1.9E-45 378.5 26.5 275 669-974 1-285 (332)
87 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-40 2.4E-45 377.7 27.2 281 670-980 1-292 (332)
88 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.3E-40 2.8E-45 369.4 26.1 256 668-958 4-288 (288)
89 cd05582 STKc_RSK_N N-terminal 100.0 5.7E-41 1.2E-45 377.8 23.6 265 674-970 1-269 (318)
90 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-40 2.5E-45 369.2 25.7 257 669-958 1-287 (287)
91 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-40 3.4E-45 371.5 26.3 261 668-963 4-296 (303)
92 KOG0667 Dual-specificity tyros 100.0 4.9E-41 1.1E-45 381.6 21.7 253 670-961 187-508 (586)
93 KOG0696 Serine/threonine prote 100.0 1.3E-41 2.9E-46 360.5 14.6 286 665-981 345-632 (683)
94 KOG0589 Serine/threonine prote 100.0 2.8E-41 6.1E-46 375.5 17.9 260 668-960 3-263 (426)
95 cd06649 PKc_MEK2 Catalytic dom 100.0 6.7E-40 1.4E-44 371.2 29.4 262 666-964 2-310 (331)
96 KOG0197 Tyrosine kinases [Sign 100.0 1E-40 2.2E-45 371.8 20.5 255 661-947 198-453 (468)
97 KOG0579 Ste20-like serine/thre 100.0 1.2E-41 2.6E-46 375.9 13.0 261 669-964 32-298 (1187)
98 cd05580 STKc_PKA Catalytic dom 100.0 1.4E-39 3.1E-44 361.3 29.5 278 669-980 1-279 (290)
99 cd05630 STKc_GRK6 Catalytic do 100.0 1E-39 2.2E-44 361.7 26.9 274 670-972 1-278 (285)
100 cd05632 STKc_GRK5 Catalytic do 100.0 1.6E-39 3.5E-44 360.1 28.2 280 670-977 1-283 (285)
101 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.1E-40 1.8E-44 371.3 25.8 263 670-964 1-299 (338)
102 KOG0695 Serine/threonine prote 100.0 1.1E-40 2.4E-45 345.2 15.5 277 663-970 244-531 (593)
103 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-39 4E-44 360.2 26.5 256 669-958 1-290 (290)
104 PHA03212 serine/threonine kina 100.0 1.4E-39 3E-44 375.8 26.5 254 666-961 89-382 (391)
105 cd05609 STKc_MAST Catalytic do 100.0 7.3E-39 1.6E-43 358.4 30.9 302 669-987 1-303 (305)
106 cd06650 PKc_MEK1 Catalytic dom 100.0 3.8E-39 8.2E-44 365.2 28.1 259 666-961 2-305 (333)
107 PLN00034 mitogen-activated pro 100.0 3E-39 6.5E-44 369.2 27.3 256 666-961 71-334 (353)
108 cd07853 STKc_NLK Catalytic dom 100.0 3.7E-39 8.1E-44 371.1 27.4 261 670-964 1-297 (372)
109 KOG0658 Glycogen synthase kina 100.0 2.4E-40 5.3E-45 351.9 16.0 252 670-961 25-312 (364)
110 KOG0574 STE20-like serine/thre 100.0 8.7E-42 1.9E-46 349.1 4.5 257 670-963 34-291 (502)
111 KOG0596 Dual specificity; seri 100.0 5.8E-40 1.3E-44 361.4 18.9 260 666-960 358-632 (677)
112 PTZ00036 glycogen synthase kin 100.0 4.6E-39 1E-43 377.3 27.9 256 668-963 65-359 (440)
113 KOG0577 Serine/threonine prote 100.0 1.9E-40 4.1E-45 365.2 14.5 254 670-960 27-283 (948)
114 cd07876 STKc_JNK2 Catalytic do 100.0 9.9E-39 2.2E-43 365.8 27.6 255 668-960 20-320 (359)
115 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.8E-39 1.9E-43 358.4 26.3 260 668-962 5-293 (309)
116 KOG0607 MAP kinase-interacting 100.0 6.9E-40 1.5E-44 338.5 15.2 265 671-964 79-370 (463)
117 cd07875 STKc_JNK1 Catalytic do 100.0 1.5E-38 3.3E-43 365.0 27.8 255 668-960 23-323 (364)
118 cd07863 STKc_CDK4 Catalytic do 100.0 1E-38 2.2E-43 353.8 25.1 255 670-958 1-288 (288)
119 cd07874 STKc_JNK3 Catalytic do 100.0 1.5E-38 3.1E-43 363.9 26.9 256 668-961 16-317 (355)
120 PTZ00283 serine/threonine prot 100.0 1E-38 2.2E-43 379.0 26.3 265 667-962 30-304 (496)
121 KOG0604 MAP kinase-activated p 100.0 1.2E-39 2.5E-44 334.8 15.3 253 668-960 60-327 (400)
122 PTZ00267 NIMA-related protein 100.0 1.7E-38 3.8E-43 376.6 27.4 260 669-961 67-329 (478)
123 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.2E-39 1.8E-43 364.1 23.5 255 668-961 14-304 (343)
124 cd06625 STKc_MEKK3_like Cataly 100.0 5.1E-38 1.1E-42 343.0 28.6 260 669-958 2-263 (263)
125 cd05577 STKc_GRK Catalytic dom 100.0 3.3E-38 7.1E-43 347.9 26.6 263 677-967 1-266 (277)
126 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.9E-38 4.2E-43 360.3 25.1 259 664-953 2-328 (338)
127 cd06644 STKc_STK10_LOK Catalyt 100.0 6.9E-38 1.5E-42 348.1 28.6 264 668-966 11-280 (292)
128 PTZ00284 protein kinase; Provi 100.0 3.8E-38 8.3E-43 373.4 27.8 254 667-961 127-444 (467)
129 cd08227 PK_STRAD_alpha Pseudok 100.0 4.9E-38 1.1E-42 355.3 26.9 265 673-962 2-314 (327)
130 cd05572 STKc_cGK_PKG Catalytic 100.0 6.9E-38 1.5E-42 342.0 26.8 258 677-964 1-261 (262)
131 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.5E-38 1.4E-42 350.0 26.8 261 667-962 4-293 (301)
132 cd08223 STKc_Nek4 Catalytic do 100.0 1.6E-37 3.6E-42 337.8 28.6 256 670-958 1-257 (257)
133 cd08529 STKc_FA2-like Catalyti 100.0 1.5E-37 3.3E-42 337.7 28.1 256 670-958 1-256 (256)
134 PTZ00266 NIMA-related protein 100.0 6.8E-38 1.5E-42 382.0 27.3 264 666-963 10-303 (1021)
135 PHA03207 serine/threonine kina 100.0 7E-38 1.5E-42 362.8 26.1 261 667-967 90-387 (392)
136 cd06637 STKc_TNIK Catalytic do 100.0 1.2E-37 2.6E-42 342.0 26.6 255 669-958 6-272 (272)
137 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-37 2.7E-42 343.6 26.3 260 669-963 5-270 (280)
138 cd05633 STKc_GRK3 Catalytic do 100.0 2.2E-37 4.8E-42 341.9 28.0 259 676-966 1-266 (279)
139 cd06619 PKc_MKK5 Catalytic dom 100.0 2.2E-37 4.7E-42 341.8 27.8 252 669-961 1-259 (279)
140 PF00069 Pkinase: Protein kina 100.0 2.9E-38 6.3E-43 343.9 20.4 254 671-958 1-260 (260)
141 cd06609 STKc_MST3_like Catalyt 100.0 2E-37 4.4E-42 340.8 27.2 258 669-962 1-258 (274)
142 cd05611 STKc_Rim15_like Cataly 100.0 1.6E-37 3.5E-42 338.7 26.0 256 675-964 2-260 (260)
143 cd06643 STKc_SLK Catalytic dom 100.0 2.9E-37 6.3E-42 341.2 28.1 257 670-961 6-268 (282)
144 KOG0983 Mitogen-activated prot 100.0 1.9E-38 4.1E-43 321.8 16.8 258 667-960 90-354 (391)
145 cd06615 PKc_MEK Catalytic doma 100.0 2.5E-37 5.4E-42 346.5 27.8 255 669-960 1-292 (308)
146 cd07861 STKc_CDK1_euk Catalyti 100.0 1.8E-37 3.9E-42 343.0 26.4 256 670-958 1-285 (285)
147 PHA03211 serine/threonine kina 100.0 1.5E-37 3.3E-42 363.5 26.7 254 667-960 167-460 (461)
148 cd05579 STKc_MAST_like Catalyt 100.0 1.7E-37 3.6E-42 338.5 25.0 265 677-963 1-265 (265)
149 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-37 8.5E-42 341.4 28.1 271 665-963 2-288 (288)
150 cd06645 STKc_MAP4K3 Catalytic 100.0 2.2E-37 4.7E-42 339.1 25.6 254 668-957 8-267 (267)
151 KOG0662 Cyclin-dependent kinas 100.0 3.5E-38 7.6E-43 301.3 16.6 259 669-961 2-289 (292)
152 PHA02988 hypothetical protein; 100.0 2.5E-37 5.3E-42 342.2 26.1 244 675-952 26-276 (283)
153 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.2E-37 1.3E-41 335.4 28.4 261 670-958 1-267 (267)
154 PHA03209 serine/threonine kina 100.0 1.1E-37 2.4E-42 356.7 23.2 252 667-961 64-357 (357)
155 cd08221 STKc_Nek9 Catalytic do 100.0 6.8E-37 1.5E-41 332.8 28.3 256 670-958 1-256 (256)
156 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.2E-37 7E-42 340.7 26.1 256 668-958 15-282 (282)
157 cd05606 STKc_beta_ARK Catalyti 100.0 5.4E-37 1.2E-41 338.6 27.6 260 676-972 1-272 (278)
158 cd06654 STKc_PAK1 Catalytic do 100.0 5.6E-37 1.2E-41 341.7 27.8 256 669-961 20-276 (296)
159 cd06656 STKc_PAK3 Catalytic do 100.0 3.7E-37 8E-42 343.3 26.1 256 669-961 19-275 (297)
160 cd07868 STKc_CDK8 Catalytic do 100.0 3.4E-37 7.4E-42 346.7 26.0 251 674-958 6-317 (317)
161 cd06655 STKc_PAK2 Catalytic do 100.0 7.5E-37 1.6E-41 340.7 28.0 257 669-962 19-276 (296)
162 cd08218 STKc_Nek1 Catalytic do 100.0 6E-37 1.3E-41 333.3 26.7 256 670-958 1-256 (256)
163 cd06646 STKc_MAP4K5 Catalytic 100.0 4.2E-37 9.2E-42 336.8 25.4 254 668-957 8-267 (267)
164 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.8E-37 1.3E-41 335.1 26.5 261 669-958 1-267 (267)
165 cd05610 STKc_MASTL Catalytic d 100.0 9.1E-37 2E-41 374.3 31.2 151 668-820 3-153 (669)
166 cd06631 STKc_YSK4 Catalytic do 100.0 9.8E-37 2.1E-41 333.5 27.6 261 670-958 1-265 (265)
167 KOG4721 Serine/threonine prote 100.0 8.7E-39 1.9E-43 350.8 11.3 252 663-960 118-369 (904)
168 cd06651 STKc_MEKK3 Catalytic d 100.0 1.3E-36 2.8E-41 333.1 27.7 259 670-959 3-265 (266)
169 cd07847 STKc_CDKL1_4 Catalytic 100.0 9.2E-37 2E-41 337.4 26.8 256 669-958 1-286 (286)
170 cd07839 STKc_CDK5 Catalytic do 100.0 3E-37 6.4E-42 341.3 22.3 255 670-958 1-284 (284)
171 KOG0586 Serine/threonine prote 100.0 7.9E-38 1.7E-42 351.6 17.8 261 664-961 51-312 (596)
172 cd05578 STKc_Yank1 Catalytic d 100.0 3.5E-37 7.5E-42 335.7 22.2 255 670-958 1-258 (258)
173 cd07832 STKc_CCRK Catalytic do 100.0 1.5E-36 3.3E-41 335.6 27.5 257 670-959 1-286 (286)
174 KOG4236 Serine/threonine prote 100.0 1.9E-38 4E-43 345.2 11.8 257 675-967 570-832 (888)
175 cd08220 STKc_Nek8 Catalytic do 100.0 1.8E-36 4E-41 329.2 27.3 255 670-958 1-256 (256)
176 KOG1989 ARK protein kinase fam 100.0 1.2E-37 2.7E-42 364.8 19.2 271 666-961 34-321 (738)
177 cd06652 STKc_MEKK2 Catalytic d 100.0 2.1E-36 4.6E-41 331.0 27.9 260 669-959 2-265 (265)
178 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.4E-36 2.9E-41 333.0 26.4 255 666-954 2-260 (266)
179 cd05106 PTKc_CSF-1R Catalytic 100.0 5.3E-37 1.1E-41 353.0 24.0 255 666-947 35-364 (374)
180 cd05104 PTKc_Kit Catalytic dom 100.0 7.1E-37 1.5E-41 352.2 25.0 258 666-954 32-369 (375)
181 cd06613 STKc_MAP4K3_like Catal 100.0 1.8E-36 4E-41 330.3 26.8 254 669-957 3-262 (262)
182 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-36 3.3E-41 335.4 26.4 258 666-955 2-279 (283)
183 KOG0671 LAMMER dual specificit 100.0 2.3E-38 5E-43 336.7 11.2 256 667-961 87-412 (415)
184 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-36 2.4E-41 336.7 25.2 256 670-958 1-284 (284)
185 cd08219 STKc_Nek3 Catalytic do 100.0 1.9E-36 4.1E-41 329.3 26.6 252 670-955 1-252 (255)
186 cd06612 STKc_MST1_2 Catalytic 100.0 1.8E-36 4E-41 329.1 26.5 253 669-958 3-256 (256)
187 KOG0193 Serine/threonine prote 100.0 6E-38 1.3E-42 349.9 14.9 263 662-956 385-654 (678)
188 cd07850 STKc_JNK Catalytic dom 100.0 1.5E-36 3.3E-41 346.9 26.7 255 668-960 15-316 (353)
189 cd06605 PKc_MAPKK Catalytic do 100.0 1E-36 2.2E-41 333.2 23.9 256 669-960 1-262 (265)
190 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-36 3.4E-41 332.2 25.2 261 670-959 1-268 (268)
191 cd05096 PTKc_DDR1 Catalytic do 100.0 2.3E-36 4.9E-41 338.0 27.0 255 667-952 3-298 (304)
192 cd06658 STKc_PAK5 Catalytic do 100.0 1E-36 2.2E-41 338.9 24.0 255 669-960 22-277 (292)
193 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.8E-36 4E-41 335.3 25.8 258 666-960 2-271 (284)
194 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-36 5E-41 338.7 26.6 263 667-963 5-298 (309)
195 cd06608 STKc_myosinIII_like Ca 100.0 2.1E-36 4.6E-41 331.9 25.6 256 668-958 5-275 (275)
196 KOG4279 Serine/threonine prote 100.0 6.9E-38 1.5E-42 349.7 13.8 250 676-960 582-837 (1226)
197 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.1E-36 4.7E-41 334.9 25.4 257 669-961 1-268 (286)
198 KOG2345 Serine/threonine prote 100.0 7.2E-38 1.6E-42 314.8 11.9 265 666-955 18-296 (302)
199 cd05052 PTKc_Abl Catalytic dom 100.0 4.1E-36 8.8E-41 328.5 26.8 251 666-947 3-254 (263)
200 cd06648 STKc_PAK_II Catalytic 100.0 5.6E-36 1.2E-40 331.7 27.9 255 670-961 20-275 (285)
201 KOG0584 Serine/threonine prote 100.0 1.5E-37 3.2E-42 349.5 15.2 253 672-961 43-302 (632)
202 cd06639 STKc_myosinIIIB Cataly 100.0 6.2E-36 1.3E-40 332.2 27.8 257 668-959 21-291 (291)
203 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.7E-36 3.7E-41 335.4 23.2 256 669-958 1-286 (286)
204 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.6E-36 7.9E-41 332.2 25.7 261 669-964 1-270 (283)
205 cd06640 STKc_MST4 Catalytic do 100.0 5.4E-36 1.2E-40 330.2 26.9 258 669-963 4-261 (277)
206 cd05072 PTKc_Lyn Catalytic dom 100.0 4.3E-36 9.4E-41 327.7 25.8 253 665-953 2-255 (261)
207 cd06638 STKc_myosinIIIA Cataly 100.0 4.2E-36 9.1E-41 332.4 25.9 257 667-958 16-286 (286)
208 cd07844 STKc_PCTAIRE_like Cata 100.0 4.2E-36 9E-41 333.4 25.9 256 668-958 4-291 (291)
209 cd06632 STKc_MEKK1_plant Catal 100.0 8.3E-36 1.8E-40 324.2 27.7 255 670-958 1-258 (258)
210 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.1E-36 1.3E-40 328.6 26.7 258 670-958 2-272 (272)
211 cd06607 STKc_TAO Catalytic dom 100.0 7.1E-36 1.5E-40 334.6 27.7 256 669-961 15-273 (307)
212 PRK13184 pknD serine/threonine 100.0 5.6E-36 1.2E-40 364.2 28.8 271 669-948 2-282 (932)
213 PLN00009 cyclin-dependent kina 100.0 5E-36 1.1E-40 333.4 26.2 261 669-962 2-291 (294)
214 cd05054 PTKc_VEGFR Catalytic d 100.0 2.9E-36 6.3E-41 342.1 24.7 261 664-955 2-329 (337)
215 cd07841 STKc_CDK7 Catalytic do 100.0 4.3E-36 9.3E-41 334.5 25.4 259 670-961 1-288 (298)
216 cd06623 PKc_MAPKK_plant_like C 100.0 6.5E-36 1.4E-40 326.2 26.3 258 669-962 1-263 (264)
217 cd08228 STKc_Nek6 Catalytic do 100.0 6.8E-36 1.5E-40 327.1 26.3 255 669-954 2-260 (267)
218 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.4E-36 1.2E-40 346.4 26.8 259 663-948 31-390 (400)
219 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.6E-36 3.4E-41 334.4 21.3 258 669-963 4-261 (277)
220 PHA03210 serine/threonine kina 100.0 1E-36 2.3E-41 362.8 21.3 268 668-966 147-465 (501)
221 cd06917 STKc_NAK1_like Catalyt 100.0 5.4E-36 1.2E-40 329.9 25.4 257 670-962 2-262 (277)
222 cd08225 STKc_Nek5 Catalytic do 100.0 6.1E-36 1.3E-40 325.3 25.4 256 670-958 1-257 (257)
223 cd05049 PTKc_Trk Catalytic dom 100.0 6.9E-36 1.5E-40 329.5 26.0 256 667-954 3-276 (280)
224 cd06626 STKc_MEKK4 Catalytic d 100.0 1.4E-35 3.1E-40 323.7 28.2 259 670-958 1-264 (264)
225 cd06659 STKc_PAK6 Catalytic do 100.0 4.7E-36 1E-40 334.4 24.7 257 669-962 21-278 (297)
226 cd05581 STKc_PDK1 Catalytic do 100.0 4.7E-36 1E-40 330.3 24.4 279 669-958 1-280 (280)
227 cd07837 STKc_CdkB_plant Cataly 100.0 7.5E-36 1.6E-40 332.0 26.2 258 669-959 1-295 (295)
228 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.5E-35 3.3E-40 328.5 28.3 259 669-962 1-273 (287)
229 cd05613 STKc_MSK1_N N-terminal 100.0 1.2E-35 2.6E-40 329.6 27.5 268 670-967 1-280 (290)
230 cd07867 STKc_CDC2L6 Catalytic 100.0 7.9E-36 1.7E-40 335.4 26.2 250 675-958 7-317 (317)
231 cd06633 STKc_TAO3 Catalytic do 100.0 2.8E-35 6E-40 330.8 30.3 258 670-964 22-282 (313)
232 cd08217 STKc_Nek2 Catalytic do 100.0 1.6E-35 3.4E-40 322.9 27.5 256 670-958 1-265 (265)
233 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.3E-35 2.7E-40 329.7 27.2 255 669-958 5-291 (291)
234 cd06647 STKc_PAK_I Catalytic d 100.0 4.1E-36 8.9E-41 334.2 23.1 256 669-961 19-275 (293)
235 cd07880 STKc_p38gamma_MAPK12 C 100.0 8.1E-36 1.8E-40 339.5 25.9 255 668-961 14-304 (343)
236 cd07843 STKc_CDC2L1 Catalytic 100.0 9.4E-36 2E-40 331.0 25.7 257 668-958 4-293 (293)
237 cd05062 PTKc_IGF-1R Catalytic 100.0 1.2E-35 2.5E-40 327.5 26.2 258 666-955 3-274 (277)
238 cd05108 PTKc_EGFR Catalytic do 100.0 9.5E-36 2.1E-40 335.0 25.8 253 666-948 4-261 (316)
239 cd05583 STKc_MSK_N N-terminal 100.0 1.2E-35 2.7E-40 329.3 26.3 273 670-973 1-284 (288)
240 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-35 2.4E-40 325.5 25.5 251 669-946 2-256 (267)
241 cd05148 PTKc_Srm_Brk Catalytic 100.0 8.3E-36 1.8E-40 325.3 24.4 249 668-948 5-254 (261)
242 PHA03390 pk1 serine/threonine- 100.0 1.2E-35 2.5E-40 326.0 25.6 248 669-960 14-267 (267)
243 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-35 3.2E-40 322.6 26.2 250 668-954 3-253 (256)
244 cd07833 STKc_CDKL Catalytic do 100.0 1E-35 2.2E-40 329.5 25.3 257 669-958 1-288 (288)
245 cd07834 STKc_MAPK Catalytic do 100.0 6.4E-36 1.4E-40 338.4 24.2 289 670-997 1-326 (330)
246 cd07835 STKc_CDK1_like Catalyt 100.0 1.1E-35 2.3E-40 328.6 25.5 255 671-958 1-283 (283)
247 KOG0194 Protein tyrosine kinas 100.0 2E-36 4.2E-41 343.2 19.9 261 661-950 149-415 (474)
248 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-35 2.7E-40 328.1 25.8 255 670-958 1-284 (284)
249 cd05090 PTKc_Ror1 Catalytic do 100.0 1.6E-35 3.5E-40 327.5 26.4 258 666-955 2-279 (283)
250 cd08215 STKc_Nek Catalytic dom 100.0 2.3E-35 4.9E-40 320.1 27.1 256 670-958 1-258 (258)
251 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.4E-36 1.8E-40 338.6 24.6 258 669-961 5-297 (337)
252 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-35 4.7E-40 327.4 27.4 252 666-946 2-270 (288)
253 cd06641 STKc_MST3 Catalytic do 100.0 1.7E-35 3.6E-40 326.3 26.3 254 670-960 5-258 (277)
254 cd06616 PKc_MKK4 Catalytic dom 100.0 6.8E-36 1.5E-40 331.2 23.3 262 668-964 3-276 (288)
255 cd06614 STKc_PAK Catalytic dom 100.0 1.6E-35 3.5E-40 327.9 26.3 261 668-964 18-279 (286)
256 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-35 3.3E-40 326.2 25.8 258 665-954 2-273 (277)
257 cd05055 PTKc_PDGFR Catalytic d 100.0 1.9E-35 4.1E-40 330.4 26.9 258 665-953 31-295 (302)
258 cd08226 PK_STRAD_beta Pseudoki 100.0 8.3E-36 1.8E-40 337.3 24.2 262 675-961 4-314 (328)
259 cd07865 STKc_CDK9 Catalytic do 100.0 1.6E-35 3.5E-40 331.5 26.2 261 668-958 11-310 (310)
260 cd07831 STKc_MOK Catalytic dom 100.0 2.1E-35 4.5E-40 325.8 26.7 251 671-958 1-282 (282)
261 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-35 2.7E-40 333.5 25.2 260 670-958 1-316 (316)
262 cd05068 PTKc_Frk_like Catalyti 100.0 2.5E-35 5.4E-40 321.8 26.8 248 666-945 3-251 (261)
263 cd06635 STKc_TAO1 Catalytic do 100.0 4E-35 8.7E-40 330.0 28.8 255 669-960 25-282 (317)
264 cd07849 STKc_ERK1_2_like Catal 100.0 1.1E-35 2.4E-40 337.5 24.3 260 668-961 4-298 (336)
265 cd05071 PTKc_Src Catalytic dom 100.0 2.7E-35 5.8E-40 322.0 26.4 248 666-946 3-251 (262)
266 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.6E-35 1E-39 320.3 28.3 259 669-958 2-264 (264)
267 cd06624 STKc_ASK Catalytic dom 100.0 3.9E-35 8.5E-40 321.6 27.6 252 670-958 9-268 (268)
268 KOG0666 Cyclin C-dependent kin 100.0 6.7E-37 1.5E-41 315.6 12.6 263 668-960 23-342 (438)
269 cd05088 PTKc_Tie2 Catalytic do 100.0 1.7E-35 3.7E-40 330.9 24.8 255 666-955 4-276 (303)
270 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.2E-35 9.1E-40 320.6 27.4 251 669-946 2-256 (267)
271 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.2E-35 7E-40 320.7 26.4 252 665-953 2-254 (260)
272 cd05123 STKc_AGC Catalytic dom 100.0 2.8E-35 6E-40 318.7 25.6 250 677-958 1-250 (250)
273 cd07855 STKc_ERK5 Catalytic do 100.0 9.6E-36 2.1E-40 337.6 22.6 265 669-964 5-303 (334)
274 cd05091 PTKc_Ror2 Catalytic do 100.0 2.4E-35 5.2E-40 326.0 25.2 257 666-954 2-278 (283)
275 cd05084 PTKc_Fes Catalytic dom 100.0 5.1E-35 1.1E-39 317.5 27.2 246 675-953 1-247 (252)
276 cd05033 PTKc_EphR Catalytic do 100.0 4.5E-35 9.8E-40 320.7 26.9 254 668-954 3-260 (266)
277 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.9E-35 6.4E-40 321.0 25.3 253 665-954 2-255 (260)
278 cd05053 PTKc_FGFR Catalytic do 100.0 2.4E-35 5.3E-40 327.6 25.0 262 662-955 5-287 (293)
279 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.9E-35 8.5E-40 323.4 26.2 257 667-955 4-274 (277)
280 cd05082 PTKc_Csk Catalytic dom 100.0 3.8E-35 8.1E-40 319.4 25.3 247 665-953 2-250 (256)
281 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.4E-35 7.3E-40 320.1 24.9 251 668-955 3-254 (256)
282 cd05051 PTKc_DDR Catalytic dom 100.0 4.7E-35 1E-39 325.7 26.3 257 667-954 3-292 (296)
283 cd05059 PTKc_Tec_like Catalyti 100.0 4.5E-35 9.7E-40 318.9 25.6 250 668-954 3-253 (256)
284 cd06657 STKc_PAK4 Catalytic do 100.0 4.6E-35 1E-39 325.6 26.2 254 671-961 22-276 (292)
285 cd06634 STKc_TAO2 Catalytic do 100.0 5.6E-35 1.2E-39 327.5 26.9 256 669-961 15-273 (308)
286 cd08216 PK_STRAD Pseudokinase 100.0 3.6E-35 7.8E-40 329.7 25.2 256 681-961 12-301 (314)
287 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.3E-35 1.2E-39 337.9 27.2 260 664-954 32-394 (401)
288 cd06606 STKc_MAPKKK Catalytic 100.0 9.4E-35 2E-39 315.2 27.3 257 670-958 1-260 (260)
289 cd05092 PTKc_TrkA Catalytic do 100.0 6.7E-35 1.5E-39 322.1 26.3 254 667-953 3-275 (280)
290 cd00192 PTKc Catalytic domain 100.0 9.6E-35 2.1E-39 316.0 26.7 249 675-955 1-260 (262)
291 cd05035 PTKc_Axl_like Catalyti 100.0 8.3E-35 1.8E-39 319.3 26.3 253 671-954 1-267 (273)
292 cd07838 STKc_CDK4_6_like Catal 100.0 7.9E-35 1.7E-39 322.0 26.3 254 671-958 1-287 (287)
293 cd06627 STKc_Cdc7_like Catalyt 100.0 1.6E-34 3.5E-39 313.1 28.2 254 670-958 1-254 (254)
294 cd07854 STKc_MAPK4_6 Catalytic 100.0 6E-35 1.3E-39 332.2 26.0 258 669-961 5-306 (342)
295 cd05034 PTKc_Src_like Catalyti 100.0 9.7E-35 2.1E-39 316.9 26.5 253 665-953 2-255 (261)
296 cd05069 PTKc_Yes Catalytic dom 100.0 9.4E-35 2E-39 317.2 26.2 251 666-953 3-254 (260)
297 cd05122 PKc_STE Catalytic doma 100.0 1.5E-34 3.3E-39 312.2 27.6 252 670-957 1-253 (253)
298 cd05066 PTKc_EphR_A Catalytic 100.0 8.8E-35 1.9E-39 318.7 26.0 252 668-947 3-258 (267)
299 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.9E-35 1.1E-39 333.4 24.9 254 668-960 16-305 (345)
300 cd05116 PTKc_Syk Catalytic dom 100.0 1.3E-34 2.8E-39 315.5 27.1 247 676-951 2-251 (257)
301 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.2E-34 2.6E-39 327.7 27.8 254 668-960 9-293 (328)
302 cd07851 STKc_p38 Catalytic dom 100.0 3.4E-35 7.5E-40 334.3 23.5 255 668-961 14-304 (343)
303 KOG1026 Nerve growth factor re 100.0 7.7E-36 1.7E-40 347.7 18.3 255 666-948 483-755 (774)
304 cd05103 PTKc_VEGFR2 Catalytic 100.0 6E-35 1.3E-39 332.3 25.3 259 666-955 4-335 (343)
305 cd05094 PTKc_TrkC Catalytic do 100.0 8.9E-35 1.9E-39 323.0 26.0 255 667-950 3-277 (291)
306 cd07879 STKc_p38delta_MAPK13 C 100.0 4.4E-35 9.5E-40 333.4 24.0 257 669-965 15-307 (342)
307 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.9E-35 1.9E-39 325.7 26.0 257 665-949 14-293 (307)
308 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-34 2.3E-39 315.1 25.8 254 670-958 1-256 (256)
309 cd05075 PTKc_Axl Catalytic dom 100.0 1.4E-34 3E-39 317.7 27.0 253 671-954 1-266 (272)
310 cd05109 PTKc_HER2 Catalytic do 100.0 1.3E-34 2.8E-39 319.5 26.9 254 666-953 4-262 (279)
311 cd05039 PTKc_Csk_like Catalyti 100.0 1.8E-34 3.8E-39 314.0 27.3 247 666-953 3-250 (256)
312 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-34 3.3E-39 322.2 26.9 251 669-954 2-270 (297)
313 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-34 2.4E-39 322.9 25.8 256 667-953 3-290 (295)
314 cd05040 PTKc_Ack_like Catalyti 100.0 1.9E-34 4.2E-39 313.8 27.0 249 675-954 1-253 (257)
315 PTZ00024 cyclin-dependent prot 100.0 1.6E-34 3.4E-39 327.8 27.2 273 669-961 8-319 (335)
316 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-34 3.2E-39 323.3 26.6 256 665-948 11-289 (304)
317 cd05111 PTK_HER3 Pseudokinase 100.0 2E-34 4.4E-39 318.2 27.2 255 666-954 4-263 (279)
318 KOG0603 Ribosomal protein S6 k 100.0 2E-35 4.3E-40 334.0 19.4 244 667-958 320-566 (612)
319 cd05050 PTKc_Musk Catalytic do 100.0 1.7E-34 3.7E-39 320.1 26.4 253 667-947 3-281 (288)
320 PF07714 Pkinase_Tyr: Protein 100.0 5.1E-35 1.1E-39 319.4 21.9 251 672-954 2-257 (259)
321 KOG4645 MAPKKK (MAP kinase kin 100.0 6.1E-37 1.3E-41 365.4 6.8 260 669-960 1235-1499(1509)
322 cd05046 PTK_CCK4 Pseudokinase 100.0 1.6E-34 3.5E-39 317.8 25.7 257 667-955 3-272 (275)
323 cd05073 PTKc_Hck Catalytic dom 100.0 2.6E-34 5.6E-39 313.7 26.9 249 665-946 2-251 (260)
324 cd05045 PTKc_RET Catalytic dom 100.0 2.6E-34 5.7E-39 319.0 27.2 250 670-947 1-278 (290)
325 cd05065 PTKc_EphR_B Catalytic 100.0 2E-34 4.3E-39 316.1 25.8 257 668-954 3-263 (269)
326 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.6E-34 5.7E-39 314.9 26.7 253 667-947 3-259 (268)
327 cd05060 PTKc_Syk_like Catalyti 100.0 3.2E-34 6.9E-39 312.3 27.1 246 675-950 1-250 (257)
328 cd07864 STKc_CDK12 Catalytic d 100.0 1.4E-34 3E-39 322.9 24.8 259 667-958 5-302 (302)
329 cd05118 STKc_CMGC Catalytic do 100.0 1E-34 2.2E-39 320.3 23.2 254 671-958 1-283 (283)
330 cd07840 STKc_CDK9_like Catalyt 100.0 2.1E-34 4.5E-39 318.4 25.7 255 671-958 1-287 (287)
331 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.7E-34 5.9E-39 322.8 27.0 255 665-947 8-285 (314)
332 cd07857 STKc_MPK1 Catalytic do 100.0 2.4E-34 5.1E-39 326.0 26.6 261 670-961 1-298 (332)
333 KOG1095 Protein tyrosine kinas 100.0 4.8E-35 1E-39 352.9 21.9 258 666-951 689-957 (1025)
334 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-34 3.2E-39 323.8 24.4 268 668-958 7-311 (311)
335 cd05095 PTKc_DDR2 Catalytic do 100.0 2.6E-34 5.7E-39 320.1 26.2 254 668-948 4-290 (296)
336 cd08222 STKc_Nek11 Catalytic d 100.0 1.2E-34 2.7E-39 316.0 22.9 256 670-958 1-260 (260)
337 cd07852 STKc_MAPK15 Catalytic 100.0 1.8E-34 3.9E-39 327.7 25.1 263 668-961 6-301 (337)
338 cd06618 PKc_MKK7 Catalytic dom 100.0 2.4E-34 5.3E-39 320.3 25.5 261 664-960 10-278 (296)
339 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.7E-34 5.8E-39 325.8 26.1 262 663-952 6-290 (334)
340 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.6E-34 7.9E-39 316.6 26.4 251 670-953 4-275 (283)
341 cd07830 STKc_MAK_like Catalyti 100.0 3.3E-34 7.1E-39 316.6 25.0 253 671-958 1-283 (283)
342 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.4E-34 1.4E-38 314.7 27.1 255 668-954 3-278 (284)
343 cd05057 PTKc_EGFR_like Catalyt 100.0 7.3E-34 1.6E-38 313.5 27.2 254 667-950 5-263 (279)
344 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.8E-34 8.3E-39 316.7 25.0 255 669-954 4-278 (284)
345 cd05083 PTKc_Chk Catalytic dom 100.0 4E-34 8.6E-39 311.0 24.6 241 667-946 4-245 (254)
346 cd05115 PTKc_Zap-70 Catalytic 100.0 8.3E-34 1.8E-38 309.4 27.2 244 676-948 2-248 (257)
347 KOG1151 Tousled-like protein k 100.0 1.3E-35 2.9E-40 317.2 12.2 268 667-960 461-746 (775)
348 cd05043 PTK_Ryk Pseudokinase d 100.0 7.5E-34 1.6E-38 313.5 26.4 255 666-948 3-269 (280)
349 cd07829 STKc_CDK_like Catalyti 100.0 3.9E-34 8.5E-39 315.5 24.1 254 671-958 1-282 (282)
350 cd05112 PTKc_Itk Catalytic dom 100.0 8.5E-34 1.8E-38 308.5 26.5 250 668-954 3-253 (256)
351 cd05085 PTKc_Fer Catalytic dom 100.0 1.5E-33 3.3E-38 305.4 28.1 243 675-948 1-244 (250)
352 smart00219 TyrKc Tyrosine kina 100.0 1E-33 2.2E-38 307.5 26.3 251 671-954 1-256 (258)
353 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-33 2.4E-38 306.6 26.5 246 675-954 1-247 (251)
354 cd05047 PTKc_Tie Catalytic dom 100.0 1.3E-33 2.8E-38 310.1 26.7 242 676-948 2-261 (270)
355 cd05576 STKc_RPK118_like Catal 100.0 3.6E-34 7.8E-39 308.4 21.2 233 680-958 4-237 (237)
356 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4E-34 8.6E-39 311.9 21.7 238 675-954 1-255 (258)
357 cd05056 PTKc_FAK Catalytic dom 100.0 1.3E-33 2.8E-38 309.9 25.7 253 667-954 4-260 (270)
358 KOG4278 Protein tyrosine kinas 100.0 1.4E-34 3E-39 319.7 17.9 255 662-947 260-515 (1157)
359 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-33 3.5E-38 314.9 26.3 255 666-950 4-263 (303)
360 cd05044 PTKc_c-ros Catalytic d 100.0 1.1E-33 2.3E-38 310.2 23.6 247 675-953 1-264 (269)
361 cd05042 PTKc_Aatyk Catalytic d 100.0 2.7E-33 5.8E-38 307.2 26.6 247 675-953 1-264 (269)
362 cd05058 PTKc_Met_Ron Catalytic 100.0 3.6E-33 7.9E-38 304.6 27.3 249 675-954 1-254 (262)
363 KOG1035 eIF-2alpha kinase GCN2 100.0 1.5E-34 3.3E-39 343.7 17.5 269 668-959 478-875 (1351)
364 cd08528 STKc_Nek10 Catalytic d 100.0 3.1E-33 6.7E-38 306.6 26.4 250 670-947 1-262 (269)
365 KOG0668 Casein kinase II, alph 100.0 1.2E-34 2.6E-39 287.3 13.4 252 667-961 36-328 (338)
366 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.6E-33 5.6E-38 306.4 25.2 239 675-955 1-260 (262)
367 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4E-33 8.7E-38 305.9 26.1 247 675-953 1-264 (269)
368 KOG1006 Mitogen-activated prot 100.0 5.5E-35 1.2E-39 295.9 10.0 260 666-960 61-332 (361)
369 KOG1187 Serine/threonine prote 100.0 1.1E-33 2.3E-38 319.8 21.6 253 668-952 74-349 (361)
370 KOG0587 Traf2- and Nck-interac 100.0 6.6E-34 1.4E-38 329.0 20.0 260 668-962 18-289 (953)
371 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.5E-33 7.6E-38 308.3 25.1 256 668-950 3-278 (284)
372 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.9E-33 8.4E-38 307.2 25.0 238 676-955 2-272 (274)
373 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.5E-33 9.8E-38 305.8 25.4 253 671-954 1-267 (273)
374 KOG0665 Jun-N-terminal kinase 100.0 1.9E-34 4.1E-39 300.1 13.4 266 668-974 16-327 (369)
375 KOG0199 ACK and related non-re 100.0 4.9E-34 1.1E-38 320.3 17.1 257 668-952 109-369 (1039)
376 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 7.8E-33 1.7E-37 301.2 24.5 236 675-954 1-256 (259)
377 PHA02882 putative serine/threo 100.0 1.3E-32 2.8E-37 306.2 26.0 259 666-954 9-291 (294)
378 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.1E-32 4.4E-37 300.3 26.6 248 675-954 1-264 (268)
379 KOG1290 Serine/threonine prote 100.0 3.1E-33 6.7E-38 304.5 19.6 141 660-805 69-222 (590)
380 KOG0669 Cyclin T-dependent kin 100.0 7.1E-35 1.5E-39 292.5 5.7 264 667-960 15-320 (376)
381 KOG4257 Focal adhesion tyrosin 100.0 3.1E-33 6.8E-38 310.2 17.7 257 667-954 387-651 (974)
382 KOG0670 U4/U6-associated splic 100.0 6.3E-34 1.4E-38 310.5 9.8 257 666-960 429-751 (752)
383 KOG4250 TANK binding protein k 100.0 3.6E-33 7.9E-38 317.7 15.8 244 670-943 14-296 (732)
384 PLN03225 Serine/threonine-prot 100.0 2.2E-32 4.8E-37 327.6 22.8 262 666-966 129-461 (566)
385 KOG1094 Discoidin domain recep 100.0 9.9E-33 2.2E-37 305.0 17.6 255 666-952 535-797 (807)
386 KOG0664 Nemo-like MAPK-related 100.0 4.4E-34 9.5E-39 289.3 5.8 261 670-964 54-352 (449)
387 KOG0196 Tyrosine kinase, EPH ( 100.0 3.6E-33 7.9E-38 317.8 12.7 264 665-956 625-895 (996)
388 PLN03224 probable serine/threo 100.0 3.1E-31 6.6E-36 309.9 25.6 266 665-960 141-505 (507)
389 smart00220 S_TKc Serine/Threon 100.0 5E-31 1.1E-35 282.5 24.6 242 681-958 1-244 (244)
390 KOG1167 Serine/threonine prote 100.0 2.3E-31 5E-36 287.5 13.5 281 668-962 35-388 (418)
391 KOG0984 Mitogen-activated prot 100.0 5.8E-31 1.3E-35 257.9 13.7 224 662-916 39-271 (282)
392 KOG1027 Serine/threonine prote 100.0 2.3E-31 5E-36 306.7 12.2 251 671-960 511-772 (903)
393 KOG0576 Mitogen-activated prot 100.0 7.1E-32 1.5E-36 303.0 7.1 292 668-995 14-316 (829)
394 PRK13560 hypothetical protein; 100.0 1.5E-29 3.2E-34 320.9 27.4 411 168-620 183-620 (807)
395 KOG1025 Epidermal growth facto 100.0 2.7E-30 6E-35 294.9 17.9 253 670-952 697-954 (1177)
396 KOG0200 Fibroblast/platelet-de 100.0 5.4E-29 1.2E-33 301.2 23.7 264 663-955 290-579 (609)
397 KOG1152 Signal transduction se 100.0 4.5E-30 9.8E-35 284.0 10.4 202 668-900 560-771 (772)
398 KOG2052 Activin A type IB rece 100.0 1E-28 2.3E-33 267.1 18.4 243 669-945 211-493 (513)
399 PLN00113 leucine-rich repeat r 100.0 7.4E-29 1.6E-33 320.2 20.7 238 669-950 690-946 (968)
400 KOG3653 Transforming growth fa 100.0 9.7E-29 2.1E-33 269.3 16.8 244 667-946 208-494 (534)
401 cd00180 PKc Catalytic domain o 99.9 3.1E-26 6.7E-31 239.0 23.6 213 677-956 1-215 (215)
402 PRK09776 putative diguanylate 99.9 1.5E-27 3.2E-32 312.5 16.9 382 176-596 270-661 (1092)
403 KOG1024 Receptor-like protein 99.9 6.1E-27 1.3E-31 248.6 17.7 253 666-946 281-546 (563)
404 KOG1345 Serine/threonine kinas 99.9 1.9E-27 4.2E-32 241.8 9.6 253 669-959 24-291 (378)
405 smart00221 STYKc Protein kinas 99.9 1.1E-25 2.3E-30 238.9 22.5 215 671-914 1-218 (225)
406 KOG0603 Ribosomal protein S6 k 99.9 2.8E-27 6.1E-32 268.2 5.0 275 676-994 1-280 (612)
407 PLN00181 protein SPA1-RELATED; 99.9 3E-26 6.5E-31 288.3 13.3 228 725-961 28-271 (793)
408 TIGR02040 PpsR-CrtJ transcript 99.9 3.2E-25 6.9E-30 261.2 17.4 360 195-593 2-368 (442)
409 KOG1163 Casein kinase (serine/ 99.9 9.6E-25 2.1E-29 218.8 15.0 274 665-966 11-301 (341)
410 KOG1165 Casein kinase (serine/ 99.9 5.6E-24 1.2E-28 222.4 17.5 222 665-913 24-254 (449)
411 PRK13560 hypothetical protein; 99.9 5.1E-24 1.1E-28 270.3 19.3 382 176-596 54-472 (807)
412 smart00750 KIND kinase non-cat 99.9 3.1E-24 6.8E-29 219.7 12.0 161 754-959 1-169 (176)
413 KOG0606 Microtubule-associated 99.9 1.9E-24 4.2E-29 255.4 11.1 264 669-989 83-347 (1205)
414 KOG1164 Casein kinase (serine/ 99.9 1.5E-22 3.2E-27 227.9 23.6 253 670-946 19-288 (322)
415 KOG0590 Checkpoint kinase and 99.9 1.1E-24 2.4E-29 260.3 6.0 261 672-962 321-592 (601)
416 COG0515 SPS1 Serine/threonine 99.9 1.1E-21 2.3E-26 218.7 26.8 262 671-960 2-280 (384)
417 PRK09188 serine/threonine prot 99.9 1.1E-22 2.4E-27 228.6 16.9 176 665-872 14-194 (365)
418 PRK11359 cyclic-di-GMP phospho 99.9 1.6E-20 3.5E-25 238.2 23.8 242 186-593 9-255 (799)
419 KOG1240 Protein kinase contain 99.9 3.8E-22 8.2E-27 235.8 6.5 262 670-973 24-316 (1431)
420 TIGR02938 nifL_nitrog nitrogen 99.8 8.2E-21 1.8E-25 226.5 13.3 245 188-596 3-258 (494)
421 PRK10359 lipopolysaccharide co 99.8 1.1E-20 2.4E-25 197.7 12.1 175 666-892 28-216 (232)
422 cd05147 RIO1_euk RIO kinase fa 99.8 2.9E-20 6.2E-25 192.4 12.7 141 674-820 2-166 (190)
423 PF14531 Kinase-like: Kinase-l 99.8 2.1E-20 4.5E-25 201.4 10.3 236 670-942 13-288 (288)
424 KOG0195 Integrin-linked kinase 99.8 3.9E-20 8.4E-25 188.3 7.8 245 665-946 186-437 (448)
425 cd05145 RIO1_like RIO kinase f 99.8 4.4E-19 9.5E-24 184.1 15.6 144 673-822 1-168 (190)
426 PRK12274 serine/threonine prot 99.8 1.2E-18 2.6E-23 178.5 16.2 202 672-902 5-211 (218)
427 KOG4158 BRPK/PTEN-induced prot 99.8 3.4E-19 7.4E-24 190.4 7.9 204 727-957 274-515 (598)
428 PRK10345 hypothetical protein; 99.8 6E-18 1.3E-22 176.8 15.2 135 673-818 6-156 (210)
429 KOG1166 Mitotic checkpoint ser 99.7 2.6E-18 5.6E-23 208.9 11.3 197 666-896 695-901 (974)
430 KOG0606 Microtubule-associated 99.7 3.9E-18 8.4E-23 202.5 8.0 297 667-966 802-1103(1205)
431 smart00090 RIO RIO-like kinase 99.7 3.1E-17 6.8E-22 175.6 13.2 145 670-821 29-198 (237)
432 PRK14879 serine/threonine prot 99.7 3.6E-16 7.8E-21 165.1 15.8 138 674-820 1-143 (211)
433 KOG1033 eIF-2alpha kinase PEK/ 99.7 2E-17 4.4E-22 185.1 4.9 185 742-958 329-515 (516)
434 TIGR03724 arch_bud32 Kae1-asso 99.7 5.7E-16 1.2E-20 162.0 15.0 133 676-820 1-138 (199)
435 cd05144 RIO2_C RIO kinase fami 99.7 7.5E-16 1.6E-20 161.1 13.3 140 670-822 16-176 (198)
436 KOG0590 Checkpoint kinase and 99.6 1.2E-17 2.6E-22 200.1 -1.4 264 668-960 19-291 (601)
437 PRK09605 bifunctional UGMP fam 99.6 2E-15 4.4E-20 181.6 15.6 139 669-820 333-476 (535)
438 PF13426 PAS_9: PAS domain; PD 99.6 5.5E-15 1.2E-19 136.3 14.2 104 199-305 1-104 (104)
439 PF13426 PAS_9: PAS domain; PD 99.6 7.7E-15 1.7E-19 135.3 12.9 104 482-588 1-104 (104)
440 cd05119 RIO RIO kinase family, 99.6 6.4E-15 1.4E-19 152.4 13.2 139 673-821 1-164 (187)
441 KOG1023 Natriuretic peptide re 99.6 5.3E-15 1.1E-19 169.4 12.9 198 723-946 1-215 (484)
442 PRK01723 3-deoxy-D-manno-octul 99.6 3.1E-14 6.7E-19 152.9 15.3 137 675-820 37-191 (239)
443 cd05120 APH_ChoK_like Aminogly 99.5 5.4E-14 1.2E-18 139.0 12.3 132 673-820 2-138 (155)
444 PF08448 PAS_4: PAS fold; Int 99.5 1.9E-13 4.2E-18 127.4 12.4 110 195-308 1-110 (110)
445 PF00989 PAS: PAS fold; Inter 99.5 3.4E-13 7.3E-18 126.4 12.7 112 189-303 1-113 (113)
446 PRK09776 putative diguanylate 99.5 7.5E-14 1.6E-18 183.5 9.8 267 168-470 389-663 (1092)
447 PF08448 PAS_4: PAS fold; Int 99.5 3E-13 6.5E-18 126.1 11.1 110 478-591 1-110 (110)
448 PF00989 PAS: PAS fold; Inter 99.5 4.1E-13 9E-18 125.8 11.5 111 473-586 2-113 (113)
449 KOG0601 Cyclin-dependent kinas 99.4 7.7E-14 1.7E-18 159.8 6.3 262 667-961 112-385 (524)
450 PRK13559 hypothetical protein; 99.4 6.1E-12 1.3E-16 144.3 19.2 129 186-314 40-168 (361)
451 PRK13559 hypothetical protein; 99.4 4.4E-12 9.5E-17 145.5 17.1 121 473-593 44-164 (361)
452 PRK13557 histidine kinase; Pro 99.4 2.2E-12 4.7E-17 156.1 14.6 148 472-619 30-177 (540)
453 PRK13557 histidine kinase; Pro 99.4 4E-12 8.6E-17 153.8 16.6 132 183-314 24-155 (540)
454 PRK11091 aerobic respiration c 99.4 1.8E-12 3.8E-17 164.1 12.6 142 171-315 137-278 (779)
455 TIGR01982 UbiB 2-polyprenylphe 99.4 2.1E-12 4.6E-17 150.5 11.8 184 627-822 76-308 (437)
456 PRK04750 ubiB putative ubiquin 99.4 4.1E-13 8.8E-18 158.0 5.7 187 628-822 79-315 (537)
457 PRK11091 aerobic respiration c 99.3 5.2E-12 1.1E-16 159.9 14.6 138 455-595 137-275 (779)
458 KOG1243 Protein kinase [Genera 99.3 5.5E-11 1.2E-15 137.4 17.0 240 670-964 14-255 (690)
459 KOG1266 Protein kinase [Signal 99.3 9.1E-12 2E-16 131.5 7.6 211 722-964 120-340 (458)
460 cd05146 RIO3_euk RIO kinase fa 99.3 1E-10 2.3E-15 120.2 15.2 140 674-821 2-174 (197)
461 PRK13558 bacterio-opsin activa 99.2 8.4E-11 1.8E-15 146.2 17.5 127 189-315 148-274 (665)
462 KOG0601 Cyclin-dependent kinas 99.2 6.4E-12 1.4E-16 144.2 5.9 252 666-959 262-518 (524)
463 cd05151 ChoK Choline Kinase (C 99.2 3.6E-11 7.7E-16 122.1 10.2 127 674-819 3-135 (170)
464 KOG3087 Serine/threonine prote 99.2 1.2E-10 2.5E-15 114.6 12.5 146 673-820 11-165 (229)
465 TIGR02040 PpsR-CrtJ transcript 99.2 6.9E-11 1.5E-15 139.6 11.8 133 170-311 236-369 (442)
466 PRK10060 RNase II stability mo 99.2 2E-10 4.3E-15 142.0 16.1 136 176-315 98-235 (663)
467 PRK13558 bacterio-opsin activa 99.2 3E-10 6.5E-15 141.3 16.6 122 474-595 150-271 (665)
468 COG3642 Mn2+-dependent serine/ 99.1 3.3E-10 7.2E-15 112.3 12.4 134 675-820 2-140 (204)
469 PRK10060 RNase II stability mo 99.1 1.7E-10 3.8E-15 142.5 12.2 118 474-595 113-232 (663)
470 TIGR00229 sensory_box PAS doma 99.1 9E-10 2E-14 100.2 12.9 120 189-312 3-123 (124)
471 TIGR02938 nifL_nitrog nitrogen 99.1 1.6E-10 3.6E-15 137.8 10.1 118 474-594 6-123 (494)
472 PF08447 PAS_3: PAS fold; Int 99.1 7.3E-10 1.6E-14 99.9 10.0 86 497-583 1-91 (91)
473 PRK11359 cyclic-di-GMP phospho 99.0 1E-09 2.2E-14 139.6 14.2 141 167-314 118-259 (799)
474 KOG3741 Poly(A) ribonuclease s 99.0 7.8E-09 1.7E-13 116.0 18.2 205 682-941 289-512 (655)
475 TIGR00229 sensory_box PAS doma 99.0 2.8E-09 6E-14 96.9 11.7 116 474-593 5-121 (124)
476 PF08447 PAS_3: PAS fold; Int 99.0 2.9E-09 6.3E-14 95.9 10.0 86 214-300 1-91 (91)
477 cd05154 ACAD10_11_like Acyl-Co 99.0 2.7E-09 5.9E-14 113.2 11.2 140 675-820 4-206 (223)
478 PRK15123 lipopolysaccharide co 98.9 5.8E-08 1.3E-12 105.6 16.7 134 684-819 37-193 (268)
479 KOG2137 Protein kinase [Signal 98.8 1.9E-09 4.1E-14 125.5 4.0 173 778-972 106-282 (700)
480 PF01163 RIO1: RIO1 family; I 98.8 3E-08 6.6E-13 101.7 11.9 127 684-820 1-155 (188)
481 cd00130 PAS PAS domain; PAS mo 98.8 1.4E-07 3.1E-12 81.2 13.9 103 481-586 1-103 (103)
482 COG3829 RocR Transcriptional r 98.8 5.9E-08 1.3E-12 110.6 14.1 221 192-591 4-224 (560)
483 cd00130 PAS PAS domain; PAS mo 98.8 1.8E-07 3.8E-12 80.6 13.9 102 199-303 2-103 (103)
484 COG4248 Uncharacterized protei 98.8 1.3E-07 2.7E-12 103.8 15.4 238 673-947 15-292 (637)
485 PRK11073 glnL nitrogen regulat 98.7 3.2E-08 6.9E-13 112.9 10.5 113 474-596 9-121 (348)
486 TIGR02966 phoR_proteo phosphat 98.7 4.3E-08 9.4E-13 110.4 11.1 114 185-314 2-115 (333)
487 KOG0501 K+-channel KCNQ [Inorg 98.7 9.9E-08 2.2E-12 106.8 12.6 120 474-593 16-140 (971)
488 PRK11360 sensory histidine kin 98.7 1E-07 2.2E-12 116.7 14.3 139 474-618 264-403 (607)
489 PRK11360 sensory histidine kin 98.7 2.1E-07 4.5E-12 114.0 16.6 128 182-315 255-383 (607)
490 PRK11073 glnL nitrogen regulat 98.7 1.8E-07 3.9E-12 106.7 14.5 117 188-314 6-122 (348)
491 PF13596 PAS_10: PAS domain; P 98.7 8.9E-08 1.9E-12 89.2 8.9 106 191-304 1-106 (106)
492 COG0478 RIO-like serine/threon 98.6 1.8E-07 3.9E-12 98.5 10.7 137 671-819 93-250 (304)
493 PF06293 Kdo: Lipopolysacchari 98.6 5.6E-07 1.2E-11 94.6 14.1 126 693-820 31-170 (206)
494 TIGR02966 phoR_proteo phosphat 98.6 1.8E-07 3.9E-12 105.3 11.0 103 474-592 8-110 (333)
495 PRK09902 hypothetical protein; 98.5 1.2E-06 2.7E-11 90.4 14.0 141 678-820 27-179 (216)
496 PF12860 PAS_7: PAS fold 98.5 3.6E-07 7.7E-12 86.5 9.1 105 195-311 1-115 (115)
497 PF06176 WaaY: Lipopolysacchar 98.5 1.1E-06 2.3E-11 91.1 13.0 141 665-818 27-181 (229)
498 PF12860 PAS_7: PAS fold 98.5 3.9E-07 8.5E-12 86.2 8.8 105 478-594 1-115 (115)
499 KOG0501 K+-channel KCNQ [Inorg 98.5 4.2E-07 9.2E-12 101.9 10.0 111 201-311 29-141 (971)
500 PF13596 PAS_10: PAS domain; P 98.5 4.4E-07 9.5E-12 84.5 8.4 106 474-587 1-106 (106)
No 1
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-55 Score=466.20 Aligned_cols=336 Identities=54% Similarity=0.972 Sum_probs=293.4
Q ss_pred CCCCCCCCCchHHHHhhh-ccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHH
Q 001869 643 PKPHRKDSPPWKAIQKIL-DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE 721 (1002)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~-~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~ 721 (1002)
.+||+....-|.++..+. ..+..+..++|++++.||.|.-|+||+|+..+++..+|+|++.+..+..+....+...|.+
T Consensus 50 ~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~e 129 (459)
T KOG0610|consen 50 NKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTERE 129 (459)
T ss_pred CCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHH
Confidence 467777667787777665 4667788999999999999999999999999999999999999998888889999999999
Q ss_pred HHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCC
Q 001869 722 ILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 722 il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~N 801 (1002)
||..++||.++.||..|+..++.|+|||||+||+|..+++++..+.+++..+++|+..++.||+|||-.|||+|||||+|
T Consensus 130 IL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN 209 (459)
T KOG0610|consen 130 ILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN 209 (459)
T ss_pred HHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcc-----------------------hhhhhcccCC-----CCCccccccC-
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT-----------------------NEKKRRHKGQ-----QNPVFMAEPM- 852 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~-----------------------~~~~~~~~~~-----~~~~~~~~~~- 852 (1002)
|||.++|+|.|+||.++......+....... ...++..+.. ..+....++.
T Consensus 210 ILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~ 289 (459)
T KOG0610|consen 210 ILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTG 289 (459)
T ss_pred eEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCC
Confidence 9999999999999999876543222221100 0000000000 0111222333
Q ss_pred cccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Q 001869 853 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMY 932 (1002)
Q Consensus 853 ~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~ 932 (1002)
..+.+++||-.|+|||++.|..++.++|+|+||+++|||++|..||.|.+..+.+.+|+...+.+|..+..+..++|||+
T Consensus 290 ~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr 369 (459)
T KOG0610|consen 290 ARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIR 369 (459)
T ss_pred ccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 933 RLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 933 ~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
++|.+||.+|+.+..+|.+|++||||++++|+.+++..||.++.|.
T Consensus 370 ~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~ 415 (459)
T KOG0610|consen 370 KLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPV 415 (459)
T ss_pred HHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCcc
Confidence 9999999999999999999999999999999999999999775443
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.1e-54 Score=473.94 Aligned_cols=320 Identities=42% Similarity=0.708 Sum_probs=273.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|+++++||+|+||.||+|+-+.||.+||+|++++..+....++..+..|..||...++|+||++|..|++.+++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||||++||++..+|.+. +.|+++.+++|+.+++.|++.||+.|+|||||||+|+||+..|++||+|||++.-+...
T Consensus 217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999999875 66999999999999999999999999999999999999999999999999999654432
Q ss_pred CCCCCCcch--hhhhcc--cCCCCC----------------ccccccCcccccccCCCcccccccccCCCCCChhhHHHH
Q 001869 825 PQLLLPTTN--EKKRRH--KGQQNP----------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 884 (1002)
Q Consensus 825 ~~~~~~~~~--~~~~~~--~~~~~~----------------~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSl 884 (1002)
......... ...... ....-+ .+.........+.+|||.|||||++.+..|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 222110000 000000 000000 000011122346799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 885 GILLYEMLYGYTPFRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 885 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
|||+||||.|.+||.+.++.+.+.+|+... +.+|....++++++|||.+||+ ||++|+. ..+++||.+||||++++
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccCC
Confidence 999999999999999999999999999765 7889888999999999999999 9999999 66799999999999999
Q ss_pred hhhhhccCCCCCCCCCCCCccccccccC
Q 001869 963 WALVRCMNPPELDAPLFATDTEKEYKVV 990 (1002)
Q Consensus 963 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 990 (1002)
|+.++...+| .+|.+.-..+-.|++.
T Consensus 453 W~~l~~~~ap--fvP~v~~~~DT~yFdd 478 (550)
T KOG0605|consen 453 WDHLREMPAP--FVPQVNSELDTQYFDD 478 (550)
T ss_pred cchhhcCCCC--CCCCCCCccccccccc
Confidence 9999999888 7788777777666653
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-54 Score=456.36 Aligned_cols=283 Identities=45% Similarity=0.776 Sum_probs=256.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||+||+++.+.+++.||+|++++..............|..||..++||+||.++..|++.+.+|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 45679999999999999999999999999999999999998888888899999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|+||+.||.|+-.|++. +.+++..++.|+..|+.||.|||++|||||||||+|||++.+|+++|+|||+++..-
T Consensus 102 lVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~--- 176 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL--- 176 (357)
T ss_pred EEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc---
Confidence 999999999999999875 569999999999999999999999999999999999999999999999999996421
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....+.++|||+.|||||++.+.+|+..+|+||||+++|+|++|.+||.+.+...
T Consensus 177 ------------------------~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~ 232 (357)
T KOG0598|consen 177 ------------------------KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK 232 (357)
T ss_pred ------------------------cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH
Confidence 11234556899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.+.+|+.++...+.. ..+.++++||+++|..||++|+.....+.+|.+||||.+++|+.+.....+....|.
T Consensus 233 ~~~~I~~~k~~~~p~-~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~ 304 (357)
T KOG0598|consen 233 MYDKILKGKLPLPPG-YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPN 304 (357)
T ss_pred HHHHHhcCcCCCCCc-cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecC
Confidence 999999988444332 368899999999999999999976667999999999999999999655555445565
No 4
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-52 Score=431.11 Aligned_cols=274 Identities=46% Similarity=0.842 Sum_probs=256.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
..+++|+.++.||.|+||.|.+++++.+|..||+|++.+..+....++....+|..+|+.+.||+++++++.|.+.+.+|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 45789999999999999999999999999999999999998888889999999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||++||.|+.++++. +.+++..+++|+.||+.||+|||+++|++|||||+|||++.+|++||+|||+|+...
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 999999999999999875 569999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
..+.+.||||.|+|||++...+|+.++|.||||+++|||+.|.+||...+...
T Consensus 196 ---------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~ 248 (355)
T KOG0616|consen 196 ---------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ 248 (355)
T ss_pred ---------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence 22457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhh--hccCCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPE 973 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~ 973 (1002)
++.+|+.+++.+|.. .++++++||+++|+.|-.+|.... .+.++|.+||||++++|..+ +.+++|-
T Consensus 249 iY~KI~~~~v~fP~~--fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~ 317 (355)
T KOG0616|consen 249 IYEKILEGKVKFPSY--FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPF 317 (355)
T ss_pred HHHHHHhCcccCCcc--cCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCC
Confidence 999999999999875 688999999999999999997654 47999999999999999988 6666664
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-52 Score=458.40 Aligned_cols=287 Identities=39% Similarity=0.678 Sum_probs=259.4
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
...+|+.++.||+|+|++|++|+++.+++.||||++.+..+.....++.+..|..+|.+| +||.|++||..|++...+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 356999999999999999999999999999999999998887888888999999999999 8999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|+||+++|+|.+++++. +.|++...+.|+.||+.||+|||++|||||||||+|||++.+|++||.|||.|+.+....
T Consensus 151 FvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred EEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 999999999999999885 669999999999999999999999999999999999999999999999999998876543
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
... ..+...........+++||..|.+||+|.....++.+|||+||||||.|+.|.+||.+.+...
T Consensus 229 ~~~--------------~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl 294 (604)
T KOG0592|consen 229 KSQ--------------ENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL 294 (604)
T ss_pred ccc--------------cCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence 221 011111111112367999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 975 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~ 975 (1002)
++++|+.-.+.||.. .++.+++||+++|..||.+|+| +.+|.+||||.+++|..+....||++.
T Consensus 295 iFqkI~~l~y~fp~~--fp~~a~dLv~KLLv~dp~~Rlt----~~qIk~HpFF~~Vdw~nlw~~~PP~l~ 358 (604)
T KOG0592|consen 295 IFQKIQALDYEFPEG--FPEDARDLIKKLLVRDPSDRLT----SQQIKAHPFFEGVDWENLWQQTPPKLQ 358 (604)
T ss_pred HHHHHHHhcccCCCC--CCHHHHHHHHHHHccCcccccc----HHHHhhCcccccCChhhhhhcCCCccc
Confidence 999999999888875 5689999999999999999999 999999999999999999999999763
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-51 Score=457.36 Aligned_cols=256 Identities=33% Similarity=0.576 Sum_probs=242.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|+..+.||+|||+.||.+++..+|..||+|++.+..+........+.+|++|.+.|+|||||+++++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 57999999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+|..++|..+++++ +.+++..++.+++||+.||.|||+++|||||||..|+|++++-+|||+|||+|+....+
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~---- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD---- 171 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc----
Confidence 999999999999864 67999999999999999999999999999999999999999999999999999765422
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....+.||||.|.|||++....++..+||||+||+||-|++|++||...+..+.+.
T Consensus 172 -----------------------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~ 228 (592)
T KOG0575|consen 172 -----------------------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN 228 (592)
T ss_pred -----------------------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH
Confidence 123457899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+|....+.+|. .+|.++++||.+||+.||.+||| +.++|.|+||+
T Consensus 229 ~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rps----l~~vL~h~Ff~ 273 (592)
T KOG0575|consen 229 KIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPS----LDEVLDHPFFK 273 (592)
T ss_pred HHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCC----HHHHhcCHhhh
Confidence 99999999888 57999999999999999999999 99999999994
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-51 Score=440.68 Aligned_cols=262 Identities=33% Similarity=0.503 Sum_probs=230.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChh----HHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN----KVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
..+.|.+.+.||+|+||.|-+|..+.||+.||||++++....... ....+.+|++||++|+|||||+++++|+..+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 357899999999999999999999999999999999987654422 3445679999999999999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC---CcEEEEeccCCc
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSC 819 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~ 819 (1002)
+.|||||||+||+|++.+-.+ +.+.+...+.+++||+.||.|||++||+||||||+|||++.+ -.+||+|||+|+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 999999999999999999875 558999999999999999999999999999999999999876 679999999997
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC---CChhhHHHHHHHHHHHHcCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~---~~~sDIwSlGvil~elltG~~ 896 (1002)
..+. .....++||||.|.|||++.+... ..++|||||||+||-+++|.+
T Consensus 328 ~~g~----------------------------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~p 379 (475)
T KOG0615|consen 328 VSGE----------------------------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYP 379 (475)
T ss_pred cccc----------------------------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCC
Confidence 6431 122357899999999999977543 338899999999999999999
Q ss_pred CCCCCChHH-HHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 897 PFRGKTRQK-TFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 897 Pf~~~~~~~-~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
||.+..... ...+|.++.+.+. .+..+|.++.+||..||..||++||| +.++|+||||+.+.
T Consensus 380 PFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s----~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 380 PFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPS----ADEALNHPWFKDAP 444 (475)
T ss_pred CcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcC----HHHHhcChhhhccc
Confidence 998866555 7788888887664 45678999999999999999999999 99999999999654
No 8
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-50 Score=427.77 Aligned_cols=263 Identities=28% Similarity=0.463 Sum_probs=235.2
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT- 742 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 742 (1002)
..+...+.+.++.||+|..|+||+|.|+.|++.+|+|++.. ..+....+++.+|+++++..+|||||.+|+.|..+.
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE 151 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence 34566789999999999999999999999999999999953 346777889999999999999999999999999988
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
.++|+||||+||+|.++++.. +.+++..+..++.+|++||.|||+ ++||||||||+|||++..|.|||||||.+..+
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGIL 229 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHh
Confidence 599999999999999999875 569999999999999999999996 89999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.. ....+++||..|||||.+.+..|+.++||||||+.++|+++|+.||...
T Consensus 230 vn-----------------------------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 230 VN-----------------------------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred hh-----------------------------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 31 1346789999999999999999999999999999999999999999874
Q ss_pred -----ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 902 -----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 902 -----~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
+..+.+..|+.+..+-.....+|+++++||.+||++||.+|++ +.||++|||++....
T Consensus 281 ~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s----~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 281 NPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPS----AKQLLQHPFIKKFED 343 (364)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCC----HHHHhcCHHHhhccc
Confidence 6678888888865443333368999999999999999999999 999999999997543
No 9
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-49 Score=450.73 Aligned_cols=288 Identities=40% Similarity=0.756 Sum_probs=261.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+.+++|+++++||+|.||+|+++..+.+++.||||++++..+.....+.....|..|+... +||+++.++.+|++.++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 67889999999999999999999999999999999999999999999999999999999888 59999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+.||++....+ .+.+++..++.|+..|+.||.|||++||||||||.+|||+|.+|++||+|||+++..-
T Consensus 444 l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m- 519 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM- 519 (694)
T ss_pred EEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC-
Confidence 999999999999554443 3669999999999999999999999999999999999999999999999999996421
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.....++++||||.|||||++.+..|+.++|.|||||+||||+.|..||.+++.
T Consensus 520 --------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE 573 (694)
T KOG0694|consen 520 --------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE 573 (694)
T ss_pred --------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 011346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCc
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 982 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 982 (1002)
.+.+..|+..+..+|.+ +|.++.++|+++|.+||++|+.+. ..+.+|.+||||+.++|.++...+.+....|....+
T Consensus 574 ee~FdsI~~d~~~yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~ 651 (694)
T KOG0694|consen 574 EEVFDSIVNDEVRYPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGP 651 (694)
T ss_pred HHHHHHHhcCCCCCCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCCh
Confidence 99999999999988876 689999999999999999999974 358999999999999999996555555578887665
Q ss_pred cc
Q 001869 983 TE 984 (1002)
Q Consensus 983 ~~ 984 (1002)
.+
T Consensus 652 ~D 653 (694)
T KOG0694|consen 652 ED 653 (694)
T ss_pred hh
Confidence 44
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.5e-48 Score=395.40 Aligned_cols=260 Identities=27% Similarity=0.467 Sum_probs=222.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
++.|+.+..+|+|+||+||+|+++.||+.||||.+... ..++...+-.++|+.+|++|+|||+|.++++|.....+++|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES-EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 35799999999999999999999999999999998654 23455556668999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||+. ++.+-+.+.+. .++.+.++.|++|++.|+.|+|++++|||||||+|||++.+|.+||||||+|+.+..
T Consensus 80 FE~~dh-TvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~---- 153 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA---- 153 (396)
T ss_pred eeecch-HHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC----
Confidence 999954 55555665543 389999999999999999999999999999999999999999999999999976542
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
+......++.|.+|+|||.+.+ ..|+..+||||+||++.||++|.+.|.|.+..++
T Consensus 154 -----------------------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ 210 (396)
T KOG0593|consen 154 -----------------------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ 210 (396)
T ss_pred -----------------------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH
Confidence 1222344689999999999988 7899999999999999999999999999999888
Q ss_pred HHHHHhC-------------------CCCCCCC----------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 907 FANILHK-------------------DLKFPSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 907 ~~~i~~~-------------------~~~~~~~----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
+..|... .+.+|.. +..+.-+.+|+++||..||++|++ .+++|.|||
T Consensus 211 Ly~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s----c~qll~H~y 286 (396)
T KOG0593|consen 211 LYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS----CEQLLHHPY 286 (396)
T ss_pred HHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc----HHHHhcChH
Confidence 8776541 1122221 345667789999999999999999 999999999
Q ss_pred cCCC
Q 001869 958 FKGV 961 (1002)
Q Consensus 958 f~~~ 961 (1002)
|.++
T Consensus 287 Fd~~ 290 (396)
T KOG0593|consen 287 FDGF 290 (396)
T ss_pred HHHH
Confidence 9764
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-46 Score=403.32 Aligned_cols=259 Identities=28% Similarity=0.493 Sum_probs=229.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|.+.+.||+|+|++||+|+++.++..||||.+.+..+ .+...+.+..|+.||+.++|||||.+++++...+.+|+|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4689999999999999999999999999999999987644 566778889999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC------CcEEEEeccCCccc
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------GHVSLTDFDLSCLT 821 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~------g~vkL~DFG~a~~~ 821 (1002)
||||.||+|.+|+++. +.+++..++.++.||+.||++||+++||||||||.|||++.+ -.+||+|||+|+.+
T Consensus 88 MEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999999885 459999999999999999999999999999999999999864 46899999999765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.. .....+.||+|.|||||++....|+.|+|+||+|+|+|+|++|++||...
T Consensus 166 ~~----------------------------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 166 QP----------------------------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred Cc----------------------------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 42 23345789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCC-CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 902 TRQKTFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~-~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+..+.+..+.++.-..+.. ...+....+|+...|+.+|..|.+ ..+-+.|+++..-
T Consensus 218 t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~----~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 218 TPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRIS----FEDFFDHPFLAAN 274 (429)
T ss_pred CHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCc----hHHhhhhhhcccC
Confidence 9999888776654433332 224555678999999999999999 7888899998763
No 12
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-46 Score=421.14 Aligned_cols=264 Identities=31% Similarity=0.534 Sum_probs=240.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++.+.||.|+.|.|-+|++..||+.+|||++.+...........+.+|+-||+.+.||||+++|+++.+..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 46899999999999999999999999999999999887555566677889999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
.||++||.|++++-+. +.+++.....+++||+.|+.|||..+|+||||||+|+|++..+.+||+|||+|.....
T Consensus 91 lEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~---- 164 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP---- 164 (786)
T ss_pred EEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC----
Confidence 9999999999999875 5699999999999999999999999999999999999999999999999999965321
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
...-.+.||+|.|.|||++.|.+|. .++||||.|||||.|++|++||.+++....
T Consensus 165 ------------------------gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L 220 (786)
T KOG0588|consen 165 ------------------------GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL 220 (786)
T ss_pred ------------------------CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence 1233467999999999999998875 599999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhh
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
+.++.++.+..|. .++.++++||.+||..||.+|+| .++|++|||+.+.+-....
T Consensus 221 LlKV~~G~f~MPs--~Is~eaQdLLr~ml~VDp~~RiT----~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 221 LLKVQRGVFEMPS--NISSEAQDLLRRMLDVDPSTRIT----TEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred HHHHHcCcccCCC--cCCHHHHHHHHHHhccCcccccc----HHHHhhCchhhcCCCCChh
Confidence 9999999988884 57999999999999999999999 9999999999996554444
No 13
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-47 Score=386.01 Aligned_cols=257 Identities=28% Similarity=0.460 Sum_probs=224.6
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEE-EEEeCCe-E
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTH-V 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~~-~ 744 (1002)
.+..|++++.||+|+||.||++.+..+|+.+|.|.+.-+ ..+......+..|+.+|++|+|||||++++ .|..++. +
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 456899999999999999999999999999999999855 446677788999999999999999999998 5555554 8
Q ss_pred EEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--cC--cccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC--QG--IIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~--~g--IiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+||||||.+|+|...+++ ...+.+++..+|.++.|++.||..||+ .. |+||||||.||+++.+|.|||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999984 345679999999999999999999999 45 999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
+.+..+ .....+++|||.||+||.+.+.+|+.+|||||+||++|||+.-++||
T Consensus 176 r~l~s~---------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF 228 (375)
T KOG0591|consen 176 RFLSSK---------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF 228 (375)
T ss_pred hHhcch---------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence 775422 12345789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 899 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+.+..+...+|.+++++.-....+|.++..||..|+..||+.||+..+.+.+
T Consensus 229 ~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 229 YGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred ccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 99999898899998876522234578899999999999999999984333333
No 14
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-46 Score=385.28 Aligned_cols=290 Identities=41% Similarity=0.772 Sum_probs=259.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+.+++|..++.||+|.||.|-+|+.+.+++.||||++++..+..+..+..-..|-.+|...+||++..+...|+..+.+
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 45678999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.||.|+-.+.+. ..+++...++|-..|+.||.|||+++||+||||.+|+|++.+|++||.|||+++..-
T Consensus 244 CFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred EEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc--
Confidence 9999999999999888764 569999999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.-.....++||||.|+|||++....|+.++|.|.+|+++|||+||++||...+..
T Consensus 320 -------------------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~ 374 (516)
T KOG0690|consen 320 -------------------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE 374 (516)
T ss_pred -------------------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence 0112356799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhh--hccCCCCCCCCCCCC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELDAPLFAT 981 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~~p~~~~ 981 (1002)
..+..|+-..+.+|.. ++++++.||..+|.+||.+|+... +.|.++.+|+||.+++|.+. ..+.|| .-|..-.
T Consensus 375 kLFeLIl~ed~kFPr~--ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PP--fKPqVtS 450 (516)
T KOG0690|consen 375 KLFELILMEDLKFPRT--LSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPP--FKPQVTS 450 (516)
T ss_pred HHHHHHHhhhccCCcc--CCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCC--CCCCccc
Confidence 9999999999999875 689999999999999999999864 56999999999999999988 334444 4455443
Q ss_pred cccccc
Q 001869 982 DTEKEY 987 (1002)
Q Consensus 982 ~~~~~~ 987 (1002)
.++-.|
T Consensus 451 etDTry 456 (516)
T KOG0690|consen 451 ETDTRY 456 (516)
T ss_pred ccchhh
Confidence 343334
No 15
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.9e-46 Score=409.27 Aligned_cols=256 Identities=33% Similarity=0.540 Sum_probs=235.5
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|.+...||+|+||.||+++.+.+.+.||||++.+.. ......+.+.+|++|++.++||||+.++++|++..++|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g-r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG-RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC-CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 57999999999999999999999999999999998753 34456788999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.| +|+.++... +.++++.++.++.+++.||.|||+++|+|||+||.|||+..+|++|+||||+|+.++..
T Consensus 81 e~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~---- 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN---- 153 (808)
T ss_pred hhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC----
Confidence 99966 999999875 55999999999999999999999999999999999999999999999999999876532
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....++-|||.|||||.+.+.+|+..+|+||||||+||++.|++||......+..+
T Consensus 154 -----------------------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~ 210 (808)
T KOG0597|consen 154 -----------------------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVK 210 (808)
T ss_pred -----------------------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 123346789999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.|...+.++|. ..+..+++||+.+|.+||.+|+| +.+++.|||.++.
T Consensus 211 ~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~Rlt----W~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 211 SILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLT----WTDLLGHPFWKGK 257 (808)
T ss_pred HHhcCCCCCcc--cccHHHHHHHHHHhhcChhhccc----HHHHhcChHHhhh
Confidence 99999888887 47889999999999999999999 9999999999873
No 16
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-47 Score=379.07 Aligned_cols=261 Identities=30% Similarity=0.487 Sum_probs=233.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..+.|.+...||+|.|+.||+|.+..+|+.+|+|++....+... ....+.+|+.|.+.|+|||||++++.+...+..|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence 345789999999999999999999999999999999876655443 5678889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC---CcEEEEeccCCcccC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~~~ 822 (1002)
+|+|+|.|++|..-+-.+ ..+++..+-.+++||+++|.|+|.+||||||+||.|+|+.+. .-+||+|||+|....
T Consensus 87 lvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999999998666443 458999999999999999999999999999999999999643 459999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. .......+|||+|||||++...+|+..+|||+.|++||-|+.|++||.+.+
T Consensus 165 ~----------------------------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 165 D----------------------------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 216 (355)
T ss_pred C----------------------------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence 1 122346789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 903 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
....++.|..+.+.++ .+..+++++++|+++||..||.+|+| +.|+|+|||+...
T Consensus 217 ~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt----a~EAL~HpWi~~r 273 (355)
T KOG0033|consen 217 QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT----ADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc----HHHHhCCchhcch
Confidence 9999999999877665 57889999999999999999999999 9999999999873
No 17
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-45 Score=412.72 Aligned_cols=262 Identities=34% Similarity=0.614 Sum_probs=234.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh--hHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR--NKVHRACAEREILDMLD-HPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~--~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~ 742 (1002)
...+.|++.+.||+|+||.|++|.+..++..||+|++.+...... .....+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 446799999999999999999999999999999998776532211 23456668999999998 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-CcEEEEeccCCccc
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~ 821 (1002)
.+|+|||||.||+|++++.. .+.+.+..++.+++||+.||+|||++||+||||||+|||++.+ +++||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 99999999999999999987 3569999999999999999999999999999999999999999 99999999999764
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CC-ChhhHHHHHHHHHHHHcCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-SAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~-~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
. .......+.|||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||.
T Consensus 172 ~---------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 P---------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred C---------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 2 0112345689999999999999877 75 69999999999999999999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+....+.+|..+.+.+|.... |.++++|+.+||..||.+|+| +.++++||||+..
T Consensus 225 d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t----~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 225 DSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRIT----LLEILEHPWFQKE 281 (370)
T ss_pred CccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCC----HHHHhhChhhccC
Confidence 99999999999999999998755 999999999999999999999 9999999999973
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-46 Score=402.67 Aligned_cols=263 Identities=28% Similarity=0.469 Sum_probs=227.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC-e
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT-H 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~-~ 743 (1002)
+..++|.++++||.|+||.||+|....++..||||.+++... ..+.+ .-++|+.-|++|+ ||||+++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 346799999999999999999999999999999999987643 23332 2357999999998 999999999999888 9
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||| ..+|+++++.+ +..|++..++.|+.||++||+|+|++|+.||||||+|||+..+..+||+|||+|+....
T Consensus 85 L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999999 88999999987 78899999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.+ ....++.|.+|+|||+|.. ..|+.+.|||++|||++|+++-++.|.|.+
T Consensus 163 kp----------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 163 KP----------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred CC----------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 21 2234688999999999855 568889999999999999999999999999
Q ss_pred hHHHHHHHHh--C-----------------CCCCCCC---------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 903 RQKTFANILH--K-----------------DLKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 903 ~~~~~~~i~~--~-----------------~~~~~~~---------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..+++.+|.. + .+.+|.. +..+.++.+||.+||.+||.+||| |.++|+
T Consensus 215 E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpT----A~~al~ 290 (538)
T KOG0661|consen 215 EIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPT----ASQALQ 290 (538)
T ss_pred HHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCcc----HHHHhc
Confidence 9888887754 1 2233322 346788999999999999999999 999999
Q ss_pred CCCcCCCChh
Q 001869 955 HPFFKGVNWA 964 (1002)
Q Consensus 955 Hp~f~~~~~~ 964 (1002)
||||+.....
T Consensus 291 ~pffq~~~~~ 300 (538)
T KOG0661|consen 291 HPFFQVGRAS 300 (538)
T ss_pred Cccccccccc
Confidence 9999975444
No 19
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-45 Score=395.04 Aligned_cols=267 Identities=34% Similarity=0.563 Sum_probs=228.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc-----------ChhHHHHHHHHHHHHHhCCCCCcce
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------NRNKVHRACAEREILDMLDHPFVPA 733 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~~~~E~~il~~l~hpnIv~ 733 (1002)
...+++|++++.||+|.||.|-+|++..+++.||||++.+.... ......+..+||.||++|.|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 34567999999999999999999999999999999999864321 1122457889999999999999999
Q ss_pred EEEEEEe--CCeEEEEEecCCCCcHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcE
Q 001869 734 LYASFQT--KTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 810 (1002)
Q Consensus 734 l~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~-l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~v 810 (1002)
|+++..+ .+.+|||+|||..|.+...-. .+. +++.+++.|+++++.||+|||.+|||||||||+|+|++++|+|
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcE
Confidence 9999975 578999999999888865432 234 9999999999999999999999999999999999999999999
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC----CCChhhHHHHHH
Q 001869 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGI 886 (1002)
Q Consensus 811 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~~sDIwSlGv 886 (1002)
||+|||.+........ ..........+|||.|||||...+.. .+.+.||||+||
T Consensus 250 KIsDFGVs~~~~~~~~----------------------~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGV 307 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSD----------------------EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGV 307 (576)
T ss_pred EeeccceeeecccCCc----------------------cccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhh
Confidence 9999999865421100 00001112368999999999987632 345899999999
Q ss_pred HHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 887 LLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 887 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+||.|++|++||.+....+.+.+|+...+.+|..+.+...+++||.+||++||++|++ +.++..|||...
T Consensus 308 TLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~----l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 308 TLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRIT----LPDIKLHPWVTR 377 (576)
T ss_pred hHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheee----hhhheecceecc
Confidence 9999999999999999999999999999999999888999999999999999999999 999999999886
No 20
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=435.00 Aligned_cols=292 Identities=37% Similarity=0.670 Sum_probs=262.8
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|.+++.||+|+||.|.+++++.+++.||+|++.+-.+..+.....|..|..||.--+++-|+.++..|+++.++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 35568999999999999999999999999999999999987777777788899999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|..++.+.. .+|+..+++|+..|+.||.-||+.|+|||||||+|||++.+|++||+|||.+-.+..+
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999998753 7999999999999999999999999999999999999999999999999988655422
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
+...+..-+|||.|+|||+|.. +.|+..+|+||+||++|||++|..||+
T Consensus 229 --------------------------G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 229 --------------------------GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred --------------------------CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 2334567799999999999942 568889999999999999999999999
Q ss_pred CCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 900 GKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
..+..+.|.+|+.- .+.||....+|.++++||+++|+ +|+.|++ ..+++++.+||||.+++|..+|...|| .+|
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg-rngiedik~HpFF~g~~W~~iR~~~pP--~vP 358 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLG-RNGIEDIKNHPFFEGIDWDNIRESVPP--VVP 358 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc-cccHHHHHhCccccCCChhhhhhcCCC--CCC
Confidence 99999999999965 78889777899999999999998 8889988 567999999999999999999999999 778
Q ss_pred CCCCccccccc
Q 001869 978 LFATDTEKEYK 988 (1002)
Q Consensus 978 ~~~~~~~~~~~ 988 (1002)
.++-|.+-.-+
T Consensus 359 evssd~DTsnF 369 (1317)
T KOG0612|consen 359 EVSSDDDTSNF 369 (1317)
T ss_pred cCCCCCccccc
Confidence 88766554433
No 21
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.6e-44 Score=399.69 Aligned_cols=283 Identities=39% Similarity=0.689 Sum_probs=245.1
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 37999999999999999999999999999999997654434445567888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 208 (291)
T cd05612 154 -------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE 208 (291)
T ss_pred -------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 1123569999999999999989999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCcccc
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEK 985 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~ 985 (1002)
.+......++.. .+..+++||++||+.||.+|++.. ..++++++||||+.++|..+..........|-++.+.+.
T Consensus 209 ~i~~~~~~~~~~--~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 284 (291)
T cd05612 209 KILAGKLEFPRH--LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDGDT 284 (291)
T ss_pred HHHhCCcCCCcc--CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCcccc
Confidence 888887766654 588899999999999999999532 349999999999999999886555444466766655443
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-44 Score=396.36 Aligned_cols=291 Identities=26% Similarity=0.375 Sum_probs=237.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--Ce
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--TH 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~ 743 (1002)
...+.|+.+.+||+|+||.||+|++..+|+.||+|.++... .+.....-..+||.||++|+||||++|.+...+. ..
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~-~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN-EKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc-CCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 34578999999999999999999999999999999998763 2455566778899999999999999999998876 78
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||| .-+|..++.. +.-.|++.+++.|+.||+.||+|||.+||+|||||.+||||+.+|.+||+|||+|+.+..
T Consensus 193 iYlVFeYM-dhDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 193 IYLVFEYM-DHDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEEEecc-cchhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99999999 5678887754 345699999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
... ....+.+-|.+|+|||.|.|. .|+.++|+||.||||.||+.|++.|.|.+
T Consensus 271 ~~~--------------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t 324 (560)
T KOG0600|consen 271 SGS--------------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT 324 (560)
T ss_pred CCC--------------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc
Confidence 321 123456889999999999885 68899999999999999999999999999
Q ss_pred hHHHHHHHHhC--C--------CCCCC-----------------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 903 RQKTFANILHK--D--------LKFPS-----------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 903 ~~~~~~~i~~~--~--------~~~~~-----------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
..+++..|.+- . ..+|. ....+..+.+|+.+||+.||.+|.| |.++|+|
T Consensus 325 EveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t----A~~aL~s 400 (560)
T KOG0600|consen 325 EVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGT----ASSALQS 400 (560)
T ss_pred HHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccccc----HHHHhcC
Confidence 99999888652 0 11111 1234567789999999999999999 9999999
Q ss_pred CCcCCCChhhhhccCCCCCCCCCCCCccccccccCChhhH
Q 001869 956 PFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQ 995 (1002)
Q Consensus 956 p~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 995 (1002)
+||+.-... .+...+|.....-+.+.+..++.++
T Consensus 401 eyF~t~p~~------~~p~~Lp~y~~s~E~~~K~r~e~~r 434 (560)
T KOG0600|consen 401 EYFTTEPLP------CDPSSLPKYPPSHELDAKRRREQKR 434 (560)
T ss_pred cccccCCCC------CCcccCCCCCcchhHHHHHHHHHhh
Confidence 999542222 2223456655555555555555443
No 23
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.8e-44 Score=405.45 Aligned_cols=269 Identities=40% Similarity=0.762 Sum_probs=238.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY 94 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence 34579999999999999999999999999999999998754444455677889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 95 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~-- 170 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD-- 170 (329)
T ss_pred EEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC--
Confidence 999999999999999764 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 171 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 222 (329)
T PTZ00263 171 ----------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR 222 (329)
T ss_pred ----------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH
Confidence 1123579999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhc
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
.+..+..+.+.+|.. ++..+++||.+||+.||.+|+++. +.++++++||||++.+|..+..
T Consensus 223 ~~~~i~~~~~~~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~ 284 (329)
T PTZ00263 223 IYEKILAGRLKFPNW--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYA 284 (329)
T ss_pred HHHHHhcCCcCCCCC--CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHh
Confidence 888888877666643 688899999999999999999742 4589999999999999998743
No 24
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-45 Score=367.20 Aligned_cols=260 Identities=35% Similarity=0.595 Sum_probs=242.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
..+++|++.+.||.|-||.||+|+.++++..+|+|++.+..+......+++.+|++|...|+||||+++|++|-+...+|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 45679999999999999999999999999999999999887777777788999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+++||..+|+|+..|+.+....+++.....|+.|++.||.|+|.++||||||||+|+|++..|.+||+|||.+..
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~----- 173 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH----- 173 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee-----
Confidence 999999999999999976677899999999999999999999999999999999999999999999999999843
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.++....+.|||..|.+||...+..++..+|+|++|++.||++.|.+||...+..+
T Consensus 174 ------------------------~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e 229 (281)
T KOG0580|consen 174 ------------------------APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE 229 (281)
T ss_pred ------------------------cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence 23455668899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+++|.+-++.+| ..++.++.+||.+||.++|.+|+. +.+++.|||+..
T Consensus 230 tYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~----l~~v~~hpwI~a 278 (281)
T KOG0580|consen 230 TYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLA----LTEVMDHPWIVA 278 (281)
T ss_pred HHHHHHHccccCC--cccChhHHHHHHHHhccCcccccc----HHHHhhhHHHHh
Confidence 9999999998888 457899999999999999999999 999999999875
No 25
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.5e-44 Score=405.52 Aligned_cols=288 Identities=35% Similarity=0.670 Sum_probs=245.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCC-eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++.+.||+|+||.||+|.+..++ ..||+|.+.+...........+.+|+.+++.++||||+++++++.+.+.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 355679999999999999999999976654 7899999976544445556678899999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+.+|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999765 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 233 (340)
T PTZ00426 184 ------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP 233 (340)
T ss_pred ------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH
Confidence 01235799999999999998899999999999999999999999999988
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCc
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 982 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 982 (1002)
...+..+......+|. ..+..+++||++||+.||.+|++.. +.++++++||||++++|..+.....+....|.+...
T Consensus 234 ~~~~~~i~~~~~~~p~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 311 (340)
T PTZ00426 234 LLIYQKILEGIIYFPK--FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNV 311 (340)
T ss_pred HHHHHHHhcCCCCCCC--CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCC
Confidence 8888888887766654 3678899999999999999997321 339999999999999999875444444466776655
Q ss_pred cccc
Q 001869 983 TEKE 986 (1002)
Q Consensus 983 ~~~~ 986 (1002)
....
T Consensus 312 ~~~~ 315 (340)
T PTZ00426 312 FDSS 315 (340)
T ss_pred cchh
Confidence 4433
No 26
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.5e-44 Score=363.60 Aligned_cols=260 Identities=26% Similarity=0.462 Sum_probs=224.5
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|..++.||+|.||+||+|++..+|+.||||.++.....+.- .....+|+..|+.++|+||+.++++|...+.+.+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi-~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI-NRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc-cHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 4799999999999999999999999999999999876433222 245678999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||| ..+|...++.. ...++..+++.|+.++++||+|||.+.|+||||||+|+|++++|.+||+|||+|+.+...+.
T Consensus 81 Efm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-- 156 (318)
T KOG0659|consen 81 EFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-- 156 (318)
T ss_pred Eec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc--
Confidence 999 77999998764 56799999999999999999999999999999999999999999999999999987653322
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.....+-|.+|+|||.+.|. .|+..+||||.|||+.||+-|.+.|.|.++.+++
T Consensus 157 -------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL 211 (318)
T KOG0659|consen 157 -------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL 211 (318)
T ss_pred -------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence 22233789999999999885 5788999999999999999999999999999999
Q ss_pred HHHHhC--C---CCCCC---------------------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 908 ANILHK--D---LKFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 908 ~~i~~~--~---~~~~~---------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..|.+- . -.||. .+..+.++.+|+.+||.+||.+|+| +.|+|+|+||+..
T Consensus 212 ~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit----a~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 212 SKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT----ASQALKHPYFKSL 287 (318)
T ss_pred HHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc----HHHHhcchhhhcC
Confidence 888752 1 11111 1335667899999999999999999 9999999999974
Q ss_pred C
Q 001869 962 N 962 (1002)
Q Consensus 962 ~ 962 (1002)
.
T Consensus 288 P 288 (318)
T KOG0659|consen 288 P 288 (318)
T ss_pred C
Confidence 3
No 27
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.6e-44 Score=401.58 Aligned_cols=263 Identities=43% Similarity=0.774 Sum_probs=230.1
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||+|.+..+|+.||||++++...........+..|+.+++.++||||+++++++...+.+|+||||+.++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765445556677888999999999999999999999999999999999999
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----------
Confidence 999999764 46899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001869 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05571 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211 (323)
T ss_pred -----------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC
Confidence 011234579999999999999999999999999999999999999999988888888787777
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhc
Q 001869 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
..+|. .++.++.+||.+||+.||.+||+... .+.++++||||++++|..+..
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~ 264 (323)
T cd05571 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQ 264 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 66654 46889999999999999999993221 299999999999999998853
No 28
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-44 Score=383.64 Aligned_cols=273 Identities=26% Similarity=0.401 Sum_probs=237.9
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.++.++.+.|++...||.|..++||+|+...++.+||||++..+.. ......+.+|+..|+.++||||+.++..|..+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc--~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC--NNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh--hhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 3456778999999999999999999999999999999999986543 33478899999999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|+||.||.+|++.++++..-...+++..+..+++++++||.|||++|.||||||+.||||+++|.|||+|||.+..+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999998765556999999999999999999999999999999999999999999999999998655
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCccc-ccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS-NSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.... ...... .+++|||+|||||++.. ..|+.|+||||||++..||.+|..||
T Consensus 177 ~~~G------------------------~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf 232 (516)
T KOG0582|consen 177 FDSG------------------------DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPF 232 (516)
T ss_pred cccC------------------------ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCc
Confidence 3211 011122 67899999999999754 56888999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCC--------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 899 RGKTRQKTFANILHKDLKFPSS--------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~--------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
....+.+++..-+++..+.+.. ...+..++.++..||.+||.+||| +.++|+|+||+..+-.
T Consensus 233 ~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRpt----AskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 233 SKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPT----ASKLLKHAFFKKAKSK 302 (516)
T ss_pred ccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCC----HHHHhccHHHhhccch
Confidence 9999998888888877664432 334567889999999999999999 9999999999986544
No 29
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=401.72 Aligned_cols=266 Identities=27% Similarity=0.461 Sum_probs=235.4
Q ss_pred HHhhhccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEE
Q 001869 656 IQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALY 735 (1002)
Q Consensus 656 ~~~~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~ 735 (1002)
++.+...+... ..|.....||+|+.|.||.+....+++.||||.+.... .....-+.+|+.+|+..+|+|||.++
T Consensus 262 l~~v~~~~dP~--~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---Q~~keLilnEi~Vm~~~~H~NiVnfl 336 (550)
T KOG0578|consen 262 LKRVVSQGDPR--SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK---QPKKELLLNEILVMRDLHHPNIVNFL 336 (550)
T ss_pred hheeccCCChh--hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc---CCchhhhHHHHHHHHhccchHHHHHH
Confidence 34444555543 48999999999999999999999999999999998653 23345678999999999999999999
Q ss_pred EEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEec
Q 001869 736 ASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
+.|...+.+|+|||||+||+|.|.+.. ..+++.++..++++++.||+|||.+||||||||.+|||++.+|.+||+||
T Consensus 337 ~Sylv~deLWVVMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 337 DSYLVGDELWVVMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred HHhcccceeEEEEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeee
Confidence 999999999999999999999999976 34999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
|++..+... .....+.+|||+|||||++....|++++||||||++++||+-|+
T Consensus 414 GFcaqi~~~---------------------------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGE 466 (550)
T KOG0578|consen 414 GFCAQISEE---------------------------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGE 466 (550)
T ss_pred eeeeccccc---------------------------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCC
Confidence 998654321 12456789999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 896 TPFRGKTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+||...++...+..|.. +...+.....+|+.+++||.+||+.|+.+|++ |.+||+||||+-
T Consensus 467 PPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ras----A~eLL~HpFl~~ 528 (550)
T KOG0578|consen 467 PPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRAS----AKELLEHPFLKM 528 (550)
T ss_pred CCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCC----HHHHhcChhhhh
Confidence 99998888777777764 56667777789999999999999999999999 999999999964
No 30
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.7e-43 Score=402.94 Aligned_cols=295 Identities=36% Similarity=0.643 Sum_probs=236.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+..|+.++..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998754444555667888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999764 459999999999999999999999999999999999999999999999999986543211110
Q ss_pred CCcchhh--hhc-ccCCCC-----CccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 829 LPTTNEK--KRR-HKGQQN-----PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 829 ~~~~~~~--~~~-~~~~~~-----~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
....... ... ...... ..............+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0000000 000 000000 00000001112356899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCC---CCChhcHHHHHcCCCcCCCChhhhhccC
Q 001869 901 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSR---LGSHEGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 901 ~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~R---pt~~~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
.+..+.+.++... .+.+|....++.++++||.+|+. +|.+| |+ +++|++||||++++|..++...
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~----~~ei~~hp~f~~~~~~~~~~~~ 308 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG----VEEIKTNPFFEGVDWEHIRERP 308 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC----HHHHhCCCCCCCCCHHHHHhCC
Confidence 8888888888763 45566666688999999999875 55555 66 9999999999999999986544
No 31
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.6e-43 Score=408.14 Aligned_cols=317 Identities=36% Similarity=0.669 Sum_probs=246.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++||||++++++|.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 37999999999999999999999999999999987654444455677888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999986432111000
Q ss_pred C-----Ccchhhhh---cccCCCCCc------------cccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHH
Q 001869 829 L-----PTTNEKKR---RHKGQQNPV------------FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 829 ~-----~~~~~~~~---~~~~~~~~~------------~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
. ........ ......... +...........+||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0 00000000 000000000 000000011236799999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 889 YEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 889 ~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
|+|++|.+||.+.+..+.+..+.. ..+.+|....++.++++||.+||. +|.+|+.. ..+.++++||||++++|+.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r-~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGR-GGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHH
Confidence 999999999999888887777765 345566666688999999999998 78776521 12999999999999999999
Q ss_pred hccCCCCCCCCCCCCccccccccCC
Q 001869 967 RCMNPPELDAPLFATDTEKEYKVVD 991 (1002)
Q Consensus 967 ~~~~~~~~~~p~~~~~~~~~~~~~~ 991 (1002)
+...+| .+|.+.......|...+
T Consensus 317 ~~~~~~--~~~~~~~~~~~~~~~~~ 339 (377)
T cd05629 317 RQIRAP--FIPQLKSITDTSYFPTD 339 (377)
T ss_pred ccCCCC--cccCCCCccccccCCcc
Confidence 877777 55666555554444433
No 32
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3e-43 Score=404.04 Aligned_cols=308 Identities=38% Similarity=0.678 Sum_probs=244.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||.|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++||||++++++|.+++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998754444555667888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..........
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999999764 459999999999999999999999999999999999999999999999999986543211100
Q ss_pred CCcchhh-hhc----------ccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 829 LPTTNEK-KRR----------HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 829 ~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
....... ... ........+...........+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 0000000 000 00000000000000012245799999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCC
Q 001869 898 FRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 975 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~ 975 (1002)
|.+.+..+.+..+.... +.++....++.++++||.+||. +|.+|++. ..++++++||||++++|..++...+| .
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~--~ 314 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN-NGVNEIKSHPFFKGVDWEHIRERPAP--I 314 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCC--C
Confidence 99988888877776543 4455555678999999999997 99999974 45999999999999999988766555 3
Q ss_pred CCCCCCc
Q 001869 976 APLFATD 982 (1002)
Q Consensus 976 ~p~~~~~ 982 (1002)
+|.+...
T Consensus 315 ~~~~~~~ 321 (364)
T cd05599 315 IPELKSI 321 (364)
T ss_pred CCCCCCc
Confidence 4555443
No 33
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.9e-45 Score=366.92 Aligned_cols=270 Identities=31% Similarity=0.531 Sum_probs=233.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc-----ChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (1002)
...|.-.+.||.|..++|-+|.++.+|+.+|+|++...... .......-.+|+.||+++ +||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 35788889999999999999999999999999998753221 122234455799999998 799999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+++|+|.|+.|.|+|++... -.+++...+.+++||++|++|||.++||||||||+|||++++-++||+|||+|+.+
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999999999764 45999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC------CCCCChhhHHHHHHHHHHHHcCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~~~~sDIwSlGvil~elltG~ 895 (1002)
... ......||||+|+|||.+.. ..|+..+|+|++|+|+|-|+.|+
T Consensus 174 ~~G----------------------------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 174 EPG----------------------------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred CCc----------------------------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 422 22235799999999999843 46778999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCC--CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCC
Q 001869 896 TPFRGKTRQKTFANILHKDLKF--PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNP 971 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~ 971 (1002)
+||+.....-++..|+.+++.+ |.+..+|...++||.+||+.||.+|+| ++++|.||||..+-....+.+.|
T Consensus 226 pPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rit----ake~LaHpff~q~~~~~~r~msP 299 (411)
T KOG0599|consen 226 PPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRIT----AKEALAHPFFIQIAQQQARQMSP 299 (411)
T ss_pred CchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhccc----HHHHhcChHHHHHHHhcccccCC
Confidence 9999999999999999998776 456778999999999999999999999 99999999998754444444433
No 34
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.9e-43 Score=397.95 Aligned_cols=279 Identities=37% Similarity=0.639 Sum_probs=240.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+..|+.++..++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765444455677889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~ 208 (333)
T cd05600 154 -------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE 208 (333)
T ss_pred -------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH
Confidence 1234579999999999999999999999999999999999999999988877777
Q ss_pred HHHhCC--CCCCCC----CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCc
Q 001869 909 NILHKD--LKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 982 (1002)
Q Consensus 909 ~i~~~~--~~~~~~----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 982 (1002)
.+.... +..+.. ..++.++.+||.+||..+|.+||+ +.++++||||+.++|..+....+| .+|.+..+
T Consensus 209 ~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s----~~~ll~h~~~~~~~~~~~~~~~~~--~~~~~~~~ 282 (333)
T cd05600 209 NLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS----LEDIKNHPFFKEVDWNELRELKPP--FVPELESE 282 (333)
T ss_pred HHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC----HHHHHhCcccCCCCHHHHhhCCCC--CCCCCCCc
Confidence 665432 222222 245889999999999999999999 999999999999999998866666 45666554
Q ss_pred ccc
Q 001869 983 TEK 985 (1002)
Q Consensus 983 ~~~ 985 (1002)
...
T Consensus 283 ~~~ 285 (333)
T cd05600 283 IDT 285 (333)
T ss_pred chh
Confidence 433
No 35
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-44 Score=387.27 Aligned_cols=261 Identities=32% Similarity=0.479 Sum_probs=218.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--eEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCL 746 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 746 (1002)
..|...+.||+|+||.||++.+..+|..+|||.+... +......+.+|+.+|++++|||||++++...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~---~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE---DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecc---cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 4688899999999999999999999999999998765 2222677899999999999999999999755444 6899
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEEeccCCcccCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|||+++|+|.+++.+.++ .+++..++.+.+||++||+|||++|||||||||+|||++. +|.+||+|||++......
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~- 171 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK- 171 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc-
Confidence 9999999999999998765 7999999999999999999999999999999999999999 799999999998654320
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCC-CCh
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG-KTR 903 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~-~~~ 903 (1002)
.........+.||+.|||||++... ....++|||||||++.||+||+.||.. ...
T Consensus 172 -----------------------~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~ 228 (313)
T KOG0198|consen 172 -----------------------GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE 228 (313)
T ss_pred -----------------------cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch
Confidence 0011223457899999999999853 334599999999999999999999987 444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
...+-.+........-+..+|.++++||.+||.+||++||| |.++|+|||.+.-
T Consensus 229 ~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpt----a~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 229 AEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPT----AEELLEHPFLKQN 282 (313)
T ss_pred HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcC----HHHHhhChhhhcc
Confidence 44455555444111233447899999999999999999999 9999999999874
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.2e-43 Score=388.75 Aligned_cols=278 Identities=33% Similarity=0.559 Sum_probs=231.3
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++++.+.+..|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 47889999999999999999999999999999876544333444567789999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 999999998886544456899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05631 156 -----------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE 212 (285)
T ss_pred -----------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence 011234689999999999999999999999999999999999999987654322222
Q ss_pred ----HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 910 ----ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 910 ----i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+...... .....+.++.+||++||+.||.+||+..+ .++++++||||.+++|..+.....+....|
T Consensus 213 ~~~~~~~~~~~--~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05631 213 VDRRVKEDQEE--YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP 283 (285)
T ss_pred HHHHhhccccc--CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCC
Confidence 2222222 23347889999999999999999997542 489999999999999999977755544555
No 37
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.1e-43 Score=393.98 Aligned_cols=264 Identities=44% Similarity=0.793 Sum_probs=229.5
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765555556678889999999999999999999999999999999999999
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------
Confidence 999998764 45899999999999999999999999999999999999999999999999998532110
Q ss_pred hhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001869 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~ 211 (328)
T cd05593 149 -----------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211 (328)
T ss_pred -----------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC
Confidence 011224579999999999999899999999999999999999999999888877777777766
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhcc
Q 001869 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
..+|. .++.++.+||.+||..||.+|++.. +.+.++++||||.+++|..+...
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~ 265 (328)
T cd05593 212 IKFPR--TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDK 265 (328)
T ss_pred ccCCC--CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 66654 4688999999999999999998321 23999999999999999977443
No 38
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.2e-43 Score=400.30 Aligned_cols=287 Identities=34% Similarity=0.602 Sum_probs=240.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.+++.++||||+++++++.+++.+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 34567999999999999999999999999999999999765444444556678899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999998653 4889999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC----CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred C--------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence 0 0112345799999999998654 367899999999999999999999999
Q ss_pred CChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCC
Q 001869 901 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDA 976 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~ 976 (1002)
.+....+..+.... +.+|....++.++++||.+||+.+|.+ |++ +.++++||||+..+|............+
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s----~~ell~h~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T cd05596 250 DSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNG----VDEIKSHPFFKNDQWTFDNIRETVAPVV 325 (370)
T ss_pred CCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCC----HHHHhcCcccCCCChhhHHhcCCCcCcc
Confidence 98888888887643 556666678999999999999999987 999 9999999999998887553333333345
Q ss_pred CCCCCccc
Q 001869 977 PLFATDTE 984 (1002)
Q Consensus 977 p~~~~~~~ 984 (1002)
|.++.+.+
T Consensus 326 p~~~~~~~ 333 (370)
T cd05596 326 PELSSDID 333 (370)
T ss_pred CcCCCcch
Confidence 66555443
No 39
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.4e-42 Score=398.80 Aligned_cols=305 Identities=35% Similarity=0.567 Sum_probs=237.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999999999999999999987655555666788999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99999999999764 4589999999999999999999999999999999999999999999999999854321110000
Q ss_pred CcchhhhhcccCC--------------------CCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHH
Q 001869 830 PTTNEKKRRHKGQ--------------------QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 830 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
............. ..............+.+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 0000000000000 00000000011123568999999999999988999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHccc--cCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001869 890 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLH--RDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 890 elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~~~~Ll~~~L~--~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
+|++|..||...+.......+.. ....++....+++++++||.+||. .+|..|++ +.++++||||++++|..
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~----~~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNG----ADDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCcccCCCChhH
Confidence 99999999998887776666664 345566666689999999999654 45555999 99999999999999987
Q ss_pred hhccCCCCCCCCCCCC
Q 001869 966 VRCMNPPELDAPLFAT 981 (1002)
Q Consensus 966 ~~~~~~~~~~~p~~~~ 981 (1002)
.....++ ...|.++.
T Consensus 316 ~~~~~~~-~~~p~~~~ 330 (381)
T cd05626 316 DIRTQPA-PYVPKISH 330 (381)
T ss_pred HhhcCCC-CccCcCCC
Confidence 5433332 23454443
No 40
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.2e-43 Score=366.35 Aligned_cols=262 Identities=23% Similarity=0.351 Sum_probs=222.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~ 745 (1002)
.+.|+.+..|++|+||.||+|+++.|+..||+|.++-.. ......-...+||.+|.+.+|||||.+.++... -+.+|
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 568999999999999999999999999999999998653 222233455789999999999999999998864 46799
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||| .-+|..++.... ..+...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.++..
T Consensus 154 ~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp- 230 (419)
T KOG0663|consen 154 IVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP- 230 (419)
T ss_pred eeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-
Confidence 999999 668998887654 57999999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......+-|.+|+|||.|.+. .|+.++|+||+|||+.||+++++.|.|....
T Consensus 231 --------------------------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~ 284 (419)
T KOG0663|consen 231 --------------------------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI 284 (419)
T ss_pred --------------------------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH
Confidence 1223456889999999999885 5888999999999999999999999999999
Q ss_pred HHHHHHHhC-------------------CCCCCCC-----------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 905 KTFANILHK-------------------DLKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 905 ~~~~~i~~~-------------------~~~~~~~-----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+++.+|.+. .+.++.. ..++....+|+.++|.+||.+|+| |.+.|+
T Consensus 285 dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t----A~~~L~ 360 (419)
T KOG0663|consen 285 DQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT----AEDGLK 360 (419)
T ss_pred HHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc----HHHhhc
Confidence 988888652 0111110 114577889999999999999999 999999
Q ss_pred CCCcCCCCh
Q 001869 955 HPFFKGVNW 963 (1002)
Q Consensus 955 Hp~f~~~~~ 963 (1002)
|+||.....
T Consensus 361 h~~F~e~P~ 369 (419)
T KOG0663|consen 361 HEYFRETPL 369 (419)
T ss_pred ccccccCCC
Confidence 999998433
No 41
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.9e-42 Score=390.57 Aligned_cols=263 Identities=41% Similarity=0.777 Sum_probs=228.9
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||++.+..+|+.||+|++.+...........+.+|+.+++.++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765445555667788999999999999999999999999999999999999
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---------- 148 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----------
Confidence 999988764 45899999999999999999999999999999999999999999999999987532110
Q ss_pred hhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001869 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (1002)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05595 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211 (323)
T ss_pred -----------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 011123579999999999999999999999999999999999999999988888888887776
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhc
Q 001869 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
..+|. .++.++.+||.+||+.||.+|++.. ..+.++++||||.+++|.....
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 264 (323)
T cd05595 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ 264 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 66654 4688999999999999999998322 1399999999999999997743
No 42
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.7e-42 Score=389.03 Aligned_cols=261 Identities=42% Similarity=0.745 Sum_probs=228.9
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcH
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|+||.||+|.+..+++.||+|++.+...........+..|+.+++.++||||+++++++...+.+|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999999865444555667788899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001869 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------------ 146 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------------ 146 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC------------
Confidence 9999764 45899999999999999999999999999999999999999999999999998542110
Q ss_pred hcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001869 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+......
T Consensus 147 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 211 (312)
T cd05585 147 ---------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR 211 (312)
T ss_pred ---------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC
Confidence 01123457999999999999999999999999999999999999999998888888888887766
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhcc
Q 001869 917 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 917 ~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
++. .++..+.+||.+||..||.+||++. .+.++++||||+..+|..+...
T Consensus 212 ~~~--~~~~~~~~li~~~L~~dp~~R~~~~-~~~e~l~hp~~~~~~~~~~~~~ 261 (312)
T cd05585 212 FPD--GFDRDAKDLLIGLLSRDPTRRLGYN-GAQEIKNHPFFSQLSWKKLLMK 261 (312)
T ss_pred CCC--cCCHHHHHHHHHHcCCCHHHcCCCC-CHHHHHcCCCcCCCCHHHHHhC
Confidence 654 4688999999999999999998642 3899999999999999876433
No 43
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-43 Score=375.14 Aligned_cols=255 Identities=30% Similarity=0.553 Sum_probs=234.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..+|++.+.||+|.||.|-+|.+...|+.||||.+++..+.+..+.-.+.+|++||..|+||||+++|++|++.+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35899999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||..+|.|+||+... +.|++...+.+++||+.|+.|||+++++|||||.+|||++.|+++||+|||++..+..+.
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k-- 207 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK-- 207 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc--
Confidence 9999999999999875 569999999999999999999999999999999999999999999999999997654221
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
...++||+|.|.+||++.|.+|. +.+|.||||++||-|+.|..||.|.+....
T Consensus 208 --------------------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l 261 (668)
T KOG0611|consen 208 --------------------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL 261 (668)
T ss_pred --------------------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH
Confidence 23478999999999999998884 689999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+.+|.++.+.-|.. +.++..||+-||..||++|.| +.+|..|=|.+
T Consensus 262 vrQIs~GaYrEP~~---PSdA~gLIRwmLmVNP~RRAT----ieDiAsHWWvN 307 (668)
T KOG0611|consen 262 VRQISRGAYREPET---PSDASGLIRWMLMVNPERRAT----IEDIASHWWVN 307 (668)
T ss_pred HHHhhcccccCCCC---CchHHHHHHHHHhcCcccchh----HHHHhhhheee
Confidence 99999988766654 446788999999999999999 99999998864
No 44
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-44 Score=383.63 Aligned_cols=294 Identities=34% Similarity=0.576 Sum_probs=250.4
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.++..+.|+.-++||+|+||.||-|.-+.||+.||+|.+.+..+..+......++|..||.+++.++||.+-..|++.+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 34667889999999999999999999999999999999988776666666778899999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||..|+||+|.-.|-+.+...+++..+++|+.+|+.||++||+.+||+|||||+|||+|+.|+|+|+|+|+|..+..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999999888776667899999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC-
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT- 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~- 902 (1002)
.. .....+||.+|||||++.+..|++..|.|||||+||+|+.|+.||....
T Consensus 340 g~----------------------------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 340 GK----------------------------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred CC----------------------------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 11 1123489999999999999999999999999999999999999996532
Q ss_pred --hH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 903 --RQ-KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 903 --~~-~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.. ++-+.++.....++ ...|.++++|.+.+|++||.+|+.+. +.++++.+||||+.++|..+..-.-+....|.
T Consensus 392 Kvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPd 469 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPD 469 (591)
T ss_pred hhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCC
Confidence 22 44445555555565 45799999999999999999999998 78999999999999999998443333235666
Q ss_pred CCCcccccc
Q 001869 979 FATDTEKEY 987 (1002)
Q Consensus 979 ~~~~~~~~~ 987 (1002)
-.+--.+|.
T Consensus 470 p~aVyakDv 478 (591)
T KOG0986|consen 470 PGAVYAKDV 478 (591)
T ss_pred ccccchhhh
Confidence 444433333
No 45
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.8e-42 Score=399.24 Aligned_cols=292 Identities=38% Similarity=0.629 Sum_probs=232.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++||||+++++.+.+++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 37999999999999999999999999999999997654434445567888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..........
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999985432111000
Q ss_pred CCcchhhhhccc--------CCC--------CCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHH
Q 001869 829 LPTTNEKKRRHK--------GQQ--------NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 829 ~~~~~~~~~~~~--------~~~--------~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ell 892 (1002)
........+... ... ...............+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 000000000000 000 0000000011223568999999999999999999999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCC---CChhcHHHHHcCCCcCCCChhhhh
Q 001869 893 YGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRL---GSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 893 tG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rp---t~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
+|+.||.+.+..+....+... ....+....++..+.+||.+|+ .+|.+|+ + +.++++||||++++|..+.
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t----~~ell~h~~~~~~~~~~~~ 313 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNG----ADEIKAHPFFKGIDFASLI 313 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCC----HHHHhCCCCcCCCCHHHHh
Confidence 999999998877776666543 3344445567899999999987 5999999 6 9999999999999999884
No 46
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2e-42 Score=396.49 Aligned_cols=300 Identities=37% Similarity=0.679 Sum_probs=239.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+..|+.++..++||||+++++++.+.+.+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999999999999999998654444556677888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999986543211100
Q ss_pred CCc------chhhhhc--ccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 829 LPT------TNEKKRR--HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 829 ~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... ....... ....................+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 000 0000000 00000000000001112346899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCC
Q 001869 901 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 901 ~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
.+....+..+... .+.+|....++.++++||.+|+. ||.+|++. ..+.++++||||++++|..+.....+
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~-~~~~ei~~hp~f~~~~~~~~~~~~~~ 310 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS-NGVEEIKSHPFFEGVDWGHIRERPAA 310 (360)
T ss_pred CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCC-CCHHHHhcCCCCCCCCHHHHhcCCCC
Confidence 9888888887753 34556555678999999999874 99999963 23899999999999999998665433
No 47
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3e-42 Score=388.43 Aligned_cols=273 Identities=37% Similarity=0.704 Sum_probs=231.5
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||||++.+...........+..|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999875444445566777888888876 799999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--------- 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--------- 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---------
Confidence 9999998764 45999999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 211 (320)
T cd05590 150 ------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211 (320)
T ss_pred ------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999999999999999999999999999999999988888888877
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh--cHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~--~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. .++.++.+||.+||+.||.+||++.. ..+++++||||+.++|..+.....+....|.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 276 (320)
T cd05590 212 EVVYPT--WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPR 276 (320)
T ss_pred CCCCCC--CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 666554 36889999999999999999999432 2489999999999999987544333223344
No 48
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-42 Score=390.00 Aligned_cols=259 Identities=33% Similarity=0.559 Sum_probs=236.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~l 746 (1002)
...|++.+.||.|.||.||+|.++.+|+.+|+|++.+...........+.+|+.||+++. |||||.++++|++.+.+|+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 468999999999999999999999999999999999887766666778899999999998 9999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC----CcEEEEeccCCcccC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~----g~vkL~DFG~a~~~~ 822 (1002)
|||+|.||.|++.+... .+++..+..++.|++.++.|||+.||+||||||+|+|+... +.+|++|||+|....
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 99999999999999876 39999999999999999999999999999999999999743 579999999996643
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. .......+|||.|+|||++....|+..+||||+|+++|.|++|.+||.+.+
T Consensus 191 ~----------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 191 P----------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred C----------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence 2 123456799999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 903 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.......+..+.+.++ .+..++..+++||++||..||.+|+| +.++|+|||+++.
T Consensus 243 ~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t----a~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 243 EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT----AAQALQHPWIKSI 299 (382)
T ss_pred hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC----HHHHhcCccccCC
Confidence 9999999999877654 45678999999999999999999999 9999999999875
No 49
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.3e-42 Score=396.41 Aligned_cols=307 Identities=40% Similarity=0.709 Sum_probs=247.7
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+..|+.++..++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998765444456677889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999875 569999999999999999999999999999999999999999999999999987654322110
Q ss_pred CCcchhhhhcc--cCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 829 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........... ....................||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 00000000000 0000000000011123346799999999999999999999999999999999999999999888888
Q ss_pred HHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCcc
Q 001869 907 FANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 983 (1002)
Q Consensus 907 ~~~i~~--~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~ 983 (1002)
+..+.. ....+|....++.++.+||.+||. ||.+|+++ ++++++||||++++|.......+| .+|.++...
T Consensus 239 ~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s---~~~ll~hp~~~~~~~~~~~~~~~~--~~~~~~~~~ 311 (350)
T cd05573 239 YNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGS---FEEIKSHPFFKGIDWENLRETKPP--FVPELSSPL 311 (350)
T ss_pred HHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCC---HHHHhcCCCcCCCCHHHHhhCCCC--cCCCCCCch
Confidence 888877 555666666679999999999998 99999985 889999999999999988766665 346555443
No 50
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.5e-42 Score=387.75 Aligned_cols=270 Identities=35% Similarity=0.692 Sum_probs=233.6
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC-CCcceEEEEEEeCCeEEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~lV~ 748 (1002)
+|++++.||+|+||.||+|.+..+++.||||++.+...........+..|+.++..++| ++|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 58899999999999999999999999999999987654444556678889999999976 56888999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++|++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~---- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG---- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC----
Confidence 999999999998764 45899999999999999999999999999999999999999999999999988432100
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (324)
T cd05587 155 -----------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ 211 (324)
T ss_pred -----------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011224579999999999999999999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
.+......++. .++.++.+||.+||..||.+|++.. ...+++++||||++++|..+....
T Consensus 212 ~i~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~ 272 (324)
T cd05587 212 SIMEHNVSYPK--SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERRE 272 (324)
T ss_pred HHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCC
Confidence 88877666554 4688999999999999999999853 345899999999999999885443
No 51
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.6e-42 Score=396.22 Aligned_cols=285 Identities=34% Similarity=0.629 Sum_probs=235.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++.+|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999999999999999997654444445566788999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|||||+||+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999999653 48999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.
T Consensus 197 --------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred --------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 01123467999999999997643 678999999999999999999999999
Q ss_pred ChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 902 TRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 902 ~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+....+..+.... +.+|....++..+++|+.+||..++.+ |++ +.++++||||+...|........+....|
T Consensus 251 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~----~~e~l~hp~~~~~~~~~~~~~~~~~~~~p 326 (370)
T cd05621 251 SLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNG----VEEIKQHPFFKNDQWNWDNIRETAAPVVP 326 (370)
T ss_pred CHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCC----HHHHhcCcccCCCCcChHhcCCCCCCcCC
Confidence 8888888887643 556666667899999999999855543 778 99999999999966654322222223456
Q ss_pred CCCCcc
Q 001869 978 LFATDT 983 (1002)
Q Consensus 978 ~~~~~~ 983 (1002)
.++.+.
T Consensus 327 ~~~~~~ 332 (370)
T cd05621 327 ELSSDI 332 (370)
T ss_pred CCCCcc
Confidence 655554
No 52
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.1e-42 Score=397.17 Aligned_cols=293 Identities=38% Similarity=0.637 Sum_probs=234.0
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 58999999999999999999999999999999987544445566788899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
||++|+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999999764 4589999999999999999999999999999999999999999999999999854321111000
Q ss_pred Ccchhhhhc-------ccCCCC-------------CccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHH
Q 001869 830 PTTNEKKRR-------HKGQQN-------------PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 830 ~~~~~~~~~-------~~~~~~-------------~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
.......+. ..+... ............+.+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 000000000 000000 000000011123568999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 890 EMLYGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 890 elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
+|++|++||.+.+..+....+... ....|....+++++.+||.+|+ .+|.+|++ ...+.++++||||+.++|...
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~-~~~~~ei~~hp~f~~~~~~~~ 316 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG-KNGADEIKAHPFFKTIDFSSD 316 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC-CCCHHHHhcCCCcCCcChHHH
Confidence 999999999998887777777653 3445555667899999999986 59999997 345899999999999999864
No 53
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.5e-42 Score=387.74 Aligned_cols=266 Identities=41% Similarity=0.773 Sum_probs=229.8
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHH---HhCCCCCcceEEEEEEeCCeEEEE
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL---DMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il---~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
|++++.||+|+||.||+|.+..+++.||||++++...........+..|+.++ +.++||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78899999999999999999999999999999875444444556677776665 456799999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.|++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--- 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC---
Confidence 999999999988754 45899999999999999999999999999999999999999999999999987432100
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus 155 ------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~ 210 (324)
T cd05589 155 ------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210 (324)
T ss_pred ------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 01123467999999999999999999999999999999999999999998888888
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhc
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
..+......+|. .++..+.+||.+||+.||.+||++.+ .+.++++||||++++|..+..
T Consensus 211 ~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~ 270 (324)
T cd05589 211 DSIVNDEVRYPR--FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLA 270 (324)
T ss_pred HHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHh
Confidence 888877666554 46889999999999999999996553 499999999999999997743
No 54
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-42 Score=392.74 Aligned_cols=279 Identities=37% Similarity=0.676 Sum_probs=239.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|.+.+.||+|+||.||+|.+..+++.||+|++++...........+..|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765444556667888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-- 157 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-- 157 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--
Confidence 999999999999765 24599999999999999999999999999999999999999999999999999865321100
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc------CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~------~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.......||+.|+|||++. +..++.++|||||||++|+|++|..||...+
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 158 ------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 0112346899999999986 4567789999999999999999999999988
Q ss_pred hHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 903 RQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 903 ~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
....+.+++... ..++....++..+.+||.+||+ +|.+||+ ++++++||||+.++|..+....+| .+|.+.
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t----~~~l~~h~~~~~~~~~~~~~~~~~--~~~~~~ 286 (330)
T cd05601 214 SAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLG----YEGLCCHPFFSKIDWNNIRNSLPP--FVPTLK 286 (330)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCC----HHHHhCCCCcCCCCHHHHhhCCCC--ccCcCC
Confidence 888888776543 4556666688999999999998 9999999 999999999999999999876666 345544
Q ss_pred C
Q 001869 981 T 981 (1002)
Q Consensus 981 ~ 981 (1002)
.
T Consensus 287 ~ 287 (330)
T cd05601 287 S 287 (330)
T ss_pred C
Confidence 4
No 55
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.8e-42 Score=387.01 Aligned_cols=273 Identities=39% Similarity=0.724 Sum_probs=233.0
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||||++.+...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999876544455566777889998866 799999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--------- 149 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--------- 149 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 211 (321)
T cd05591 150 ------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211 (321)
T ss_pred ------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 01122457999999999999989999999999999999999999999999988888888887
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh---cHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~---~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...+|. .++.++.+||.+||+.||.+|+++.. .++++++||||..++|..+..........|.
T Consensus 212 ~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T cd05591 212 DVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPK 277 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCC
Confidence 766554 36889999999999999999994432 3999999999999999988554443333343
No 56
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.2e-42 Score=387.80 Aligned_cols=264 Identities=41% Similarity=0.742 Sum_probs=227.7
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654433444455555655 46789999999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~---------- 148 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE---------- 148 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc----------
Confidence 9999998764 4589999999999999999999999999999999999999999999999999853210
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 211 (323)
T cd05575 149 -----------------HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK 211 (323)
T ss_pred -----------------CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 011123457999999999999999999999999999999999999999998888888888877
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhcc
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 969 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~ 969 (1002)
...++. ..+..+.+||.+||+.||.+||+..+.+.++++||||..++|..+...
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~ 265 (323)
T cd05575 212 PLRLKP--NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNK 265 (323)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhc
Confidence 655543 468899999999999999999998777899999999999999988543
No 57
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-43 Score=369.54 Aligned_cols=260 Identities=27% Similarity=0.422 Sum_probs=223.1
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-----CCe
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KTH 743 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~~ 743 (1002)
..|..++.||.|+||.|+.+.++.+|+.||||.+... +......++..+|+.+|+.++|+||+.+++++.. -+.
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 5677789999999999999999999999999998754 4567778899999999999999999999999865 467
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+|+|+| +.+|...++.+ ..+++++++.+++||+.||+|+|+.||+||||||+|+|++.+..+||||||+|+....
T Consensus 101 vYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred eEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence 99999999 88999999875 4499999999999999999999999999999999999999999999999999987642
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
... ...-...+.|.+|.|||++. ...|+.+.||||+|||+.||++|++.|.|.+
T Consensus 178 ~~~-------------------------~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d 232 (359)
T KOG0660|consen 178 FFE-------------------------DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD 232 (359)
T ss_pred cCc-------------------------ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc
Confidence 200 01123468899999999974 4678999999999999999999999999988
Q ss_pred hHHHHHHHHhC-----------------------CCCCC------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 903 RQKTFANILHK-----------------------DLKFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~~-----------------------~~~~~------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
..+++..|+.- -...| ..+..++.+.+||.+||..||.+|+| ++|+|
T Consensus 233 ~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit----a~eAL 308 (359)
T KOG0660|consen 233 YVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT----AEEAL 308 (359)
T ss_pred hHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC----HHHHh
Confidence 88777766541 01111 12457889999999999999999999 99999
Q ss_pred cCCCcCCC
Q 001869 954 KHPFFKGV 961 (1002)
Q Consensus 954 ~Hp~f~~~ 961 (1002)
+||||...
T Consensus 309 ~hPYl~~~ 316 (359)
T KOG0660|consen 309 AHPYLAPY 316 (359)
T ss_pred cChhhhhh
Confidence 99999984
No 58
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.1e-42 Score=389.24 Aligned_cols=263 Identities=43% Similarity=0.785 Sum_probs=227.6
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765545556677788999999999999999999999999999999999999
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
+|..++... ..+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--------- 149 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--------- 149 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---------
Confidence 999988764 458999999999999999999997 79999999999999999999999999998532100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~ 211 (325)
T cd05594 150 ------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211 (325)
T ss_pred ------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC
Confidence 01112457999999999999999999999999999999999999999998887777777776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhc
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
...+|. .++.++.+||.+||+.||.+|++.. +.+.++++||||+++.|.....
T Consensus 212 ~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~ 265 (325)
T cd05594 212 EIRFPR--TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYE 265 (325)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 666654 4688999999999999999998321 1299999999999999997743
No 59
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.9e-42 Score=386.10 Aligned_cols=278 Identities=35% Similarity=0.665 Sum_probs=237.5
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+|++++.||+|+||.||+|.+..+++.||||++.+...........+..|..++..+ .|++|+.+++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 488999999999999999999999999999999876544444555667788888777 5899999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC----
Confidence 999999999998764 45899999999999999999999999999999999999999999999999998532110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~ 211 (323)
T cd05616 155 -----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 211 (323)
T ss_pred -----------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011224579999999999999999999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.+......+|. ..+.++.+|+.+||+.||.+|++.. +...++++||||+.++|..+.....+....|.
T Consensus 212 ~i~~~~~~~p~--~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05616 212 SIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPK 280 (323)
T ss_pred HHHhCCCCCCC--cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCc
Confidence 88887766664 4688999999999999999999853 34689999999999999988544443334444
No 60
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.8e-42 Score=383.89 Aligned_cols=269 Identities=37% Similarity=0.741 Sum_probs=226.1
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh-CCCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM-LDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||||++++..............|..++.. ++||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 468999999999999999999999999987543333344556677888876 4899999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---------
Confidence 9999999764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~ 211 (316)
T cd05619 150 ------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD 211 (316)
T ss_pred ------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01122457999999999999999999999999999999999999999998888777777665
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH-HHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~-elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. .++.++++||.+||+.||.+||+ +. ++++||||+.++|..+.....+....|.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05619 212 NPCYPR--WLTREAKDILVKLFVREPERRLG----VKGDIRQHPFFREIDWSALEEREIEPPFKPK 271 (316)
T ss_pred CCCCCc--cCCHHHHHHHHHHhccCHhhcCC----ChHHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 554443 36888999999999999999999 64 8999999999999988554433333444
No 61
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.2e-41 Score=380.61 Aligned_cols=312 Identities=58% Similarity=1.013 Sum_probs=256.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+..|+++++.++||||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 37999999999999999999999999999999998765544456678889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.|++|.+++.......+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999987656679999999999999999999999999999999999999999999999999986543221110
Q ss_pred CCcchhhhhcc--cCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 829 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........... ....................||..|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 00000000000 0000000001111223456899999999999998899999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
+..+......++.....+..++++|.+||..||.+||++...++++|+||||++++|..++-..+|..+.|.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (316)
T cd05574 241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRPDDG 314 (316)
T ss_pred HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCcccc
Confidence 88888777777766667899999999999999999999999999999999999999999999888877665443
No 62
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=9.7e-42 Score=384.00 Aligned_cols=273 Identities=39% Similarity=0.731 Sum_probs=231.3
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||||++++...........+..|+.+++.+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876544555567778899999888 799999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 149 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--------- 149 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---------
Confidence 9999998764 45999999999999999999999999999999999999999999999999988431100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~ 211 (318)
T cd05570 150 ------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211 (318)
T ss_pred ------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 01122457999999999999999999999999999999999999999998888888888777
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. .++..+.+||++||+.||.+||++. ..+.++++||||+.++|.............|.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (318)
T cd05570 212 EVRYPR--WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPK 275 (318)
T ss_pred CCCCCC--cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 666554 4688999999999999999999931 12399999999999999877544433333343
No 63
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.1e-41 Score=383.11 Aligned_cols=270 Identities=40% Similarity=0.787 Sum_probs=227.9
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||||++++...........+..|..++..+ +||||+++++++..++.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876444444555666677777654 899999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--------- 149 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---------
Confidence 9999998764 45999999999999999999999999999999999999999999999999998542110
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 211 (316)
T cd05592 150 ------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND 211 (316)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999988999999999999999999999999998888887777665
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. .++.++.+||.+||+.||.+||+. ..++++||||+.++|..+.....+....|.
T Consensus 212 ~~~~~~--~~~~~~~~ll~~~l~~~P~~R~~~---~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05592 212 RPHFPR--WISKEAKDCLSKLFERDPTKRLGV---DGDIRQHPFFRGIDWERLEKREIPPPFKPK 271 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 554443 468889999999999999999983 358999999999999988655544444444
No 64
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-41 Score=385.27 Aligned_cols=266 Identities=38% Similarity=0.746 Sum_probs=224.5
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+ +||||+++++++.+.+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555667788899999988 799999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---------- 148 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc----------
Confidence 9999988764 4599999999999999999999999999999999999999999999999999853110
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---------ChH
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---------TRQ 904 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~---------~~~ 904 (1002)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||... ...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05588 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence 001123467999999999999999999999999999999999999999531 112
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccCC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNP 971 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~~ 971 (1002)
.....+......+|. .++..+.+||.+||+.||.+|+++. ..++++++||||..++|..+.....
T Consensus 212 ~~~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~ 278 (329)
T cd05588 212 YLFQVILEKQIRIPR--SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQV 278 (329)
T ss_pred HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCC
Confidence 234455555555554 4688999999999999999999843 2379999999999999998855443
No 65
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.7e-41 Score=382.88 Aligned_cols=270 Identities=36% Similarity=0.690 Sum_probs=233.5
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+|+..+.||+|+||.||+|.+..+++.||||++.+...........+..|..++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999999999999999998754444445567778888988885 578889999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~---- 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD---- 154 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC----
Confidence 999999999998764 45999999999999999999999999999999999999999999999999998532110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (323)
T cd05615 155 -----------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 211 (323)
T ss_pred -----------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011224569999999999999889999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
.+......+|. .++.++.+|+.+||+.||.+|++.. ...+++++||||+.++|..+....
T Consensus 212 ~i~~~~~~~p~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~ 272 (323)
T cd05615 212 SIMEHNVSYPK--SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENRE 272 (323)
T ss_pred HHHhCCCCCCc--cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCC
Confidence 88887766654 3688999999999999999999864 357899999999999999885543
No 66
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=385.07 Aligned_cols=296 Identities=38% Similarity=0.643 Sum_probs=267.4
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.++.+.+++++..||-|+||.|=++........+|+|++++..+.+..+...+..|..||..+++|+||++|-.|.+..+
T Consensus 415 a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky 494 (732)
T KOG0614|consen 415 AQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY 494 (732)
T ss_pred cccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh
Confidence 34667789999999999999999999877766799999999888888888999999999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|++||-|-||.|+..+..+ +.+.+...++|+..+++|++|||.+|||+|||||+|++++.+|.+||+|||+|+....
T Consensus 495 vYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999999999875 5699999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
...+.++||||.|.|||++.+..++.++|.||||+++|||++|.+||.+.++
T Consensus 573 ----------------------------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 573 ----------------------------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred ----------------------------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 2456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 904 QKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 904 ~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
...|..|+++- +.+| ..++..+.+||++++..+|.+|+.+- .++.+|.+|.||.++||.-++...-|....|.++
T Consensus 625 mktYn~ILkGid~i~~P--r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va 702 (732)
T KOG0614|consen 625 MKTYNLILKGIDKIEFP--RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVA 702 (732)
T ss_pred HHHHHHHHhhhhhhhcc--cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCC
Confidence 99999999874 4455 45678899999999999999999863 5799999999999999999977776666789998
Q ss_pred CccccccccCC
Q 001869 981 TDTEKEYKVVD 991 (1002)
Q Consensus 981 ~~~~~~~~~~~ 991 (1002)
-+++-.|...-
T Consensus 703 ~ptD~s~Fd~~ 713 (732)
T KOG0614|consen 703 NPTDVSNFDNF 713 (732)
T ss_pred CcccchhccCC
Confidence 88887776543
No 67
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8.8e-42 Score=385.57 Aligned_cols=273 Identities=41% Similarity=0.719 Sum_probs=231.5
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+|+.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||+.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654434444455556655 46778999999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--------- 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--------- 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---------
Confidence 9999988764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~ 211 (325)
T cd05604 150 ------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211 (325)
T ss_pred ------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999998888888888876
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
...++. ..+..+.++|.+||..||.+||+..+.+.++++||||+.++|..+.....|....|.
T Consensus 212 ~~~~~~--~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~ 274 (325)
T cd05604 212 PLVLRP--GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPN 274 (325)
T ss_pred CccCCC--CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCc
Confidence 654443 478889999999999999999998888899999999999999988654433333443
No 68
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.5e-41 Score=390.32 Aligned_cols=280 Identities=35% Similarity=0.648 Sum_probs=233.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 35568999999999999999999999999999999999765444444556678899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999998753 4899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
. .......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred C--------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 0 01123467999999999997543 67899999999999999999999999
Q ss_pred CChHHHHHHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCC---CCCChhcHHHHHcCCCcCCCChh--hhhccCCCC
Q 001869 901 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS---RLGSHEGANEIKKHPFFKGVNWA--LVRCMNPPE 973 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~---Rpt~~~~a~elL~Hp~f~~~~~~--~~~~~~~~~ 973 (1002)
.+....+..++... +.++....++..+++||.+||. +|.. |++ ++++++||||++.+|. .++...+|
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~----~~ei~~h~~~~~~~~~~~~~~~~~~~- 323 (371)
T cd05622 250 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNG----VEEIKRHLFFKNDQWAWETLRDTVAP- 323 (371)
T ss_pred CCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCC----HHHHhcCcccCCCChhHHhcCCCCCC-
Confidence 98888888887643 5566666789999999999998 5555 556 9999999999996664 44443333
Q ss_pred CCCCCCC
Q 001869 974 LDAPLFA 980 (1002)
Q Consensus 974 ~~~p~~~ 980 (1002)
.+|.+.
T Consensus 324 -~~~~~~ 329 (371)
T cd05622 324 -VVPDLS 329 (371)
T ss_pred -CCCCCC
Confidence 445433
No 69
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.6e-41 Score=381.79 Aligned_cols=262 Identities=39% Similarity=0.765 Sum_probs=223.3
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+ +||||+++++++.+.+.+|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4689999999999999999999999999875433334455667788887754 899999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999988431100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (316)
T cd05620 150 ------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD 211 (316)
T ss_pred ------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01123467999999999999999999999999999999999999999998888777777666
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccC
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
...++. .++.++++||.+||+.||.+|++. ..++++||||+.++|..+....
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~~~---~~~~~~h~~f~~~~~~~~~~~~ 263 (316)
T cd05620 212 TPHYPR--WITKESKDILEKLFERDPTRRLGV---VGNIRGHPFFKTINWTALEKRE 263 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCCCcCCCCHHHHHhCC
Confidence 555554 368899999999999999999992 3689999999999999774443
No 70
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-42 Score=383.75 Aligned_cols=309 Identities=37% Similarity=0.626 Sum_probs=256.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+....|..++.||-|+||.|.+++-..|...||+|.+++..+..+..+..+..|..||..-+++-||+||..|++.+.+|
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence 44567999999999999999999999999999999999988888889999999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||+|++||++-.+|.+. +.|+++.+++|+..|.+|++++|+.|+|||||||+|||||.+|+|||.|||++.-+....
T Consensus 706 FVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred EEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999999999875 669999999999999999999999999999999999999999999999999986543332
Q ss_pred CCCCCcchhhhhcccCCCCCccccc---------------cCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAE---------------PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~e 890 (1002)
...++...+..|....+..+.+... ........+||+.|+|||++....|+..+|+||.|||||+
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 2222222222222111111110000 0112346799999999999999999999999999999999
Q ss_pred HHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhc
Q 001869 891 MLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 891 lltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
|+.|++||...++.+...++.. .-+.++....+|.++.+||.++++ +++.|+. +.+++++..||||+++||..+|.
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLG-kng~d~vKaHpfFkgIDfsslRk 941 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLG-KNGADQVKAHPFFKGIDFSSLRK 941 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhc-ccchhhhhcCccccccchHhhhh
Confidence 9999999998888776666654 345667777899999999998776 7899998 55688999999999999999988
Q ss_pred cCCCCCCCCCCC
Q 001869 969 MNPPELDAPLFA 980 (1002)
Q Consensus 969 ~~~~~~~~p~~~ 980 (1002)
...| -+|...
T Consensus 942 q~Ap--YIP~It 951 (1034)
T KOG0608|consen 942 QRAP--YIPRIT 951 (1034)
T ss_pred ccCC--cCcccc
Confidence 8877 445544
No 71
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.9e-41 Score=372.44 Aligned_cols=272 Identities=32% Similarity=0.559 Sum_probs=225.9
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcH
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|+||.||++.+..+|+.||+|.+.............+..|+++++.++||||+++++++..+.++|+||||+.|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999999765443333444556799999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001869 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++.......++...+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~------------ 148 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG------------ 148 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC------------
Confidence 98887655556899999999999999999999999999999999999999999999999998543210
Q ss_pred hcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHHHh
Q 001869 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANILH 912 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~ 912 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||.+... .........
T Consensus 149 ----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05607 149 ----------------KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE 212 (277)
T ss_pred ----------------ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc
Confidence 011224689999999999988899999999999999999999999976432 233333444
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
.....+ ...++.++.+||.+||+.||.+||++.+.++++++||||++++|..++....|..++|
T Consensus 213 ~~~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05607 213 DEVKFE-HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFVP 276 (277)
T ss_pred cccccc-cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCCCCCCC
Confidence 333332 2347889999999999999999999877779999999999999999876655544444
No 72
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.5e-41 Score=382.37 Aligned_cols=265 Identities=38% Similarity=0.739 Sum_probs=222.9
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555666778899888776 899999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--------- 149 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--------- 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC---------CChH
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG---------KTRQ 904 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~---------~~~~ 904 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.. ....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05618 150 ------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 211 (329)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence 0112345799999999999999999999999999999999999999952 1122
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
.....+......+|. ..+..+.+||.+||+.||.+||++. ..+.++++||||+.++|..+...+
T Consensus 212 ~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~ 277 (329)
T cd05618 212 YLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQ 277 (329)
T ss_pred HHHHHHhcCCCCCCC--CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCC
Confidence 334455555555554 4688899999999999999999853 236899999999999998775433
No 73
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.5e-41 Score=382.12 Aligned_cols=277 Identities=37% Similarity=0.689 Sum_probs=230.2
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++++...........+..|+.++.++ +||||+.+++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555667788899999888 699999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--------- 149 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--------- 149 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999988532100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-------ChHHH
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-------TRQKT 906 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~-------~~~~~ 906 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... .....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~ 211 (327)
T cd05617 150 ------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211 (327)
T ss_pred ------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence 01123467999999999999999999999999999999999999999532 22233
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 982 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 982 (1002)
...+......+|. ..+..+.++|.+||..||.+|++.. ..+.++++||||+.++|..+.....+....|....+
T Consensus 212 ~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
T cd05617 212 FQVILEKPIRIPR--FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDD 287 (327)
T ss_pred HHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCCC
Confidence 4444455444443 4688899999999999999999843 347899999999999999987666554455554433
No 74
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-42 Score=372.92 Aligned_cols=262 Identities=31% Similarity=0.496 Sum_probs=235.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
-+-|.+.+.||+|-|.+|-+|++..+|..||||++.+..+.. .....+.+|+..|+.++|||||++|++......+|+|
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 357999999999999999999999999999999999876544 3446678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc-cCCcEEEEeccCCcccCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~-~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
+|+-++|+|+||+.+.. ..+.++..+.|+.||+.|+.|+|+..+|||||||+||+|- .-|-|||.|||++..+.
T Consensus 96 LELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~---- 170 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ---- 170 (864)
T ss_pred EEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC----
Confidence 99999999999998754 4599999999999999999999999999999999998776 56899999999985432
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCC-hhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~-~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
+.....+.||+..|-|||+|.|..|+. ++||||||||||-|+||++||...+..+
T Consensus 171 ------------------------PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE 226 (864)
T KOG4717|consen 171 ------------------------PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE 226 (864)
T ss_pred ------------------------CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh
Confidence 123345789999999999999998874 8999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
.+..|+..++..|.. .+.++++||..||..||.+|.+ +++|..|+|++++|-..
T Consensus 227 TLTmImDCKYtvPsh--vS~eCrdLI~sMLvRdPkkRAs----lEeI~s~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 227 TLTMIMDCKYTVPSH--VSKECRDLIQSMLVRDPKKRAS----LEEIVSTSWLQAGDRGL 280 (864)
T ss_pred hhhhhhcccccCchh--hhHHHHHHHHHHHhcCchhhcc----HHHHhccccccCCCCCc
Confidence 999999998887764 7899999999999999999999 99999999999976543
No 75
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.1e-41 Score=380.75 Aligned_cols=264 Identities=45% Similarity=0.799 Sum_probs=225.3
Q ss_pred ccccccCCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 674 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
++.||+|+||.||+|.+. .+++.||+|++.+.... .......+..|+.+++.++||||++++++|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 46889999999864322 22334567789999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 153 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE----- 153 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-----
Confidence 99999999999764 45889999999999999999999999999999999999999999999999998532110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 154 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~ 211 (323)
T cd05584 154 ----------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK 211 (323)
T ss_pred ----------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 0112235799999999999998899999999999999999999999999888888888
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhc
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
+......++. .++..+.+||.+||+.||.+||++. ..+.++++||||+..+|..+..
T Consensus 212 ~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~ 269 (323)
T cd05584 212 ILKGKLNLPP--YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLA 269 (323)
T ss_pred HHcCCCCCCC--CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhc
Confidence 8877666554 4688999999999999999999322 2299999999999999988743
No 76
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.9e-41 Score=381.31 Aligned_cols=263 Identities=40% Similarity=0.711 Sum_probs=225.3
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHH-HHHHhCCCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER-EILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|. .+++.++||||+++++++...+.+|+||||+.|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999865333333333444444 456788999999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--------- 149 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--------- 149 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---------
Confidence 9999999764 45889999999999999999999999999999999999999999999999998532110
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (325)
T cd05602 150 ------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 211 (325)
T ss_pred ------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhc
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
...++ ..++..+.+||.+||+.||.+|++..+.+.++++|+||..++|..+..
T Consensus 212 ~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~ 264 (325)
T cd05602 212 PLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLIN 264 (325)
T ss_pred CcCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHh
Confidence 55443 357889999999999999999999888889999999999999998853
No 77
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.7e-41 Score=372.19 Aligned_cols=272 Identities=32% Similarity=0.584 Sum_probs=223.8
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcH
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++||||+++++++...+.+|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999999999999999865444444456677899999999999999999999999999999999999999
Q ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001869 757 FLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 757 ~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 9887432 23468999999999999999999999999999999999999999999999999985432110
Q ss_pred hhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH----HHHHHH
Q 001869 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ----KTFANI 910 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~----~~~~~i 910 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+
T Consensus 152 ------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 213 (280)
T cd05608 152 ------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI 213 (280)
T ss_pred ------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh
Confidence 1112357899999999999999999999999999999999999999765432 222333
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
......++ ..++..+.+|+.+||+.||.+||++.+ .++++++||||++++|..+.....|....|
T Consensus 214 ~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~ 279 (280)
T cd05608 214 LNDSVTYP--DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP 279 (280)
T ss_pred cccCCCCc--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCC
Confidence 33333322 347889999999999999999996543 499999999999999998866555544444
No 78
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.4e-41 Score=384.85 Aligned_cols=273 Identities=40% Similarity=0.718 Sum_probs=229.4
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
||+|+||.||+|.+..+++.||+|++.+..............|..++..+ +||||+.+++++...+.+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999765443444445566677777655 699999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--------- 149 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--------- 149 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---------
Confidence 9999998764 45999999999999999999999999999999999999999999999999998542110
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHh
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 912 (1002)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~ 211 (330)
T cd05586 150 ------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF 211 (330)
T ss_pred ------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence 0112345799999999998764 478899999999999999999999999888888888887
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCC
Q 001869 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 979 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 979 (1002)
+...++.. .++.++.+||.+||+.||.+||+..+.+.++++||||..++|..+.....+....|..
T Consensus 212 ~~~~~~~~-~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~ 277 (330)
T cd05586 212 GKVRFPKN-VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKPIV 277 (330)
T ss_pred CCCCCCCc-cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCccCCC
Confidence 77666643 3688999999999999999999877779999999999999999875443333334443
No 79
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.7e-41 Score=379.80 Aligned_cols=263 Identities=43% Similarity=0.756 Sum_probs=225.9
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654433334445555554 67889999999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--------- 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---------
Confidence 9999988764 45899999999999999999999999999999999999999999999999988532100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (321)
T cd05603 150 ------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK 211 (321)
T ss_pred ------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999988999999999999999999999999998888888888777
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhc
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
...++. ..+..+.++|.+||+.||.+|++....+.++++|+||..++|..+..
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T cd05603 212 PLQLPG--GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYH 264 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhc
Confidence 655553 46788999999999999999999777788999999999999998743
No 80
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=380.19 Aligned_cols=258 Identities=27% Similarity=0.433 Sum_probs=228.1
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|..+..||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+|..++++||.++|+.|..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 46888899999999999999999999999999998653 4556778899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.||++.+.++.. ..+.+..+..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||++..+..
T Consensus 91 ey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~----- 163 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN----- 163 (467)
T ss_pred HHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec-----
Confidence 999999999999763 4468899999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
......+++|||.|||||++.+..|+.++||||||++.|||++|.+||....+...+.
T Consensus 164 ----------------------~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf 221 (467)
T KOG0201|consen 164 ----------------------TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF 221 (467)
T ss_pred ----------------------hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE
Confidence 1123367899999999999999899999999999999999999999999888866555
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.|-+..++..+. .+|+.+++|+..||.+||+.||+ |.+||+|+|++...
T Consensus 222 lIpk~~PP~L~~-~~S~~~kEFV~~CL~k~P~~Rps----A~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 222 LIPKSAPPRLDG-DFSPPFKEFVEACLDKNPEFRPS----AKELLKHKFIKRAK 270 (467)
T ss_pred eccCCCCCcccc-ccCHHHHHHHHHHhhcCcccCcC----HHHHhhhHHHHhcC
Confidence 555554444333 67889999999999999999999 99999999999844
No 81
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.4e-41 Score=360.91 Aligned_cols=262 Identities=27% Similarity=0.454 Sum_probs=222.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCC----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKT---- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~---- 742 (1002)
...|..+++||+|+||+||+|+++.+|+.||+|.++..... ........+|+.+++.|+|+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 45688899999999999999999999999999999865322 223345678999999999999 999999998877
Q ss_pred --eEEEEEecCCCCcHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 743 --HVCLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~~--~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
.+++||||+ .-+|..++..... ..++...++.+++||+.||+|||+++|+||||||.||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 8899999987542 35788999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+.... +.+.....++|.+|+|||++.+. .|+...||||+|||++||+++++.
T Consensus 168 ra~~i---------------------------p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 168 RAFSI---------------------------PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHhcC---------------------------CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 75331 22234567899999999999987 788899999999999999999999
Q ss_pred CCCCChHHHHHHHHhC------------------CCCCCCC----------CCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001869 898 FRGKTRQKTFANILHK------------------DLKFPSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~------------------~~~~~~~----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
|.+.+..+++..|.+- +..++.. ...+.++.+++.+||+++|.+|.| +
T Consensus 221 FpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S----a 296 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRIS----A 296 (323)
T ss_pred CCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcC----H
Confidence 9999998888887651 1112211 222347889999999999999999 9
Q ss_pred HHHHcCCCcCCCC
Q 001869 950 NEIKKHPFFKGVN 962 (1002)
Q Consensus 950 ~elL~Hp~f~~~~ 962 (1002)
+.+|.||||....
T Consensus 297 ~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 297 KGALTHPYFSELP 309 (323)
T ss_pred HHHhcChhhcccc
Confidence 9999999999863
No 82
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.7e-41 Score=379.91 Aligned_cols=280 Identities=37% Similarity=0.664 Sum_probs=232.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++..++|+||+.+++++.+++++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998654444455667888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.|++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG--- 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC---
Confidence 999999999999753 3458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.......+||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 157 -----------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred -----------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 001123469999999999863 4567799999999999999999999999888
Q ss_pred HHHHHHHHhCC--CCCCC-CCCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 904 QKTFANILHKD--LKFPS-STPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 904 ~~~~~~i~~~~--~~~~~-~~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
.+.+..+.... ..++. ...++..+++||++||+.++.. |++ +.++++||||++++|..+....+| ..|.
T Consensus 214 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~----~~~~l~hp~~~~~~~~~~~~~~~~--~~~~ 287 (331)
T cd05597 214 VETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNG----LQDFKDHPFFEGIDWDNIRNSTAP--YVPE 287 (331)
T ss_pred HHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCCCCCCCCHHHHhhCCCC--ccCc
Confidence 88777776543 23332 2346889999999999764433 667 999999999999999998776665 3354
Q ss_pred CCC
Q 001869 979 FAT 981 (1002)
Q Consensus 979 ~~~ 981 (1002)
+..
T Consensus 288 ~~~ 290 (331)
T cd05597 288 VSS 290 (331)
T ss_pred CCC
Confidence 443
No 83
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.3e-41 Score=372.62 Aligned_cols=278 Identities=33% Similarity=0.577 Sum_probs=229.0
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999999999999999976544333444567789999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG----- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-----
Confidence 999999998887654456999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
......+|++.|+|||++.+..++.++|||||||++|+|++|..||.+.........
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05605 156 -----------------------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE 212 (285)
T ss_pred -----------------------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH
Confidence 011234689999999999988899999999999999999999999988665433322
Q ss_pred HH----hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 910 IL----HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 910 i~----~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+. .....+ ...++..+.+||.+||..||.+||++. +.+.++++||||...+|..+.....+....|
T Consensus 213 ~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05605 213 VERRVKEDQEEY--SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP 283 (285)
T ss_pred HHHHhhhccccc--CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCC
Confidence 22 222222 234688899999999999999999332 1299999999999999998865554433333
No 84
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-41 Score=376.02 Aligned_cols=258 Identities=28% Similarity=0.437 Sum_probs=219.4
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT- 742 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 742 (1002)
+.+......+...||.|+||+||++.+.++. .+|+|++......... ...+.+|+.+|.+++|||||++++++.+..
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~ 113 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPG 113 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4455667777888999999999999995442 2999999876544444 778999999999999999999999999887
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-cccCCCCCCCEEEccCC-cEEEEeccCCcc
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG-HVSLTDFDLSCL 820 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g-~vkL~DFG~a~~ 820 (1002)
..+||||||++|+|.+++.......++...+..++.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+++.
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 7999999999999999998744567999999999999999999999999 99999999999999998 999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc--CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
..... .......||+.|||||++. ...|+.++||||||+++|||+||+.||
T Consensus 194 ~~~~~---------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf 246 (362)
T KOG0192|consen 194 KVISK---------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPF 246 (362)
T ss_pred ecccc---------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCC
Confidence 43110 1122367999999999999 668999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 899 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
.+.........+.......+....++..+..|+..||..||..||++.+.+.
T Consensus 247 ~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 247 EDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 9998877777776655544444448889999999999999999999765433
No 85
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6e-41 Score=379.72 Aligned_cols=277 Identities=37% Similarity=0.663 Sum_probs=231.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++..++|+||+.+++++.+.+.+|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997643334445566788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.||+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-- 157 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-- 157 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc--
Confidence 999999999999763 24589999999999999999999999999999999999999999999999999854321100
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 158 ------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred ------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 01123579999999999875 4577899999999999999999999999888
Q ss_pred HHHHHHHHhCC--CCCCCC-CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001869 904 QKTFANILHKD--LKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 904 ~~~~~~i~~~~--~~~~~~-~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
.+.+..+.... ++++.. ..++..+++||.+||+.++. |+. ...++++++||||++++|...+...+|..
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~-~~~-~~~~~~~~~h~~f~~~~~~~~~~~~~~~~ 285 (331)
T cd05624 214 VETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRER-RLG-QNGIEDFKKHAFFEGIDWENIRNLEAPYI 285 (331)
T ss_pred HHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchh-hcC-CCCHHHHhcCCCcCCCCHHHHhhCCCCcc
Confidence 88888777644 333332 34688999999999996654 432 12399999999999999999988777643
No 86
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=8.9e-41 Score=378.50 Aligned_cols=275 Identities=36% Similarity=0.642 Sum_probs=230.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+.+++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999997643334444556788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+|+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 999999999999764 2458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.......+||+.|+|||++. ...++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred -----------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 01112357999999999986 34578899999999999999999999999988
Q ss_pred HHHHHHHHhCCC--CCCCC-CCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001869 904 QKTFANILHKDL--KFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 904 ~~~~~~i~~~~~--~~~~~-~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
.+.+..+..... .+|.. ..++.++++||.+||+.++.. |++ ++++++||||++++|..+.....|..
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~----~~~~~~h~~f~~~~~~~~~~~~~~~~ 285 (332)
T cd05623 214 VETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNG----IEDFKQHPFFTGIDWDNIRNCEAPYI 285 (332)
T ss_pred HHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCC----HHHHhCCCCcCCCCHHHHhhCCCCcc
Confidence 888888876543 33332 356889999999999765544 567 99999999999999999876665533
No 87
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-40 Score=377.74 Aligned_cols=281 Identities=43% Similarity=0.749 Sum_probs=225.8
Q ss_pred CcccccccccCCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
+|++++.||+|+||.||+|.+. .+++.||+|++.+.... .......+..|+.+++.+ +||||+.+++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4889999999999999999874 47899999999764322 223445677899999999 599999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999998764 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC--
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~-- 901 (1002)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||...
T Consensus 159 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 212 (332)
T cd05614 159 E--------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212 (332)
T ss_pred C--------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC
Confidence 0 0112245799999999999765 4788999999999999999999999643
Q ss_pred --ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCC
Q 001869 902 --TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 978 (1002)
Q Consensus 902 --~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 978 (1002)
........+......++ ..++..+.+||.+||+.||.+||++. +.++++++||||+..+|..+.....+....|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
T cd05614 213 RNTQSEVSRRILKCDPPFP--SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPS 290 (332)
T ss_pred CCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 22334444554444443 34688999999999999999999532 23899999999999999887543333234444
Q ss_pred CC
Q 001869 979 FA 980 (1002)
Q Consensus 979 ~~ 980 (1002)
+.
T Consensus 291 ~~ 292 (332)
T cd05614 291 IR 292 (332)
T ss_pred CC
Confidence 43
No 88
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.3e-40 Score=369.45 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=213.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+++|++++.||.|+||.||+|.+..++..||+|.++... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH--EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc--cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 568999999999999999999999999999999987542 122234567899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--- 156 (288)
T cd07871 82 FEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--- 156 (288)
T ss_pred EeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---
Confidence 99996 5899988654 345889999999999999999999999999999999999999999999999998542210
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........|++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~ 212 (288)
T cd07871 157 ------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE 212 (288)
T ss_pred ------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011123468999999999865 5678899999999999999999999998877666
Q ss_pred HHHHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+.... ..++. ....+.++++||.+||++||.+||| ++++|+||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t----~~~~l~hp~f 288 (288)
T cd07871 213 LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS----AEAALRHSYF 288 (288)
T ss_pred HHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHhcCCCC
Confidence 65543310 01111 1245778999999999999999999 9999999998
No 89
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5.7e-41 Score=377.77 Aligned_cols=265 Identities=43% Similarity=0.772 Sum_probs=227.7
Q ss_pred ccccccCCcEEEEEEEE---cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 674 IKPLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
++.||+|+||.||++.+ ..+|+.||+|++.+... .......+..|+.++++++||||+++++++..++.+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 36799999999999987 35789999999986532 222345667899999999999999999999999999999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~------ 151 (318)
T cd05582 80 LRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH------ 151 (318)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC------
Confidence 9999999999764 45899999999999999999999999999999999999999999999999998543211
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i 910 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+
T Consensus 152 ---------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 152 ---------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred ---------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 01122457999999999999888899999999999999999999999998888888888
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccC
Q 001869 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
......+|. .++..+.+||++||+.||.+||++.+ .+.++++||||..++|..+....
T Consensus 211 ~~~~~~~p~--~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (318)
T cd05582 211 LKAKLGMPQ--FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRRE 269 (318)
T ss_pred HcCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcC
Confidence 777666554 36889999999999999999999654 47899999999999999875443
No 90
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-40 Score=369.16 Aligned_cols=257 Identities=26% Similarity=0.377 Sum_probs=212.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 379999999999999999999999999999999876432 2334567788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.++.+..+... ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 154 (287)
T cd07848 80 EYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--- 154 (287)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc---
Confidence 99988777655433 2458999999999999999999999999999999999999999999999999986532110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
........|++.|+|||++.+..++.++|||||||++|+|++|++||.+.+......
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~ 211 (287)
T cd07848 155 -----------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211 (287)
T ss_pred -----------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123568999999999999889999999999999999999999998876655444
Q ss_pred HHHhCC-------------------CCCCC-----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 909 NILHKD-------------------LKFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~-------------------~~~~~-----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+.... ..++. ...++..+.+||++||++||.+||| ++++|+||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s----~~~~l~hp~f 287 (287)
T cd07848 212 TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYL----TEQCLNHPAF 287 (287)
T ss_pred HHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 332210 01111 0125778999999999999999999 9999999998
No 91
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-40 Score=371.51 Aligned_cols=261 Identities=25% Similarity=0.414 Sum_probs=210.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875421 22234567899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 156 (303)
T cd07869 82 FEYV-HTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP--- 156 (303)
T ss_pred EECC-CcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC---
Confidence 9999 57888887654 345899999999999999999999999999999999999999999999999998542211
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-HH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QK 905 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~-~~ 905 (1002)
........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+... ..
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 212 (303)
T cd07869 157 ------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD 212 (303)
T ss_pred ------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 011123468999999999865 4578899999999999999999999987543 23
Q ss_pred HHHHHHhC--CC---CC------------------C-------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 906 TFANILHK--DL---KF------------------P-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 906 ~~~~i~~~--~~---~~------------------~-------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.+..+... .. .+ + .....+..+.+||.+||+.||.+||| +.++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s----~~~~l~h 288 (303)
T cd07869 213 QLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS----AQAALSH 288 (303)
T ss_pred HHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC----HHHHhcC
Confidence 33332210 00 00 0 00123467889999999999999999 9999999
Q ss_pred CCcCCCCh
Q 001869 956 PFFKGVNW 963 (1002)
Q Consensus 956 p~f~~~~~ 963 (1002)
|||+.+++
T Consensus 289 ~~f~~~~~ 296 (303)
T cd07869 289 EYFSDLPP 296 (303)
T ss_pred cccccCCh
Confidence 99998754
No 92
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.9e-41 Score=381.61 Aligned_cols=253 Identities=29% Similarity=0.501 Sum_probs=219.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-C-----CCcceEEEEEEeCCe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-----PFVPALYASFQTKTH 743 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-----pnIv~l~~~~~~~~~ 743 (1002)
+|.+++.||+|+||.|-+|.+.+|++.||||+++.. +....+...|+.||..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 899999999999999999999999999999999753 456677788999999996 4 389999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC--CcEEEEeccCCccc
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLT 821 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~--g~vkL~DFG~a~~~ 821 (1002)
.|||+|++ .-+|+++++.+....++...++.++.||+.||.+||+.||||+||||+|||+..- ..|||+|||.|+..
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999999 8999999999888889999999999999999999999999999999999999854 47999999999764
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... . .+.+-+..|+|||++.|.+|+.+.||||||||+.||++|.+.|.|.
T Consensus 342 ~q~-----------------------------v-ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 342 SQR-----------------------------V-YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CCc-----------------------------c-eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 311 1 1567889999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhC--------------------C-C-------------------------------CCC-CC-------C
Q 001869 902 TRQKTFANILHK--------------------D-L-------------------------------KFP-SS-------T 921 (1002)
Q Consensus 902 ~~~~~~~~i~~~--------------------~-~-------------------------------~~~-~~-------~ 921 (1002)
+..+++..|+.- . . ..| .. .
T Consensus 392 ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~ 471 (586)
T KOG0667|consen 392 NEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLP 471 (586)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcc
Confidence 999888877541 0 0 001 00 0
Q ss_pred -CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 922 -PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 922 -~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.....+.+||.+||.+||.+|+| ..++|+||||++.
T Consensus 472 ~~~~~~F~dflk~~L~~dP~~R~t----p~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 472 KADDKLFIDFLKRCLEWDPAERIT----PAQALNHPFLTGT 508 (586)
T ss_pred cccHHHHHHHHHHHhccCchhcCC----HHHHhcCcccccc
Confidence 11235689999999999999999 9999999999964
No 93
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=360.55 Aligned_cols=286 Identities=35% Similarity=0.658 Sum_probs=253.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+...+|..+.+||+|+||.|.++..+++...||||+++++.+.....+.--..|..+|... +-|.+++++.+|++-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 46677899999999999999999999999999999999999888777777777888888877 46899999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+.||+|--.++.- +.+.+..+..|+..|+-||-+||++|||+||||.+|||++.+|++||+|||+++.--.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 99999999999998777664 5589999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
....+.++||||.|+|||++...+|+.++|.||+|++||||+.|++||.+.+.
T Consensus 503 ---------------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 503 ---------------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred ---------------------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 11234678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 981 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 981 (1002)
.+.++.|......+|.. +|.++.++.+.+|.+.|.+|+... ++-++|..||||+.++|..++..+.+...-|..+.
T Consensus 556 ~elF~aI~ehnvsyPKs--lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~ 632 (683)
T KOG0696|consen 556 DELFQAIMEHNVSYPKS--LSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKC 632 (683)
T ss_pred HHHHHHHHHccCcCccc--ccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCcccc
Confidence 99999999999888875 689999999999999999999875 34578999999999999999555444445566543
No 94
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-41 Score=375.46 Aligned_cols=260 Identities=25% Similarity=0.460 Sum_probs=236.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe-EEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH-VCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~l 746 (1002)
++.|.+++++|+|+||.+++++++.+++.|++|.+.-.....+.. ....+|..+++++.|||||.+.+.|..++. +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r-~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER-RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh-HHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 568999999999999999999999999999999998765544433 467889999999999999999999998877 999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+||+||+|.+.++++.+..++++.+..|+.||+.||.|||+++|+|||||+.|||++.++.|||+|||+|+.+..+.
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 9999999999999998877889999999999999999999999999999999999999999999999999998765331
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
....+++|||.||+||.+.+.+|+.++|||||||++|||++-+.+|.+.+-...
T Consensus 161 --------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L 214 (426)
T KOG0589|consen 161 --------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL 214 (426)
T ss_pred --------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH
Confidence 134578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.+|.... -.|.+..++.+++.+|+.||+.+|..||+ +.+||.+|.+..
T Consensus 215 i~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPs----a~~LL~~P~l~~ 263 (426)
T KOG0589|consen 215 ILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPS----ALELLRRPHLLR 263 (426)
T ss_pred HHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCC----HHHHhhChhhhh
Confidence 99998876 34455568999999999999999999999 999999998875
No 95
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.7e-40 Score=371.18 Aligned_cols=262 Identities=24% Similarity=0.389 Sum_probs=219.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++...+.++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 45679999999999999999999999999999999987542 3345567889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 156 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-
Confidence 999999999999999764 4589999999999999999999986 699999999999999999999999999854311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 157 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ----------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0112357999999999999999999999999999999999999999766554
Q ss_pred HHHHHHH----------------------------------------------hCCCCCCCCCCCCHHHHHHHHHccccC
Q 001869 905 KTFANIL----------------------------------------------HKDLKFPSSTPTSLHAKQLMYRLLHRD 938 (1002)
Q Consensus 905 ~~~~~i~----------------------------------------------~~~~~~~~~~~~s~~~~~Ll~~~L~~d 938 (1002)
+....+. ....+......++.++++||.+||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~ 288 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN 288 (331)
T ss_pred HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC
Confidence 3322111 111111111236788999999999999
Q ss_pred cCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 939 PKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 939 P~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
|++||| +.+|++||||+.....
T Consensus 289 P~~Rpt----~~ell~h~~~~~~~~~ 310 (331)
T cd06649 289 PAERAD----LKMLMNHTFIKRSEVE 310 (331)
T ss_pred cccCCC----HHHHhcChHHhhcccc
Confidence 999999 9999999999875443
No 96
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=371.79 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=221.0
Q ss_pred ccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
...+.+....+++++.||+|.||.||++.+.. ...+|+|.++...+ ....+.+|+++|++|+|++||++++++..
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~ 272 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTK 272 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEec
Confidence 34567788899999999999999999999944 34799999987533 23567799999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
++.+|||||||+.|+|.++|+...+..+...++..++.|||+||+||+++++|||||...||||++++.+||+|||+|+.
T Consensus 273 ~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 273 QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccc
Confidence 88999999999999999999986677899999999999999999999999999999999999999999999999999984
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
...+... .+..---...|.|||++....++.+|||||||++||||+| |+.||.
T Consensus 353 ~~d~~Y~--------------------------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~ 406 (468)
T KOG0197|consen 353 IGDDEYT--------------------------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP 406 (468)
T ss_pred cCCCcee--------------------------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC
Confidence 3322110 1111123457999999999999999999999999999997 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+.+..+.+..+.+ ...+|.+..|+.++.+++..||+.+|++||||..
T Consensus 407 ~msn~ev~~~le~-GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 407 GMSNEEVLELLER-GYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred CCCHHHHHHHHhc-cCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 9999988876655 4577778889999999999999999999999653
No 97
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=375.88 Aligned_cols=261 Identities=27% Similarity=0.440 Sum_probs=228.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|.++..||.|+||.||+|.++.++...|-|++... .......+.-||+||..++||+||++++.|...+.+||+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 5788999999999999999999999988999987643 4566788889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.||-...++-.- +..|++.++.-+++|+|.||.|||+++|||||||..|||++-+|.++|+|||.+....
T Consensus 109 EFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~------ 181 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK------ 181 (1187)
T ss_pred eecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch------
Confidence 999888887776543 4569999999999999999999999999999999999999999999999999985421
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc-----cCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-----~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
......++++|||+|||||+. ...+|++++||||||++|.+|..+.+|-..-++
T Consensus 182 ---------------------~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp 240 (1187)
T KOG0579|consen 182 ---------------------STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP 240 (1187)
T ss_pred ---------------------hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch
Confidence 011235678999999999987 456899999999999999999999999999999
Q ss_pred HHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 904 QKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 904 ~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
...+.+|.....+ +..+...+..+.|||.+||.+||..||+ +.+||+||||++++-+
T Consensus 241 MRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~----aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 241 MRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP----AAQLLKHPFVQNAPSN 298 (1187)
T ss_pred HHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCC----HHHHhhCcccccCCcc
Confidence 9888888876543 4445567889999999999999999999 9999999999976544
No 98
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.4e-39 Score=361.30 Aligned_cols=278 Identities=43% Similarity=0.767 Sum_probs=240.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||++.+..+++.+|+|++.............+.+|++++++++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36999999999999999999999999999999998765445556678889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999999999775 46899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+......
T Consensus 155 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 208 (290)
T cd05580 155 --------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE 208 (290)
T ss_pred --------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 123468999999999988888899999999999999999999998888777777
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
.+......++.. .+..++++|.+||..||.+|++.. +.++++++||||+.++|..+.....+....|...
T Consensus 209 ~~~~~~~~~~~~--~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (290)
T cd05580 209 KILEGKVRFPSF--FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVK 279 (290)
T ss_pred HHhcCCccCCcc--CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCCC
Confidence 777666655543 588999999999999999999332 3499999999999999999865555555555553
No 99
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1e-39 Score=361.72 Aligned_cols=274 Identities=34% Similarity=0.600 Sum_probs=226.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|++|+.+++.+...+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 37788999999999999999999999999999876544444445567789999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.|++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-----
Confidence 999999999987654556999999999999999999999999999999999999999999999999988542210
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH---HH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ---KT 906 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~---~~ 906 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.... ..
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~ 212 (285)
T cd05630 156 -----------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 212 (285)
T ss_pred -----------------------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH
Confidence 0112346899999999999988999999999999999999999999865432 22
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
...+... ........++.++.+|+.+||+.||.+|||+. ..++++++||||+.++|..++....+
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 278 (285)
T cd05630 213 VERLVKE-VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLE 278 (285)
T ss_pred HHhhhhh-hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCC
Confidence 2222221 11112234678899999999999999999843 23789999999999999988664433
No 100
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.6e-39 Score=360.05 Aligned_cols=280 Identities=34% Similarity=0.575 Sum_probs=230.6
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|+..+.||.|+||.||++.+..+++.||+|++.............+.+|+.+++.++|+||+.+++++..++..|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 37788999999999999999999999999999876544334444567789999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG----- 155 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-----
Confidence 999999998887654456999999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~ 212 (285)
T cd05632 156 -----------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE 212 (285)
T ss_pred -----------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011234689999999999988899999999999999999999999988765444333
Q ss_pred HHhCCC--CCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 910 ILHKDL--KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 910 i~~~~~--~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+..... ........+..+.+|+.+||+.||.+||++.+ .+.++++|+||+..+|+.+.........+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05632 213 VDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVP 283 (285)
T ss_pred HHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCC
Confidence 322111 11122346788999999999999999999764 488999999999999998755544433333
No 101
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.1e-40 Score=371.29 Aligned_cols=263 Identities=25% Similarity=0.401 Sum_probs=211.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----CeE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~~ 744 (1002)
+|++.+.||+|+||.||+|.+..++..||||.+.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5899999999999999999999999999999987532 2233445788999999999999999999988543 358
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||| +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 57899988764 45899999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. ........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 157 ~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~ 212 (338)
T cd07859 157 TP------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 212 (338)
T ss_pred cC------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 00 0011123579999999999866 678889999999999999999999998766
Q ss_pred hHHHHHHHHh--------------------------CCCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 903 RQKTFANILH--------------------------KDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~--------------------------~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
....+..+.. ...+.+ .....+..+.+||.+||+.||++||| +++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~e~l 288 (338)
T cd07859 213 VVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT----AEEAL 288 (338)
T ss_pred hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC----HHHHh
Confidence 5433222111 000100 11245678899999999999999999 99999
Q ss_pred cCCCcCCCChh
Q 001869 954 KHPFFKGVNWA 964 (1002)
Q Consensus 954 ~Hp~f~~~~~~ 964 (1002)
+||||+++...
T Consensus 289 ~hp~f~~~~~~ 299 (338)
T cd07859 289 ADPYFKGLAKV 299 (338)
T ss_pred cCchhhhcCcc
Confidence 99999987664
No 102
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=345.17 Aligned_cols=277 Identities=37% Similarity=0.729 Sum_probs=242.9
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (1002)
.+.+.+++|.++++||+|+|..|.++++++|.+.||+|++++..+.+.+...-.+.|..+..+- +||++|-++.+|+++
T Consensus 244 ~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 244 SQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred ccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 3557789999999999999999999999999999999999999888888888888888888776 799999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+++|.||++||+|--.++++ ..++++.+++|...|+.||.|||++|||+||||.+|+|++..|++||.|+|+++..
T Consensus 324 srlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred ceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcC
Confidence 9999999999999998888775 45999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC-
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG- 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~- 900 (1002)
..+...+.++||||.|.|||++.+..|++.+|.|+||++++||+.|+.||.-
T Consensus 402 ---------------------------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 402 ---------------------------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred ---------------------------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 1123456789999999999999999999999999999999999999999941
Q ss_pred -------CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccC
Q 001869 901 -------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 901 -------~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
.+.-..++-|+...+..|.. +|-.+..+|+..|.+||.+|+... .++.++..|+||+.++|..++..+
T Consensus 455 gm~n~d~ntedylfqvilekqiriprs--lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~ 531 (593)
T KOG0695|consen 455 GMDNPDMNTEDYLFQVILEKQIRIPRS--LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQ 531 (593)
T ss_pred cCCCcccchhHHHHHHHhhhcccccce--eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcc
Confidence 22233455667777777765 455677899999999999999876 368999999999999999995544
No 103
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.8e-39 Score=360.16 Aligned_cols=256 Identities=26% Similarity=0.439 Sum_probs=210.2
Q ss_pred CCcccccccccCCcEEEEEEEEcC-CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCcceEEEEEE-----
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ----- 739 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~----- 739 (1002)
++|++++.||+|+||.||+|.+.. +++.||+|.++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 479999999999999999999854 4788999998754322 22233455677777665 6999999999885
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
....+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 3457899999994 699999977655668999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.
T Consensus 159 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 159 IYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eccCC----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 43211 11234568999999999988889999999999999999999999999
Q ss_pred CCChHHHHHHHHhCCC-----CCCC--------------------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 900 GKTRQKTFANILHKDL-----KFPS--------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~-----~~~~--------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+.+..+.+..+..... .++. ...++..+++||.+||+.||++||| +.++|+
T Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~ 286 (290)
T cd07862 211 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALS 286 (290)
T ss_pred CCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC----HHHHhc
Confidence 9888777777654210 0000 1235678899999999999999999 999999
Q ss_pred CCCc
Q 001869 955 HPFF 958 (1002)
Q Consensus 955 Hp~f 958 (1002)
||||
T Consensus 287 hp~f 290 (290)
T cd07862 287 HPYF 290 (290)
T ss_pred CCCC
Confidence 9998
No 104
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-39 Score=375.84 Aligned_cols=254 Identities=24% Similarity=0.365 Sum_probs=207.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+...+|++++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+++.++||||++++++|......|
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 456789999999999999999999999999999996432 34678999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|||++ +++|..++... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|.......
T Consensus 160 lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999999 57898888764 458999999999999999999999999999999999999999999999999985421100
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC---
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--- 902 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~--- 902 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 237 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~ 290 (391)
T PHA03212 237 --------------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLD 290 (391)
T ss_pred --------------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence 011224579999999999999999999999999999999999998875432
Q ss_pred ----hHHHHHHHHhC--------------------------CCCCCC-------CCCCCHHHHHHHHHccccCcCCCCCC
Q 001869 903 ----RQKTFANILHK--------------------------DLKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 903 ----~~~~~~~i~~~--------------------------~~~~~~-------~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
....+..++.. ....+. ....+.++.+||.+||+.||.+|||
T Consensus 291 ~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpt- 369 (391)
T PHA03212 291 GDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPS- 369 (391)
T ss_pred ccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCC-
Confidence 11112212110 000000 0123557889999999999999999
Q ss_pred hhcHHHHHcCCCcCCC
Q 001869 946 HEGANEIKKHPFFKGV 961 (1002)
Q Consensus 946 ~~~a~elL~Hp~f~~~ 961 (1002)
++++|+||||+.+
T Consensus 370 ---a~elL~hp~f~~~ 382 (391)
T PHA03212 370 ---AEALLDFAAFQDI 382 (391)
T ss_pred ---HHHHhcChhhccC
Confidence 9999999999874
No 105
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.3e-39 Score=358.38 Aligned_cols=302 Identities=38% Similarity=0.670 Sum_probs=245.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||.|+||.||++.+..+++.|++|.+.............+.+|+.+++.++||||+++++++..++.+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36899999999999999999999999999999988664434455667889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999985421110000
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.... .. .............|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 159 ~~~~---------~~---~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 159 LYEG---------HI---EKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred cccc---------cc---ccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 0000 00 00000011123568899999999988889999999999999999999999999888888777
Q ss_pred HHHhCCCCCCCCC-CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCcccccc
Q 001869 909 NILHKDLKFPSST-PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 987 (1002)
Q Consensus 909 ~i~~~~~~~~~~~-~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 987 (1002)
.+.......+... .++.++.+||.+||+.||++||++. .+.++++||||...+|+....... ..+|.+..-.+..|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~-~~~~ll~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 303 (305)
T cd05609 227 QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG-GAFEVKQHRFFLGLDWNGLLRQKA--EFIPQLESEDDTSY 303 (305)
T ss_pred HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCcc-CHHHHHhCccccCCCHHHHhhcCC--CCCCCCCCcccccc
Confidence 7777665554432 4688899999999999999999853 378999999999999998765443 35677766555555
No 106
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.8e-39 Score=365.23 Aligned_cols=259 Identities=24% Similarity=0.400 Sum_probs=216.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||.|+||.||++.+..++..+|+|++.... .......+.+|+.+++.++||||++++++|...+.+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 45679999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
+||||+.+++|.+++... ..+++..+..++.||+.||.|||++ +|+|+||||+|||++.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~- 156 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (333)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh-
Confidence 999999999999999764 4589999999999999999999985 799999999999999999999999999854311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred ----------------------------hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 0112346899999999999988999999999999999999999999765543
Q ss_pred HHHHHH--------------------------------------------HhCCCCCCCCCCCCHHHHHHHHHccccCcC
Q 001869 905 KTFANI--------------------------------------------LHKDLKFPSSTPTSLHAKQLMYRLLHRDPK 940 (1002)
Q Consensus 905 ~~~~~i--------------------------------------------~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~ 940 (1002)
.....+ .....+.......+.++++||.+||++||+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~ 288 (333)
T cd06650 209 ELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPA 288 (333)
T ss_pred HHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcc
Confidence 322111 111111111123567899999999999999
Q ss_pred CCCCChhcHHHHHcCCCcCCC
Q 001869 941 SRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 941 ~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+||| +.++++||||+..
T Consensus 289 ~Rpt----~~ell~h~~~~~~ 305 (333)
T cd06650 289 ERAD----LKQLMVHAFIKRS 305 (333)
T ss_pred cCcC----HHHHhhCHHHhcC
Confidence 9999 9999999999864
No 107
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3e-39 Score=369.23 Aligned_cols=256 Identities=27% Similarity=0.422 Sum_probs=209.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
....+|+.++.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+++.++|+||+++++++...+.+|
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQ 148 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEE
Confidence 44678999999999999999999999999999999986542 3344567889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|... ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 149 lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~- 221 (353)
T PLN00034 149 VLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT- 221 (353)
T ss_pred EEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc-
Confidence 99999999998653 23567888899999999999999999999999999999999999999999998643211
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
........||+.|+|||++.. ...+.++|||||||++|+|++|+.||..
T Consensus 222 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 275 (353)
T PLN00034 222 --------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV 275 (353)
T ss_pred --------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 011223579999999999743 2345689999999999999999999974
Q ss_pred CChH---HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 901 KTRQ---KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 901 ~~~~---~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.... .....+.. .........++.++++||.+||+.||++||+ +.++++||||.+.
T Consensus 276 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt----~~ell~hp~~~~~ 334 (353)
T PLN00034 276 GRQGDWASLMCAICM-SQPPEAPATASREFRHFISCCLQREPAKRWS----AMQLLQHPFILRA 334 (353)
T ss_pred CCCccHHHHHHHHhc-cCCCCCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccccC
Confidence 3322 12222221 1122223457889999999999999999999 9999999999985
No 108
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.7e-39 Score=371.13 Aligned_cols=261 Identities=27% Similarity=0.416 Sum_probs=214.6
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (1002)
+|++++.||+|+||.||++.+..+++.||||.+... .........+.+|+.+++.++||||+++++++...+ .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478899999999999999999999999999998653 223345567889999999999999999999998776 89
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+. ++|..++... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 99999994 6888887653 45999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. ........+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 210 (372)
T cd07853 157 E--------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP 210 (372)
T ss_pred c--------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH
Confidence 0 0111234689999999999874 478899999999999999999999998877
Q ss_pred HHHHHHHHhC-----------------------CCCCC-------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 904 QKTFANILHK-----------------------DLKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~~-----------------------~~~~~-------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+..+... ....+ .....+.++.+||.+||+.||.+||| +.+++
T Consensus 211 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l 286 (372)
T cd07853 211 IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRIS----AADAL 286 (372)
T ss_pred HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcC----HHHHh
Confidence 6655544321 11111 11235778999999999999999999 99999
Q ss_pred cCCCcCCCChh
Q 001869 954 KHPFFKGVNWA 964 (1002)
Q Consensus 954 ~Hp~f~~~~~~ 964 (1002)
+||||++..+.
T Consensus 287 ~hp~~~~~~~~ 297 (372)
T cd07853 287 AHPYLDEGRLR 297 (372)
T ss_pred cCHhhCCCcch
Confidence 99999986543
No 109
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-40 Score=351.89 Aligned_cols=252 Identities=27% Similarity=0.486 Sum_probs=211.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC---C--eE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK---T--HV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~--~~ 744 (1002)
.|.-.+.+|.|+||.||.+...+++..+|||.+-.+. ..-.+|+.+|+.++|||||++..+|... + +.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 5888899999999999999999999999999875432 1234599999999999999999988632 2 45
Q ss_pred EEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-CcEEEEeccCCccc
Q 001869 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 821 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~ 821 (1002)
.+||||| .-+|..+++. ..+..++.-.++.|..||++||+|||+.||+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 98 nlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 6899999 7799998874 123568999999999999999999999999999999999999976 99999999999765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... ....++..|..|+|||.+.|. .|+.+.||||.||++.||+-|++.|.|
T Consensus 177 ~~~----------------------------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 177 VKG----------------------------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred ccC----------------------------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 422 223467789999999999875 688899999999999999999999999
Q ss_pred CChHHHHHHHHhC-----------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 901 KTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 901 ~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.+..+++..|.+- ...+|. ....++++.+|+.++|.++|.+|.+ +.+++
T Consensus 229 ~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~----~~~~l 304 (364)
T KOG0658|consen 229 DSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS----ALEAL 304 (364)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC----HHHHh
Confidence 9988888777541 111121 1346789999999999999999999 99999
Q ss_pred cCCCcCCC
Q 001869 954 KHPFFKGV 961 (1002)
Q Consensus 954 ~Hp~f~~~ 961 (1002)
.||||..+
T Consensus 305 ~h~fFdel 312 (364)
T KOG0658|consen 305 AHPFFDEL 312 (364)
T ss_pred cchhhHHh
Confidence 99999874
No 110
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-42 Score=349.10 Aligned_cols=257 Identities=26% Similarity=0.421 Sum_probs=225.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-|.++.+||+|+||.||++.++++|..+|||.+... .....+..|+.||.++++|+||++|+.|.....+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 488999999999999999999999999999988654 356788899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
||..|++.+.++.+ ++.|++..+..+++..++||+|||...-||||||..|||++.+|+.||+|||.|-.+
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL-------- 179 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQL-------- 179 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchh--------
Confidence 99999999998754 577999999999999999999999999999999999999999999999999998432
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
++.....+++.|||.|||||++..-.|+.++||||||++..||..|++||.+..+...+-.
T Consensus 180 -------------------TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM 240 (502)
T KOG0574|consen 180 -------------------TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM 240 (502)
T ss_pred -------------------hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe
Confidence 3334456788999999999999999999999999999999999999999988776544433
Q ss_pred HHhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 910 ILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 910 i~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
|-... ..|..+...|.++.+|+++||-++|++|-| |-+|++|||+++.+-
T Consensus 241 IPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~T----A~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 241 IPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKT----ALRLCEHTFIKNAPG 291 (502)
T ss_pred ccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHH----HHHHhhhhhhcCCCc
Confidence 33322 233444456889999999999999999999 999999999998543
No 111
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-40 Score=361.35 Aligned_cols=260 Identities=26% Similarity=0.433 Sum_probs=213.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
++...|+++++||+||.+.||++...+ ...||+|.+... ..+......+.+|+.+|.+| +|.+|++|++|-..++++
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 566789999999999999999999844 455666655432 34677788999999999999 699999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||- ..+|..+|+... ..++.-.++.|..|+|.|+.++|++||||.||||.|+|+. .|.+||+|||+|..+..+
T Consensus 436 YmvmE~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred EEEeecc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 9999987 889999998753 3455569999999999999999999999999999999999 689999999999765433
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-----------CCChhhHHHHHHHHHHHHc
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-----------~~~~sDIwSlGvil~ellt 893 (1002)
.. +-...+.+||+.||+||.+.... .+.++||||||||||+|+.
T Consensus 513 TT-------------------------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY 567 (677)
T KOG0596|consen 513 TT-------------------------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY 567 (677)
T ss_pred cc-------------------------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence 22 12345679999999999996543 3468999999999999999
Q ss_pred CCCCCCCCC-hHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 894 GYTPFRGKT-RQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 894 G~~Pf~~~~-~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
|++||.... ....+..|..- .+.||..+... ++.++++.||.+||.+||+ +.+||+|||++.
T Consensus 568 gktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~-~li~~mK~CL~rdPkkR~s----i~eLLqhpFl~~ 632 (677)
T KOG0596|consen 568 GKTPFGQIINQIAKLHAITDPNHEIEFPDIPEND-ELIDVMKCCLARDPKKRWS----IPELLQHPFLQI 632 (677)
T ss_pred cCCchHHHHHHHHHHHhhcCCCccccccCCCCch-HHHHHHHHHHhcCcccCCC----cHHHhcCccccc
Confidence 999997643 33444444443 34666654332 3999999999999999999 999999999997
No 112
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.6e-39 Score=377.34 Aligned_cols=256 Identities=26% Similarity=0.419 Sum_probs=207.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
...|++++.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 468999999999999999999999999999999886431 2234699999999999999999887432
Q ss_pred --CeEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-cEEEEecc
Q 001869 742 --THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFD 816 (1002)
Q Consensus 742 --~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-~vkL~DFG 816 (1002)
..+++||||++ ++|.+++.. .....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus 138 ~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 25789999995 577777653 2345699999999999999999999999999999999999999664 79999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCC
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~ 895 (1002)
+|...... ......+||+.|+|||++.+. .++.++|||||||++|+|++|.
T Consensus 217 la~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 268 (440)
T PTZ00036 217 SAKNLLAG----------------------------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY 268 (440)
T ss_pred cchhccCC----------------------------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 98643211 111235789999999998764 6889999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhC-----------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 896 TPFRGKTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
+||.+.+..+.+..++.. .+.++. ....+.++++||.+||++||.+|||
T Consensus 269 ~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t---- 344 (440)
T PTZ00036 269 PIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN---- 344 (440)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC----
Confidence 999998777666655431 111111 1135678999999999999999999
Q ss_pred HHHHHcCCCcCCCCh
Q 001869 949 ANEIKKHPFFKGVNW 963 (1002)
Q Consensus 949 a~elL~Hp~f~~~~~ 963 (1002)
+.++|+||||..+..
T Consensus 345 a~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 345 PIEALADPFFDDLRD 359 (440)
T ss_pred HHHHhCChhHHhhhc
Confidence 999999999987543
No 113
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=365.17 Aligned_cols=254 Identities=26% Similarity=0.379 Sum_probs=231.9
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|.-++.||.|+||.||-|++..+...||||.+...-.........+..|+..|+++.|||++.+.++|-.....|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 57888999999999999999999999999999987666667788899999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|| -|+-.|++... .+++.+-.+..|+.+.+.||+|||+++.||||||..|||+++.|.|||+|||.|....
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------- 177 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------- 177 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-------
Confidence 99 77888888654 4669999999999999999999999999999999999999999999999999985532
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
+..+++|||+|||||++.. +.|+-++||||||++..||...++|+...+....
T Consensus 178 ------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA 233 (948)
T KOG0577|consen 178 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 233 (948)
T ss_pred ------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH
Confidence 3467899999999999854 5688899999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+..|.+...+.......|..+.+|+..||++-|.+||| .+++|.|+|...
T Consensus 234 LYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRpt----se~ll~H~fv~R 283 (948)
T KOG0577|consen 234 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPT----SEELLKHRFVLR 283 (948)
T ss_pred HHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCc----HHHHhhcchhcc
Confidence 99998887776666678899999999999999999999 999999999875
No 114
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.9e-39 Score=365.81 Aligned_cols=255 Identities=25% Similarity=0.483 Sum_probs=208.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 579999999999999999999999999999999987642 2334456778899999999999999999998644
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+. ++|...+.. .++...+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++...
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 35799999995 567666643 3889999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 174 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 174 CTN----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccC----------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 110 0112346899999999999999999999999999999999999999887
Q ss_pred ChHHHHHHHHh----------------------CCCCCC--------------C----CCCCCHHHHHHHHHccccCcCC
Q 001869 902 TRQKTFANILH----------------------KDLKFP--------------S----STPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~----------------------~~~~~~--------------~----~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+....+..+.. ....++ . ....+..+++||.+||+.||.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 305 (359)
T cd07876 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDK 305 (359)
T ss_pred CHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCccc
Confidence 65443332221 111111 0 0123567899999999999999
Q ss_pred CCCChhcHHHHHcCCCcCC
Q 001869 942 RLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~ 960 (1002)
||| +.++|+||||..
T Consensus 306 R~t----~~e~l~hp~~~~ 320 (359)
T cd07876 306 RIS----VDEALRHPYITV 320 (359)
T ss_pred CCC----HHHHhcCchhhh
Confidence 999 999999999985
No 115
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.8e-39 Score=358.38 Aligned_cols=260 Identities=23% Similarity=0.417 Sum_probs=214.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.+|+|.++.... ......+.+|+.+++.++||||+++++++..++..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 5689999999999999999999999999999999875432 22234567899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 83 FEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred EeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 99995 5888887654 3458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 159 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 213 (309)
T cd07872 159 -------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE 213 (309)
T ss_pred -------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 11123467899999999865 4578899999999999999999999988776555
Q ss_pred HHHHHhC-------------------CCCCC---------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHK-------------------DLKFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~-------------------~~~~~---------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+... ...++ ....++.++++||.+||+.||.+||| +.++++||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~ 289 (309)
T cd07872 214 LHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRIS----AEEAMKHAYF 289 (309)
T ss_pred HHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCC----HHHHhcChhh
Confidence 4444321 01111 11246778999999999999999999 9999999999
Q ss_pred CCCC
Q 001869 959 KGVN 962 (1002)
Q Consensus 959 ~~~~ 962 (1002)
+.+.
T Consensus 290 ~~~~ 293 (309)
T cd07872 290 RSLG 293 (309)
T ss_pred hhcc
Confidence 9853
No 116
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-40 Score=338.48 Aligned_cols=265 Identities=30% Similarity=0.482 Sum_probs=223.9
Q ss_pred cccc-cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 001869 671 FRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 671 y~i~-~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
|++. ..||+|+|+.|--|....+|..||||++.+. ......++.+|++++... +|+||++++++|+++..+|+||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 4443 5689999999999999999999999999876 456678899999999988 6999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---cEEEEeccCCcccCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g---~vkL~DFG~a~~~~~~~ 825 (1002)
|.|.||+|...++++ +.+++..+..+.++|+.||.|||.+||.||||||+|||..+.. -||||||.++.-+....
T Consensus 156 EKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred ecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 999999999999875 5699999999999999999999999999999999999998654 48999999974322111
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... ........+.+|+..|||||+.. ...|+.++|.||||+|||-|++|++||.|
T Consensus 234 ~~s--------------------pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 234 DCS--------------------PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CCC--------------------CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 100 11112234678999999999972 35688899999999999999999999976
Q ss_pred C---------------ChHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 901 K---------------TRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 901 ~---------------~~~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
. -....+..|..+.+.||+ +..+|.++++|+..+|..|+.+|.+ +.++++|||++.+-.
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rls----a~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLS----AAQVLNHPWVQRCAP 369 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhh----hhhccCCccccccch
Confidence 3 224667788889888886 4678999999999999999999999 999999999998754
Q ss_pred h
Q 001869 964 A 964 (1002)
Q Consensus 964 ~ 964 (1002)
+
T Consensus 370 e 370 (463)
T KOG0607|consen 370 E 370 (463)
T ss_pred h
Confidence 4
No 117
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-38 Score=365.03 Aligned_cols=255 Identities=25% Similarity=0.460 Sum_probs=211.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 578999999999999999999999999999999987643 2334456778899999999999999999987543
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+. ++|...+.. .++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 36799999995 577777753 3889999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 177 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 177 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCC----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 211 0112346899999999999999999999999999999999999999988
Q ss_pred ChHHHHHHHHhCCC----------------------C--------------CCC----CCCCCHHHHHHHHHccccCcCC
Q 001869 902 TRQKTFANILHKDL----------------------K--------------FPS----STPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~----------------------~--------------~~~----~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+....+..++..-. . ++. ....+..+++||.+||+.||.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~ 308 (364)
T cd07875 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308 (364)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCccc
Confidence 77666655543100 0 000 0112457899999999999999
Q ss_pred CCCChhcHHHHHcCCCcCC
Q 001869 942 RLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~ 960 (1002)
||| +.++|+||||..
T Consensus 309 R~t----~~e~L~hp~~~~ 323 (364)
T cd07875 309 RIS----VDEALQHPYINV 323 (364)
T ss_pred CCC----HHHHhcCccccc
Confidence 999 999999999985
No 118
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1e-38 Score=353.76 Aligned_cols=255 Identities=28% Similarity=0.461 Sum_probs=207.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCcceEEEEEEe-----C
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQT-----K 741 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~-----~ 741 (1002)
+|++++.||+|+||.||+|.+..+++.||+|.++..... ......+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 589999999999999999999999999999998764221 22223445677776655 79999999998864 3
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 56899999996 58998887655556899999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.
T Consensus 159 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 159 SCQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cCc----------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 211 0112346899999999999888999999999999999999999999887
Q ss_pred ChHHHHHHHHhCC-----CCCC--------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 902 TRQKTFANILHKD-----LKFP--------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 902 ~~~~~~~~i~~~~-----~~~~--------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
.....+.++.... ..++ ....++..+.+||.+||++||.+||| +.+++.||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~~~l~hp 286 (288)
T cd07863 211 SEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS----AFRALQHP 286 (288)
T ss_pred CHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC----HHHHhcCC
Confidence 7766665554310 0000 01235677899999999999999999 99999999
Q ss_pred Cc
Q 001869 957 FF 958 (1002)
Q Consensus 957 ~f 958 (1002)
||
T Consensus 287 ~f 288 (288)
T cd07863 287 FF 288 (288)
T ss_pred CC
Confidence 98
No 119
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.5e-38 Score=363.88 Aligned_cols=256 Identities=25% Similarity=0.465 Sum_probs=209.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 579999999999999999999999999999999987642 2334456777899999999999999999998643
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||++ ++|...+.. .++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 35799999995 567777653 3889999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 170 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 170 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred CCc----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 211 0112357899999999999999999999999999999999999999887
Q ss_pred ChHHHHHHHHhC----------------------CCC-----CC-------------CCCCCCHHHHHHHHHccccCcCC
Q 001869 902 TRQKTFANILHK----------------------DLK-----FP-------------SSTPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~~----------------------~~~-----~~-------------~~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+....+..++.. ... ++ .....+..+++||.+||+.||.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 301 (355)
T cd07874 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301 (355)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchh
Confidence 765544333221 000 00 00113457899999999999999
Q ss_pred CCCChhcHHHHHcCCCcCCC
Q 001869 942 RLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
||| +.++|+||||...
T Consensus 302 Rps----~~ell~hp~~~~~ 317 (355)
T cd07874 302 RIS----VDEALQHPYINVW 317 (355)
T ss_pred cCC----HHHHhcCcchhcc
Confidence 999 9999999999853
No 120
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1e-38 Score=378.98 Aligned_cols=265 Identities=28% Similarity=0.416 Sum_probs=225.3
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (1002)
..++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.++..++|+||++++..+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 45799999999999999999999999999999999976533 3445667888999999999999999988775432
Q ss_pred ----eEEEEEecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEecc
Q 001869 743 ----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 743 ----~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
.+++||||+++|+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 478999999999999998643 23468999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCC
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
+++....... .......+||+.|+|||++.+..++.++|||||||++|+|++|+.
T Consensus 189 ls~~~~~~~~-------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~ 243 (496)
T PTZ00283 189 FSKMYAATVS-------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKR 243 (496)
T ss_pred cCeecccccc-------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 9865421100 011234679999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
||.+.+..+.+..++..... +....++.++.+|+.+||+.||.+||+ +.++++|||++..-
T Consensus 244 Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs----~~ell~~p~~~~~~ 304 (496)
T PTZ00283 244 PFDGENMEEVMHKTLAGRYD-PLPPSISPEMQEIVTALLSSDPKRRPS----SSKLLNMPICKLFI 304 (496)
T ss_pred CCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccChhhCcC----HHHHHhCHHHHHhh
Confidence 99998888877777765443 233457889999999999999999999 99999999998753
No 121
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=334.79 Aligned_cols=253 Identities=27% Similarity=0.436 Sum_probs=216.1
Q ss_pred cCCcccc-cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHH-hCCCCCcceEEEEEEe----C
Q 001869 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD-MLDHPFVPALYASFQT----K 741 (1002)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~-~l~hpnIv~l~~~~~~----~ 741 (1002)
.++|.+- ++||-|-.|.|-.|.++.|+..+|+|++... ....+|+++-- .-.|||||.++++|.+ .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4677765 5699999999999999999999999987532 34556777643 3479999999999874 3
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---CCcEEEEeccCC
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~vkL~DFG~a 818 (1002)
..+.+|||.|+||.|+..++.++...+++..+..|++||+.|+.|||+.+|.||||||+|+|++. |..+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 56789999999999999999988888999999999999999999999999999999999999985 457999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
+.... .....+.|-||+|.|||++....|+..+|+||+||++|-|+||.+||
T Consensus 212 K~t~~----------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 212 KETQE----------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred cccCC----------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 65321 11223568899999999999999999999999999999999999999
Q ss_pred CCCCh----HHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 899 RGKTR----QKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 899 ~~~~~----~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.... ..+..+|..+.+.||. +...|..++++|+++|..+|.+|+| +.+++.|||+.+
T Consensus 264 YS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT----I~~~m~hpwi~~ 327 (400)
T KOG0604|consen 264 YSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT----IEEVMDHPWINQ 327 (400)
T ss_pred cccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhee----HHHhhcCchhcc
Confidence 76433 3455667777666664 5678999999999999999999999 999999999997
No 122
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=376.64 Aligned_cols=260 Identities=25% Similarity=0.399 Sum_probs=223.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCC-CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..|.+.+.||+|+||.||+|.+..+ +..+|+|.+... .......+..|+.+++.++||||+++++++...+.+|+|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 4599999999999999999999877 788999976433 344456677899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
|||++||+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999999987642 23468999999999999999999999999999999999999999999999999986542110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+
T Consensus 224 ~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~ 278 (478)
T PTZ00267 224 S-------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE 278 (478)
T ss_pred c-------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0 012235679999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+..++.+... +....++.++++||.+||..||.+||+ +.+++.|+|++.+
T Consensus 279 ~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps----~~~~l~~~~~~~~ 329 (478)
T PTZ00267 279 IMQQVLYGKYD-PFPCPVSSGMKALLDPLLSKNPALRPT----TQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHhCCCC-CCCccCCHHHHHHHHHHhccChhhCcC----HHHHHhCHHHHHH
Confidence 88877766543 223457889999999999999999999 9999999998753
No 123
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=8.2e-39 Score=364.13 Aligned_cols=255 Identities=27% Similarity=0.431 Sum_probs=210.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||.|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 468999999999999999999999999999999987642 2223445677899999999999999999987543
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...|++++++ +++|.++++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 4579999999 8899888764 35999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CC------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 21 1123578999999999877 5678899999999999999999999988
Q ss_pred CChHHHHHHHHhCCC-----------------------CCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 901 KTRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~-----------------------~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+..... ..+. ....++.+.+||.+||+.||.+||| +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s----~~e 294 (343)
T cd07878 219 NDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRIS----ASE 294 (343)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCC----HHH
Confidence 766555544432100 0000 1124567889999999999999999 999
Q ss_pred HHcCCCcCCC
Q 001869 952 IKKHPFFKGV 961 (1002)
Q Consensus 952 lL~Hp~f~~~ 961 (1002)
+|+||||...
T Consensus 295 ll~hp~~~~~ 304 (343)
T cd07878 295 ALAHPYFSQY 304 (343)
T ss_pred HhcCcchhcc
Confidence 9999999874
No 124
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5.1e-38 Score=342.98 Aligned_cols=260 Identities=26% Similarity=0.382 Sum_probs=220.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+.|++.+.||+|++|.||.|.+..+++.||+|.+...... .......+.+|+.++++++||||+++++++...+.+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4689999999999999999999999999999998754322 12234577889999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+++++|.+++... ..++...+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999998764 4589999999999999999999999999999999999999999999999999854321100
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.........|++.|+|||++.+..++.++|||||||++|+|++|+.||...+....
T Consensus 160 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 215 (263)
T cd06625 160 ------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA 215 (263)
T ss_pred ------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH
Confidence 00011234688999999999998899999999999999999999999988777666
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+............++..+.+||.+||..+|.+||| +.++++||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 263 (263)
T cd06625 216 IFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPS----AEELLRHFFV 263 (263)
T ss_pred HHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCC----HHHHhhCCCC
Confidence 66665554443344457889999999999999999999 9999999998
No 125
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.3e-38 Score=347.89 Aligned_cols=263 Identities=35% Similarity=0.603 Sum_probs=218.6
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcH
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||+|+||.||+|.+..+++.||+|++.+...........+..|+++++.++||||+++++++...+.+|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999998765443344455667899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001869 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++.......+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~------------ 148 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG------------ 148 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC------------
Confidence 99997765456999999999999999999999999999999999999999999999999988543210
Q ss_pred hcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCC-
Q 001869 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL- 915 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~- 915 (1002)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.....
T Consensus 149 ----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05577 149 ----------------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE 212 (277)
T ss_pred ----------------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc
Confidence 011234578899999999888889999999999999999999999977544222222222111
Q ss_pred -CCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhh
Q 001869 916 -KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 916 -~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~ 967 (1002)
........+..+.++|.+||+.||.+||++.+ .+.++++||||+.++|..+.
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~ 266 (277)
T cd05577 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLE 266 (277)
T ss_pred ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhh
Confidence 11222346889999999999999999997766 69999999999999998774
No 126
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.9e-38 Score=360.30 Aligned_cols=259 Identities=24% Similarity=0.348 Sum_probs=206.9
Q ss_pred cccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (1002)
+++..++|++.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.++..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 3456679999999999999999999853 345789999987532 233456788999999999 89999999998
Q ss_pred EEe-CCeEEEEEecCCCCcHHHHHhhCC----------------------------------------------------
Q 001869 738 FQT-KTHVCLITDYCPGGELFLLLDRQP---------------------------------------------------- 764 (1002)
Q Consensus 738 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------- 764 (1002)
+.. ++.+|+||||+++|+|.+++....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 875 456899999999999999987531
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001869 765 --------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 765 --------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~---------- 229 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD---------- 229 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc----------
Confidence 12477888999999999999999999999999999999999999999999999864321100
Q ss_pred hcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCC
Q 001869 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDL 915 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 915 (1002)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+....
T Consensus 230 ---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~ 294 (338)
T cd05102 230 ---------------YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT 294 (338)
T ss_pred ---------------hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC
Confidence 011123456788999999999889999999999999999996 9999987654444444444333
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 916 KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 916 ~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.......++..+.+|+.+||+.||.+||| +.+++
T Consensus 295 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs----~~el~ 328 (338)
T cd05102 295 RMRAPENATPEIYRIMLACWQGDPKERPT----FSALV 328 (338)
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHH
Confidence 33334457889999999999999999999 55554
No 127
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6.9e-38 Score=348.09 Aligned_cols=264 Identities=26% Similarity=0.447 Sum_probs=223.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++++.||.|+||.||++.+..+++.+++|.+... .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 46799999999999999999999999999999998753 345567788899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|..++.... ..+++..+..++.||+.+|.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 88 IEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred EecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999999988876432 45899999999999999999999999999999999999999999999999987432110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
........+++.|+|||++. ...++.++|||||||++|+|++|..||...+
T Consensus 164 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 219 (292)
T cd06644 164 ------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 219 (292)
T ss_pred ------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc
Confidence 01122356889999999984 3446779999999999999999999998877
Q ss_pred hHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 903 RQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 903 ~~~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
....+.++..... .......++.++.+||.+||..||++||+ ++++++||||..++++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~~~ 280 (292)
T cd06644 220 PMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPS----AAQLLEHPFVSSVTSNRP 280 (292)
T ss_pred HHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccccccchh
Confidence 6666655554332 22233456788999999999999999999 999999999999988754
No 128
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.8e-38 Score=373.37 Aligned_cols=254 Identities=23% Similarity=0.380 Sum_probs=203.6
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC------CCcceEEEEEEe
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQT 740 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~~ 740 (1002)
..++|++++.||+|+||.||+|.+..+++.||||+++.. .........|+.+++.+.| .+++.++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 357899999999999999999999999999999998642 1223345567777776644 458889998875
Q ss_pred C-CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCC----------
Q 001869 741 K-THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG---------- 808 (1002)
Q Consensus 741 ~-~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g---------- 808 (1002)
. .++|+|||++ |++|.+++... ..+++..++.++.||+.||+|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 4 5789999999 88999988764 459999999999999999999998 5999999999999998765
Q ss_pred ------cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 809 ------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 809 ------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 329 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMW 329 (467)
T ss_pred cCCCCceEEECCCCccccCc------------------------------cccccccCCccccCcHHhhcCCCCcHHHHH
Confidence 49999999874311 112346799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC------------------------C----------------CCC
Q 001869 883 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP------------------------S----------------STP 922 (1002)
Q Consensus 883 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~----------------~~~ 922 (1002)
||||++|+|++|++||.+.+..+.+..+......+| . ...
T Consensus 330 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (467)
T PTZ00284 330 SMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVI 409 (467)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhh
Confidence 999999999999999988776554443322110000 0 001
Q ss_pred CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 923 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 923 ~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+..+.+||.+||++||.+||| ++|+|+||||...
T Consensus 410 ~~~~~~dli~~mL~~dP~~R~t----a~e~L~Hp~~~~~ 444 (467)
T PTZ00284 410 RDDLLCDLIYGLLHYDRQKRLN----ARQMTTHPYVLKY 444 (467)
T ss_pred chHHHHHHHHHhCCcChhhCCC----HHHHhcCcccccc
Confidence 2345779999999999999999 9999999999873
No 129
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.9e-38 Score=355.33 Aligned_cols=265 Identities=21% Similarity=0.352 Sum_probs=210.5
Q ss_pred cccccccC--CcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 673 PIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 673 i~~~LG~G--~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
+++.||+| +|++||++.+..+|+.||+|.+..... .......+.+|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 789999999999999999999876432 233455677899999999999999999999999999999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+..........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~-- 158 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL-- 158 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc--
Confidence 999999999976544568999999999999999999999999999999999999999999999998653321100000
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
...........++..|+|||++.+ ..++.++|||||||++|+|++|..||..........
T Consensus 159 ------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 220 (327)
T cd08227 159 ------------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 220 (327)
T ss_pred ------------------cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH
Confidence 000001122357788999999976 458889999999999999999999998755544333
Q ss_pred HHHhCCCCC--------------------------------------------CCCCCCCHHHHHHHHHccccCcCCCCC
Q 001869 909 NILHKDLKF--------------------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 909 ~i~~~~~~~--------------------------------------------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
.......+. +....+++.+.+||.+||+.||.+|||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 300 (327)
T cd08227 221 EKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPS 300 (327)
T ss_pred HHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCC
Confidence 333221110 001124668899999999999999999
Q ss_pred ChhcHHHHHcCCCcCCCC
Q 001869 945 SHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 945 ~~~~a~elL~Hp~f~~~~ 962 (1002)
++++++||||+.++
T Consensus 301 ----~~ell~~p~f~~~~ 314 (327)
T cd08227 301 ----ASTLLNHSFFKQIK 314 (327)
T ss_pred ----HHHHhcChhhhhcc
Confidence 99999999998764
No 130
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.9e-38 Score=342.04 Aligned_cols=258 Identities=41% Similarity=0.746 Sum_probs=221.6
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcH
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||.|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++.+|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999989999999999876554555667889999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001869 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++.+. ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------- 147 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------- 147 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------
Confidence 9999764 448999999999999999999999999999999999999999999999999985432110
Q ss_pred hcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHHHhCC
Q 001869 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQKTFANILHKD 914 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~--~~~~~~~i~~~~ 914 (1002)
......|++.|++||.+.+..++.++|+||||+++|+|++|..||.... ....+..+....
T Consensus 148 -----------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 210 (262)
T cd05572 148 -----------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN 210 (262)
T ss_pred -----------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC
Confidence 1123468899999999988888999999999999999999999998776 666666666433
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChh
Q 001869 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~ 964 (1002)
.........+.++.++|.+||+.||.+||++. ..++++++||||++.+|+
T Consensus 211 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 211 GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 23233333478999999999999999999953 458999999999999886
No 131
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=6.5e-38 Score=349.97 Aligned_cols=261 Identities=25% Similarity=0.417 Sum_probs=214.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++++.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 35689999999999999999999999999999999875422 2223456789999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+. ++|..++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 158 (301)
T cd07873 82 VFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT- 158 (301)
T ss_pred EEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-
Confidence 999995 6898888654 3458999999999999999999999999999999999999999999999999985422110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+
T Consensus 159 --------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~ 212 (301)
T cd07873 159 --------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE 212 (301)
T ss_pred --------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 111234578999999998654 47789999999999999999999998877665
Q ss_pred HHHHHHhC-------------------CCCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 906 TFANILHK-------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 906 ~~~~i~~~-------------------~~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
....+... ...++. ...++..+++||.+||+.||.+||| ++++|+|||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~eil~h~~ 288 (301)
T cd07873 213 QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRIS----AEEAMKHPY 288 (301)
T ss_pred HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcC----HHHHhcCcc
Confidence 55443321 001111 1246778999999999999999999 999999999
Q ss_pred cCCCC
Q 001869 958 FKGVN 962 (1002)
Q Consensus 958 f~~~~ 962 (1002)
|+.+.
T Consensus 289 f~~~~ 293 (301)
T cd07873 289 FHCLG 293 (301)
T ss_pred ccccc
Confidence 98864
No 132
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.6e-37 Score=337.76 Aligned_cols=256 Identities=25% Similarity=0.445 Sum_probs=218.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lV~ 748 (1002)
+|++++.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++|+|++++++.+.. ...+|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 58999999999999999999999999999999875422 33445667889999999999999999998864 45689999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.......+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--- 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--- 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC---
Confidence 99999999999987555668999999999999999999999999999999999999999999999999985532110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus 157 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~ 212 (257)
T cd08223 157 ------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY 212 (257)
T ss_pred ------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 11223568999999999999989999999999999999999999998877766666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+..+.... .....+..+.+|+.+||+.||.+||+ +.++++||||
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 257 (257)
T cd08223 213 RIIEGKLPP-MPKDYSPELGELIATMLSKRPEKRPS----VKSILRQPYI 257 (257)
T ss_pred HHHhcCCCC-CccccCHHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence 665554422 22357889999999999999999999 9999999997
No 133
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.5e-37 Score=337.69 Aligned_cols=256 Identities=28% Similarity=0.444 Sum_probs=221.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|.+.+.||+|++|.||+|.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 47888999999999999999999999999999875432 34456778899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|++|++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~----- 154 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN----- 154 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc-----
Confidence 999999999998765567999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......
T Consensus 155 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 212 (256)
T cd08529 155 ----------------------TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK 212 (256)
T ss_pred ----------------------cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0111234688999999999988899999999999999999999999998887777777
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+......... ..++..+.++|.+||+.+|++||+ +.++++|||+
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 256 (256)
T cd08529 213 IIRGVFPPVS-QMYSQQLAQLIDQCLTKDYRQRPD----TFQLLRNPSL 256 (256)
T ss_pred HHcCCCCCCc-cccCHHHHHHHHHHccCCcccCcC----HHHHhhCCCC
Confidence 7665433222 256788999999999999999999 9999999995
No 134
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.8e-38 Score=382.04 Aligned_cols=264 Identities=25% Similarity=0.388 Sum_probs=218.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTH 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~ 743 (1002)
...++|++++.||.|+||.||+|.+..++..+|+|++..... .......+..|+.+++.|+|||||+++++|.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 456799999999999999999999999999999999876533 33455678899999999999999999998854 467
Q ss_pred EEEEEecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-------CcccCCCCCCCEEEcc--------
Q 001869 744 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-------GIIYRDLKPENVLLQG-------- 806 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-------gIiHrDLKP~NILl~~-------- 806 (1002)
+||||||+.+++|.+++... ....+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 99999999999999998752 234699999999999999999999985 4999999999999964
Q ss_pred ---------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CCC
Q 001869 807 ---------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGH 875 (1002)
Q Consensus 807 ---------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~ 875 (1002)
.+.+||+|||++...... ......+||+.|+|||++.+ ..+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------s~~~s~vGTp~YmAPEvL~ge~~~~ 220 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------SMAHSCVGTPYYWSPELLLHETKSY 220 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc----------------------------ccccccCCCccccCHHHHhccCCCC
Confidence 235899999998543211 01123579999999999864 457
Q ss_pred CChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 876 TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 876 ~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+.++|||||||+||+|++|..||...+....+...+.....++. ...+.++.+||..||..+|.+||+ +.++|.|
T Consensus 221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPS----a~QlL~h 295 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI-KGKSKELNILIKNLLNLSAKERPS----ALQCLGY 295 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc-CCCCHHHHHHHHHHhcCChhHCcC----HHHHhcc
Confidence 88999999999999999999999877665555555554443332 346889999999999999999999 9999999
Q ss_pred CCcCCCCh
Q 001869 956 PFFKGVNW 963 (1002)
Q Consensus 956 p~f~~~~~ 963 (1002)
|||+.+..
T Consensus 296 ~~ik~i~~ 303 (1021)
T PTZ00266 296 QIIKNVGP 303 (1021)
T ss_pred HHHhhcCC
Confidence 99987643
No 135
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7e-38 Score=362.84 Aligned_cols=261 Identities=25% Similarity=0.400 Sum_probs=212.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEc--CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
...+|++++.||.|+||.||+|... .+++.||+|.+... ....+|+.+++.++||||+++++++...+.+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 3468999999999999999999764 35688999987643 2345799999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||++ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 162 ~lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 162 CMVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred EEEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9999999 57888888543 56999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~- 903 (1002)
.. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...
T Consensus 239 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~ 293 (392)
T PHA03207 239 PD-------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVK 293 (392)
T ss_pred cc-------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCC
Confidence 10 0112246799999999999999999999999999999999999999976432
Q ss_pred --HHHHHHHHhC----CC-------------------------CCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001869 904 --QKTFANILHK----DL-------------------------KFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 904 --~~~~~~i~~~----~~-------------------------~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
...+..++.. .. ..+. ....+.++++||.+||..||.+||| +
T Consensus 294 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rps----a 369 (392)
T PHA03207 294 SSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPS----A 369 (392)
T ss_pred CcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCC----H
Confidence 1222222210 00 0110 0124567889999999999999999 9
Q ss_pred HHHHcCCCcCCCChhhhh
Q 001869 950 NEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 950 ~elL~Hp~f~~~~~~~~~ 967 (1002)
.++|+||||+..+|+.++
T Consensus 370 ~e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 370 QDILSLPLFTKEPINLLN 387 (392)
T ss_pred HHHhhCchhhccchhhhc
Confidence 999999999998888664
No 136
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.2e-37 Score=342.02 Aligned_cols=255 Identities=27% Similarity=0.410 Sum_probs=213.5
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEe------C
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT------K 741 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~------~ 741 (1002)
+.|++.+.||.|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ +||||+++++++.. .
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 57899999999999999999999999999999986532 2335677899999988 79999999999875 2
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|+||||+.+++|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 46899999999999999998755567899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
... ........|++.|+|||++. +..++.++|||||||++|+|++|..
T Consensus 162 ~~~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~ 214 (272)
T cd06637 162 DRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 214 (272)
T ss_pred ccc---------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 210 01123457899999999986 3457789999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
||...........+............++..+.+||.+||..||.+||| +.++++||||
T Consensus 215 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~~ 272 (272)
T cd06637 215 PLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPT----TEQLMKHPFI 272 (272)
T ss_pred CccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCC----HHHHhhCCCC
Confidence 998766655555444433333333456789999999999999999999 9999999998
No 137
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.3e-37 Score=343.61 Aligned_cols=260 Identities=27% Similarity=0.456 Sum_probs=221.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||.|+||.||++.+..++..+|+|.+... .......+..|+.+++.++||||+++++++..+..+|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 5799999999999999999999889999999998643 4455667888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~---- 156 (280)
T cd06611 82 EFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST---- 156 (280)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc----
Confidence 999999999998754 245999999999999999999999999999999999999999999999999987542211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
........|++.|+|||++. ...++.++|||||||++|+|++|..||.+.+.
T Consensus 157 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~ 213 (280)
T cd06611 157 -----------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP 213 (280)
T ss_pred -----------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH
Confidence 01122456899999999975 34467799999999999999999999988877
Q ss_pred HHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 904 QKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 904 ~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
...+..+.....+ +.....++.++.+||.+||+.+|.+||+ +.++++||||+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~~~ 270 (280)
T cd06611 214 MRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPT----AAELLKHPFVSDQSD 270 (280)
T ss_pred HHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcC----HHHHhcChhhcccch
Confidence 7766666654332 2233457889999999999999999999 999999999998643
No 138
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.2e-37 Score=341.88 Aligned_cols=259 Identities=36% Similarity=0.658 Sum_probs=205.9
Q ss_pred ccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh---CCCCCcceEEEEEEeCCeEEEEEecCC
Q 001869 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM---LDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~---l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
.||+|+||.||++.+..+++.+|+|++.+.............++..+++. .+||||+.+++++...+..|+||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999999999999999976544333323334445444443 479999999999999999999999999
Q ss_pred CCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcc
Q 001869 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
+++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-------- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--------
Confidence 99999998764 45999999999999999999999999999999999999999999999999998532210
Q ss_pred hhhhhcccCCCCCccccccCcccccccCCCccccccccc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--HHHHHH
Q 001869 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTFAN 909 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--~~~~~~ 909 (1002)
......|++.|+|||.+. +..++.++|||||||++|+|++|..||..... ......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~ 209 (279)
T cd05633 151 ---------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (279)
T ss_pred ---------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH
Confidence 011236899999999986 45678899999999999999999999975432 122222
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhh
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~ 966 (1002)
.. ..........++.++.++|.+||+.||.+|++.. ..+.++++||||++++|...
T Consensus 210 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~ 266 (279)
T cd05633 210 MT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQV 266 (279)
T ss_pred Hh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHH
Confidence 11 1112222234688999999999999999999421 23899999999999999977
No 139
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.2e-37 Score=341.78 Aligned_cols=252 Identities=26% Similarity=0.425 Sum_probs=210.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 36889999999999999999999999999999987542 2334467888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|..+. .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 79 EFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred ecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 999999996542 3788999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-----
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----- 903 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~----- 903 (1002)
.....+|++.|+|||++.+..++.++|+|||||++|+|++|..||.....
T Consensus 149 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~ 203 (279)
T cd06619 149 -------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL 203 (279)
T ss_pred -------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc
Confidence 11235789999999999998899999999999999999999999965321
Q ss_pred --HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 904 --QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 904 --~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
......+.............+.++.+|+.+||+.||.+||+ ++++++||||...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~eil~~~~~~~~ 259 (279)
T cd06619 204 MPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPA----PENLMDHPFIVQY 259 (279)
T ss_pred chHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCC----HHHHhcCcccccc
Confidence 12222222222222222346788999999999999999999 9999999999865
No 140
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.9e-38 Score=343.94 Aligned_cols=254 Identities=39% Similarity=0.636 Sum_probs=211.4
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|++++.||+|+||.||++.+..+++.||+|++...... ........+|+.+++.++||||+++++++......++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-EEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-HHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-ccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 78899999999999999999999999999999876322 22223345599999999999999999999999999999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+.+++|.+++... ..++...+..++.||+.||++||++||+|+||||+||+++.++.++|+|||.+....
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-------- 149 (260)
T PF00069_consen 80 CPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-------- 149 (260)
T ss_dssp ETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--------
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence 9999999999843 458999999999999999999999999999999999999999999999999985421
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCccccccccc-CCCCCChhhHHHHHHHHHHHHcCCCCCCCCC---hHHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQKT 906 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~~sDIwSlGvil~elltG~~Pf~~~~---~~~~ 906 (1002)
..........+++.|+|||++. +..++.++||||||+++|+|++|..||.... ....
T Consensus 150 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~ 210 (260)
T PF00069_consen 150 -------------------ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI 210 (260)
T ss_dssp -------------------STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH
T ss_pred -------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 0112233457899999999998 8888999999999999999999999998873 3333
Q ss_pred HHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+............ ....+..+.++|.+||+.||++||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~l~~~~~~ 260 (260)
T PF00069_consen 211 IEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPS----AEELLKHPWF 260 (260)
T ss_dssp HHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTT----HHHHHTSGGG
T ss_pred hhhcccccccccccccchhHHHHHHHHHHHccCChhHCcC----HHHHhcCCCC
Confidence 3333332211111 1112478999999999999999999 9999999998
No 141
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-37 Score=340.81 Aligned_cols=258 Identities=30% Similarity=0.470 Sum_probs=221.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.++||||+++++++.+...+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47899999999999999999999999999999987542 2344567788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++... .+++..++.++.||+.||.|||+++|+|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--- 152 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc---
Confidence 999999999998763 68999999999999999999999999999999999999999999999999986543110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus 153 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~ 208 (274)
T cd06609 153 ------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF 208 (274)
T ss_pred ------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 11223568899999999998889999999999999999999999998877666555
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.+.....+......++..+.++|.+||..+|++||| ++++++||||+...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt----~~~il~~~~~~~~~ 258 (274)
T cd06609 209 LIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPS----AKELLKHKFIKKAK 258 (274)
T ss_pred HhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcC----HHHHhhChhhcCCC
Confidence 555443332222236788999999999999999999 99999999999854
No 142
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.6e-37 Score=338.71 Aligned_cols=256 Identities=44% Similarity=0.767 Sum_probs=215.9
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHH-HhCCCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
+.||.|+||.||+|.+..+++.||+|++.+...........+..|..++ ..++|+||+++++++...+.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5789999999999999999999999998765333333334445555544 455899999999999999999999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 9999999764 4589999999999999999999999999999999999999999999999998743210
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+....+..+...
T Consensus 150 ---------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 208 (260)
T cd05611 150 ---------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208 (260)
T ss_pred ---------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 12346888999999998888889999999999999999999999988887777777666
Q ss_pred CCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 914 DLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 914 ~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
...++.. ..++..+.++|.+||+.||++||++. .+++++.||||+.++|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~-~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 209 RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGAN-GYQEIKSHPFFKSINWD 260 (260)
T ss_pred ccCCCCcccccCCHHHHHHHHHHccCCHHHccCCC-cHHHHHcChHhhcCCCC
Confidence 5544432 34688999999999999999999732 26899999999999984
No 143
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.9e-37 Score=341.19 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=217.5
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-|++++.||.|+||.||++.+..++..+++|.+... .......+.+|+++++.++||||+++++++...+..|+|||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 378899999999999999999999999999998643 33456678889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|..++... ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~----- 156 (282)
T cd06643 83 FCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT----- 156 (282)
T ss_pred ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-----
Confidence 99999999887653 245899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
........|++.|+|||++. +..++.++|||||||++|+|++|.+||...+..
T Consensus 157 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 214 (282)
T cd06643 157 ----------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM 214 (282)
T ss_pred ----------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH
Confidence 01122356899999999984 345677999999999999999999999888777
Q ss_pred HHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 905 KTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.....+..... ..+....++..+.+||.+||+.||.+||+ +.++++||||+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 268 (282)
T cd06643 215 RVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWT----TTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCCCEecc
Confidence 66666655432 22333456789999999999999999999 9999999999863
No 144
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=321.80 Aligned_cols=258 Identities=28% Similarity=0.442 Sum_probs=219.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
..++.+.+..||.|+.|+|++++.+.+|...|||.+.+. .+....++++..+.++... ++|+||+++++|..+..++
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH
Confidence 345677888999999999999999999999999999875 3666778888888877665 5999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|.||.| +..+..++++- .+++++.-+-.+..-+++||.||-.+ ||||||+||+|||++..|.+||||||++-.+..
T Consensus 168 IcMelM-s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd- 244 (391)
T KOG0983|consen 168 ICMELM-STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD- 244 (391)
T ss_pred HHHHHH-HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec-
Confidence 999999 55555555543 46699999999999999999999765 899999999999999999999999999855432
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCC-
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRG- 900 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~- 900 (1002)
+.......|-+.|||||.+. ...|+.++||||||++++||.||+.||.+
T Consensus 245 ---------------------------SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c 297 (391)
T KOG0983|consen 245 ---------------------------SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC 297 (391)
T ss_pred ---------------------------ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC
Confidence 12233457899999999984 45688899999999999999999999988
Q ss_pred CChHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 901 KTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
....+.+.++++... .++.....|+.+++|+..||++|+.+||. ..+||+|||+..
T Consensus 298 ~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~----Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 298 KTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK----YNKLLEHPFIKR 354 (391)
T ss_pred CccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc----hHHHhcCcceee
Confidence 456778888887544 34455568999999999999999999999 999999999986
No 145
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.5e-37 Score=346.52 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=213.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++..++.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36999999999999999999999999999999987542 3344567888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+++++|.+++... ..+++..+..++.||+.||.|||+ .+|+|+||||+|||++.++.+||+|||++.....
T Consensus 79 ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 152 (308)
T cd06615 79 EHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 152 (308)
T ss_pred eccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc----
Confidence 999999999999764 558999999999999999999998 5999999999999999999999999998743210
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+.....
T Consensus 153 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~ 207 (308)
T cd06615 153 -------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE 207 (308)
T ss_pred -------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH
Confidence 0112457899999999998888899999999999999999999999765543322
Q ss_pred HHHHhCC------------------------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 908 ANILHKD------------------------------------LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 908 ~~i~~~~------------------------------------~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
..+.... .+......++.++++|+.+||..||++||| +.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ 283 (308)
T cd06615 208 AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD----LKE 283 (308)
T ss_pred HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcC----HHH
Confidence 2121100 000001125678999999999999999999 999
Q ss_pred HHcCCCcCC
Q 001869 952 IKKHPFFKG 960 (1002)
Q Consensus 952 lL~Hp~f~~ 960 (1002)
+++||||.+
T Consensus 284 ll~~~~~~~ 292 (308)
T cd06615 284 LTKHPFIKR 292 (308)
T ss_pred HhcChhhhh
Confidence 999999986
No 146
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.8e-37 Score=343.00 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=209.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||+|++|.||+|.+..++..||+|.++.... .......+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 48899999999999999999999999999999875422 22334567789999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 750 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+. ++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++.+|.+||+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 154 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP---- 154 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC----
Confidence 996 68888886533 256899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
........+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.......
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~ 211 (285)
T cd07861 155 -----------------------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL 211 (285)
T ss_pred -----------------------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 0111233678999999998654 4688999999999999999999999887655444
Q ss_pred HHHHhCCC------------------CC---------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHKDL------------------KF---------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~------------------~~---------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+..... .+ .....++.++.+||.+||+.||.+||| +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~~ll~~~~~ 285 (285)
T cd07861 212 FRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS----AKKALNHPYF 285 (285)
T ss_pred HHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC----HHHHhcCCCC
Confidence 33321100 00 012346788999999999999999999 9999999998
No 147
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-37 Score=363.51 Aligned_cols=254 Identities=27% Similarity=0.385 Sum_probs=205.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
....|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+.++++++|+||+++++++..++..|+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 35689999999999999999999999999999996432 235679999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
|||++ .++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 238 v~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 238 VLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99999 578988886542 3599999999999999999999999999999999999999999999999999865321100
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh---
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--- 903 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--- 903 (1002)
........||+.|+|||++.+..++.++|||||||++|||++|..|+.....
T Consensus 316 -------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~ 370 (461)
T PHA03211 316 -------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE 370 (461)
T ss_pred -------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc
Confidence 0111245799999999999999999999999999999999998766543211
Q ss_pred ----HHHHHHHHh-CCCC---CC-----------------------------CCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 904 ----QKTFANILH-KDLK---FP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 904 ----~~~~~~i~~-~~~~---~~-----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
...+.+++. .... ++ .....+.++.+||.+||+.||.+|||
T Consensus 371 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPs-- 448 (461)
T PHA03211 371 RRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPS-- 448 (461)
T ss_pred cCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcC--
Confidence 112222222 1110 10 11134567899999999999999999
Q ss_pred hcHHHHHcCCCcCC
Q 001869 947 EGANEIKKHPFFKG 960 (1002)
Q Consensus 947 ~~a~elL~Hp~f~~ 960 (1002)
+.|+|+||||+.
T Consensus 449 --a~elL~hp~f~~ 460 (461)
T PHA03211 449 --AAELLRLPLFQS 460 (461)
T ss_pred --HHHHhhCcccCC
Confidence 999999999975
No 148
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.7e-37 Score=338.51 Aligned_cols=265 Identities=45% Similarity=0.827 Sum_probs=225.7
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcH
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||.|+||.||++.+..+++.+++|.+.............+.+|+.+++.++||||+++++.+..++..|+||||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999989999999999766444455667888999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001869 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++.... .+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------- 151 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL------- 151 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-------
Confidence 99997643 589999999999999999999999999999999999999999999999999854321111000
Q ss_pred hcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001869 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (1002)
...........+++.|+|||.+....++.++|+||||+++|+|++|..||........+..+..+...
T Consensus 152 ------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 152 ------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred ------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 00011223456888999999998888889999999999999999999999988888888787776666
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 917 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 917 ~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
++.....+..+.+|+.+||+.+|.+|||+. .+.++|+||||+.++|
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~-~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAK-SIEEIKNHPFFKGIDW 265 (265)
T ss_pred CCccccCCHHHHHHHHHHhcCCHhhcCCCc-cHHHHhcCccccCCCC
Confidence 666555688999999999999999999921 1389999999999988
No 149
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.9e-37 Score=341.40 Aligned_cols=271 Identities=18% Similarity=0.267 Sum_probs=218.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcC-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+..++|++.+.||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4567899999999999999999997642 35689999876432 2333456778999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEE
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
..+..|+||||+.+|+|.+++.... ...++...+..++.||+.||.|||++||+||||||+||+++.++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999999997532 12356678889999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 L~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el 214 (288)
T cd05061 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214 (288)
T ss_pred ECcCCcccccccccc-------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence 999999854321100 0111223457789999999988899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc--CCCcCCCCh
Q 001869 892 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFKGVNW 963 (1002)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~--Hp~f~~~~~ 963 (1002)
++ |..||.+....+.+..+..... .+....++..+.+++.+||+.||.+|||+.+.++.+.+ ||||.+++|
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 215 TSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 98 8999988877776666654432 22223457889999999999999999995555555554 999999998
No 150
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.2e-37 Score=339.10 Aligned_cols=254 Identities=26% Similarity=0.438 Sum_probs=213.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++.+.||+|+||.||+|.+..+++.||+|.++.. .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE---PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 45899999999999999999999999999999998754 223345677899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... +.+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06645 85 MEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--- 159 (267)
T ss_pred EeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc---
Confidence 9999999999998764 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
........|++.|+|||++. ...++.++|+|||||++|+|++|..||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~ 215 (267)
T cd06645 160 ------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch
Confidence 01112346899999999974 455778999999999999999999999776554
Q ss_pred HHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 905 KTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
.............+. ...++..+.+||.+||..+|++||+ +.++++|||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~ll~~~~ 267 (267)
T cd06645 216 RALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPT----AEKLLQHPF 267 (267)
T ss_pred hhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcC----HHHHhcCCC
Confidence 444444333332221 2346778999999999999999999 999999998
No 151
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=301.26 Aligned_cols=259 Identities=24% Similarity=0.426 Sum_probs=219.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|...++||+|.||+||++++..++..||+|.++.+. .+........+|+.+++.++|.|||+++++......+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 46888899999999999999999999999999998653 23344567788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||| .-+|..++..- ++.+..+.++.++.|++.||.|+|++++.||||||.|+||+.+|.+||+|||+++.++..
T Consensus 81 e~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip---- 154 (292)
T KOG0662|consen 81 EFC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP---- 154 (292)
T ss_pred HHh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc----
Confidence 999 77888888754 456999999999999999999999999999999999999999999999999999765421
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CCChhhHHHHHHHHHHHH-cCCCCCCCCChHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEML-YGYTPFRGKTRQKT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~sDIwSlGvil~ell-tG~~Pf~~~~~~~~ 906 (1002)
.+-....+-|.+|.+|.++.+.. |+...|+||.|||+.|+. .|.+.|.+.+..++
T Consensus 155 -----------------------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq 211 (292)
T KOG0662|consen 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_pred -----------------------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence 12233457899999999998864 677999999999999999 59999999999888
Q ss_pred HHHHHhC-----CCCCCCC----------------------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 907 FANILHK-----DLKFPSS----------------------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 907 ~~~i~~~-----~~~~~~~----------------------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+.+|... .-.||.. +.++...++|++++|..+|.+|++ ++.+++||||.
T Consensus 212 lkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris----aeaalqhpyf~ 287 (292)
T KOG0662|consen 212 LKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS----AEAALQHPYFS 287 (292)
T ss_pred HHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC----HHHHhcCcccc
Confidence 8888652 1112211 223335689999999999999999 99999999998
Q ss_pred CC
Q 001869 960 GV 961 (1002)
Q Consensus 960 ~~ 961 (1002)
..
T Consensus 288 d~ 289 (292)
T KOG0662|consen 288 DF 289 (292)
T ss_pred cc
Confidence 63
No 152
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-37 Score=342.21 Aligned_cols=244 Identities=18% Similarity=0.204 Sum_probs=207.4
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCeEEEEEec
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDY 750 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~lV~E~ 750 (1002)
..||+|+++.||++.. +|+.||||.++............+.+|+.+|++++||||+++++++.+ ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6789999999999998 789999999987544344446778899999999999999999999876 4578999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
+++|+|.+++... ..++......++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----- 176 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----- 176 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc-----
Confidence 9999999999764 4588899999999999999999985 9999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.....|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+
T Consensus 177 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 177 -------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY 231 (283)
T ss_pred -------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 112468899999999976 67889999999999999999999999998888888
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
..+......++....++..+++|+.+||+.||++|||+.+.+..+
T Consensus 232 ~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l 276 (283)
T PHA02988 232 DLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276 (283)
T ss_pred HHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 777766555554446789999999999999999999954444443
No 153
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=6.2e-37 Score=335.39 Aligned_cols=261 Identities=28% Similarity=0.419 Sum_probs=216.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh------hHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------NKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
+|.+.+.||.|+||.||+|.+..+++.+|+|.+........ .....+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47788999999999999999988999999998876433221 233567889999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||++++++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999999764 4589999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.... ...........|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.
T Consensus 159 ~~~~---------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 217 (267)
T cd06628 159 NSLS---------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217 (267)
T ss_pred cccc---------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH
Confidence 1100 0001112235688999999999988889999999999999999999999988766
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+..+..... .......+..+.++|.+||+.||.+||+ +.++++||||
T Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 267 (267)
T cd06628 218 LQAIFKIGENAS-PEIPSNISSEAIDFLEKTFEIDHNKRPT----AAELLKHPFL 267 (267)
T ss_pred HHHHHHHhccCC-CcCCcccCHHHHHHHHHHccCCchhCcC----HHHHhhCCCC
Confidence 655555444221 1122346788999999999999999999 9999999998
No 154
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-37 Score=356.70 Aligned_cols=252 Identities=25% Similarity=0.406 Sum_probs=201.6
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
...+|++++.||+|+||.||+|.+..++..||+|+.... ....|+.+++.++||||+++++++...+..|+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 345799999999999999999999999999999975433 23458999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+ .++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 135 VLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred EEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99999 56888888654 346899999999999999999999999999999999999999999999999998532110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC-CCCCCh--
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP-FRGKTR-- 903 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P-f~~~~~-- 903 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|+++..| |.....
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~ 264 (357)
T PHA03209 211 --------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTP 264 (357)
T ss_pred --------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcH
Confidence 011235699999999999999999999999999999999975444 433111
Q ss_pred -------HHHHHHHHhC----CCCCC----------------------------CCCCCCHHHHHHHHHccccCcCCCCC
Q 001869 904 -------QKTFANILHK----DLKFP----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 904 -------~~~~~~i~~~----~~~~~----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
...+..++.. ...++ ....++.++.+||.+||+.||.+|||
T Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpt 344 (357)
T PHA03209 265 EEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPS 344 (357)
T ss_pred HHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcC
Confidence 0111111110 00111 01134556778999999999999999
Q ss_pred ChhcHHHHHcCCCcCCC
Q 001869 945 SHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 945 ~~~~a~elL~Hp~f~~~ 961 (1002)
+.++|+||||+.+
T Consensus 345 ----a~e~l~hp~f~~~ 357 (357)
T PHA03209 345 ----AEEILNYPMFAQL 357 (357)
T ss_pred ----HHHHhcCchhccC
Confidence 9999999999863
No 155
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.8e-37 Score=332.84 Aligned_cols=256 Identities=28% Similarity=0.477 Sum_probs=223.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||.|+||.||.+.+..+++.+++|.+..... .......+.+|+.++++++|+||+++++++.+.+.+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 58999999999999999999999999999999875432 33455678899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++.......+++..+..++.|++.+|+|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 9999999999987655668999999999999999999999999999999999999999999999999985432111
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+..+....
T Consensus 156 -----------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08221 156 -----------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK 212 (256)
T ss_pred -----------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 012235689999999999888888999999999999999999999998888888877
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+.... ....++.++.++|.+||+.+|.+||+ +.++++|||+
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~s----~~~ll~~~~l 256 (256)
T cd08221 213 IVQGNYTP-VVSVYSSELISLVHSLLQQDPEKRPT----ADEVLDQPLL 256 (256)
T ss_pred HHcCCCCC-CccccCHHHHHHHHHHcccCcccCCC----HHHHhhCcCC
Confidence 77665443 23557889999999999999999999 9999999996
No 156
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.2e-37 Score=340.72 Aligned_cols=256 Identities=28% Similarity=0.406 Sum_probs=213.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEE------e
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ------T 740 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~------~ 740 (1002)
.+.|++.+.||.|+||.||++.+..+++.+|+|++... ......+..|+.+++++ +|+||+++++++. .
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 36899999999999999999999999999999998643 23345677899999888 7999999999985 3
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+.+|+||||+.+++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 56889999999999999999876556689999999999999999999999999999999999999999999999998854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
.... ........|++.|+|||.+. ...++.++|||||||++|+|++|.
T Consensus 171 ~~~~---------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 171 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred hhcc---------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 3210 01122356899999999985 345778999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 896 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.||........+..+............++..+.+||.+||+.||.+||+ +.+|++||||
T Consensus 224 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~ell~~~~~ 282 (282)
T cd06636 224 PPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS----TEQLLKHPFI 282 (282)
T ss_pred CCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcC----HHHHhcCCCC
Confidence 9998776655554444433222233356889999999999999999999 9999999997
No 157
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.4e-37 Score=338.57 Aligned_cols=260 Identities=35% Similarity=0.641 Sum_probs=210.2
Q ss_pred ccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHH---HHHHhCCCCCcceEEEEEEeCCeEEEEEecCC
Q 001869 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER---EILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~---~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
.||+|+||.||++.+..+++.||+|++.+..............|. .+++...||+|+.+++++...+.+|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998865433222222233343 34445689999999999999999999999999
Q ss_pred CCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcc
Q 001869 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
|++|..++... ..+++..++.++.|++.||.|||+.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-------- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------
Confidence 99999988754 46999999999999999999999999999999999999999999999999998543210
Q ss_pred hhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC---ChHHHHH
Q 001869 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK---TRQKTFA 908 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~---~~~~~~~ 908 (1002)
......|++.|+|||++.+. .++.++||||+||++|+|++|..||.+. .......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~ 209 (278)
T cd05606 151 ---------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (278)
T ss_pred ---------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence 01234689999999998754 6788999999999999999999999775 2233222
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CChhcHHHHHcCCCcCCCChhhhhccCCC
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-----GSHEGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rp-----t~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
.+......++. .++..+.+++.+||..+|.+|| + +.++++||||+.++|+.+.....|
T Consensus 210 ~~~~~~~~~~~--~~s~~~~~li~~~l~~~p~~R~~~~~~~----~~~ll~~~~~~~~~~~~~~~~~~~ 272 (278)
T cd05606 210 MTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRG----AQEVKEHPFFRSLDWQMVFLQKYP 272 (278)
T ss_pred HhhccCCCCCC--cCCHHHHHHHHHHhhcCHHhccCCCCCC----HHHHHhCccccCCCchHhhhcccC
Confidence 33333333332 3588999999999999999999 7 999999999999999988555444
No 158
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.6e-37 Score=341.67 Aligned_cols=256 Identities=25% Similarity=0.414 Sum_probs=217.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|++++.||+|+||.||++.+..+++.+++|.+.... ......+.+|+.+++.++||||+++++.+..+...|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 58999999999999999999999999999999987543 223466788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..++...+..++.|++.||+|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 97 e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 97 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred cccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+......
T Consensus 171 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~ 226 (296)
T cd06654 171 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226 (296)
T ss_pred ------------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH
Confidence 01123468899999999988888999999999999999999999998877654444
Q ss_pred HHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 909 NILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 909 ~i~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+.... ...+....++..+.+|+.+||..||.+||+ +.++++||||...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~ 276 (296)
T cd06654 227 LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS----AKELLQHQFLKIA 276 (296)
T ss_pred HHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC----HHHHhhChhhhcc
Confidence 333322 222233446788999999999999999999 9999999999864
No 159
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-37 Score=343.29 Aligned_cols=256 Identities=25% Similarity=0.419 Sum_probs=216.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|++++.||.|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 68999999999999999999999999999999987542 233456788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..++...+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 96 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred cccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~ 225 (297)
T cd06656 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (297)
T ss_pred ------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee
Confidence 01123468899999999998888999999999999999999999998766544333
Q ss_pred HHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 909 NILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 909 ~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+... .........++..+.+|+.+||..+|.+||+ ++++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~ 275 (297)
T cd06656 226 LIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS----AKELLQHPFLKLA 275 (297)
T ss_pred eeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhccc
Confidence 22222 2222223446778999999999999999999 9999999999964
No 160
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.4e-37 Score=346.70 Aligned_cols=251 Identities=27% Similarity=0.439 Sum_probs=193.5
Q ss_pred ccccccCCcEEEEEEEEc--CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEEEEe
Q 001869 674 IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLITD 749 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~lV~E 749 (1002)
.++||+|+||.||+|.+. .+++.||+|.+.... ....+.+|+.+++.++||||+++++++.. ...+|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 367999999999999975 467899999986532 12346789999999999999999999854 567899999
Q ss_pred cCCCCcHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE----ccCCcEEEEeccCC
Q 001869 750 YCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 818 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl----~~~g~vkL~DFG~a 818 (1002)
|+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 56888887532 12358999999999999999999999999999999999999 45678999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~P 897 (1002)
........ +........||+.|+|||++.+. .++.++|||||||++|+|++|.+|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 215 (317)
T cd07868 160 RLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred eccCCCCc------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 65431100 01112345789999999999774 578899999999999999999999
Q ss_pred CCCCCh---------HHHHHHHHhCC-C----------CCC-------------------------CCCCCCHHHHHHHH
Q 001869 898 FRGKTR---------QKTFANILHKD-L----------KFP-------------------------SSTPTSLHAKQLMY 932 (1002)
Q Consensus 898 f~~~~~---------~~~~~~i~~~~-~----------~~~-------------------------~~~~~s~~~~~Ll~ 932 (1002)
|.+... ...+..+.... . ..+ .....+..+.+||.
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 295 (317)
T cd07868 216 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQ 295 (317)
T ss_pred ccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHH
Confidence 965332 11122221100 0 000 00123457889999
Q ss_pred HccccCcCCCCCChhcHHHHHcCCCc
Q 001869 933 RLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 933 ~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+||++||.+||| ++++|+||||
T Consensus 296 ~mL~~dP~~R~t----~~e~l~hp~f 317 (317)
T cd07868 296 KLLTMDPIKRIT----SEQAMQDPYF 317 (317)
T ss_pred HHhccCcccCCC----HHHHhcCCCC
Confidence 999999999999 9999999998
No 161
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.5e-37 Score=340.66 Aligned_cols=257 Identities=26% Similarity=0.436 Sum_probs=219.9
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|++++.||.|+||.||++.+..+++.|++|.+.... ......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 57999999999999999999999999999999987542 233467788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|..++.. ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 96 EYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred EecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 99999999998865 348999999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~ 225 (296)
T cd06655 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (296)
T ss_pred ------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 01123468899999999988888999999999999999999999998887765555
Q ss_pred HHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 909 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.+..... .+.....++..+.+||.+||..||.+||+ +.++++||||+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~il~~~~~~~~~ 276 (296)
T cd06655 226 LIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKLAK 276 (296)
T ss_pred HHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCC----HHHHhhChHhhhcc
Confidence 5443322 22333457888999999999999999999 99999999998753
No 162
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6e-37 Score=333.27 Aligned_cols=256 Identities=25% Similarity=0.471 Sum_probs=221.4
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 58999999999999999999999999999999875432 23345678889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---- 155 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch----
Confidence 9999999999976544568999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+.+..
T Consensus 156 -----------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08218 156 -----------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK 212 (256)
T ss_pred -----------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH
Confidence 011224588899999999988888999999999999999999999998888877777
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
++.+.... .....+..+.++|.+||+.+|.+||+ +.++++||||
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~vl~~~~~ 256 (256)
T cd08218 213 IIRGSYPP-VSSHYSYDLRNLVSQLFKRNPRDRPS----VNSILEKNFI 256 (256)
T ss_pred HhcCCCCC-CcccCCHHHHHHHHHHhhCChhhCcC----HHHHhhCcCC
Confidence 76655432 23356888999999999999999999 9999999998
No 163
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.2e-37 Score=336.82 Aligned_cols=254 Identities=25% Similarity=0.401 Sum_probs=211.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 458999999999999999999999999999999987542 23345677899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06646 85 MEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT--- 159 (267)
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc---
Confidence 9999999999998754 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
........|++.|+|||.+. ...++.++|+|||||++|+|++|..||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~ 215 (267)
T cd06646 160 ------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 01112346889999999984 344677999999999999999999999766554
Q ss_pred HHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 905 KTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
.....+....+..+. ....+..+.+||++||+.+|++||+ ++++++|+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~l~ 267 (267)
T cd06646 216 RALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPT----AERLLTHLF 267 (267)
T ss_pred hhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcC----HHHHhcCCC
Confidence 443333333332222 2346788999999999999999999 999999998
No 164
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.8e-37 Score=335.07 Aligned_cols=261 Identities=28% Similarity=0.428 Sum_probs=220.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||+|.+..++..+++|++...... .....+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 4799999999999999999999889999999998754322 25677889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+++++|.+++..... ..+++..++.++.||+.||+|||++||+|+||+|+||++++++.++|+|||++.........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999976432 56899999999999999999999999999999999999999999999999998654321110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.........|++.|+|||++... .++.++|+|||||++|+|++|+.||...+....
T Consensus 159 -----------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 215 (267)
T cd06610 159 -----------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV 215 (267)
T ss_pred -----------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh
Confidence 00112345789999999998776 788899999999999999999999988777666
Q ss_pred HHHHHhCCCC-CCCC---CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHKDLK-FPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~-~~~~---~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+.+....... ++.. ..++..+.+|+.+||..||++||+ +.+|++||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~ll~~p~~ 267 (267)
T cd06610 216 LMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT----AEELLKHKFF 267 (267)
T ss_pred HHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC----HHHHhhCCCC
Confidence 6666654322 2211 246788999999999999999999 9999999998
No 165
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=9.1e-37 Score=374.35 Aligned_cols=151 Identities=39% Similarity=0.653 Sum_probs=139.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+++|++++.||+|+||.||+|.+..+++.||||+++............+..|+.+++.++||||++++.++...+++|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999876555566667888999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
|||+.|++|.+++... ..+++..++.|+.||+.||+|||.+||+||||||+|||++.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999764 4589999999999999999999999999999999999999999999999999864
No 166
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.8e-37 Score=333.55 Aligned_cols=261 Identities=23% Similarity=0.345 Sum_probs=215.3
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccc---cChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+|++.+.||.|+||.||++.+ .++..+|+|.+..... ........+.+|+++++.++|+||+++++++.+.+.+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999987 5788999998875421 123344668889999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+++++|.+++.+. ..+++..+..++.||+.||+|||+.||+|+||+|+||++++++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999764 3589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.. ..........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 158 ~~---------------------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~ 216 (265)
T cd06631 158 HG---------------------THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA 216 (265)
T ss_pred cc---------------------cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH
Confidence 00 000112235689999999999988899999999999999999999999987766555
Q ss_pred HHHHHhCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHKDLKF-PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~-~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+....... +....++..+.+||++||..+|.+||+ +.++++||||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~ 265 (265)
T cd06631 217 MFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPS----ALQLLRHDFL 265 (265)
T ss_pred HHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 44444332222 233457889999999999999999999 9999999997
No 167
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=350.82 Aligned_cols=252 Identities=25% Similarity=0.418 Sum_probs=215.9
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.|+|..+...-+..||.|+.|.||+++. .++.||||.++. .-..+|+-|++|+||||+.+.+++....
T Consensus 118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsP 185 (904)
T KOG4721|consen 118 LWEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSP 185 (904)
T ss_pred hccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCc
Confidence 3455556666778899999999999997 567899997652 2234778899999999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|||||||..|.|+..|+.. ..++...+..|..+|+.||.|||.++|||||||.-||||+.+..|||+|||-++...
T Consensus 186 cyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 186 CYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred eeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 999999999999999999863 568899999999999999999999999999999999999999999999999886543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. ...-+++||..|||||++.+.+++.|+|||||||+||||+||..||.+-+
T Consensus 264 ~~----------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd 315 (904)
T KOG4721|consen 264 DK----------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD 315 (904)
T ss_pred hh----------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc
Confidence 11 12235899999999999999999999999999999999999999998877
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
...++--+-..-+.+|-+..++..++=||+.||+-.|.+||+ +.++|.|-=+.+
T Consensus 316 ssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPS----Frqil~HldIa~ 369 (904)
T KOG4721|consen 316 SSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPS----FRQILLHLDIAS 369 (904)
T ss_pred hheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCcc----HHHHHHHHhhcC
Confidence 665554444555666767778889999999999999999999 889999865443
No 168
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.3e-36 Score=333.08 Aligned_cols=259 Identities=26% Similarity=0.393 Sum_probs=212.3
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVC 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~ 745 (1002)
.|++.+.||+|+||.||++.+..++..|++|.+...... .......+.+|+.+++.++||||+++++++.. ...++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 689999999999999999999999999999998754321 22345678889999999999999999998875 46789
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
++|||+++++|.+++... ..++...++.++.||+.||+|||+++|+|+||||+||+++.++.+||+|||++.......
T Consensus 83 l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 999999999999999764 348999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
. .........|+..|+|||++.+..++.++|||||||++|+|++|+.||.......
T Consensus 161 ~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~ 216 (266)
T cd06651 161 M------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA 216 (266)
T ss_pred c------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH
Confidence 0 0001123458899999999998888999999999999999999999998776665
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
....+............++..+++|+ +||..+|.+||+ ++++++||||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~----~~eil~hp~~~ 265 (266)
T cd06651 217 AIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPS----AEELLRHPFAQ 265 (266)
T ss_pred HHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcC----HHHHhcCcccc
Confidence 55544433222111234577888998 577789999999 99999999996
No 169
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=9.2e-37 Score=337.39 Aligned_cols=256 Identities=27% Similarity=0.430 Sum_probs=210.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++.....+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999999999999998875421 2223345778999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|..++... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07847 80 EYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG--- 154 (286)
T ss_pred eccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc---
Confidence 999988888776543 358999999999999999999999999999999999999999999999999986532110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+..
T Consensus 155 ------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~ 210 (286)
T cd07847 155 ------------------------DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQL 210 (286)
T ss_pred ------------------------ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01123457889999999876 45788999999999999999999999887765554
Q ss_pred HHHHhC-------------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~-------------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+... ....+. ....+..+.+||.+||+.||++||+ +.+++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~~~~f 286 (286)
T cd07847 211 YLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS----CEELLEHPYF 286 (286)
T ss_pred HHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC----HHHHhcCCCC
Confidence 443221 000111 1235678899999999999999999 9999999998
No 170
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3e-37 Score=341.26 Aligned_cols=255 Identities=23% Similarity=0.422 Sum_probs=206.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||.|+||.||+|.+..+|..||+|.+..... .......+.+|+.+++.++||||+++++++.+.+.+|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 48899999999999999999999999999999875422 22233566789999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 80 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~----- 152 (284)
T cd07839 80 YCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP----- 152 (284)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC-----
Confidence 995 5888877653 345899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC-CCCChHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF-RGKTRQKTF 907 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf-~~~~~~~~~ 907 (1002)
........+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..+.+
T Consensus 153 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~ 210 (284)
T cd07839 153 ----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 210 (284)
T ss_pred ----------------------CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH
Confidence 0111234578899999998764 4688999999999999999988885 444444444
Q ss_pred HHHHhCC--------------CC---CC----------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHKD--------------LK---FP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~--------------~~---~~----------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+...- .. ++ ....++.++.+||.+||+.||.+||| ++++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~il~h~~f 284 (284)
T cd07839 211 KRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS----AEEALQHPYF 284 (284)
T ss_pred HHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCC----HHHHhcCCCC
Confidence 3332210 00 00 01235778999999999999999999 9999999998
No 171
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.9e-38 Score=351.60 Aligned_cols=261 Identities=29% Similarity=0.500 Sum_probs=233.2
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.+.....|.+++.||+|.|+.|.++.+.-++..||||++.+...... ....+.+|+++|+.|+|||||+++.+......
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 34556789999999999999999999999999999999998765444 34448899999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+.+|.+++|+.+. +.+.+...+.++.|++.|++|||+++|+|||||++|||++.+-.+||+|||++..+..
T Consensus 130 lylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred eEEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999999999886 4477799999999999999999999999999999999999999999999999966542
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.....++||++.|.|||++.+..| ++.+|+||+|++||.|++|.+||.+.+
T Consensus 208 ----------------------------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~ 259 (596)
T KOG0586|consen 208 ----------------------------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN 259 (596)
T ss_pred ----------------------------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc
Confidence 223457899999999999998776 469999999999999999999999998
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+.-...+.+++.+|.. ++.++.+||+++|-.+|.+|++ ++++..|.|....
T Consensus 260 lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~----~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 260 LKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGP----CDQIMKDRWRNDL 312 (596)
T ss_pred cccccchheeeeecccce--eechhHHHHHHhhccCccccCC----HHHhhhhcccchh
Confidence 888888888887777765 5667899999999999999999 9999999998863
No 172
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.5e-37 Score=335.73 Aligned_cols=255 Identities=38% Similarity=0.725 Sum_probs=217.6
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||+|.+..++..||+|++.+.........+.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48899999999999999999998999999999987655455567788999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.|++|..++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc----
Confidence 99999999999764 468999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--HHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTF 907 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--~~~~ 907 (1002)
......|+..|+|||++.+..++.++|+||||+++|+|++|..||...+. ...+
T Consensus 155 ------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (258)
T cd05578 155 ------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210 (258)
T ss_pred ------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 11234688899999999888889999999999999999999999987664 3333
Q ss_pred HHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~-~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..... .....+ ...+..+.++|.+||+.||.+||++. +.++++||||
T Consensus 211 ~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~~~~--~~~l~~~~~~ 258 (258)
T cd05578 211 RAKQETADVLYP--ATWSTEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258 (258)
T ss_pred HHHhccccccCc--ccCcHHHHHHHHHHccCChhHcCCcc--HHHHhcCCCC
Confidence 33333 222233 34678999999999999999999932 3999999998
No 173
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.5e-36 Score=335.63 Aligned_cols=257 Identities=30% Similarity=0.490 Sum_probs=214.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||+|.+..++..||+|++..... .......+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 58999999999999999999999999999999876532 23345678899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+ +++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 99 999999987543 5699999999999999999999999999999999999999999999999999865431110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~ 211 (286)
T cd07832 155 -----------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211 (286)
T ss_pred -----------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH
Confidence 111234689999999998654 45789999999999999999999998877766655
Q ss_pred HHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 909 NILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 909 ~i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
.++..- ..++. ....+..+.+||.+||+.||.+||+ ++++++||||.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~~l~h~~~~ 286 (286)
T cd07832 212 IVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS----AAEALRHPYFT 286 (286)
T ss_pred HHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC----HHHHhhCcCcC
Confidence 544310 01111 1234678899999999999999999 99999999995
No 174
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=345.18 Aligned_cols=257 Identities=29% Similarity=0.481 Sum_probs=221.9
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|.||+||-+.++.+|+.||||++.+-.+..+. ...+.+|+.||..++||.||.+.-.|++.+.+++|||.+ .|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 6799999999999999999999999999987665443 478899999999999999999999999999999999999 55
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC---CcEEEEeccCCcccCCCCCCCCCc
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKPQLLLPT 831 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~~~~~~~~~~~~ 831 (1002)
++.+.+-....+.|++...++++.||+.||.|||.+||+|+||||+|||+.+. ..+||||||+|+.++.+
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk------- 720 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK------- 720 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh-------
Confidence 55555555556789999999999999999999999999999999999999754 47999999999876522
Q ss_pred chhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHH
Q 001869 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 911 (1002)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~ 911 (1002)
.-..+++|||.|+|||+|.+..|+..-|+||.|+|+|--++|..||..+. ++-.+|.
T Consensus 721 ---------------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQ 777 (888)
T KOG4236|consen 721 ---------------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQ 777 (888)
T ss_pred ---------------------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHhh
Confidence 11246799999999999999999999999999999999999999997644 3445666
Q ss_pred hCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC-Chhhhh
Q 001869 912 HKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV-NWALVR 967 (1002)
Q Consensus 912 ~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~-~~~~~~ 967 (1002)
+..+-+|. +..++.++.+||..+|+..-.+|.+ +.+.|.|||+++- .|-++|
T Consensus 778 NAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRys----vdk~lsh~Wlq~yq~w~DLR 832 (888)
T KOG4236|consen 778 NAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYS----VDKSLSHPWLQDYQTWLDLR 832 (888)
T ss_pred ccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcc----hHhhccchhhhcchHHHHHH
Confidence 66555553 4568999999999999999999999 9999999999983 466663
No 175
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.8e-36 Score=329.17 Aligned_cols=255 Identities=28% Similarity=0.476 Sum_probs=219.4
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||+|+||.||+|.+..++..+|+|.+..... .......+.+|+.+++.++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 48899999999999999999999999999999876533 33446778899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-CcEEEEeccCCcccCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+++++|.+++.......+++..+..++.|++.+|+|||++||+|+||||+||+++.+ +.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK---- 155 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC----
Confidence 9999999999987555568999999999999999999999999999999999999865 46899999998653211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++||||||+++|+|++|..||.+.+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 211 (256)
T cd08220 156 ------------------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVL 211 (256)
T ss_pred ------------------------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 01123468899999999998888899999999999999999999998887776666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+...... +.....+..+.+++.+||+.+|.+||| +.++++||||
T Consensus 212 ~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~ll~~p~~ 256 (256)
T cd08220 212 KIMSGTFA-PISDRYSPDLRQLILSMLNLDPSKRPQ----LSQIMAQPIC 256 (256)
T ss_pred HHHhcCCC-CCCCCcCHHHHHHHHHHccCChhhCCC----HHHHhhCCCC
Confidence 66554332 223347889999999999999999999 9999999997
No 176
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=364.75 Aligned_cols=271 Identities=28% Similarity=0.381 Sum_probs=219.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEE-EEe---
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS-FQT--- 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~-~~~--- 740 (1002)
+...+++|.+.|.+|||+.||+|.+...|..||+|.+-. .+......+.+|+++|++|+ |+|||.+++. ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 344578889999999999999999988889999998754 37778888999999999995 9999999993 221
Q ss_pred ---CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEccCCcEEEEec
Q 001869 741 ---KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 741 ---~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
.-.++|.||||.||.|-|++..+....|++..+..|+.|+++||++||... |||||||-+||||+.+|+.|||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 135789999999999999998655556999999999999999999999998 999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc---cCCCCCChhhHHHHHHHHHHHH
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~~~~sDIwSlGvil~ell 892 (1002)
|.|+....... ...+. .. ........-|+.|+|||++ .+.+.+.|+|||+|||+||-|+
T Consensus 191 GSatt~~~~~~----~~~e~--~~------------ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLC 252 (738)
T KOG1989|consen 191 GSATTKILSPT----SAQEV--NY------------VEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLC 252 (738)
T ss_pred cccccccCCCc----cHHHH--HH------------HHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHH
Confidence 99864221110 00000 00 0011223579999999997 5678899999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH----cCCCcCCC
Q 001869 893 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK----KHPFFKGV 961 (1002)
Q Consensus 893 tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL----~Hp~f~~~ 961 (1002)
+...||.+... ..|+.+.+.+|..+.++..+++||+.||+.||.+||+.-++..++. .+.++..+
T Consensus 253 y~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~ 321 (738)
T KOG1989|consen 253 YFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDI 321 (738)
T ss_pred HhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcccc
Confidence 99999987633 3578899999999999999999999999999999999554443332 34444444
No 177
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.1e-36 Score=330.99 Aligned_cols=260 Identities=25% Similarity=0.367 Sum_probs=214.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccc--cChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 744 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~ 744 (1002)
..|++.+.||+|+||.||++.+..+++.||||.+..... ........+.+|+.+++.++||||+++++++.+ ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 479999999999999999999999999999998864321 123445678889999999999999999999876 3578
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 9999999999999998764 34889999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.. .........|+..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 215 (265)
T cd06652 160 CL------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM 215 (265)
T ss_pred cc------------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH
Confidence 00 001112346889999999998888899999999999999999999999877666
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
..+..+.............+..+.++|.+||. +|.+||+ ++++++|||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~----~~~il~~~~~~ 265 (265)
T cd06652 216 AAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPS----ADELLRHTFVH 265 (265)
T ss_pred HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCC----HHHHhcCcccC
Confidence 65555443322222233457788999999995 9999999 99999999984
No 178
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.4e-36 Score=333.03 Aligned_cols=255 Identities=18% Similarity=0.267 Sum_probs=211.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEc---CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
+...+|++.+.||+|+||.||++.+. ..+..+|+|.++... .......+.+|+.+++.++||||+++++++..++
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 44568999999999999999999875 446789999987642 2344567889999999999999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+++++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||.+....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999999997643 458999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
... ........++..|+|||.+.+..++.++|||||||++|++++ |..||.+.
T Consensus 159 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 159 SEA--------------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred ccc--------------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 100 001112345678999999999999999999999999999875 99999988
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+....+..+... ...+....++..+.+++.+||+.+|.+||+ +.+|++
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~RP~----~~~i~~ 260 (266)
T cd05064 213 SGQDVIKAVEDG-FRLPAPRNCPNLLHQLMLDCWQKERGERPR----FSQIHS 260 (266)
T ss_pred CHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCCchhCCC----HHHHHH
Confidence 877766665443 334445567889999999999999999999 555543
No 179
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.3e-37 Score=352.97 Aligned_cols=255 Identities=22% Similarity=0.336 Sum_probs=207.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCC-----eEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 739 (1002)
+..++|++.+.||+|+||.||+|.+...+ ..||+|+++... .......+.+|+.+++.+ +|+||+++++++.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 44568999999999999999999875443 579999997543 233456788899999999 8999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC-------------------------------------------------------
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------- 764 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------- 764 (1002)
..+.+|+|||||.+|+|.+++....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 9999999999999999999986421
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCc
Q 001869 765 -------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (1002)
Q Consensus 765 -------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (1002)
...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~------ 266 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS------ 266 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc------
Confidence 1247888999999999999999999999999999999999999999999999985432110
Q ss_pred chhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001869 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i 910 (1002)
.........+++.|||||++.+..++.++|||||||++|+|++ |..||........+...
T Consensus 267 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~ 327 (374)
T cd05106 267 -------------------NYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM 327 (374)
T ss_pred -------------------ceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH
Confidence 0011122345678999999998899999999999999999997 99999876655555555
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.......+.....+.++.+++.+||+.||.+|||+.+
T Consensus 328 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~ 364 (374)
T cd05106 328 VKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQ 364 (374)
T ss_pred HHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 5554444444456889999999999999999999443
No 180
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.1e-37 Score=352.16 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=209.3
Q ss_pred cccCCcccccccccCCcEEEEEEEE-----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 739 (1002)
+..++|++.+.||+|+||.||+|.+ ..++..||||+++... .......+.+|+.+++.+ +||||+++++++.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 4456899999999999999999975 3457789999987542 233456788899999999 8999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC-------------------------------------------------------
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------- 764 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------- 764 (1002)
..+..|+|||||++|+|.+++....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 9999999999999999999986432
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 765 ------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 765 ------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12477888999999999999999999999999999999999999999999999865321100
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~ 905 (1002)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus 270 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~ 324 (375)
T cd05104 270 -------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS 324 (375)
T ss_pred -------------------------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH
Confidence 011122345678999999999999999999999999999997 999998766554
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.+.+.+............+.++.+||.+||+.||++||+ +.++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 369 (375)
T cd05104 325 KFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPT----FKQIVQ 369 (375)
T ss_pred HHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcC----HHHHHH
Confidence 555555544433333446789999999999999999999 666654
No 181
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.8e-36 Score=330.32 Aligned_cols=254 Identities=28% Similarity=0.450 Sum_probs=216.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||+|.+..+++.+++|++.... ......+.+|+.+++.++||||+++++++...+.+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 57999999999999999999999999999999997542 235577889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++... ...+++..+..++.|++.||+|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---- 154 (262)
T cd06613 80 EYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT---- 154 (262)
T ss_pred eCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh----
Confidence 999999999998764 245899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
........|+..|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+...
T Consensus 155 -----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 155 -----------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred -----------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0111235688899999999776 78889999999999999999999998877766
Q ss_pred HHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 906 TFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
....+....+..+. ....+.++.+||.+||..+|..||| +.+++.|+|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~ 262 (262)
T cd06613 212 ALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT----ATKLLQHPF 262 (262)
T ss_pred HHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCC----HHHHhcCCC
Confidence 65555554332221 2335678999999999999999999 999999998
No 182
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-36 Score=335.42 Aligned_cols=258 Identities=24% Similarity=0.389 Sum_probs=214.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCC-----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
+..++|++++.||+|+||.||+|.+...+ ..+|+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34568999999999999999999986655 789999887432 33445678899999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~ 806 (1002)
....|++|||+++++|.+++..... ..++...+..++.||+.||.|||++||+|+||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 9999999999999999999975321 45888999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHH
Q 001869 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (1002)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGv 886 (1002)
++.++|+|||++........ ........+++.|+|||.+.+..++.++|||||||
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~ 214 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY-------------------------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGV 214 (283)
T ss_pred CCcEEECCCcceeecccccc-------------------------ccccCCCcccccccCHHHhccCcCchhhhHHHHHH
Confidence 99999999999854321100 01112345788999999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 887 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 887 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
++|+|++ |..||.+.+..+....+..... .+....++.++.+|+.+||+.||.+||+ +.+++++
T Consensus 215 il~el~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~l~~~c~~~~p~~Rp~----~~~i~~~ 279 (283)
T cd05048 215 VLWEIFSYGLQPYYGFSNQEVIEMIRSRQL-LPCPEDCPARVYALMIECWNEIPARRPR----FKDIHTR 279 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-CCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 9999997 9999999888777666654432 3334567899999999999999999999 7777654
No 183
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=336.69 Aligned_cols=256 Identities=25% Similarity=0.414 Sum_probs=211.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-C-C----CcceEEEEEEe
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-P----FVPALYASFQT 740 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-p----nIv~l~~~~~~ 740 (1002)
...+|.+++.+|+|.||.|-.|.+.+++..+|||+++.- ..-.....-|+++|.++. + | -+|++.++|+.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 368999999999999999999999999999999998742 122334456899999983 2 2 47888999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc--------------
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------------- 806 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-------------- 806 (1002)
.+++|||+|.+ |.+++++++.+...+++..+++.++.||+++++|||+.+++|.||||+|||+.+
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence 99999999999 889999999988899999999999999999999999999999999999999952
Q ss_pred ------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhh
Q 001869 807 ------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (1002)
Q Consensus 807 ------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sD 880 (1002)
+..|+|+|||.|.... ....+++.|..|+|||++++.+++.++|
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~------------------------------e~hs~iVsTRHYRAPEViLgLGwS~pCD 291 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDH------------------------------EHHSTIVSTRHYRAPEVILGLGWSQPCD 291 (415)
T ss_pred eeccCCCcceEEEecCCcceec------------------------------cCcceeeeccccCCchheeccCcCCccC
Confidence 2248999999985422 1224678999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCChHHHH---HHHHh------------------CCCCCCCC-------------------
Q 001869 881 WWALGILLYEMLYGYTPFRGKTRQKTF---ANILH------------------KDLKFPSS------------------- 920 (1002)
Q Consensus 881 IwSlGvil~elltG~~Pf~~~~~~~~~---~~i~~------------------~~~~~~~~------------------- 920 (1002)
|||+||||+||++|...|+..+..+.+ +.|+. +.+.|+..
T Consensus 292 vWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~ 371 (415)
T KOG0671|consen 292 VWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKY 371 (415)
T ss_pred ceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHH
Confidence 999999999999999999988776633 33322 11122210
Q ss_pred ----CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 921 ----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 921 ----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
......+.+||++||.+||.+|+| +.|+|.||||+..
T Consensus 372 ~~~~d~e~~~LfDLl~~mL~fDP~~RiT----l~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 372 MLQDDLEHVQLFDLLRRMLEFDPARRIT----LREALSHPFFARL 412 (415)
T ss_pred hccCcHHHhHHHHHHHHHHccCcccccc----HHHHhcCHHhhcC
Confidence 011225789999999999999999 9999999999974
No 184
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-36 Score=336.73 Aligned_cols=256 Identities=27% Similarity=0.454 Sum_probs=211.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|++++.||.|++|.||+|.+..+++.||||.+..... .......+.+|+.++++++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998875422 22334577889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+. ++|..++.......+++..++.++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---- 154 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---- 154 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc----
Confidence 995 689998876655678999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......+++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+......
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~ 211 (284)
T cd07860 155 -----------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 211 (284)
T ss_pred -----------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 0112235788999999987644 5789999999999999999999998876655444
Q ss_pred HHHhCCC------------------CCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 909 NILHKDL------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~------------------~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
++..... .++. ...++.+++++|.+||+.||.+||| ++++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~~~f 284 (284)
T cd07860 212 RIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS----AKAALAHPFF 284 (284)
T ss_pred HHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC----HHHHhcCCCC
Confidence 4332100 0110 1235778899999999999999999 9999999998
No 185
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.9e-36 Score=329.32 Aligned_cols=252 Identities=27% Similarity=0.491 Sum_probs=216.3
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||++.+..+++.||+|.++... .......+..|+.+++.++||||+++++++...+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4889999999999999999999999999999986532 23455677889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~----- 153 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP----- 153 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-----
Confidence 999999999987655567899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+....+..
T Consensus 154 ----------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~ 211 (255)
T cd08219 154 ----------------------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK 211 (255)
T ss_pred ----------------------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH
Confidence 0112235689999999999988899999999999999999999999998877777666
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+...... +....++..+.+||.+||+.||.+||+ +.+++.-
T Consensus 212 ~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~ 252 (255)
T cd08219 212 VCQGSYK-PLPSHYSYELRSLIKQMFKRNPRSRPS----ATTILSR 252 (255)
T ss_pred HhcCCCC-CCCcccCHHHHHHHHHHHhCCcccCCC----HHHHhhc
Confidence 6555433 222346788999999999999999999 7777753
No 186
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.8e-36 Score=329.13 Aligned_cols=253 Identities=28% Similarity=0.460 Sum_probs=215.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||++.+..+++.|++|.+.... ....+.+|+.+++.++||||+++++++.....+|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 58999999999999999999998889999999987542 2568889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+++|.+++... ...+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~---- 152 (256)
T cd06612 78 EYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT---- 152 (256)
T ss_pred ecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC----
Confidence 999999999998654 346899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
........|+..|+|||++.+..++.++|||||||++|+|++|+.||..........
T Consensus 153 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~ 209 (256)
T cd06612 153 -----------------------MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF 209 (256)
T ss_pred -----------------------ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh
Confidence 001123458889999999999889999999999999999999999998776655444
Q ss_pred HHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 909 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+..... .+.....++..+.++|.+||+.||.+||| +.++++||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~il~~~~~ 256 (256)
T cd06612 210 MIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS----AIQLLQHPFI 256 (256)
T ss_pred hhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC----HHHHhcCCCC
Confidence 3332221 12223346778999999999999999999 9999999997
No 187
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6e-38 Score=349.89 Aligned_cols=263 Identities=21% Similarity=0.298 Sum_probs=214.3
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..|.|..+...+...||+|.||+||++.+-++ ||||++.... ......+.|.+|+.++++-+|.||+-+.+++...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~-pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDD-PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccc---eEEEEEecCC-CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 45667778899999999999999999999664 9999998753 3556889999999999999999999999999988
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
.. .||+.+|+|-+|+.++.... ..|....++.|++||++||.|||.++|||||||..||++.++++|||+|||++...
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 77 99999999999999998654 55999999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.. + .+ ........|+..|||||++.. .+|++.+|||||||++|||++|.+||
T Consensus 539 ~~-------------w--~g----------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPy 593 (678)
T KOG0193|consen 539 TR-------------W--SG----------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPY 593 (678)
T ss_pred ee-------------e--cc----------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCc
Confidence 10 0 00 111223458899999999854 57888999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCC----CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 899 RGKTRQKTFANILHKDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~----~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
...+...++-.+-++ +..|+ ...++.++++|+..||.+++++||.+.+.+..|+.++
T Consensus 594 si~~~dqIifmVGrG-~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 594 SIQNRDQIIFMVGRG-YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred CCCChhheEEEeccc-ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 955544433333233 22222 2346678999999999999999999776655454443
No 188
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.5e-36 Score=346.87 Aligned_cols=255 Identities=26% Similarity=0.491 Sum_probs=209.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|.+.+.. ........+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 478999999999999999999999999999999986542 2334456677899999999999999999988643
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+ +++|.+.+... ++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred CcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 3579999999 56888887643 899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... .......|++.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 169 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 169 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CCC----------------------------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 211 0012346889999999999999999999999999999999999999877
Q ss_pred ChHHHHHHHHhCC----------------------C--------------CCCC-----CCCCCHHHHHHHHHccccCcC
Q 001869 902 TRQKTFANILHKD----------------------L--------------KFPS-----STPTSLHAKQLMYRLLHRDPK 940 (1002)
Q Consensus 902 ~~~~~~~~i~~~~----------------------~--------------~~~~-----~~~~s~~~~~Ll~~~L~~dP~ 940 (1002)
+....+..++..- . .++. ....+..+++||.+||+.||.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 300 (353)
T cd07850 221 DHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPE 300 (353)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChh
Confidence 6655444443210 0 0000 112355688999999999999
Q ss_pred CCCCChhcHHHHHcCCCcCC
Q 001869 941 SRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 941 ~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+||| +.++|+||||+.
T Consensus 301 ~R~t----~~eiL~~~~~~~ 316 (353)
T cd07850 301 KRIS----VDDALQHPYINV 316 (353)
T ss_pred hCcC----HHHHhcChhHhh
Confidence 9999 999999999985
No 189
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1e-36 Score=333.19 Aligned_cols=256 Identities=28% Similarity=0.456 Sum_probs=216.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||++.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++++...+.+|+|+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 36889999999999999999999999999999987653 2345567888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+.+++|.+++.... ..+++..+..++.||+.||+|||+ .|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--- 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--- 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence 9999999999997643 568999999999999999999999 99999999999999999999999999987442100
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-----C
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-----T 902 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~-----~ 902 (1002)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||... .
T Consensus 155 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 208 (265)
T cd06605 155 --------------------------LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG 208 (265)
T ss_pred --------------------------HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence 001156888999999999999999999999999999999999999764 2
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.......+............++..+.+||.+||..||.+||| +.+++.||||+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~~~ 262 (265)
T cd06605 209 IFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPS----YKELLEHPFIKK 262 (265)
T ss_pred HHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcC----HHHHhhCchhhc
Confidence 333444444433222111226888999999999999999999 999999999986
No 190
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.6e-36 Score=332.25 Aligned_cols=261 Identities=23% Similarity=0.385 Sum_probs=213.4
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccC---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+|+..+.||+|+||.||++.+..+++.+|+|++....... ......+..|+.+++.++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4788899999999999999999999999999987543211 2245678899999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-cEEEEeccCCcccCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~~~ 825 (1002)
||||+.+++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++ .+||+|||++.......
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999999764 4589999999999999999999999999999999999998776 59999999985543110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
. ..........|+..|+|||.+.+..++.++|+|||||++|+|++|..||.......
T Consensus 159 ~-----------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 215 (268)
T cd06630 159 T-----------------------GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN 215 (268)
T ss_pred c-----------------------cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc
Confidence 0 00111234568999999999988888999999999999999999999997654332
Q ss_pred HHHHHH---hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 906 TFANIL---HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 906 ~~~~i~---~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
....+. ............+..+.+++.+||..+|.+||+ +.++++||||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~ll~~~~~~ 268 (268)
T cd06630 216 HLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP----SRELLKHPVFR 268 (268)
T ss_pred hHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC----HHHHhcCcccC
Confidence 222222 222222222346788999999999999999999 99999999985
No 191
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.3e-36 Score=338.03 Aligned_cols=255 Identities=24% Similarity=0.342 Sum_probs=205.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEcC----------------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 730 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn 730 (1002)
..++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++..++|||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCC
Confidence 34689999999999999999998632 34579999987542 3444567889999999999999
Q ss_pred cceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcc
Q 001869 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------------TKVLKEDAVRFYAAEVVVALEYLHCQGII 793 (1002)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------------~~~l~~~~i~~i~~qil~aL~yLH~~gIi 793 (1002)
|+++++++...+..|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999986531 12367788999999999999999999999
Q ss_pred cCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC
Q 001869 794 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 873 (1002)
Q Consensus 794 HrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~ 873 (1002)
||||||+|||++.++.+||+|||++....... .........+++.|+|||++.+.
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~ 215 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGD-------------------------YYRIQGRAVLPIRWMAWECILMG 215 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCc-------------------------eeEecCcCCCCccccCHHHHhcC
Confidence 99999999999999999999999985432110 01112234567899999999888
Q ss_pred CCCChhhHHHHHHHHHHHHc--CCCCCCCCChHHHHHHHHh---C---CCCCCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001869 874 GHTSAVDWWALGILLYEMLY--GYTPFRGKTRQKTFANILH---K---DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 874 ~~~~~sDIwSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~---~---~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
.++.++|||||||++|+|++ +..||.+.+....+..+.. . .........++..+.+|+.+||+.||.+|||
T Consensus 216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs- 294 (304)
T cd05096 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPS- 294 (304)
T ss_pred CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcC-
Confidence 89999999999999999985 6788887766655544321 1 1112223456788999999999999999999
Q ss_pred hhcHHHH
Q 001869 946 HEGANEI 952 (1002)
Q Consensus 946 ~~~a~el 952 (1002)
+.+|
T Consensus 295 ---~~~i 298 (304)
T cd05096 295 ---FSDI 298 (304)
T ss_pred ---HHHH
Confidence 6666
No 192
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1e-36 Score=338.86 Aligned_cols=255 Identities=27% Similarity=0.468 Sum_probs=216.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|.....||.|+||.||++.+..++..||||.+... .......+.+|+.+++.++||||+++++.+..++..|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 3456667899999999999999999999999988643 2334566888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 99 e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---- 171 (292)
T cd06658 99 EFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE---- 171 (292)
T ss_pred eCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc----
Confidence 99999999998854 34899999999999999999999999999999999999999999999999988543211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
........|++.|+|||.+.+..++.++||||||+++|+|++|+.||.+.+....+.
T Consensus 172 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~ 228 (292)
T cd06658 172 -----------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR 228 (292)
T ss_pred -----------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123568999999999988889999999999999999999999998877766655
Q ss_pred HHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 909 NILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 909 ~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+... ....+.....+..+.++|.+||..||.+||| ++++++||||..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~~~ 277 (292)
T cd06658 229 RIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRAT----AQELLQHPFLKL 277 (292)
T ss_pred HHHhcCCCccccccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhhc
Confidence 54432 2222333456888999999999999999999 999999999996
No 193
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-36 Score=335.26 Aligned_cols=258 Identities=25% Similarity=0.428 Sum_probs=216.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||++.+..+++.||+|++.... .......+.+|+++++.++||||+++++++...+.+|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC 79 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence 34578999999999999999999999999999999887542 2344577889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
+||||+++++|.+++... +.++...+..++.+++.||.|||+ .+|+|+||||+||+++.++.++|+|||++......
T Consensus 80 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999999998764 458999999999999999999997 59999999999999999999999999987432100
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
......|+..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 158 -----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~ 208 (284)
T cd06620 158 -----------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208 (284)
T ss_pred -----------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence 012356899999999998888899999999999999999999999765431
Q ss_pred -----------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 905 -----------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 -----------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..+..+.............+.++.+|+.+||+.||.+||| +.++++|+||..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~e~~~~~~~~~ 271 (284)
T cd06620 209 DDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPT----PQQLCAMPPFIQ 271 (284)
T ss_pred hhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccc
Confidence 2233333332221112236778999999999999999999 999999999976
No 194
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-36 Score=338.73 Aligned_cols=263 Identities=29% Similarity=0.391 Sum_probs=213.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 744 (1002)
..++|++.+.||.|+||.||+|.+..+|..||+|.++.... .......+.+|+.++++++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 45789999999999999999999999999999999875432 122223456799999999999999999998754 578
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999995 58888886542 56899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. .......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~ 214 (309)
T cd07845 162 A---------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE 214 (309)
T ss_pred c---------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0 01112245788999999865 4578899999999999999999999999888
Q ss_pred HHHHHHHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 904 QKTFANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 904 ~~~~~~i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
...+..+.... ...+. ....+..+.+||.+||+.||.+||| +.++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~~il~h 290 (309)
T cd07845 215 IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRAT----AEEALES 290 (309)
T ss_pred HHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcC----HHHHhcC
Confidence 77776665421 01110 0124778899999999999999999 9999999
Q ss_pred CCcCCCCh
Q 001869 956 PFFKGVNW 963 (1002)
Q Consensus 956 p~f~~~~~ 963 (1002)
|||+....
T Consensus 291 ~~f~~~~~ 298 (309)
T cd07845 291 SYFKEKPL 298 (309)
T ss_pred hhhccCCC
Confidence 99997433
No 195
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.1e-36 Score=331.92 Aligned_cols=256 Identities=29% Similarity=0.438 Sum_probs=212.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~---- 742 (1002)
.++|++.+.||.|+||.||+|.+..+++.+++|++.... .....+.+|+.+++++ +|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 468999999999999999999999899999999987542 2345788899999999 7999999999997544
Q ss_pred --eEEEEEecCCCCcHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 743 --HVCLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
.+|+||||+.+++|.+++.... ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999999999987533 456899999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----CCCCChhhHHHHHHHHHHHHc
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~sDIwSlGvil~ellt 893 (1002)
...... ........|++.|+|||++.. ..++.++|||||||++|+|++
T Consensus 161 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 161 AQLDST---------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred eecccc---------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 543210 011223468999999999854 345678999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 894 GYTPFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
|..||...........+...... +......+..+++||.+||..||++||| +.++++|||+
T Consensus 214 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~ll~~~~~ 275 (275)
T cd06608 214 GKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPF----MEELLEHPFI 275 (275)
T ss_pred CCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcC----HHHHhcCCCC
Confidence 99999877666666665554322 2222336778999999999999999999 9999999996
No 196
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-38 Score=349.72 Aligned_cols=250 Identities=26% Similarity=0.423 Sum_probs=209.3
Q ss_pred ccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCc
Q 001869 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGE 755 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggs 755 (1002)
+||+|.||+||.++|..+....|||.+... +.....-+..||.+-+.|+|.|||++++.+..++++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 499999999999999999999999988643 44556678889999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEEeccCCcccCCCCCCCCCcc
Q 001869 756 LFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 756 L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
|.++++... +++ ++..+.+|.+||++||.|||++.|||||||-+|||++. .|.+||+|||-++.+..
T Consensus 659 LSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--------- 728 (1226)
T KOG4279|consen 659 LSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--------- 728 (1226)
T ss_pred HHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc---------
Confidence 999998764 446 78899999999999999999999999999999999985 69999999998865421
Q ss_pred hhhhhcccCCCCCccccccCcccccccCCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH-HHHH
Q 001869 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK-TFAN 909 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~-~~~~ 909 (1002)
-+..+.++.||..|||||++..+ .|+.++|||||||++.||.||++||......+ .+-+
T Consensus 729 ------------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk 790 (1226)
T KOG4279|consen 729 ------------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK 790 (1226)
T ss_pred ------------------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh
Confidence 12234578899999999999765 57789999999999999999999997643322 2211
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+---+.-.|-+..+|.+++.||.+|+.+||..||+ |.++|+.||++.
T Consensus 791 VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~s----A~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 791 VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPS----AKDLLQDPFLQH 837 (1226)
T ss_pred hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCcc----HHHhccCccccc
Confidence 11111122223346889999999999999999999 999999999986
No 197
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-36 Score=334.86 Aligned_cols=257 Identities=30% Similarity=0.454 Sum_probs=213.1
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..++..||+|.+.... .......+.+|+.++++++||||+++++++...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 36899999999999999999999999999999887532 3344567889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 749 DYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+++++|..++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.+||+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 9999999999886531 2368999999999999999999997 59999999999999999999999999988543110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC------CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
......|++.|+|||.+.+.. ++.++|||||||++|+|++|..||..
T Consensus 157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 157 ---------------------------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred ---------------------------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 112345888999999985543 47799999999999999999999976
Q ss_pred CChHHHHHH---HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 901 KTRQKTFAN---ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 901 ~~~~~~~~~---i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
......... +.... .......++.++.+||.+||+.+|.+||+ +.++++||||...
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~~~~~~~~ 268 (286)
T cd06622 210 ETYANIFAQLSAIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPT----YAQLLEHPWLVKY 268 (286)
T ss_pred cchhhHHHHHHHHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCC----HHHHhcChhhhhc
Confidence 554443332 23222 12222347889999999999999999999 9999999999874
No 198
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-38 Score=314.77 Aligned_cols=265 Identities=24% Similarity=0.334 Sum_probs=214.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE-----e
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-----T 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-----~ 740 (1002)
++.++|++.+.||+|||+.||++.+..+++.||+|.+... .....+...+|++..++++||||++++++.. .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 6778999999999999999999999999999999998765 3566778889999999999999999988753 3
Q ss_pred CCeEEEEEecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEccCCcEEEEecc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
....||+++|+..|+|.+.+... ++..+++.++..|+.+|++||++||+.. .+||||||.|||+++++.++|.|||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence 45699999999999999998753 3457999999999999999999999998 9999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC---CCCCChhhHHHHHHHHHHHHc
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~sDIwSlGvil~ellt 893 (1002)
.++.....-.. ..+..-.. .-.....|..|+|||.+.- ...+.++|||||||+||.|++
T Consensus 175 S~~~a~i~i~~--------------~~~a~~lQ----e~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf 236 (302)
T KOG2345|consen 175 SATQAPIQIEG--------------SRQALRLQ----EWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMF 236 (302)
T ss_pred CccccceEeec--------------hHHHHHHH----HHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHH
Confidence 98653211000 00000000 0112357889999999854 445679999999999999999
Q ss_pred CCCCCCCCCh--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 894 GYTPFRGKTR--QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 894 G~~Pf~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|..||..... ....-.+....+.+|....+|..+.+||+.||+.||.+||+ +.+++.+
T Consensus 237 ~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~----i~~ll~~ 296 (302)
T KOG2345|consen 237 GESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPT----IPELLSK 296 (302)
T ss_pred cCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCC----HHHHHHH
Confidence 9999953211 11112344567889999899999999999999999999999 7777653
No 199
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.1e-36 Score=328.50 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=211.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+...+|.+.+.||+|+||.||+|.+..+++.+|+|.+... ......+.+|+.+++.++||||+++++++...+.++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 4556799999999999999999999999999999998643 233567888999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+++++|.+++.......++...++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999999976555668999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
. .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus 159 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 212 (263)
T cd05052 159 Y--------------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 212 (263)
T ss_pred e--------------------------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 0 00112234678999999998889999999999999999998 99999888776
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+....+... ...+....++..+.++|.+||+.||++||++.+
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 254 (263)
T cd05052 213 QVYELLEKG-YRMERPEGCPPKVYELMRACWQWNPSDRPSFAE 254 (263)
T ss_pred HHHHHHHCC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 666555443 333344557889999999999999999999433
No 200
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.6e-36 Score=331.69 Aligned_cols=255 Identities=27% Similarity=0.470 Sum_probs=216.9
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|...+.||.|++|.||++.+..+++.+++|.+... .......+.+|+.+++.++||||+++++++...+..|+|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 455567899999999999999889999999988643 23344567889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.|++|.+++.. ..++...+..++.||+.||+|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~----- 168 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE----- 168 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-----
Confidence 9999999999876 34899999999999999999999999999999999999999999999999987432110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+....+..
T Consensus 169 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~ 226 (285)
T cd06648 169 ----------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR 226 (285)
T ss_pred ----------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence 0111235689999999999888899999999999999999999999988877776666
Q ss_pred HHhCCCCCC-CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 910 ILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 910 i~~~~~~~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+........ ....++..+.+||.+||+.+|++||+ +.++++||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~ 275 (285)
T cd06648 227 IRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT----AAELLNHPFLAKA 275 (285)
T ss_pred HHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcC----HHHHccCcccccC
Confidence 655432222 22336789999999999999999999 9999999999873
No 201
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-37 Score=349.47 Aligned_cols=253 Identities=25% Similarity=0.388 Sum_probs=217.0
Q ss_pred ccccccccCCcEEEEEEEEcCCCeEEEEEEeecc-cccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--eEEEEE
Q 001869 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG-VMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCLIT 748 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lV~ 748 (1002)
+.-..||+|+|-+||+|.|..+|..||--.++.. ....+....++..|+.+|+.|+||||+++|+++.+.+ .+-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 3446799999999999999999988875444332 2335666789999999999999999999999998654 588999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEccC-CcEEEEeccCCcccCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~-g~vkL~DFG~a~~~~~~~ 825 (1002)
|+|..|+|..|+++. +.++...++.|++||++||.|||++. |||||||.+||+|+.+ |.|||+|+|+|..+...
T Consensus 123 EL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred ecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 999999999999885 55899999999999999999999994 9999999999999965 89999999999765321
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~-~~~~ 904 (1002)
...+++|||.|||||++. ..|+..+||||||++++||+|+.+||.. .+..
T Consensus 200 ----------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 200 ----------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred ----------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 123479999999999987 6789999999999999999999999965 6778
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
++|+++..+..+-.-....++++++||.+||.. ...|+| +.+||+||||..-
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~s----a~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLS----AKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccC----HHHHhhChhhccc
Confidence 888888887655444444578999999999999 899999 9999999999974
No 202
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.2e-36 Score=332.17 Aligned_cols=257 Identities=28% Similarity=0.388 Sum_probs=211.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC-----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK----- 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~----- 741 (1002)
.++|.+.+.||+|+||.||++.+..+++.+|+|++.... .....+..|+.+++++ +|||++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 478999999999999999999999999999999986431 2234567789999988 899999999998753
Q ss_pred CeEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 742 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
+.+|+||||+++++|.++++. .....+++..++.++.|++.||.|||+.||+|+||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 468999999999999998863 223568999999999999999999999999999999999999999999999999885
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-----CCCChhhHHHHHHHHHHHHcC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~~~~sDIwSlGvil~elltG 894 (1002)
...... .......|++.|+|||++... .++.++|||||||++|+|++|
T Consensus 177 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g 229 (291)
T cd06639 177 QLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229 (291)
T ss_pred hccccc---------------------------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence 432110 011234688999999998543 257899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 895 YTPFRGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
++||...+....+..+..... .+......+..+.+||.+||+.+|++||+ +.++++||||+
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~il~~~~~~ 291 (291)
T cd06639 230 DPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPS----VTHLLEHPFIK 291 (291)
T ss_pred CCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcC----HHHHhcCcccC
Confidence 999988777666666554432 22223345678999999999999999999 99999999995
No 203
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.7e-36 Score=335.40 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=210.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|.+.+... .......+.+|+++++.++||||+++++++...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 368999999999999999999998999999999876432 2234456778999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|..+.... ..++...+..++.||+.||+|||+.||+|+||+|+||++++++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07846 80 EFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 154 (286)
T ss_pred ecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence 999999888876543 348999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+....+..
T Consensus 155 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 210 (286)
T cd07846 155 ------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL 210 (286)
T ss_pred ------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHH
Confidence 11123468899999999875 34678999999999999999999999876655444
Q ss_pred HHHHhC-------------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~-------------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+... ....+. ...++..+.+|+.+||..+|.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~~ 286 (286)
T cd07846 211 YHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS----SSQLLHHEFF 286 (286)
T ss_pred HHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh----HHHHhcCCCC
Confidence 433321 011111 1345778999999999999999999 9999999998
No 204
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.6e-36 Score=332.25 Aligned_cols=261 Identities=26% Similarity=0.392 Sum_probs=209.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
++|++++.||+|+||.||++.+..+|+.||+|.+..... . .....+..|+.+ ++.++||||+++++++...+.+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-S-QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-c-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 478999999999999999999999999999999876432 1 223345556654 6677999999999999999999999
Q ss_pred EecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|||++ ++|.+++... ....+++..++.++.||+.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99995 7888877642 234689999999999999999999998 9999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC----CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.......|+..|+|||++.+ ..++.++|+|||||++|+|++|+.||..
T Consensus 158 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 ----------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred ----------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 01122458889999999865 4467899999999999999999999965
Q ss_pred C-ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 901 K-TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 901 ~-~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
. ...+.+..+............++.++.+||.+||..+|.+||+ +.++++||||......
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~ 270 (283)
T cd06617 210 WKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPN----YPELLQHPFFELHLSK 270 (283)
T ss_pred cccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhhhcccc
Confidence 3 3334444444432221122346789999999999999999999 9999999999986543
No 205
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.4e-36 Score=330.24 Aligned_cols=258 Identities=28% Similarity=0.393 Sum_probs=218.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|+.++.||.|+||.||+|.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 36888999999999999999999999999999987542 2344567888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++|++|.+++.. ..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06640 82 EYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......++..|+|||++.+..++.++|+|||||++|+|++|..||...+......
T Consensus 156 ------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06640 156 ------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF 211 (277)
T ss_pred ------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh
Confidence 01123468889999999988889999999999999999999999998877665554
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
.+..... ......++..+.+|+.+||+.+|.+||+ +.++++||||.....
T Consensus 212 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~ 261 (277)
T cd06640 212 LIPKNNP-PTLTGEFSKPFKEFIDACLNKDPSFRPT----AKELLKHKFIVKNAK 261 (277)
T ss_pred hhhcCCC-CCCchhhhHHHHHHHHHHcccCcccCcC----HHHHHhChHhhhcch
Confidence 4433221 1122235678999999999999999999 999999999987544
No 206
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.3e-36 Score=327.67 Aligned_cols=253 Identities=22% Similarity=0.347 Sum_probs=212.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||++.+. ++..||+|.+.... .....+.+|+.+++.++|+||+++++++...+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 456679999999999999999999974 56679999876532 2356788899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++.......++...+..++.||+.||+|||+++++|+||||+||+++.++.++|+|||++......
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999999998765567899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.. .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 157 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 210 (261)
T cd05072 157 EY--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210 (261)
T ss_pred ce--------------------------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence 00 01112346678999999988888999999999999999998 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
......+... ...+....++.++.+++.+||..+|++||+ ++++.
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~ 255 (261)
T cd05072 211 SDVMSALQRG-YRMPRMENCPDELYDIMKTCWKEKAEERPT----FDYLQ 255 (261)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHH
Confidence 7666655443 444555567889999999999999999999 55553
No 207
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.2e-36 Score=332.40 Aligned_cols=257 Identities=26% Similarity=0.381 Sum_probs=209.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEE-----e
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----T 740 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~ 740 (1002)
..++|++++.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 3578999999999999999999999999999999876431 1234567899999999 7999999999874 4
Q ss_pred CCeEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
++.+|+||||++|++|.+++.. .....+++..++.++.|++.||.|||+++|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 5679999999999999998753 22346889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----CCCCChhhHHHHHHHHHHHHc
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~sDIwSlGvil~ellt 893 (1002)
....... .......|++.|+|||++.. ..++.++|||||||++|+|++
T Consensus 172 ~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 172 AQLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred eecccCC---------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 5432110 01123468999999999853 446789999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 894 GYTPFRGKTRQKTFANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
|+.||........+..+.... ........++..+.+||.+||+.||++||| +.++++|+||
T Consensus 225 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~~~~ 286 (286)
T cd06638 225 GDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPT----VSDLLQHVFI 286 (286)
T ss_pred CCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCC----HHHHhhcccC
Confidence 999998776655444433322 122222335778999999999999999999 9999999997
No 208
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.2e-36 Score=333.43 Aligned_cols=256 Identities=27% Similarity=0.456 Sum_probs=205.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++.+.||.|++|.||+|.+..+++.||||.+...... .....+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 46899999999999999999999989999999998754321 1223466799999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 82 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 156 (291)
T cd07844 82 FEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP--- 156 (291)
T ss_pred EecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC---
Confidence 99996 58999887643 36899999999999999999999999999999999999999999999999988532110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC-hHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQK 905 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~-~~~ 905 (1002)
........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.. ..+
T Consensus 157 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~ 212 (291)
T cd07844 157 ------------------------SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED 212 (291)
T ss_pred ------------------------CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 001112346889999999876 457889999999999999999999997665 223
Q ss_pred HHHHHHhC-------------------CCCCC---------CCCCCC--HHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 906 TFANILHK-------------------DLKFP---------SSTPTS--LHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 906 ~~~~i~~~-------------------~~~~~---------~~~~~s--~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.+..+... ...++ .....+ .++.++|.+||+.+|.+||| +.++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps----~~e~l~~ 288 (291)
T cd07844 213 QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS----AAEAMKH 288 (291)
T ss_pred HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC----HHHHhcC
Confidence 22222110 00000 001223 67889999999999999999 9999999
Q ss_pred CCc
Q 001869 956 PFF 958 (1002)
Q Consensus 956 p~f 958 (1002)
|||
T Consensus 289 ~~f 291 (291)
T cd07844 289 PYF 291 (291)
T ss_pred CCC
Confidence 998
No 209
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=8.3e-36 Score=324.19 Aligned_cols=255 Identities=30% Similarity=0.453 Sum_probs=214.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccc--cChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+|+..+.||+|+||.||+|.+..++..|++|.+..... ........+.+|+.+++.++|+||+++++++.....+|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47788999999999999999988999999999875432 1234556788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ..+++..+..++.||+.||+|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 9999999999999764 358899999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
......|++.|++||.+.... ++.++|+|||||++|+|++|..||........
T Consensus 157 --------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~ 210 (258)
T cd06632 157 --------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA 210 (258)
T ss_pred --------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence 112356889999999987766 88899999999999999999999987765555
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+............++..+.+|+.+||+.+|.+||+ +.++++|||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 258 (258)
T cd06632 211 VFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPT----AAELLEHPFV 258 (258)
T ss_pred HHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcC----HHHHhcCCCC
Confidence 54444322111222346788999999999999999999 9999999996
No 210
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.1e-36 Score=328.59 Aligned_cols=258 Identities=26% Similarity=0.426 Sum_probs=212.2
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccC-------hhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------RNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
+|.+.+.||.|+||.||++.+..+++.+|+|.++...... ......+..|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 5888899999999999999998899999999886432111 112356778999999999999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+++||||+++++|.+++... ..++...++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999999765 468999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.... ........|+..|+|||.+.... ++.++|+||||+++|++++|..||..
T Consensus 160 ~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 160 DIYD-------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred cccc-------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 1100 00112346889999999987654 78899999999999999999999977
Q ss_pred CChHHHHHHHHhCC--CCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 901 KTRQKTFANILHKD--LKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~--~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
......+..+.... ..++.. ..++..+.+||.+||..+|.+||+ ++++++||||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~ 272 (272)
T cd06629 215 EEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT----ARELLQHPFI 272 (272)
T ss_pred cchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCC----HHHHhhCCCC
Confidence 66555444433222 222221 345789999999999999999999 9999999997
No 211
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7.1e-36 Score=334.56 Aligned_cols=256 Identities=27% Similarity=0.384 Sum_probs=216.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56999999999999999999999899999999987554444555667889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+. |+|.+++... ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~----- 167 (307)
T cd06607 95 EYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP----- 167 (307)
T ss_pred HhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-----
Confidence 9995 6777776543 24589999999999999999999999999999999999999999999999998854211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....|++.|+|||++. ...++.++||||||+++|+|++|..||.+.+...
T Consensus 168 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~ 221 (307)
T cd06607 168 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (307)
T ss_pred --------------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH
Confidence 11346888999999984 3557789999999999999999999998887766
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
....+............++..+.++|.+||+.||.+||+ +.+++.||||...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 273 (307)
T cd06607 222 ALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPS----SEELLKHRFVLRE 273 (307)
T ss_pred HHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcC----HHHHhcChhhccc
Confidence 655554443222222346778999999999999999999 9999999999874
No 212
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.6e-36 Score=364.20 Aligned_cols=271 Identities=25% Similarity=0.333 Sum_probs=211.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++............++.+|+.+++.++||||+++++++.+++..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999999999999999998654444555677899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 749 DYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
||++|++|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 9999999999986421 1235567788899999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
............. . ................+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 162 ~i~~~~~~~~~l~-------~--~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~ 232 (932)
T PRK13184 162 FKKLEEEDLLDID-------V--DERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232 (932)
T ss_pred ecccccccccccc-------c--ccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 6421111000000 0 000000111122234689999999999999999999999999999999999999998
Q ss_pred CCChHHHHHHH-HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 900 GKTRQKTFANI-LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 900 ~~~~~~~~~~i-~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
........... ............++..+.+++.+||+.||.+|++..+.
T Consensus 233 ~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~ee 282 (932)
T PRK13184 233 RKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQE 282 (932)
T ss_pred CcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 76554332221 11111222223567889999999999999999985443
No 213
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5e-36 Score=333.41 Aligned_cols=261 Identities=23% Similarity=0.371 Sum_probs=212.9
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999865422 2233456778999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEEeccCCcccCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+ +++|..++.......+++..++.++.||+.||+|||++||+|+||+|+||+++. ++.+||+|||++......
T Consensus 81 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~--- 156 (294)
T PLN00009 81 EYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP--- 156 (294)
T ss_pred ecc-cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC---
Confidence 999 468888887655555788999999999999999999999999999999999985 567999999998543211
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........|++.|+|||++.+. .++.++|||||||++|+|++|.+||...+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~ 212 (294)
T PLN00009 157 ------------------------VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE 212 (294)
T ss_pred ------------------------ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0011224578899999998664 578899999999999999999999988777665
Q ss_pred HHHHHhCC--C-------------------CCC------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 907 FANILHKD--L-------------------KFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 907 ~~~i~~~~--~-------------------~~~------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+.++.... . .++ .....+..+.++|.+||+.+|++||+ +.++++||||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~~l~~~~~~ 288 (294)
T PLN00009 213 LFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRIT----ARAALEHEYFK 288 (294)
T ss_pred HHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcC----HHHHhcCchHh
Confidence 55543210 0 000 01345778999999999999999999 99999999999
Q ss_pred CCC
Q 001869 960 GVN 962 (1002)
Q Consensus 960 ~~~ 962 (1002)
.++
T Consensus 289 ~~~ 291 (294)
T PLN00009 289 DLG 291 (294)
T ss_pred HHh
Confidence 753
No 214
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.9e-36 Score=342.07 Aligned_cols=261 Identities=24% Similarity=0.358 Sum_probs=209.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcC-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (1002)
|++..++|++++.||.|+||.||+|.+.. +++.||+|++.... .......+..|+.+++++ +|+||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeee
Confidence 34556789999999999999999997543 45789999987532 233445677899999999 89999999998
Q ss_pred EEe-CCeEEEEEecCCCCcHHHHHhhCCC---------------------------------------------------
Q 001869 738 FQT-KTHVCLITDYCPGGELFLLLDRQPT--------------------------------------------------- 765 (1002)
Q Consensus 738 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~~--------------------------------------------------- 765 (1002)
+.. ...++++|||+++++|.+++.....
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 764 5678999999999999999864321
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhh
Q 001869 766 --------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 837 (1002)
Q Consensus 766 --------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~ 837 (1002)
..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~----------- 228 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----------- 228 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----------
Confidence 2578999999999999999999999999999999999999999999999999865421110
Q ss_pred cccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCC
Q 001869 838 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLK 916 (1002)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~ 916 (1002)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+.....
T Consensus 229 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~ 294 (337)
T cd05054 229 --------------YVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR 294 (337)
T ss_pred --------------hhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC
Confidence 001123456778999999999999999999999999999997 99999876554445445444433
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 917 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 917 ~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.......+.++.+++.+||+.+|++||+ +.++++|
T Consensus 295 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs----~~ell~~ 329 (337)
T cd05054 295 MRAPEYATPEIYSIMLDCWHNNPEDRPT----FSELVEI 329 (337)
T ss_pred CCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 3334456789999999999999999999 7777654
No 215
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.3e-36 Score=334.51 Aligned_cols=259 Identities=27% Similarity=0.408 Sum_probs=213.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+|++.+.||.|+||.||+|.+..+++.||+|.+...... .......+..|+.+++.++|+||+++++++.+.+.+|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488889999999999999999999999999999865432 122344567899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+ +++|.+++.... ..+++..+..++.||++||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-- 156 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--
Confidence 9999 999999997643 369999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+....
T Consensus 157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~ 211 (298)
T cd07841 157 -------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ 211 (298)
T ss_pred -------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH
Confidence 01122356888999999855 4568899999999999999999998988776665
Q ss_pred HHHHHhCCC-----CC---------------C------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 907 FANILHKDL-----KF---------------P------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 907 ~~~i~~~~~-----~~---------------~------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.++...-. .+ + .....+..+.+||.+||+.||.+||| +.++++||||++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~e~l~~~~~~~ 287 (298)
T cd07841 212 LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT----ARQALEHPYFSN 287 (298)
T ss_pred HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC----HHHHhhCccccC
Confidence 555432100 00 0 01234678899999999999999999 999999999997
Q ss_pred C
Q 001869 961 V 961 (1002)
Q Consensus 961 ~ 961 (1002)
.
T Consensus 288 ~ 288 (298)
T cd07841 288 D 288 (298)
T ss_pred C
Confidence 4
No 216
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.5e-36 Score=326.22 Aligned_cols=258 Identities=29% Similarity=0.479 Sum_probs=220.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|++|.||+|.+..+++.|++|.+..... ......+.+|+.++..++|+||+++++++...+.+|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 368899999999999999999999999999999876532 145677889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+++++|.+++... ..+++..+..++.||+.||.|||+ +|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-- 154 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-- 154 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC--
Confidence 999999999999764 558999999999999999999999 999999999999999999999999999885532110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---ChH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---TRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~---~~~ 904 (1002)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||... ...
T Consensus 155 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~ 209 (264)
T cd06623 155 -------------------------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF 209 (264)
T ss_pred -------------------------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH
Confidence 0112346888999999999888899999999999999999999999776 344
Q ss_pred HHHHHHHhCCCCCCCCCC-CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 905 KTFANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~-~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
+....+..... ...... ++..+.++|.+||..+|++||+ +.++++||||+.++
T Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~ll~~~~~~~~~ 263 (264)
T cd06623 210 ELMQAICDGPP-PSLPAEEFSPEFRDFISACLQKDPKKRPS----AAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHHhcCCC-CCCCcccCCHHHHHHHHHHccCChhhCCC----HHHHHhCHHHHhcc
Confidence 44444443332 222233 6888999999999999999999 99999999998754
No 217
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.8e-36 Score=327.15 Aligned_cols=255 Identities=26% Similarity=0.377 Sum_probs=209.9
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||||.+.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57999999999999999999999999999999887644445566677889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+++++|.+++... ....+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~- 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence 999999999888632 23458999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 904 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--~ 904 (1002)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||..... .
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~ 214 (267)
T cd08228 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF 214 (267)
T ss_pred --------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence 011234688999999999888889999999999999999999999965432 2
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.....+.....+.......+..+.++|.+||..+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~vl~ 260 (267)
T cd08228 215 SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPD----IGYVHQ 260 (267)
T ss_pred HHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcC----HHHHHH
Confidence 3333333322211112245778999999999999999999 666654
No 218
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.4e-36 Score=346.37 Aligned_cols=259 Identities=23% Similarity=0.305 Sum_probs=210.6
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEE
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYA 736 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~ 736 (1002)
.+.+..++|++++.||+|+||.||+|.+... +..||||++.... .......+.+|+.+++.++ ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 3445678999999999999999999987433 3579999987542 3344567889999999996 999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCC----------------------------------------------------
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQP---------------------------------------------------- 764 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------- 764 (1002)
++...+.+|+|||||++|+|.+++..+.
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 9999999999999999999999886431
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 765 ------------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 765 ------------------------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
...++...+..++.||+.||+|||++||+||||||+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 12477888899999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 323 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSN-------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVW 323 (400)
T ss_pred EEeCCCEEEEEeCCcceecccccc-------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence 999999999999999864321100 0112234578899999999998899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
||||++|+|++ |..||........+...+......+....++..+.+++.+||+.||++||++.+.
T Consensus 324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l 390 (400)
T cd05105 324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHL 390 (400)
T ss_pred HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHH
Confidence 99999999996 9999987655444444445444445555678899999999999999999995543
No 219
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.6e-36 Score=334.43 Aligned_cols=258 Identities=27% Similarity=0.396 Sum_probs=216.7
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|+.++.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 35888899999999999999999999999999987542 2334567889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++.. ..+++..++.++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999999998864 458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||..........
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06642 156 ------------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF 211 (277)
T ss_pred ------------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh
Confidence 01123468889999999998889999999999999999999999998766555444
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
.+...... .....++..+.++|.+||+.+|++||+ +.++++||||....+
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~ 261 (277)
T cd06642 212 LIPKNSPP-TLEGQYSKPFKEFVEACLNKDPRFRPT----AKELLKHKFITRYTK 261 (277)
T ss_pred hhhcCCCC-CCCcccCHHHHHHHHHHccCCcccCcC----HHHHHHhHHHHHHhh
Confidence 43332221 112246778999999999999999999 999999999987443
No 220
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-36 Score=362.81 Aligned_cols=268 Identities=24% Similarity=0.320 Sum_probs=200.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCC-eEEEEE--------------EeecccccChhHHHHHHHHHHHHHhCCCCCcc
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMK--------------AMDKGVMLNRNKVHRACAEREILDMLDHPFVP 732 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~vaiK--------------~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv 732 (1002)
.++|++++.||+|+||.||+|..+... ...++| .+.+...........+.+|+.+|+.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 478999999999999999999764332 222222 11111112233455678999999999999999
Q ss_pred eEEEEEEeCCeEEEEEecCCCCcHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc
Q 001869 733 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 733 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~ 809 (1002)
++++++...+..|+|++++ +++|..++.... ........++.++.||+.||.|||++|||||||||+|||++.++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 9999999999999999999 667887765421 122446678889999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHH
Q 001869 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
+||+|||++..+.... .......+||+.|+|||++.+..++.++|||||||++|
T Consensus 306 vkL~DFGla~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 306 IVLGDFGTAMPFEKER--------------------------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred EEEEeCCCceecCccc--------------------------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 9999999986543110 01122457999999999999999999999999999999
Q ss_pred HHHcCCCCCCCC---ChHHHHHHHHhCC----CCCC--------------------------CCCCCCHHHHHHHHHccc
Q 001869 890 EMLYGYTPFRGK---TRQKTFANILHKD----LKFP--------------------------SSTPTSLHAKQLMYRLLH 936 (1002)
Q Consensus 890 elltG~~Pf~~~---~~~~~~~~i~~~~----~~~~--------------------------~~~~~s~~~~~Ll~~~L~ 936 (1002)
+|++|..++.+. .....+..++... ..++ .....+.++.++|.+||+
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 999987654322 2222222222210 0011 011245567888999999
Q ss_pred cCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 937 RDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 937 ~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
+||.+||| +.|+|.||||........
T Consensus 440 ~DP~~Rps----a~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 440 FDWHLRPG----AAELLALPLFSAEEEEEI 465 (501)
T ss_pred cCcccCcC----HHHHhhChhhhcCCchHH
Confidence 99999999 999999999998765544
No 221
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.4e-36 Score=329.92 Aligned_cols=257 Identities=27% Similarity=0.458 Sum_probs=214.2
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~l 746 (1002)
.|++++.||.|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.+. |||++++++++..++..|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5888999999999999999999999999999987542 2344567788999999986 9999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+++++|.+++... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 99999999999998653 58999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.......|++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~ 209 (277)
T cd06917 156 --------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR 209 (277)
T ss_pred --------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 11123468999999999865 456889999999999999999999998876655
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
....+.....+.......+.++.+++.+||+.||.+||+ +.++++||||+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~il~~~~~~~~~ 262 (277)
T cd06917 210 AMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLS----AEELLKSKWIKAHS 262 (277)
T ss_pred hhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcC----HHHHhhChHhhccc
Confidence 444333322111111236788999999999999999999 99999999998743
No 222
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.1e-36 Score=325.27 Aligned_cols=256 Identities=27% Similarity=0.471 Sum_probs=217.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|.+.+.||.|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++|+||+++++.+...+.+|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 48889999999999999999999999999999876432 22344577889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-cEEEEeccCCcccCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+++++|.+++.......+++..+..++.||+.||.|||+++|+|+||||+||+++.++ .+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 99999999999876555689999999999999999999999999999999999999886 46999999885432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+......
T Consensus 157 ------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 212 (257)
T cd08225 157 ------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL 212 (257)
T ss_pred ------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 01122458999999999988888999999999999999999999998877766666
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+...... +.....+..+.++|.+||..+|++||| +.++++||||
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~~~~~ 257 (257)
T cd08225 213 KICQGYFA-PISPNFSRDLRSLISQLFKVSPRDRPS----ITSILKRPFL 257 (257)
T ss_pred HHhcccCC-CCCCCCCHHHHHHHHHHhccChhhCcC----HHHHhhCCCC
Confidence 65554332 223356788999999999999999999 9999999997
No 223
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.9e-36 Score=329.48 Aligned_cols=256 Identities=21% Similarity=0.308 Sum_probs=213.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEcC-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..++|.+++.||+|+||.||+|.+.. +++.||+|.++... .......+.+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 35689999999999999999998743 46889999987542 233456888999999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc
Q 001869 742 THVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~ 809 (1002)
+..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 99999999999999999997532 235788999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHH
Q 001869 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
+||+|||++....... .........+++.|+|||++.+..++.++|||||||++|
T Consensus 161 ~kl~d~g~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 161 VKIGDFGMSRDVYTTD-------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred EEECCcccceecccCc-------------------------ceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence 9999999985432110 001112335678899999999999999999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 890 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 890 ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+|++ |..||.+.+.......+..+....+ ...++..+.+|+.+||+.||.+||+ +.++++
T Consensus 216 e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~ 276 (280)
T cd05049 216 EIFTYGKQPWYGLSNEEVIECITQGRLLQR-PRTCPSEVYDIMLGCWKRDPQQRIN----IKDIHE 276 (280)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHcCCCcccCCC----HHHHHH
Confidence 9998 9999998888777777765544332 2357889999999999999999999 666653
No 224
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.4e-35 Score=323.70 Aligned_cols=259 Identities=29% Similarity=0.531 Sum_probs=216.3
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||+|+||.||++.+..+++.|++|.+..... .......+..|+.+++.++|+||+++++++...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 58899999999999999999988999999999886533 24567888999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 80 YCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred cCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 99999999999764 448899999999999999999999999999999999999999999999999986543221100
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC---CCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........+++.|+|||++.+.. ++.++||||||+++|++++|..||........
T Consensus 157 ----------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~ 214 (264)
T cd06626 157 ----------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ 214 (264)
T ss_pred ----------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH
Confidence 00012356889999999998766 78899999999999999999999976533322
Q ss_pred -HHHHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 -FANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 -~~~i~~-~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+.. ....+|....++..+.+||.+||+.+|.+||+ +.+++.|||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~i~~~~~~ 264 (264)
T cd06626 215 IMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT----ASELLQHPFV 264 (264)
T ss_pred HHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 222222 23344444455888999999999999999999 9999999996
No 225
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.7e-36 Score=334.43 Aligned_cols=257 Identities=28% Similarity=0.464 Sum_probs=217.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|.....||.|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 35666778999999999999999899999999986532 223456788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|..++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~---- 170 (297)
T cd06659 98 EFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---- 170 (297)
T ss_pred ecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc----
Confidence 99999999998754 34899999999999999999999999999999999999999999999999988543211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
........|++.|+|||++.+..++.++|||||||++|+|++|+.||...+....+.
T Consensus 171 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 227 (297)
T cd06659 171 -----------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 227 (297)
T ss_pred -----------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011223568999999999998889999999999999999999999998877766666
Q ss_pred HHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 909 NILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 909 ~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.+...... +......+..+.++|.+||+.+|.+||+ +.++++||||....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps----~~~ll~~~~~~~~~ 278 (297)
T cd06659 228 RLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERAT----AQELLDHPFLLQTG 278 (297)
T ss_pred HHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcC----HHHHhhChhhccCC
Confidence 55443222 2223456788999999999999999999 99999999999753
No 226
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.7e-36 Score=330.29 Aligned_cols=279 Identities=37% Similarity=0.639 Sum_probs=227.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV 747 (1002)
++|.+.+.||.|+||.||++.+..++..||+|++.+...........+..|..+++.+. ||||+++++++...+.+++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 37999999999999999999999999999999998754444455677888999999998 99999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.+++|.+++... ..++...++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999999999875 35999999999999999999999999999999999999999999999999998654322111
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
........ .................|+..|+|||++.+..++.++||||||+++|++++|..||...+....+
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 231 (280)
T cd05581 159 ESNKGDAT-------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231 (280)
T ss_pred ccCCCCCc-------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 00000000 00000011112334567899999999998888889999999999999999999999988877777
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+......++. .++..+.+||.+||+.||.+||++....+++++||||
T Consensus 232 ~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 232 QKILKLEYSFPP--NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHhcCCCCCC--ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 777655555443 4578899999999999999999943333999999998
No 227
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=7.5e-36 Score=331.95 Aligned_cols=258 Identities=22% Similarity=0.386 Sum_probs=208.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe----
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH---- 743 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~---- 743 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.+. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 369999999999999999999999999999998875421 2223456778999999995 6999999999987665
Q ss_pred -EEEEEecCCCCcHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEEeccCC
Q 001869 744 -VCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLS 818 (1002)
Q Consensus 744 -~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a 818 (1002)
.|+||||+.+ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999975 7888876532 245899999999999999999999999999999999999998 889999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
...... ........+++.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus 159 ~~~~~~---------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 211 (295)
T cd07837 159 RAFSIP---------------------------VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211 (295)
T ss_pred eecCCC---------------------------ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence 543211 001112357889999999865 4568899999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCC-----C------------CCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 898 FRGKTRQKTFANILHKDL-----K------------FPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~-----~------------~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
|.+.+....+..+...-. . ++. ...++..+.+||.+||..||.+||+ +.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~----~~e 287 (295)
T cd07837 212 FPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS----AKA 287 (295)
T ss_pred CCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC----HHH
Confidence 998877666655543100 0 000 1236788999999999999999999 999
Q ss_pred HHcCCCcC
Q 001869 952 IKKHPFFK 959 (1002)
Q Consensus 952 lL~Hp~f~ 959 (1002)
+++||||+
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999985
No 228
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-35 Score=328.52 Aligned_cols=259 Identities=28% Similarity=0.453 Sum_probs=212.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCL 746 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~~l 746 (1002)
++|+..+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||++++++|.. .+.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 46889999999999999999999999999999987542 23455778899999999999999999998864 447899
Q ss_pred EEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 747 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||+++++|.+++.. .....+++..+..++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999988753 22355899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC---
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 901 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~--- 901 (1002)
......++..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus 159 -----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (287)
T cd06621 159 -----------------------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP 209 (287)
T ss_pred -----------------------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence 011245788899999999888999999999999999999999999765
Q ss_pred --ChHHHHHHHHhCCC-CCCCC----CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 902 --TRQKTFANILHKDL-KFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 902 --~~~~~~~~i~~~~~-~~~~~----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
...+....+..... .++.. ...+..+.+||.+||..+|.+||| +.++++||||+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~~ 273 (287)
T cd06621 210 PLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPT----PWDMLEHPWIKAQM 273 (287)
T ss_pred CCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCC----HHHHHhCccccccc
Confidence 22333333333221 11111 224568899999999999999999 99999999998753
No 229
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-35 Score=329.63 Aligned_cols=268 Identities=44% Similarity=0.769 Sum_probs=217.9
Q ss_pred CcccccccccCCcEEEEEEEEc---CCCeEEEEEEeecccccC-hhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
.|++.+.||.|+||.||+|.+. .+|..||+|++....... ......+.+|+.+++.+ +|+||+.+++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4888999999999999999985 478999999987643222 23345677899999999 699999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||+|+|||++.++.+||+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999999764 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. ........|+..|+|||.+.+. .++.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 212 (290)
T cd05613 159 E--------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212 (290)
T ss_pred c--------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC
Confidence 0 0111235689999999998653 46778999999999999999999996432
Q ss_pred h----HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhh
Q 001869 903 R----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 903 ~----~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
. ......+......++ ..++..+.+|+.+||+.||.+||++. ..+.+++.||||+.++|..+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~ 280 (290)
T cd05613 213 EKNSQAEISRRILKSEPPYP--QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLA 280 (290)
T ss_pred ccccHHHHHHHhhccCCCCC--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHh
Confidence 2 333333333333333 34678899999999999999998532 349999999999999998874
No 230
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.9e-36 Score=335.44 Aligned_cols=250 Identities=26% Similarity=0.428 Sum_probs=191.3
Q ss_pred cccccCCcEEEEEEEEcC--CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeEEEEEec
Q 001869 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLITDY 750 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~lV~E~ 750 (1002)
+.||+|+||.||+|.+.. ++..||+|.+.... ....+.+|+.+++.++||||+++++++. ....+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 56899999886532 2235678999999999999999999885 45688999999
Q ss_pred CCCCcHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE----ccCCcEEEEeccCCc
Q 001869 751 CPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 819 (1002)
Q Consensus 751 ~~ggsL~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl----~~~g~vkL~DFG~a~ 819 (1002)
+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 82 ~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 A-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred e-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 9 56888877531 12358899999999999999999999999999999999999 456799999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
....... .........||+.|+|||++.+. .++.++|||||||++|+|++|.+||
T Consensus 161 ~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 161 LFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ccCCCcc------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 5431100 00112345789999999998764 5788999999999999999999999
Q ss_pred CCCChH---------HHHHHHHhC--------------CCCC----------------------CCCCCCCHHHHHHHHH
Q 001869 899 RGKTRQ---------KTFANILHK--------------DLKF----------------------PSSTPTSLHAKQLMYR 933 (1002)
Q Consensus 899 ~~~~~~---------~~~~~i~~~--------------~~~~----------------------~~~~~~s~~~~~Ll~~ 933 (1002)
...... ..+..+... ...+ ......+..+.+||.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 296 (317)
T cd07867 217 HCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQK 296 (317)
T ss_pred ccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHH
Confidence 653221 111111100 0000 0011234568899999
Q ss_pred ccccCcCCCCCChhcHHHHHcCCCc
Q 001869 934 LLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 934 ~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
||+.||.+||| +.|+|+||||
T Consensus 297 ~l~~dP~~R~t----~~e~l~hp~f 317 (317)
T cd07867 297 LLTMDPTKRIT----SEQALQDPYF 317 (317)
T ss_pred HhccCcccccC----HHHHhcCCCC
Confidence 99999999999 9999999998
No 231
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.8e-35 Score=330.75 Aligned_cols=258 Identities=26% Similarity=0.376 Sum_probs=218.0
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-|...+.||+|+||.||+|.+..++..|++|.+.............+.+|+.+++.++|||++++++++.+.+..|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 47777889999999999999999999999999976544445556678889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+ .++|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++....
T Consensus 102 ~~-~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------- 172 (313)
T cd06633 102 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------- 172 (313)
T ss_pred cC-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-------
Confidence 99 56788877654 3458999999999999999999999999999999999999999999999999874211
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
......|+..|+|||++. ...++.++|||||||++|+|++|..||.+.+....
T Consensus 173 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~ 228 (313)
T cd06633 173 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 228 (313)
T ss_pred ------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 112346889999999984 35678899999999999999999999988877666
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
...+.....+......++..+++|+.+||+.+|.+||+ +.++++||||+..+-+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~----~~~~l~~~~~~~~~~~ 282 (313)
T cd06633 229 LYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPA----SAELLRHDFVRRDRPA 282 (313)
T ss_pred HHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCchh
Confidence 66665554433333446778999999999999999999 9999999999975433
No 232
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.6e-35 Score=322.92 Aligned_cols=256 Identities=25% Similarity=0.474 Sum_probs=216.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~lV 747 (1002)
+|++++.||.|+||.||++.+..++..+|+|.+..... .......+..|+.+++.++||||+++++++. .+..+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 48899999999999999999999999999999876433 3445567888999999999999999999875 34678999
Q ss_pred EecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 748 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH-----~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
|||+++++|.+++... ....+++..++.++.||+.||+||| +.+|+|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999998753 2356899999999999999999999 89999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
..... .......|++.|+|||++.+..++.++|+||||+++|+|++|..||..
T Consensus 160 ~~~~~---------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 160 LGHDS---------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccCCc---------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 43110 001234689999999999888889999999999999999999999998
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+.......+...... ......+..+.+++.+||+.+|.+||+ +.++++|||+
T Consensus 213 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~il~~~~~ 265 (265)
T cd08217 213 RNQLQLASKIKEGKFR-RIPYRYSSELNEVIKSMLNVDPDKRPS----TEELLQLPLI 265 (265)
T ss_pred cCHHHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCCcccCCC----HHHHhhCCCC
Confidence 8766665555554332 222356789999999999999999999 9999999996
No 233
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.3e-35 Score=329.67 Aligned_cols=255 Identities=27% Similarity=0.398 Sum_probs=203.5
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|++++.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++|+||+++++++..++..|+||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 589999999999999999999999999999999875432 222335678999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+ +++|..++.... ..++...++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 83 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 156 (291)
T cd07870 83 EYM-HTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP---- 156 (291)
T ss_pred ecc-cCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC----
Confidence 999 477777765442 45788889999999999999999999999999999999999999999999998542211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChH-HH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~-~~ 906 (1002)
........+++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+.. +.
T Consensus 157 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~ 213 (291)
T cd07870 157 -----------------------SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQ 213 (291)
T ss_pred -----------------------CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHH
Confidence 0111233578999999998764 5788999999999999999999999765432 22
Q ss_pred HHHHHhC-CC----------------------CCC-------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 907 FANILHK-DL----------------------KFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 907 ~~~i~~~-~~----------------------~~~-------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
+..+... .. ..+ .....+..+.+++.+||..||.+||| +.+++.||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t----~~~~l~h~ 289 (291)
T cd07870 214 LEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS----AQDALLHP 289 (291)
T ss_pred HHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC----HHHHhcCC
Confidence 2222110 00 000 00123567889999999999999999 99999999
Q ss_pred Cc
Q 001869 957 FF 958 (1002)
Q Consensus 957 ~f 958 (1002)
||
T Consensus 290 ~~ 291 (291)
T cd07870 290 YF 291 (291)
T ss_pred CC
Confidence 98
No 234
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.1e-36 Score=334.21 Aligned_cols=256 Identities=26% Similarity=0.429 Sum_probs=216.1
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||++.+..++..|++|.+... .......+.+|+.+++.++||||+++++++...+..|+|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 6899999999999999999999889999999998643 2233466788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... .++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~--- 169 (293)
T cd06647 96 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (293)
T ss_pred ecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc---
Confidence 999999999998753 47899999999999999999999999999999999999999999999999875432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|++.|+|||.+.+..++.++|+|||||++|++++|..||...+......
T Consensus 170 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~ 225 (293)
T cd06647 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (293)
T ss_pred ------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee
Confidence 11123468899999999988888999999999999999999999998766544433
Q ss_pred HHHh-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 909 NILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 909 ~i~~-~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+.. ....+......+..++++|.+||..+|.+||+ +.++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~h~~~~~~ 275 (293)
T cd06647 226 LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKIA 275 (293)
T ss_pred ehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhcC
Confidence 3322 22223333345778999999999999999999 9999999999874
No 235
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=8.1e-36 Score=339.48 Aligned_cols=255 Identities=28% Similarity=0.433 Sum_probs=211.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
.++|++++.||+|+||.||++.+..++..||||.+.... ........+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 468999999999999999999999999999999986542 23334456788999999999999999999987543
Q ss_pred -eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
.+|+||||+ |++|..++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 468999999 8899888864 35899999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 169 DS------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cc------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 21 1123457889999999876 4578899999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 901 KTRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~-----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..++......+ ....++..+.++|.+||+.||.+||| +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t----~~~ 294 (343)
T cd07880 219 HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT----AAE 294 (343)
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC----HHH
Confidence 776655555443211100 01346778999999999999999999 999
Q ss_pred HHcCCCcCCC
Q 001869 952 IKKHPFFKGV 961 (1002)
Q Consensus 952 lL~Hp~f~~~ 961 (1002)
+++||||+..
T Consensus 295 ~l~~~~~~~~ 304 (343)
T cd07880 295 ALAHPYFEEF 304 (343)
T ss_pred HhcCccHhhh
Confidence 9999999974
No 236
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=9.4e-36 Score=331.03 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=210.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~ 745 (1002)
.+.|++.+.||.|+||.||+|.+..+++.+++|.++..... ......+.+|+.+++.++||||+++++++... +.+|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 35899999999999999999999999999999998754322 22334567899999999999999999998877 8999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999995 59999887643 358999999999999999999999999999999999999999999999999886533110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......+++.|+|||.+.+.. ++.++|||||||++|+|++|.+||......
T Consensus 161 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~ 213 (293)
T cd07843 161 ---------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213 (293)
T ss_pred ---------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 1112345788999999987644 578999999999999999999999887776
Q ss_pred HHHHHHHhCCC-------------C------C---------CCCCC--CCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 905 KTFANILHKDL-------------K------F---------PSSTP--TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 905 ~~~~~i~~~~~-------------~------~---------~~~~~--~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..+.++...-. . + ..... .+..+.+||++||+.||++||| +.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t----~~ell~ 289 (293)
T cd07843 214 DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS----AEDALK 289 (293)
T ss_pred HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC----HHHHhc
Confidence 65555432100 0 0 00111 4778899999999999999999 999999
Q ss_pred CCCc
Q 001869 955 HPFF 958 (1002)
Q Consensus 955 Hp~f 958 (1002)
||||
T Consensus 290 ~~~f 293 (293)
T cd07843 290 HPYF 293 (293)
T ss_pred CCCC
Confidence 9998
No 237
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.2e-35 Score=327.50 Aligned_cols=258 Identities=17% Similarity=0.231 Sum_probs=210.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEcC-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
+..++|++.+.||+|+||.||++.+.. ++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 456789999999999999999998743 35689999886432 23344568889999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEE
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPT--------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~--------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL 812 (1002)
+...++||||+++++|.+++..... ..++...+..++.|++.||+|||++|++|+||||+||+++.++.++|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999999875321 23577888999999999999999999999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHH
Q 001869 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ell 892 (1002)
+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 161 ~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 161 GDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCCCCccccCCcce-------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 99999854321100 00111234678899999999888999999999999999999
Q ss_pred c-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 893 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 893 t-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+ |..||.+......+..+...... +....++..+.+++.+||+.||.+||| +.+++++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 274 (277)
T cd05062 216 TLAEQPYQGMSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIISS 274 (277)
T ss_pred cCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 8 79999888877776666654432 223446788999999999999999999 6666653
No 238
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.5e-36 Score=334.98 Aligned_cols=253 Identities=24% Similarity=0.329 Sum_probs=207.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+...+|++++.||+|+||.||+|.+..++. .||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 345689999999999999999999866655 4899988643 2334456788899999999999999999988764
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..++|+||+.+|+|.+++.... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 5789999999999999997643 45889999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 160 GADEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cCCCcc-------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 321100 00112235678999999999999999999999999999997 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
....+. ..+......++....++..+.+++.+||..||.+||++.+.
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l 261 (316)
T cd05108 215 IPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 261 (316)
T ss_pred CCHHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 766554 45555555556566678899999999999999999994443
No 239
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.2e-35 Score=329.25 Aligned_cols=273 Identities=42% Similarity=0.743 Sum_probs=220.5
Q ss_pred CcccccccccCCcEEEEEEEEc---CCCeEEEEEEeecccccC-hhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
.|++.+.||.|+||.||++.+. .++..||||++++..... ......+.+|+.++.++ +||||+.+++++..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4788999999999999999864 457899999987543222 23345677899999999 699999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.+++|.+++... ..+++..++.++.|++.+|.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998754 45899999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. ........|++.|+|||.+.+.. .+.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 159 E--------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred c--------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 0 01112346889999999987654 6789999999999999999999996432
Q ss_pred ----hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCC
Q 001869 903 ----RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 973 (1002)
Q Consensus 903 ----~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~ 973 (1002)
..+....+....... ...++..+.++|.+||+.||++|||+. .+.++|+||||+.++|+.+...+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~R~t~~-~~~~~l~~~~~~~~~~~~~~~~~~~~ 284 (288)
T cd05583 213 EQNSQSEISRRILKSKPPF--PKTMSAEARDFIQKLLEKDPKKRLGAN-GADEIKNHPFFQGIDWDDLAAKRIPA 284 (288)
T ss_pred ccchHHHHHHHHHccCCCC--CcccCHHHHHHHHHHhcCCHhhccCcc-hHHHHhcCcccccCCHHHHhhhccCC
Confidence 223333333333333 334678899999999999999999844 46889999999999999886666653
No 240
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-35 Score=325.47 Aligned_cols=251 Identities=29% Similarity=0.410 Sum_probs=208.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||.|+||.||++.+..+++.+|||.+.............+.+|+.+++.++||||+++++++...+..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999887654445555678889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+++++|.+++... ....+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 999999999988642 23468999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 904 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~--~ 904 (1002)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||.+... .
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence 011234688999999999888899999999999999999999999976543 2
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
.....+.............+..+.+||.+||..||.+|||+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 256 (267)
T cd08229 215 SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDIT 256 (267)
T ss_pred HHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHH
Confidence 333333332222112234678899999999999999999944
No 241
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8.3e-36 Score=325.30 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=212.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..+|++++.||.|+||.||+|.+.. +..+++|++... .......+..|+.+++.++||||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD---DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc---chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3579999999999999999999977 889999998754 233455678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 999999999999987666678999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
.......++..|+|||++.+..++.++||||||+++|+|++ |..||.+.+..+.
T Consensus 159 -------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~ 213 (261)
T cd05148 159 -------------------------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV 213 (261)
T ss_pred -------------------------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 00112345778999999988889999999999999999998 8999988887777
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
+..+... ...+....++..+.+++.+||+.||.+|||+.+.
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l 254 (261)
T cd05148 214 YDQITAG-YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKAL 254 (261)
T ss_pred HHHHHhC-CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 7766643 3444455678899999999999999999994443
No 242
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.2e-35 Score=325.95 Aligned_cols=248 Identities=31% Similarity=0.494 Sum_probs=200.7
Q ss_pred CCccccccc--ccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001869 669 QHFRPIKPL--GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 669 ~~y~i~~~L--G~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
+.|++.+.+ |.|+||.||++.+..++..+|+|.+....... .|+.+...+ +||||++++++|...+..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 466666666 99999999999999999999999987542211 122233323 7999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-cEEEEeccCCcccCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~~ 824 (1002)
+||||+++++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||+++.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 999999999999999765 3699999999999999999999999999999999999999988 999999998854321
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 163 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 212 (267)
T PHA03390 163 ------------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE 212 (267)
T ss_pred ------------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 11235889999999999988999999999999999999999999765432
Q ss_pred HH-HHHHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 905 KT-FANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 ~~-~~~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.. ...+... ....+.....+..+.+||.+||+.||.+||+. ++++|+||||++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~~l~h~~~~~ 267 (267)
T PHA03390 213 ELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTN---YNEIIKHPFLKI 267 (267)
T ss_pred hhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCch---HHHHhcCCcccC
Confidence 21 1111111 11222333578999999999999999999961 699999999974
No 243
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-35 Score=322.58 Aligned_cols=250 Identities=24% Similarity=0.369 Sum_probs=207.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++.+.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence 457999999999999999999875 45679999876432 2235678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++.... ..++...+..++.|++.||+|||++||+|+||||+||+++.++.+||+|||.+........
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05114 78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY- 155 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-
Confidence 99999999999987543 3589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
.......++..|+|||++.+..++.++||||||+++|+|++ |+.||...+..+.
T Consensus 156 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~ 210 (256)
T cd05114 156 -------------------------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV 210 (256)
T ss_pred -------------------------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 00112235678999999988889999999999999999999 9999998888777
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+..+...... ......+..+.+|+.+||+.+|.+||+ +.++++
T Consensus 211 ~~~i~~~~~~-~~~~~~~~~~~~li~~c~~~~p~~Rps----~~~l~~ 253 (256)
T cd05114 211 VEMISRGFRL-YRPKLASMTVYEVMYSCWHEKPEGRPT----FAELLR 253 (256)
T ss_pred HHHHHCCCCC-CCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 7777665322 223346778999999999999999999 666654
No 244
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-35 Score=329.45 Aligned_cols=257 Identities=29% Similarity=0.460 Sum_probs=211.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ........+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 36999999999999999999999999999999887542 23344567889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.++.+..+.... ..++...+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 80 EYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 999887776655443 4489999999999999999999999999999999999999999999999999855331110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......+++.|+|||++.+. .++.++||||||+++|+|++|.+||.+....+.+
T Consensus 156 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 211 (288)
T cd07833 156 ------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL 211 (288)
T ss_pred ------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 112235688999999999887 7889999999999999999999999877665444
Q ss_pred HHHHhCC-------------------CCCCC-----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 908 ANILHKD-------------------LKFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 908 ~~i~~~~-------------------~~~~~-----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
..+.... ..++. ...++.++.+||++||..+|++||+ ++++++|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~ 287 (288)
T cd07833 212 YLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT----CDELLQHPY 287 (288)
T ss_pred HHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc----HHHHhcCCC
Confidence 3332100 00000 1123778999999999999999999 999999999
Q ss_pred c
Q 001869 958 F 958 (1002)
Q Consensus 958 f 958 (1002)
|
T Consensus 288 f 288 (288)
T cd07833 288 F 288 (288)
T ss_pred C
Confidence 8
No 245
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=6.4e-36 Score=338.36 Aligned_cols=289 Identities=24% Similarity=0.362 Sum_probs=229.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (1002)
+|++.+.||.|+||.||+|.+..++..||||.+.... ........+.+|+.+++.++||||+++++++...+ .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5889999999999999999999899999999987642 22445567888999999999999999999988765 88
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999995 6899888764 36999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
... ........+++.|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+.
T Consensus 157 ~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~ 212 (330)
T cd07834 157 EDE------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY 212 (330)
T ss_pred ccc------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH
Confidence 100 0112234688999999999887 788899999999999999999999998887
Q ss_pred HHHHHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 904 QKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~-----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.+.+..+.......+ .....+..+.+||.+||+++|.+||+ +.++++
T Consensus 213 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~ 288 (330)
T cd07834 213 IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT----ADEALA 288 (330)
T ss_pred HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC----HHHHHh
Confidence 766665554211000 01235678899999999999999999 999999
Q ss_pred CCCcCCCChhhhhccCCCCCCCCCCCCcc--ccccccCChhhHHH
Q 001869 955 HPFFKGVNWALVRCMNPPELDAPLFATDT--EKEYKVVDPGMQDL 997 (1002)
Q Consensus 955 Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~ 997 (1002)
||||+++.- ++....+....+. .+++..+.++.+++
T Consensus 289 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (330)
T cd07834 289 HPYLAQLHD-------PEDEPVAKPPFDFDFFDDDELTEEELKEL 326 (330)
T ss_pred CccHHhhcc-------cccCCCCCCcccccccchhhcCHHHHhHH
Confidence 999997432 2222222233333 66666666665554
No 246
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.1e-35 Score=328.59 Aligned_cols=255 Identities=25% Similarity=0.423 Sum_probs=210.4
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|++++.||.|++|.||+|.+..+|..||+|++..... .......+.+|+.+++.++|||++++++++.+.+..|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999875432 222335677899999999999999999999999999999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+ +++|.+++.......+++..+..++.||+.||+|||+++++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~------ 152 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP------ 152 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC------
Confidence 9 578999987765456899999999999999999999999999999999999999999999999998543211
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
........+++.|+|||++.+. .++.++|||||||++|+|++|++||...+....+..
T Consensus 153 ---------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 211 (283)
T cd07835 153 ---------------------VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR 211 (283)
T ss_pred ---------------------ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0011223568899999988664 568899999999999999999999988776555444
Q ss_pred HHhCCC------------------CCC---------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 910 ILHKDL------------------KFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~------------------~~~---------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+.+... .++ ....++..+.++|.+||+.||.+||| ++++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~ 283 (283)
T cd07835 212 IFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS----AKAALQHPYF 283 (283)
T ss_pred HHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC----HHHHhcCCCC
Confidence 432100 000 12345678999999999999999999 9999999998
No 247
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=343.22 Aligned_cols=261 Identities=23% Similarity=0.336 Sum_probs=225.4
Q ss_pred ccccccccCCcccccccccCCcEEEEEEEEcCCC----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEE
Q 001869 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 736 (1002)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 736 (1002)
...|++..++-.+.+.||+|+||.||++.....+ ..||+|..+............+.+|+++|+.++|||||++|+
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 3456677788888899999999999999986542 238999988655566788899999999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEecc
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
+......+|+|||+|.||+|.++|++.+. .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccc
Confidence 99999999999999999999999998753 59999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccc-cccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-C
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 894 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G 894 (1002)
+++....- .... ..--...|+|||.+....|+.++|||||||++||+++ |
T Consensus 308 Ls~~~~~~----------------------------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g 359 (474)
T KOG0194|consen 308 LSRAGSQY----------------------------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG 359 (474)
T ss_pred cccCCcce----------------------------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccC
Confidence 98543200 0000 1124568999999999999999999999999999997 8
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 895 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
..||.+....+...++....+..+.....+.++..++.+||..||+.||++....+
T Consensus 360 ~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 360 AEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred CCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 99999999999999998877777776677889999999999999999999765443
No 248
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.3e-35 Score=328.10 Aligned_cols=255 Identities=24% Similarity=0.425 Sum_probs=209.6
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++++.||.|++|.||+|.+..++..||||++..... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 48899999999999999999999999999999876432 2233566789999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 750 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+. ++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+||++++++.++|+|||++......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~---- 153 (284)
T cd07836 79 YMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP---- 153 (284)
T ss_pred cCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC----
Confidence 996 58888876532 245899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
........+++.|++||++.+. .++.++|||||||++|+|++|..||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 210 (284)
T cd07836 154 -----------------------VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL 210 (284)
T ss_pred -----------------------ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 0111234578899999998664 5678999999999999999999999887776655
Q ss_pred HHHHhCC------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHKD------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+.... ..++. ....+..+.++|.+||+.||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~f 284 (284)
T cd07836 211 LKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS----AHDALQHPWF 284 (284)
T ss_pred HHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 5543210 00000 0234678899999999999999999 9999999998
No 249
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-35 Score=327.46 Aligned_cols=258 Identities=22% Similarity=0.347 Sum_probs=210.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEc----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+..++|++.+.||+|+||.||+|.+. .++..+++|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 79 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE 79 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC
Confidence 34568999999999999999999863 45678999998753 2334456788899999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc
Q 001869 742 THVCLITDYCPGGELFLLLDRQP---------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~---------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~ 806 (1002)
+..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE 159 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence 99999999999999999985321 124788899999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHH
Q 001869 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (1002)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGv 886 (1002)
++.+||+|||++........ ........++..|+|||++.+..++.++|||||||
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05090 160 QLHVKISDLGLSREIYSADY-------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGV 214 (283)
T ss_pred CCcEEeccccccccccCCcc-------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHH
Confidence 99999999999865321110 01112334677899999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 887 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 887 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
++|+|++ |..||.+.........+... ...+....++..+.+++.+||+.||.+||+ +.+|+++
T Consensus 215 il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~i~~~ 279 (283)
T cd05090 215 VLWEIFSFGLQPYYGFSNQEVIEMVRKR-QLLPCSEDCPPRMYSLMTECWQEGPSRRPR----FKDIHTR 279 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHHH
Confidence 9999998 99999887766555544433 333444557889999999999999999999 6666543
No 250
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.3e-35 Score=320.10 Aligned_cols=256 Identities=31% Similarity=0.538 Sum_probs=221.0
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||++.+..++..|++|.+..... .......+..|+++++.++|||++++++.+...+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58899999999999999999998999999999876432 33556678889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 750 YCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|+++++|.+++.... ...++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 999999999997643 3669999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~ 212 (258)
T cd08215 158 -------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELA 212 (258)
T ss_pred -------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 1122346899999999998888899999999999999999999999888777766
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.......... ....++..+.+++.+||..+|.+||| +.++|+||||
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 258 (258)
T cd08215 213 LKILKGQYPP-IPSQYSSELRNLVSSLLQKDPEERPS----IAQILQSPFI 258 (258)
T ss_pred HHHhcCCCCC-CCCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCCCC
Confidence 6666554322 22357789999999999999999999 9999999997
No 251
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.4e-36 Score=338.57 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=210.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----Ce
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----TH 743 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~ 743 (1002)
++|++++.||+|+||.||++.+..+++.||||.+.... ........+.+|+.+++.++|+||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 57999999999999999999999999999999987542 2333455677899999999999999999988644 35
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+ +++|.+++... ..+++..+..++.||+.||.|||+++++|+||||+||+++.++.+||+|||++.....
T Consensus 84 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 89999999 57899888754 4599999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. .......|+..|+|||.+.. ..++.++|||||||++|+|++|+.||.+.+
T Consensus 161 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 213 (337)
T cd07858 161 KG---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD 213 (337)
T ss_pred Cc---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC
Confidence 10 01123467889999999865 468889999999999999999999998766
Q ss_pred hHHHHHHHHhC-----------------------CCCC------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 903 RQKTFANILHK-----------------------DLKF------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~~-----------------------~~~~------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
....+..+... .... .....++..+.+||++||+.||.+||| +++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps----~~ell 289 (337)
T cd07858 214 YVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT----VEEAL 289 (337)
T ss_pred hHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC----HHHHH
Confidence 54433322210 0000 011346788999999999999999999 99999
Q ss_pred cCCCcCCC
Q 001869 954 KHPFFKGV 961 (1002)
Q Consensus 954 ~Hp~f~~~ 961 (1002)
+||||+.+
T Consensus 290 ~h~~~~~~ 297 (337)
T cd07858 290 AHPYLASL 297 (337)
T ss_pred cCcchhhh
Confidence 99999875
No 252
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.2e-35 Score=327.44 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=209.6
Q ss_pred cccCCcccccccccCCcEEEEEEEE-----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
++.+.|.+.+.||+|+||.||++.+ ..++..+|+|.+... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 3456899999999999999999985 234667999988643 34456678899999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~-----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~ 809 (1002)
.+.+|+||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999987532 124899999999999999999999999999999999999999999
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHH
Q 001869 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ 889 (1002)
+||+|||++........ ........+++.|+|||++.+..++.++|||||||++|
T Consensus 159 ~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~ 213 (288)
T cd05093 159 VKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 213 (288)
T ss_pred EEeccCCccccccCCce-------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 99999999864321100 01112234678899999999888999999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 890 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 890 ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
+|++ |..||...........+..+... +.....+..+.+|+.+||+.||.+|||+.
T Consensus 214 ~l~t~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 270 (288)
T cd05093 214 EIFTYGKQPWYQLSNNEVIECITQGRVL-QRPRTCPKEVYDLMLGCWQREPHMRLNIK 270 (288)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 9998 99999888877777777665432 22334678999999999999999999933
No 253
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.7e-35 Score=326.32 Aligned_cols=254 Identities=28% Similarity=0.420 Sum_probs=215.9
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-|++++.||.|+||.||++.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 4788999999999999999998899999999876432 23345678889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|..++.. ..++...+..++.|++.+|.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06641 83 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch----
Confidence 9999999999864 358999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........
T Consensus 156 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 212 (277)
T cd06641 156 -----------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212 (277)
T ss_pred -----------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence 011234688899999999888888999999999999999999999987776655555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.....+ .....++.++.+++.+||+.+|.+||+ +.++++||||..
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~~~ 258 (277)
T cd06641 213 IPKNNPP-TLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFIVR 258 (277)
T ss_pred HhcCCCC-CCCcccCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhh
Confidence 5433222 122346788999999999999999999 999999999986
No 254
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=6.8e-36 Score=331.19 Aligned_cols=262 Identities=24% Similarity=0.352 Sum_probs=209.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~l 746 (1002)
.++|..++.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.++.++. ||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3578888999999999999999999999999999875432 244567788999999985 9999999999999999999
Q ss_pred EEecCCCCcHHHHH---hhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 747 ITDYCPGGELFLLL---DRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 747 V~E~~~ggsL~~~l---~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
+|||+. ++|.++. .......+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 999994 5555443 222335699999999999999999999985 99999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
.. .......|++.|+|||++.+. .++.++|||||||++|+|++|+.||.
T Consensus 160 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 160 DS----------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cC----------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 10 011223588899999999776 67889999999999999999999997
Q ss_pred CCCh-HHHHHHHHhCCC-CCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 900 GKTR-QKTFANILHKDL-KFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 900 ~~~~-~~~~~~i~~~~~-~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
.... .+.+..+..... ..+ ....++.++.+||.+||+.||.+||| ++++++||||+...+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~i~~~~~~~~~~~~ 276 (288)
T cd06616 212 KWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK----YKELLEHPFIKDYEER 276 (288)
T ss_pred hcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcChhhhchhhc
Confidence 6542 222233332221 111 12347889999999999999999999 9999999999875443
No 255
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.6e-35 Score=327.91 Aligned_cols=261 Identities=28% Similarity=0.449 Sum_probs=222.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++.+.||.|++|.||++.+..++..+++|++..... ....+.+|+++++.++|+||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4579999999999999999999988899999999875422 456778899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
+||+++++|.+++.... ..++...+..++.|++.||+|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-- 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-- 170 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--
Confidence 99999999999998753 369999999999999999999999999999999999999999999999999874432110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......+++.|+|||.+.+..++.++|+|||||++|+|++|..||...+.....
T Consensus 171 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~ 225 (286)
T cd06614 171 -------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL 225 (286)
T ss_pred -------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112345788999999998888899999999999999999999999887766655
Q ss_pred HHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 908 ANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 908 ~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
..+...... ......++..+++||.+||+.+|.+||+ +.++++||||+...|.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~~~~ 279 (286)
T cd06614 226 FLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS----AEELLQHPFLKKACPK 279 (286)
T ss_pred HHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC----HHHHhhChHhhccCch
Confidence 555444332 2223336788999999999999999999 9999999999985443
No 256
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.5e-35 Score=326.24 Aligned_cols=258 Identities=19% Similarity=0.248 Sum_probs=212.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+..++|++.+.||+|+||.||++.+... +..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 45677999999999999999999998644 4889999986542 2334456788999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEE
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
.....|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 9999999999999999999987532 12467889999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||++........ ........++..|+|||.+.+..++.++|||||||++|++
T Consensus 160 l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 214 (277)
T cd05032 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214 (277)
T ss_pred ECCcccchhhccCcc-------------------------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHh
Confidence 999999854321100 0112234567899999999888899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 892 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++ |..||.+.+.......+.... ..+....++..+.+|+.+||+.+|++||| +.++++
T Consensus 215 ~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~~ 273 (277)
T cd05032 215 ATLAEQPYQGLSNEEVLKFVIDGG-HLDLPENCPDKLLELMRMCWQYNPKMRPT----FLEIVS 273 (277)
T ss_pred hccCCCCCccCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 98 999998888777666665332 23333446889999999999999999999 666653
No 257
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.9e-35 Score=330.35 Aligned_cols=258 Identities=22% Similarity=0.328 Sum_probs=212.8
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 738 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 738 (1002)
.+..++|.+.+.||+|+||.||++.+. .++..+|+|+++... .......+.+|+.+++++ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 355678999999999999999999862 345689999887542 233456788999999999 799999999999
Q ss_pred EeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
...+.+|+||||+.+++|.+++.......++...+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999999997654445899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~P 897 (1002)
........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 189 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p 243 (302)
T cd05055 189 RDIMNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNP 243 (302)
T ss_pred ccccCCCc-------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54321100 001123356788999999999889999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
|.+......+..........+.....+..+.+|+.+||..+|++||| +.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ell 295 (302)
T cd05055 244 YPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPT----FKQIV 295 (302)
T ss_pred cCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHH
Confidence 98877665555555554444444456889999999999999999999 55554
No 258
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=8.3e-36 Score=337.29 Aligned_cols=262 Identities=23% Similarity=0.320 Sum_probs=207.3
Q ss_pred cccccC--CcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCC
Q 001869 675 KPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G--~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
..||.| +||+||++.+..+|+.||+|++..... .....+.+.+|+.+++.++||||++++++|..++..|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 456666 999999999999999999999875432 23445778889999999999999999999999999999999999
Q ss_pred CCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcc
Q 001869 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
+++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~----- 157 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK----- 157 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc-----
Confidence 999999998754456899999999999999999999999999999999999999999999999865332110000
Q ss_pred hhhhhcccCCCCCccccccCcccccccCCCcccccccccCC--CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001869 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i 910 (1002)
... .........++..|+|||++.+. .++.++|||||||++|+|++|..||.+......+...
T Consensus 158 -----------~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~ 222 (328)
T cd08226 158 -----------AKV----VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQK 222 (328)
T ss_pred -----------ccc----cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHH
Confidence 000 00001112356779999999764 4678999999999999999999999887665554444
Q ss_pred HhCCCC---------------------------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001869 911 LHKDLK---------------------------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 911 ~~~~~~---------------------------------------------~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
+..... .+....++..+.+||++||+.||++|||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt- 301 (328)
T cd08226 223 LKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPS- 301 (328)
T ss_pred hcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCC-
Confidence 332111 1111234667899999999999999999
Q ss_pred hhcHHHHHcCCCcCCC
Q 001869 946 HEGANEIKKHPFFKGV 961 (1002)
Q Consensus 946 ~~~a~elL~Hp~f~~~ 961 (1002)
+.++|+||||+.+
T Consensus 302 ---a~e~l~~~~~~~~ 314 (328)
T cd08226 302 ---ASSLLSHAFFKQV 314 (328)
T ss_pred ---HHHHhhCHHHHHH
Confidence 9999999999874
No 259
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.6e-35 Score=331.47 Aligned_cols=261 Identities=25% Similarity=0.361 Sum_probs=205.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
.++|++++.||+|+||.||+|.+..+++.||||.+..... .......+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 4589999999999999999999999999999999865422 2222334567999999999999999999886543
Q ss_pred ---eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 743 ---HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 743 ---~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
..|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 90 YKGSFYLVFEFC-EHDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCceEEEEEcCC-CcCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 469999999 46888887654 2358999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
........ .........++..|+|||.+.+.. ++.++||||||+++|+|++|..||
T Consensus 168 ~~~~~~~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 168 AFSLSKNS-----------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cccCCccc-----------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 54321100 001112346789999999986653 678999999999999999999999
Q ss_pred CCCChHHHHHHHHh--CCC-----------------CCCC-----------CCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 899 RGKTRQKTFANILH--KDL-----------------KFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~--~~~-----------------~~~~-----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.+.+.......+.. +.+ .++. ....+..+.+||.+||+.||.+|||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t---- 300 (310)
T cd07865 225 QGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID---- 300 (310)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC----
Confidence 88766544333222 100 0110 0113567789999999999999999
Q ss_pred HHHHHcCCCc
Q 001869 949 ANEIKKHPFF 958 (1002)
Q Consensus 949 a~elL~Hp~f 958 (1002)
++++++||||
T Consensus 301 ~~e~l~h~~f 310 (310)
T cd07865 301 ADTALNHDFF 310 (310)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 260
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.1e-35 Score=325.84 Aligned_cols=251 Identities=26% Similarity=0.458 Sum_probs=203.4
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC--CeEEEE
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTK--THVCLI 747 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~--~~~~lV 747 (1002)
|++++.||+|+||.||++.+..+++.||+|.++.... .... .....|+.+++++. |+||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7788999999999999999999999999999875422 2222 23456888888884 99999999999987 899999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+||+++. +.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~--- 152 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK--- 152 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC---
Confidence 99995 58888876542 46899999999999999999999999999999999999999 99999999998543211
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......+++.|+|||++.. ..++.++|||||||++|+|++|..||.+.+..+.
T Consensus 153 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~ 207 (282)
T cd07831 153 -------------------------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207 (282)
T ss_pred -------------------------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence 01112457889999998644 5567899999999999999999999988776655
Q ss_pred HHHHHhC------------------CCCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~------------------~~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+..+... ...++. ....+..+.+||.+||+++|.+||+ +.++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~~~~ 282 (282)
T cd07831 208 IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT----AKQALRHPYF 282 (282)
T ss_pred HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC----HHHHhhCCCC
Confidence 5444321 111111 1235788999999999999999999 9999999998
No 261
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.2e-35 Score=333.47 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=205.6
Q ss_pred CcccccccccCCcEEEEEEEEcC--CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~ 745 (1002)
+|++.+.||+|+||.||+|.+.. ++..||+|.+.............+.+|+.+++.++||||+++++++.+. +.+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48899999999999999999988 8999999999875322333446677899999999999999999999988 8899
Q ss_pred EEEecCCCCcHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc----CCcEEEEeccCC
Q 001869 746 LITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLS 818 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~----~g~vkL~DFG~a 818 (1002)
+||||+. ++|.+++... ....+++..++.++.||+.||.|||+++|+||||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 5677766532 1236899999999999999999999999999999999999999 899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~P 897 (1002)
......... ........+++.|+|||++.+. .++.++|||||||++|+|++|.+|
T Consensus 160 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 160 RLFNAPLKP------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred cccCCCccc------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 654321100 0112345689999999988764 578899999999999999999999
Q ss_pred CCCCChHH---------HHHHHHh--------------------------CCCCCCC---------CCCCCHHHHHHHHH
Q 001869 898 FRGKTRQK---------TFANILH--------------------------KDLKFPS---------STPTSLHAKQLMYR 933 (1002)
Q Consensus 898 f~~~~~~~---------~~~~i~~--------------------------~~~~~~~---------~~~~s~~~~~Ll~~ 933 (1002)
|.+..... .+..++. ....++. ....+..+.++|.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 295 (316)
T cd07842 216 FKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK 295 (316)
T ss_pred CcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHH
Confidence 97654321 1111110 0001110 01456788999999
Q ss_pred ccccCcCCCCCChhcHHHHHcCCCc
Q 001869 934 LLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 934 ~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
||+.||.+||| +.++++||||
T Consensus 296 ~l~~~P~~Rps----~~eil~~~~f 316 (316)
T cd07842 296 LLEYDPTKRIT----AEEALEHPYF 316 (316)
T ss_pred HhcCCcccCcC----HHHHhcCCCC
Confidence 99999999999 9999999998
No 262
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.5e-35 Score=321.82 Aligned_cols=248 Identities=25% Similarity=0.349 Sum_probs=208.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|++|.||+|.+. +++.||+|.++.... ....+.+|+.++++++||||+++++++...+.+|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 45678999999999999999999974 457899999875422 2456788999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++.......++...+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999977655568999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
........++..|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..
T Consensus 158 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 211 (261)
T cd05068 158 --------------------------YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA 211 (261)
T ss_pred --------------------------ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 000111223467999999998889999999999999999998 99999988777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
..+..+... ...+....++..+.+++.+||+.+|.+||++
T Consensus 212 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~ 251 (261)
T cd05068 212 EVLQQVDQG-YRMPCPPGCPKELYDIMLDCWKEDPDDRPTF 251 (261)
T ss_pred HHHHHHHcC-CCCCCCCcCCHHHHHHHHHHhhcCcccCCCH
Confidence 666665443 3344445678899999999999999999993
No 263
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4e-35 Score=330.04 Aligned_cols=255 Identities=26% Similarity=0.389 Sum_probs=218.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|...+.||+|+||.||++.+..++..+|+|.+.............+.+|+.+++.++|||++++++++...+..|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 35889999999999999999999999999999987654444455667889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+. |+|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 105 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----- 177 (317)
T cd06635 105 EYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----- 177 (317)
T ss_pred eCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence 9995 5787777543 34589999999999999999999999999999999999999999999999998743211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....|++.|+|||++. ...++.++|||||||++|+|++|..||...+...
T Consensus 178 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 231 (317)
T cd06635 178 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 231 (317)
T ss_pred --------------------------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 12346888999999974 3567889999999999999999999998887777
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
....+.............+..+.+||.+||+.+|.+||+ +.++++|+|+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~ 282 (317)
T cd06635 232 ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPT----SEELLKHMFVLR 282 (317)
T ss_pred HHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcC----HHHHHhChhhhc
Confidence 777776655444444456788999999999999999999 999999999975
No 264
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.1e-35 Score=337.48 Aligned_cols=260 Identities=25% Similarity=0.416 Sum_probs=208.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (1002)
.++|++.+.||+|+||.||++.+..+|+.||+|.+... ........+..|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 36899999999999999999999999999999998642 2233456677899999999999999999887643 3
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+|+||+ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 82 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 DVYIVQELM-ETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred eEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 689999999 4588887754 458999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.... .........|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 158 ~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~ 213 (336)
T cd07849 158 PEHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK 213 (336)
T ss_pred cccc------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1100 0001123578999999998754 56788999999999999999999999876
Q ss_pred ChHHHHHHHHhC---------------C-------CCCC-------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 902 TRQKTFANILHK---------------D-------LKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~~~~~~~~i~~~---------------~-------~~~~-------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+.......+... . .... .....+.++.+||.+||+.||.+||| +.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~e~ 289 (336)
T cd07849 214 DYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT----VEEA 289 (336)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC----HHHH
Confidence 654433322110 0 0000 01234678899999999999999999 9999
Q ss_pred HcCCCcCCC
Q 001869 953 KKHPFFKGV 961 (1002)
Q Consensus 953 L~Hp~f~~~ 961 (1002)
++||||+..
T Consensus 290 l~hp~~~~~ 298 (336)
T cd07849 290 LAHPYLEQY 298 (336)
T ss_pred hcCcccccc
Confidence 999999975
No 265
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.7e-35 Score=322.02 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=205.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|+||.||+|.+..++ .+|+|++..... ....+.+|+.+++.++||||+++++++.. +..|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcE
Confidence 45678999999999999999999986654 599999875322 23567889999999999999999998754 5689
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++.......++...+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||.+.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999999986545568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred --------------------------cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 001112346778999999988889999999999999999999 89999888777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
..+..+... ...+....++..+.+|+.+||+.||.+||++.
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~ 251 (262)
T cd05071 211 EVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPTFE 251 (262)
T ss_pred HHHHHHhcC-CCCCCccccCHHHHHHHHHHccCCcccCCCHH
Confidence 666655443 23344455788899999999999999999943
No 266
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.6e-35 Score=320.35 Aligned_cols=259 Identities=25% Similarity=0.365 Sum_probs=215.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccc--ccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 744 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~ 744 (1002)
..|++.+.||+|+||.||++.+..+++.||+|.+.... .........+.+|+.+++.++||||+++++++.+. +.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 36999999999999999999999999999999875431 12334566888999999999999999999998763 568
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 9999999999999998764 34889999999999999999999999999999999999999999999999998643210
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.. .........|+..|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 215 (264)
T cd06653 160 CM------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM 215 (264)
T ss_pred cc------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH
Confidence 00 000112356899999999999888899999999999999999999999887766
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
....++.............+..+.++|.+||. +|..||+ +.+++.|||.
T Consensus 216 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~----~~~~~~~~~~ 264 (264)
T cd06653 216 AAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPT----AEFLLRHPFV 264 (264)
T ss_pred HHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCcc----HHHHhcCCCC
Confidence 66665554433322334578899999999999 5799999 9999999984
No 267
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.9e-35 Score=321.57 Aligned_cols=252 Identities=26% Similarity=0.393 Sum_probs=204.0
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.+.....||+|+||.||++.+..++..|++|.+... .......+.+|+.+++.++|+||+++++++..++.+|+|||
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 344446799999999999999999999999988654 33455678899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEEeccCCcccCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~~ 826 (1002)
|+++++|.+++.... ..+ +...+..++.||+.||+|||++||+||||||+||+++. ++.++|+|||++.......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~- 163 (268)
T cd06624 86 QVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN- 163 (268)
T ss_pred cCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC-
Confidence 999999999997642 234 78889999999999999999999999999999999986 6799999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......|++.|+|||++.+.. ++.++||||||+++|+|++|..||......
T Consensus 164 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~ 217 (268)
T cd06624 164 --------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP 217 (268)
T ss_pred --------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 0111235789999999986643 678999999999999999999999764332
Q ss_pred HH-HHHHH--hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 905 KT-FANIL--HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 905 ~~-~~~i~--~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.. ..... .....+ ...++.++.+|+.+||+.+|.+||| +.+++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 268 (268)
T cd06624 218 QAAMFKVGMFKIHPEI--PESLSAEAKNFILRCFEPDPDKRAS----AHDLLQDPFL 268 (268)
T ss_pred hhhHhhhhhhccCCCC--CcccCHHHHHHHHHHcCCCchhCCC----HHHHHhCCCC
Confidence 21 11111 111122 2346788999999999999999999 9999999997
No 268
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.7e-37 Score=315.60 Aligned_cols=263 Identities=29% Similarity=0.469 Sum_probs=209.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCC----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CC
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KT 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~ 742 (1002)
+..|++++.||+|.||.||+|....++ +.||||.++.... .........+|+.+++.++||||+.+..+|-. ..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 458999999999999999999664442 3789998875422 12223456789999999999999999999977 78
Q ss_pred eEEEEEecCCCCcHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC----CcEEEEec
Q 001869 743 HVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDF 815 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~----g~vkL~DF 815 (1002)
.+++++||. --+|++.++.. ....++...++.++.||+.|+.|||++-|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999999 56888888742 23569999999999999999999999999999999999999987 89999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcC
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG 894 (1002)
|+++.+... ..+....+.++-|.+|+|||.|.|. .|+.+.|||+.|||+.||++-
T Consensus 181 GlaR~~~~p------------------------lkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 181 GLARLFNNP------------------------LKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred cHHHHhhcc------------------------ccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 999876432 1233345667899999999999886 467899999999999999999
Q ss_pred CCCCCCCC---------hHHHHHHHHhC-----CCCCCCC------------------------------CCCCHHHHHH
Q 001869 895 YTPFRGKT---------RQKTFANILHK-----DLKFPSS------------------------------TPTSLHAKQL 930 (1002)
Q Consensus 895 ~~Pf~~~~---------~~~~~~~i~~~-----~~~~~~~------------------------------~~~s~~~~~L 930 (1002)
++.|.+.. ..+.+.+|..- .-.||.. ..-++...+|
T Consensus 237 ~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~L 316 (438)
T KOG0666|consen 237 EPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDL 316 (438)
T ss_pred CccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHH
Confidence 99996632 12344444331 0111110 1123346799
Q ss_pred HHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 931 MYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 931 l~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
|.+||.+||.+|+| ++++|+|+||+.
T Consensus 317 L~klL~yDP~kRIt----a~qAleh~yF~~ 342 (438)
T KOG0666|consen 317 LQKLLTYDPIKRIT----AEQALEHPYFTE 342 (438)
T ss_pred HHHHhccCchhhcc----HHHHhccccccc
Confidence 99999999999999 999999999997
No 269
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.7e-35 Score=330.89 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=207.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeE--EEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
+..++|++.+.||+|+||.||+|.+..++.. +++|.+... ........+.+|+.++.++ +||||+++++++...+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 4567899999999999999999999777754 567765532 2344556788899999999 8999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC
Q 001869 743 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g 808 (1002)
.+|+||||+++++|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999997532 23578999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHH
Q 001869 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
.+||+|||++...... .......++..|+|||++.+..++.++|||||||++
T Consensus 162 ~~kl~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 162 VAKIADFGLSRGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred cEEeCccccCcccchh----------------------------hhcccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 9999999987421100 001112346679999999888889999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 889 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|+|++ |..||.+.+..+....+... .........+..+.+|+.+||+.+|.+||+ +.+++++
T Consensus 214 ~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~ 276 (303)
T cd05088 214 WEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 276 (303)
T ss_pred HHHHhcCCCCcccCChHHHHHHHhcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 99998 99999887776666555332 233333446788999999999999999999 6666554
No 270
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.2e-35 Score=320.56 Aligned_cols=251 Identities=28% Similarity=0.409 Sum_probs=208.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++.+.||+|+||.||+|.+..+++.||+|.++............+.+|+.++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57999999999999999999999899999999987654445555778889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||+++++|..++... ....++...+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 999999999998642 23458999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--hH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQ 904 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~--~~ 904 (1002)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||.... ..
T Consensus 161 --------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08224 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence 01123468889999999998889999999999999999999999996543 22
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
.....+..+..........+..+.++|.+||..+|++|||+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~ 256 (267)
T cd08224 215 SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDIS 256 (267)
T ss_pred HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHH
Confidence 333333333222111224677899999999999999999943
No 271
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.2e-35 Score=320.74 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=208.1
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.++++++|+||+++++++. .+..
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence 355678999999999999999999875 566799999876432 2346888999999999999999999875 4568
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.+++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999999999997655556899999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
. ........++..|+|||++.+..++.++||||||+++|+|++ |.+||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 209 (260)
T cd05070 156 E--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 209 (260)
T ss_pred c--------------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 0 001112235678999999988889999999999999999999 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.+....+... ...+.....+..+.+|+.+||..+|.+||| +.++.
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~ 254 (260)
T cd05070 210 REVLEQVERG-YRMPCPQDCPISLHELMLQCWKKDPEERPT----FEYLQ 254 (260)
T ss_pred HHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccCcccCcC----HHHHH
Confidence 7766666543 333444457889999999999999999999 55553
No 272
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.8e-35 Score=318.67 Aligned_cols=250 Identities=48% Similarity=0.864 Sum_probs=217.3
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcH
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||.|+||.||++.+..+++.+|+|++.+...........+..|+.+++.++||||+++++.+..++.+|+||||+.+++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999888999999999877655555677888999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhh
Q 001869 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 836 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 836 (1002)
.+++... ..+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------- 147 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-----------
Confidence 9999765 358999999999999999999999999999999999999999999999999885432110
Q ss_pred hcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001869 837 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 916 (1002)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 916 (1002)
.......|+..|+|||.+.+...+.++|+||||+++|++++|..||...+.......+......
T Consensus 148 ----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (250)
T cd05123 148 ----------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR 211 (250)
T ss_pred ----------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC
Confidence 1123456888999999998888889999999999999999999999888776767777665544
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 917 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 917 ~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
++. ..+..+.++|++||..||++||++.. ++++++||||
T Consensus 212 ~~~--~~~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~~~~~f 250 (250)
T cd05123 212 FPE--FLSPEARDLISGLLQKDPTKRLGSGG-AEEIKAHPFF 250 (250)
T ss_pred CCC--CCCHHHHHHHHHHhcCCHhhCCCccc-HHHHHhCCCC
Confidence 443 35788999999999999999999433 3999999998
No 273
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=9.6e-36 Score=337.65 Aligned_cols=265 Identities=26% Similarity=0.425 Sum_probs=212.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE----eCCeE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHV 744 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~~ 744 (1002)
+.|++.+.||.|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 589999999999999999999999999999999876422 2334567778999999999999999999876 34578
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999999 56898888654 44999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
... .........|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 161 ~~~-----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 161 PTE-----------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred CcC-----------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 100 0011123578999999999865 4578899999999999999999999988765
Q ss_pred HHHHHHHHhC----------------------CCC----CC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 904 QKTFANILHK----------------------DLK----FP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~----------------------~~~----~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...+..+... ... .+ .....+.++.++|++||+.+|.+||+ +.++++
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~ 293 (334)
T cd07855 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERIT----VEQALQ 293 (334)
T ss_pred HHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcC----HHHHHh
Confidence 5444332221 000 00 01235788999999999999999999 999999
Q ss_pred CCCcCCCChh
Q 001869 955 HPFFKGVNWA 964 (1002)
Q Consensus 955 Hp~f~~~~~~ 964 (1002)
||||.+..-.
T Consensus 294 ~~~~~~~~~~ 303 (334)
T cd07855 294 HPFLAQYHDP 303 (334)
T ss_pred ChhhhhccCC
Confidence 9999975433
No 274
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.4e-35 Score=325.95 Aligned_cols=257 Identities=21% Similarity=0.323 Sum_probs=211.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
++..+|++++.||.|+||.||++.+..+ +..+|+|+++... .......+..|+.++..++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 4456899999999999999999987543 5789999987542 23345668889999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~ 806 (1002)
.+..++++||+.+++|.+++... ....++...+..++.|++.||.|||++||+||||||+||++++
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 99999999999999999998532 1234788889999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHH
Q 001869 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (1002)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGv 886 (1002)
++.+||+|||++....... .........+++.|+|||++.+..++.++|||||||
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05091 160 KLNVKISDLGLFREVYAAD-------------------------YYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214 (283)
T ss_pred CCceEecccccccccccch-------------------------heeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence 9999999999986432110 001112345678999999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 887 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 887 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++|+|++ |..||.+....+.+..+...... +....++..+.+|+.+||+.+|.+||+ +.+++.
T Consensus 215 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~RP~----~~~i~~ 278 (283)
T cd05091 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL-PCPDDCPAWVYTLMLECWNEFPSRRPR----FKDIHS 278 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHhCCCcccCCC----HHHHHH
Confidence 9999998 89999888887777776665432 223457888999999999999999999 666654
No 275
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.1e-35 Score=317.51 Aligned_cols=246 Identities=22% Similarity=0.327 Sum_probs=202.0
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++++...+.+|+||||+.++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36899999999999999999999999876432 3445567889999999999999999999999999999999999999
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||++.........
T Consensus 79 ~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~------- 150 (252)
T cd05084 79 DFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA------- 150 (252)
T ss_pred cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccccccc-------
Confidence 999998754 245899999999999999999999999999999999999999999999999998543210000
Q ss_pred hhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001869 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+..
T Consensus 151 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~- 211 (252)
T cd05084 151 ------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ- 211 (252)
T ss_pred ------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-
Confidence 00011123567999999998889999999999999999997 9999987766555444443
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
....+....++..+.+|+.+||+.+|++||| +.+++
T Consensus 212 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 247 (252)
T cd05084 212 GVRLPCPELCPDAVYRLMERCWEYDPGQRPS----FSTVH 247 (252)
T ss_pred CCCCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 2333344456889999999999999999999 56554
No 276
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.5e-35 Score=320.68 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=211.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.++|++.+.||+|+||.||+|.+..+ ...+|+|.++... .......+..|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 46799999999999999999998644 4589999887542 344456788899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999997643 36899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
... .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus 160 ~~~-------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~ 214 (266)
T cd05033 160 EAT-------------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN 214 (266)
T ss_pred ccc-------------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH
Confidence 000 00112235678999999998889999999999999999997 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......+... ...+....++..+.+|+.+||+.+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~ei~~ 260 (266)
T cd05033 215 QDVIKAVEDG-YRLPPPMDCPSALYQLMLDCWQKDRNERPT----FSQIVS 260 (266)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 7666655543 333444567889999999999999999999 666654
No 277
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.9e-35 Score=321.03 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=209.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++.++|+||+++++++. .+.+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI 75 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence 35667999999999999999999986 4567899999875432 2357888999999999999999999874 4678
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.+++|.+++.......++...+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999999997765567899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
. ........++..|+|||++.+..++.++||||||+++|+|++ |.+||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 156 E--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred C--------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 0 011122346778999999998889999999999999999998 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......+.. ....+.....+..+.+++.+||..+|++||+ ++++++
T Consensus 210 ~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~ 255 (260)
T cd05067 210 PEVIQNLER-GYRMPRPDNCPEELYELMRLCWKEKPEERPT----FEYLRS 255 (260)
T ss_pred HHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence 666655543 3334444557889999999999999999999 666543
No 278
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.4e-35 Score=327.61 Aligned_cols=262 Identities=21% Similarity=0.339 Sum_probs=214.0
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEE
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (1002)
+...+..++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++.+ +||||++++
T Consensus 5 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 82 (293)
T cd05053 5 PEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 82 (293)
T ss_pred cccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 34556778999999999999999999998644 3789999987542 233456688899999999 899999999
Q ss_pred EEEEeCCeEEEEEecCCCCcHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCC
Q 001869 736 ASFQTKTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~N 801 (1002)
+++...+.+|+||||+.+++|..++... ....++...+..++.||+.||+|||++||+||||||+|
T Consensus 83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N 162 (293)
T cd05053 83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN 162 (293)
T ss_pred EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence 9999999999999999999999998642 24568999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhH
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDI 881 (1002)
||++.++.+||+|||++........ ........++..|+|||++.+..++.++||
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 217 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDY-------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDV 217 (293)
T ss_pred EEEcCCCeEEeCccccccccccccc-------------------------eeccCCCCCCccccCHHHhccCCcCcccce
Confidence 9999999999999999865321100 001111235678999999988889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|||||++|+|++ |..||.+....+.+..+... ........++..+.+|+.+||..||++||| +.+++++
T Consensus 218 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~eil~~ 287 (293)
T cd05053 218 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-YRMEKPQNCTQELYHLMRDCWHEVPSQRPT----FKQLVED 287 (293)
T ss_pred eehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHHH
Confidence 999999999997 99999888776666555443 333344456889999999999999999999 6666543
No 279
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.9e-35 Score=323.38 Aligned_cols=257 Identities=20% Similarity=0.298 Sum_probs=210.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEcC-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..+.|++.+.||+|+||.||+|.+.. ++..|++|.+... ........+..|+.+++.++|+||+++++++.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 45689999999999999999999977 7889999987643 2233445688899999999999999999999998
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---cEEEE
Q 001869 742 THVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLT 813 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g---~vkL~ 813 (1002)
+..|+||||+.|++|.+++..... ..+++..+..++.||+.||+|||+++++|+||||+||+++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999999876421 2588999999999999999999999999999999999998765 59999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc
Q 001869 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt 893 (1002)
|||++........ ........+++.|+|||++.+..++.++|||||||++|+|++
T Consensus 162 dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 162 DFGMARDIYRASY-------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred cCccccccCCccc-------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHc
Confidence 9999865421100 000112234568999999998889999999999999999996
Q ss_pred -CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 894 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 894 -G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|..||.+.+.......+... ........++..+.+++.+||+.+|.+||+ +.++++|
T Consensus 217 ~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps----~~~vl~~ 274 (277)
T cd05036 217 LGYMPYPGRTNQEVMEFVTGG-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPN----FATILER 274 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 99999988777665554433 223333457889999999999999999999 7777765
No 280
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.8e-35 Score=319.43 Aligned_cols=247 Identities=22% Similarity=0.382 Sum_probs=206.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~ 743 (1002)
.+...+|++.+.||+|+||.||++.. .+..+|+|.+... .....+.+|+.+++.++|+|++++++++. ..+.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 46678999999999999999999987 4778999988643 23456888999999999999999999764 5677
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.|+||||+++++|.++++......+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 99999999999999999876555689999999999999999999999999999999999999999999999998853211
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
. .....++..|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 155 ~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 155 T------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred c------------------------------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0 112234568999999988889999999999999999997 999998877
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.......+... ........++..+.+++.+||+.+|.+||| +.+++
T Consensus 205 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~ 250 (256)
T cd05082 205 LKDVVPRVEKG-YKMDAPDGCPPVVYDVMKQCWHLDAATRPS----FLQLR 250 (256)
T ss_pred HHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHH
Confidence 66665555443 233333457889999999999999999999 55554
No 281
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.4e-35 Score=320.07 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=208.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||++.+.. +..+|+|.+..... ....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 4579999999999999999998754 44699998875422 235678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.+++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-- 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc--
Confidence 99999999999997643 358999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+....
T Consensus 155 ------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05113 155 ------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET 210 (256)
T ss_pred ------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence 001112345678999999988889999999999999999998 9999988777777
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
...+...... +.....+..+.+++.+||+.||.+||+ +.+|+.+
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~ll~~ 254 (256)
T cd05113 211 VEKVSQGLRL-YRPHLASEKVYAIMYSCWHEKAEERPT----FQQLLSS 254 (256)
T ss_pred HHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHh
Confidence 6766655333 223346789999999999999999999 7887754
No 282
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.7e-35 Score=325.67 Aligned_cols=257 Identities=25% Similarity=0.353 Sum_probs=210.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCC----------------eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSG----------------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 730 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~----------------~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn 730 (1002)
..++|++++.||+|+||.||+|.+...+ ..+|+|.+.... .......+.+|+.+++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCC
Confidence 4568999999999999999999876543 568999987643 2345677889999999999999
Q ss_pred cceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCC
Q 001869 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~N 801 (1002)
|+++++++..++.+++||||+.+++|..++.... ...+++..++.++.|++.||+|||++||+|+||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999997643 1258999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhH
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDI 881 (1002)
|+++.++.++|+|||++....... .........+++.|+|||++.+..++.++||
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSD-------------------------YYRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred eeecCCCceEEccccceeecccCc-------------------------ceeecCcCCCCceecCHHHhhcCCCCccchh
Confidence 999999999999999985432110 0111234457789999999988889999999
Q ss_pred HHHHHHHHHHHc--CCCCCCCCChHHHHHHHHhC------CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 882 WALGILLYEMLY--GYTPFRGKTRQKTFANILHK------DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 882 wSlGvil~ellt--G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
|||||++|+|++ |..||...+....+...... ....+....++.++.+|+.+||+.||.+||| +.+|+
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt----~~el~ 291 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPT----FREIH 291 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCC----HHHHH
Confidence 999999999997 78899877766666555432 1122333456789999999999999999999 77774
Q ss_pred c
Q 001869 954 K 954 (1002)
Q Consensus 954 ~ 954 (1002)
+
T Consensus 292 ~ 292 (296)
T cd05051 292 L 292 (296)
T ss_pred H
Confidence 3
No 283
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.5e-35 Score=318.92 Aligned_cols=250 Identities=23% Similarity=0.374 Sum_probs=207.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..+|++.+.||+|+||.||++.+. ++..+|+|.+.+... ....+.+|+.+++.++||||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 346899999999999999999885 467899999865422 234677899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||++|++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~- 155 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY- 155 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc-
Confidence 99999999999997643 3689999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 156 -------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05059 156 -------------------------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV 210 (256)
T ss_pred -------------------------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence 00111224567999999998889999999999999999998 8999988777766
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...+... ...+....++..+.+++.+||+.+|.+||| +.++++
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~~~l~ 253 (256)
T cd05059 211 VESVSAG-YRLYRPKLAPTEVYTIMYSCWHEKPEDRPA----FKKLLS 253 (256)
T ss_pred HHHHHcC-CcCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 6555433 333444457889999999999999999999 667664
No 284
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.6e-35 Score=325.57 Aligned_cols=254 Identities=30% Similarity=0.476 Sum_probs=213.7
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|.....||+|+||.||++.+..++..+|+|.+... .......+.+|+.+++.++|+||+++++++...+..|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 44457799999999999999999999999987533 233456688899999999999999999999999999999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+++++|.+++.. ..+++..++.++.|++.||+|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~------ 169 (292)
T cd06657 99 LEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 169 (292)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc------
Confidence 999999998754 34899999999999999999999999999999999999999999999999987543211
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i 910 (1002)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+.........+
T Consensus 170 ---------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~ 228 (292)
T cd06657 170 ---------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228 (292)
T ss_pred ---------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 01112356889999999998888899999999999999999999999887766555444
Q ss_pred HhCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 911 LHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 911 ~~~~-~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.... ..+.....++..+.+++.+||..||.+||+ +.++++||||...
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~----~~~ll~~~~~~~~ 276 (292)
T cd06657 229 RDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 276 (292)
T ss_pred HhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcC----HHHHhcChHHhcc
Confidence 3321 222233456888999999999999999999 9999999999974
No 285
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.6e-35 Score=327.47 Aligned_cols=256 Identities=25% Similarity=0.366 Sum_probs=216.5
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|...+.||.|+||.||++.+..++..+|+|.+.............+.+|+.+++.++|+|++++++++...+..|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 46888999999999999999999999999999987543334445567888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+. ++|.+++... ...+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus 95 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~----- 167 (308)
T cd06634 95 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 167 (308)
T ss_pred EccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC-----
Confidence 9995 6888777543 34589999999999999999999999999999999999999999999999998854221
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....|++.|+|||.+. ...++.++|||||||++|+|++|..||...+...
T Consensus 168 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 221 (308)
T cd06634 168 --------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (308)
T ss_pred --------------------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH
Confidence 12346888999999975 3456789999999999999999999998877666
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
....+.....+.......+..+.+||.+||+.+|.+||+ +.++++|||+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~ll~~~~~~~~ 273 (308)
T cd06634 222 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCC----HHHHhhCcccccc
Confidence 555555554443334457888999999999999999999 9999999999973
No 286
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.6e-35 Score=329.73 Aligned_cols=256 Identities=24% Similarity=0.347 Sum_probs=202.1
Q ss_pred CcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcHHHHH
Q 001869 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 760 (1002)
Q Consensus 681 ~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 760 (1002)
++|.||++.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44556666666799999999997652 24456678999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 001869 761 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (1002)
Q Consensus 761 ~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (1002)
.......+++..+..++.||+.||+|||++||+||||||+||+++.+|.+||+|||.+..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------------ 158 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------------ 158 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc------------
Confidence 86545568999999999999999999999999999999999999999999999999886432111000
Q ss_pred CCCCCccccccCcccccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC--
Q 001869 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK-- 916 (1002)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-- 916 (1002)
...........++..|+|||++.. ..++.++|||||||++|+|++|..||........+.....+...
T Consensus 159 --------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (314)
T cd08216 159 --------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCL 230 (314)
T ss_pred --------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccc
Confidence 000111234567889999999876 35778999999999999999999999876554433222221110
Q ss_pred ------------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 917 ------------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 917 ------------------------------~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+.....+.++.+|+.+||+.||++||| ++++|+||||+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~p~~~~~ 301 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS----ASQLLNHSFFKQC 301 (314)
T ss_pred cccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC----HHHHhcCchHhhh
Confidence 0001122457889999999999999999 9999999999975
No 287
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.3e-35 Score=337.94 Aligned_cols=260 Identities=22% Similarity=0.297 Sum_probs=211.8
Q ss_pred cccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~ 737 (1002)
+.+..++|.+.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.+|.++. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 4566678999999999999999999964 345789999997542 2333456889999999997 9999999999
Q ss_pred EEeCCeEEEEEecCCCCcHHHHHhhCCC----------------------------------------------------
Q 001869 738 FQTKTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 765 (1002)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------------------------------------- 765 (1002)
+...+.+|+|||||.+|+|.+++.....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999965321
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCC
Q 001869 766 --------------------------------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 766 --------------------------------------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~N 801 (1002)
..++...+..++.||+.||+|||+++|+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 236777888999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhH
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDI 881 (1002)
||++.++.+||+|||++........ ........+++.|+|||.+.+..++.++||
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSN-------------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccc-------------------------cccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 9999999999999999864321100 011123457889999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|||||++|+|++ |..||......+.....+......+....++.++.+|+.+||..+|.+||+ +.+|++
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs----~~ell~ 394 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPD----FSQLVH 394 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence 999999999997 899998766666555555555444444557889999999999999999999 555554
No 288
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=9.4e-35 Score=315.15 Aligned_cols=257 Identities=30% Similarity=0.437 Sum_probs=215.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lV 747 (1002)
+|++.+.||+|++|.||+|.+..+++.+++|++..... .......+.+|+.++++++||||+++++.+... +.+++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 47888999999999999999998999999999876532 245567888999999999999999999999988 899999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.+++|.+++.... .+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999998753 6899999999999999999999999999999999999999999999999998654321100
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC-hHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~-~~~~ 906 (1002)
.......++..|+|||.+.+...+.++||||||+++|+|++|..||.... ....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 212 (260)
T cd06606 158 -------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA 212 (260)
T ss_pred -------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 01223568899999999988888999999999999999999999998765 2333
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
...+.............+..+.+||.+||..||.+||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 260 (260)
T cd06606 213 LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT----ADELLQHPFL 260 (260)
T ss_pred HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCC----HHHHhhCCCC
Confidence 33333212222223345789999999999999999999 9999999997
No 289
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.7e-35 Score=322.13 Aligned_cols=254 Identities=20% Similarity=0.303 Sum_probs=209.7
Q ss_pred ccCCcccccccccCCcEEEEEEEE-----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+..+|++.+.||+|+||.||++.. ..++..+++|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 456789999999999999999974 235678999987643 344556788999999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC
Q 001869 742 THVCLITDYCPGGELFLLLDRQPT-------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~-------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g 808 (1002)
+..|+||||+++++|.+++..... ..++...+..++.||+.||+|||++||+||||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 999999999999999999875421 3488999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHH
Q 001869 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
.+||+|||++........ ........+++.|+|||++.+..++.++|||||||++
T Consensus 160 ~~kL~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDY-------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL 214 (280)
T ss_pred CEEECCCCceeEcCCCce-------------------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHHH
Confidence 999999999854321100 0111233467889999999999999999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 889 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
|+|++ |.+||........+..+.... .......++..+.+||.+||+.||.+||+ +.+++
T Consensus 215 ~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~l~ 275 (280)
T cd05092 215 WEIFTYGKQPWYQLSNTEAIECITQGR-ELERPRTCPPEVYAIMQGCWQREPQQRMV----IKDIH 275 (280)
T ss_pred HHHHcCCCCCCccCCHHHHHHHHHcCc-cCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence 99998 999998877777666665543 23333457889999999999999999999 55554
No 290
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.6e-35 Score=315.98 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=211.2
Q ss_pred cccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecC
Q 001869 675 KPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
+.||+|+||.||+|.+... +..|++|.+..... ......+..|+.+++.++|+||+++++++.....+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999866 88999999886532 224678889999999999999999999999999999999999
Q ss_pred CCCcHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 752 PGGELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 752 ~ggsL~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
++++|.+++.... ...+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999997641 256999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.. ........+++.|+|||.+....++.++|||||||++|+|++ |..||.....
T Consensus 159 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 213 (262)
T cd00192 159 DY-------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN 213 (262)
T ss_pred cc-------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence 10 011233467889999999988888999999999999999998 6999998877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
......+... ...+....++.++.+++.+||+.||.+||| +.++++|
T Consensus 214 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~~ 260 (262)
T cd00192 214 EEVLEYLRKG-YRLPKPEYCPDELYELMLSCWQLDPEDRPT----FSELVER 260 (262)
T ss_pred HHHHHHHHcC-CCCCCCccCChHHHHHHHHHccCCcccCcC----HHHHHHh
Confidence 7776666653 333344456889999999999999999999 8888765
No 291
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.3e-35 Score=319.30 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=205.6
Q ss_pred cccccccccCCcEEEEEEEEcC---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe----
Q 001869 671 FRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 743 (1002)
|++.+.||+|+||.||+|.... ++..||+|.++... ........+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 6788999999999999998754 34789999987542 234455678899999999999999999998865443
Q ss_pred --EEEEEecCCCCcHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 744 --VCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 744 --~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
.++||||+++++|..++... ....+++..+..++.|++.||.|||++||+||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999988542 223689999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~ 896 (1002)
+........ ........++..|+|||.+.+..++.++|||||||++|+|++ |..
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~ 214 (273)
T cd05035 160 SKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214 (273)
T ss_pred eeecccccc-------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 865421110 001112235678999999988889999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
||.+....+.+..+.... .......++..+.+++.+||+.||.+||+ +.++++
T Consensus 215 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~e~~~ 267 (273)
T cd05035 215 PYPGVENHEIYDYLRHGN-RLKQPEDCLDELYDLMYSCWRADPKDRPT----FTKLRE 267 (273)
T ss_pred CCCCCCHHHHHHHHHcCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 998887777666655443 33334457889999999999999999999 666554
No 292
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7.9e-35 Score=321.95 Aligned_cols=254 Identities=24% Similarity=0.437 Sum_probs=208.8
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCcceEEEEEEeCCe----
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTH---- 743 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~---- 743 (1002)
|++.+.||.|+||.||++.+..+++.||+|.++.... .......+.+|+.+++.+ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788999999999999999988899999999975432 222334566787777666 59999999999988776
Q ss_pred -EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 744 -VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 -~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
++++|||+. ++|.+++.......+++..++.++.||+.||.|||+++++|+||+|+||+++.++.+||+|||++....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999995 589998877544568999999999999999999999999999999999999999999999999985532
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
... ......+++.|+|||++.+..++.++|||||||++|+|++|.+||.+.+
T Consensus 159 ~~~----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 159 FEM----------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred CCc----------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 110 0112357889999999999889999999999999999999999999888
Q ss_pred hHHHHHHHHhCC-----CCCC-----------C---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 903 RQKTFANILHKD-----LKFP-----------S---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 903 ~~~~~~~i~~~~-----~~~~-----------~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
..+.+.++...- ..++ . ....+..+.+||.+||+.||.+||+ +.++++|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~il~~~~ 286 (287)
T cd07838 211 EADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS----AFEALQHPY 286 (287)
T ss_pred hHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCC----HHHHhcCcC
Confidence 777766665421 0000 0 0123567789999999999999999 999999999
Q ss_pred c
Q 001869 958 F 958 (1002)
Q Consensus 958 f 958 (1002)
|
T Consensus 287 ~ 287 (287)
T cd07838 287 F 287 (287)
T ss_pred C
Confidence 8
No 293
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.6e-34 Score=313.13 Aligned_cols=254 Identities=27% Similarity=0.462 Sum_probs=218.0
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||+|++|.||++.+..+++.|++|.+..... .......+.+|++++++++|||++++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 48889999999999999999999999999999986533 23456788899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+.+++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 154 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--- 154 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc---
Confidence 99999999999765 5689999999999999999999999999999999999999999999999999865431110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
......|+..|+|||.+.+..++.++||||||+++|+|++|..||...........
T Consensus 155 ------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (254)
T cd06627 155 ------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR 210 (254)
T ss_pred ------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 01234688899999999888888899999999999999999999987766555555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+...... +.....+..+.+++.+||..+|++||+ +.+++.||||
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~~ 254 (254)
T cd06627 211 IVQDDHP-PLPEGISPELKDFLMQCFQKDPNLRPT----AKQLLKHPWI 254 (254)
T ss_pred HhccCCC-CCCCCCCHHHHHHHHHHHhCChhhCcC----HHHHhcCCCC
Confidence 5433222 223346788999999999999999999 9999999998
No 294
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=6e-35 Score=332.22 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=207.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-------
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------- 741 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------- 741 (1002)
.+|++.+.||.|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 68999999999999999999999999999999986542 24456778899999999999999999876543
Q ss_pred -------CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEE
Q 001869 742 -------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLT 813 (1002)
Q Consensus 742 -------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~ 813 (1002)
...|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEEC
Confidence 36899999995 689888764 34899999999999999999999999999999999999984 5678999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHH
Q 001869 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~ell 892 (1002)
|||++........ .........|+..|+|||.+.. ..++.++|||||||++|+|+
T Consensus 158 dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~ 213 (342)
T cd07854 158 DFGLARIVDPHYS------------------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 213 (342)
T ss_pred CcccceecCCccc------------------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHH
Confidence 9999854321100 0001122357889999998754 55778999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhCCC----------------------CCC------CCCCCCHHHHHHHHHccccCcCCCCC
Q 001869 893 YGYTPFRGKTRQKTFANILHKDL----------------------KFP------SSTPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 893 tG~~Pf~~~~~~~~~~~i~~~~~----------------------~~~------~~~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
+|+.||.+.+.......++.... ..+ .....+.++.+||.+||+.||.+|||
T Consensus 214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 293 (342)
T cd07854 214 TGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLT 293 (342)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccC
Confidence 99999988776665554433210 000 01235778899999999999999999
Q ss_pred ChhcHHHHHcCCCcCCC
Q 001869 945 SHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 945 ~~~~a~elL~Hp~f~~~ 961 (1002)
+.++++||||+..
T Consensus 294 ----~~ell~h~~~~~~ 306 (342)
T cd07854 294 ----AEEALMHPYMSCY 306 (342)
T ss_pred ----HHHHhCCCccccc
Confidence 9999999999864
No 295
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9.7e-35 Score=316.88 Aligned_cols=253 Identities=24% Similarity=0.365 Sum_probs=212.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|.+.+.||.|+||.||++.+. .++.+|||.+..... ....+.+|+.+++.++|+||+++++++......
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence 356789999999999999999999975 457899999875422 345688899999999999999999999998999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
++||||+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999999998765567999999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
. ........++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+.+.
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 157 E--------------------------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred h--------------------------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 0 000112234668999999998889999999999999999998 9999988887
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+..+... ...+.....+..+.+++.+||+.+|.+||+ +++++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~l~ 255 (261)
T cd05034 211 REVLEQVERG-YRMPRPPNCPEELYDLMLQCWDKDPEERPT----FEYLQ 255 (261)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHH
Confidence 7777666543 333444456788999999999999999999 55554
No 296
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=9.4e-35 Score=317.16 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=206.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++...||+|+||.||++.+..+ ..+|+|.+.... .....+.+|+.+++.++|||++++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 4456899999999999999999998655 468999876542 22356788999999999999999998875 45689
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++.......++...+..++.||+.||.|||+.||+|+||||+||++++++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred --------------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 001112346778999999988889999999999999999999 99999988777
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.....+... ...+.....+..+.+|+.+||..||.+||+ +++++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~ 254 (260)
T cd05069 211 EVLEQVERG-YRMPCPQGCPESLHELMKLCWKKDPDERPT----FEYIQ 254 (260)
T ss_pred HHHHHHHcC-CCCCCCcccCHHHHHHHHHHccCCcccCcC----HHHHH
Confidence 766665543 333334456788999999999999999999 55554
No 297
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-34 Score=312.15 Aligned_cols=252 Identities=31% Similarity=0.513 Sum_probs=214.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|.+.+.||.|++|.||++.+..++..+++|++..... .....+.+|+.+++.++|+||+++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 47888999999999999999988999999999876532 355678899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+++++|.+++.... ..++...+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK---- 152 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc----
Confidence 999999999987642 468999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......
T Consensus 153 ------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 208 (253)
T cd05122 153 ------------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK 208 (253)
T ss_pred ------------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence 02245688999999999888888999999999999999999999987755544444
Q ss_pred HHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 910 ILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 910 i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
+..... ..+....++..+.++|.+||+.||.+||| +.++++|||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~~~l~~~~ 253 (253)
T cd05122 209 IATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT----AEQLLKHPF 253 (253)
T ss_pred HHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCC----HHHHhcCCC
Confidence 433222 22233334788999999999999999999 999999998
No 298
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.8e-35 Score=318.71 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=207.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCC---eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
..+|++.+.||+|+||.||+|.+..++ ..+|+|.++... .......+.+|+.+++.++||||+++++++..++.+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 467999999999999999999986443 479999887542 233456788899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++.... ..++...+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999999997653 45899999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
... ........++..|+|||.+.+..++.++|+|||||++|++++ |..||.+...
T Consensus 160 ~~~------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~ 215 (267)
T cd05066 160 PEA------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN 215 (267)
T ss_pred cce------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH
Confidence 100 000111234568999999998889999999999999999886 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.+....+... ...+....++..+.+++.+||+.+|.+||++.+
T Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 258 (267)
T cd05066 216 QDVIKAIEEG-YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQ 258 (267)
T ss_pred HHHHHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHH
Confidence 6666655543 344555567889999999999999999999443
No 299
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.9e-35 Score=333.35 Aligned_cols=254 Identities=27% Similarity=0.424 Sum_probs=208.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|.+++.||+|+||.||++.+..+++.||+|++.+.. ........+.+|+.++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 478999999999999999999999999999999987642 2233345677899999999999999999988643
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...|++++++ +++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence 4578999988 8899888764 34899999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. ......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||..
T Consensus 171 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 171 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cc------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 10 1123468899999999866 5678899999999999999999999987
Q ss_pred CChHHHHHHHHhCCC-----------------------CCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 901 KTRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~-----------------------~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+..... ..+. ....+.++.+||.+||+.||.+||+ +.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e 296 (345)
T cd07877 221 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQ 296 (345)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCC----HHH
Confidence 666554444332110 0000 1135778999999999999999999 999
Q ss_pred HHcCCCcCC
Q 001869 952 IKKHPFFKG 960 (1002)
Q Consensus 952 lL~Hp~f~~ 960 (1002)
+++||||+.
T Consensus 297 ~l~h~~f~~ 305 (345)
T cd07877 297 ALAHAYFAQ 305 (345)
T ss_pred HhcChhhhh
Confidence 999999996
No 300
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.3e-34 Score=315.54 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=200.8
Q ss_pred ccccCCcEEEEEEEE--cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 676 PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
.||+|+||.||+|.+ ..++..+|+|+++... ........+..|+.+++.++||||+++++++.. +..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 589999999999965 4668899999987542 334456778899999999999999999998754 567999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------ 151 (257)
T cd05116 80 GPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------ 151 (257)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe------
Confidence 9999999764 45899999999999999999999999999999999999999999999999998654321100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~ 912 (1002)
........+++.|+|||.+....++.++|||||||++|+|++ |..||...........+..
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~ 213 (257)
T cd05116 152 ------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213 (257)
T ss_pred ------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC
Confidence 000112235678999999988888999999999999999997 9999988777666665554
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
+. ..+....++.++.+||.+||+.||.+||++......
T Consensus 214 ~~-~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 214 GE-RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 33 233344578999999999999999999995444333
No 301
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.2e-34 Score=327.72 Aligned_cols=254 Identities=27% Similarity=0.448 Sum_probs=207.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~l 746 (1002)
.++|++++.||.|+||.||+|.+..+++.||+|.+.+... .......+..|+.+++.++||||++++++|.. ...+|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 4689999999999999999999999999999998875422 23345667789999999999999999999865 568899
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+ +++|..+++. ..++...+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||.+.....
T Consensus 88 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~--- 160 (328)
T cd07856 88 VTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP--- 160 (328)
T ss_pred Eeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---
Confidence 99999 6789888864 3478899999999999999999999999999999999999999999999998853210
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus 161 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~ 213 (328)
T cd07856 161 ---------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN 213 (328)
T ss_pred ---------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0123457889999999765 568889999999999999999999998766533
Q ss_pred HHHHHHhC--------------------------CCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 906 TFANILHK--------------------------DLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 906 ~~~~i~~~--------------------------~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
....+... ....+ ....++..+.++|++||+.+|++||+ +.+++.||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~ell~~~ 289 (328)
T cd07856 214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRIS----AAEALAHP 289 (328)
T ss_pred HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCC
Confidence 32221110 00111 01235778999999999999999999 99999999
Q ss_pred CcCC
Q 001869 957 FFKG 960 (1002)
Q Consensus 957 ~f~~ 960 (1002)
||..
T Consensus 290 ~~~~ 293 (328)
T cd07856 290 YLAP 293 (328)
T ss_pred cccc
Confidence 9975
No 302
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.4e-35 Score=334.35 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=212.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 743 (1002)
.++|++.+.||.|+||.||+|.+..++..||+|++.... ........+.+|+.+++.++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 468999999999999999999999999999999987542 233345667789999999999999999998876554
Q ss_pred --EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 744 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 744 --~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+|+|+||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 7899999865 35899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 169 DDE------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred ccc------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 210 123457889999999865 3677899999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 901 KTRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~-----------------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..++......+ .....+..+.+||.+||+.||.+||| +.+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt----~~e 294 (343)
T cd07851 219 SDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT----AAE 294 (343)
T ss_pred CChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC----HHH
Confidence 877666665543211000 01235788999999999999999999 999
Q ss_pred HHcCCCcCCC
Q 001869 952 IKKHPFFKGV 961 (1002)
Q Consensus 952 lL~Hp~f~~~ 961 (1002)
|++||||...
T Consensus 295 ll~h~~~~~~ 304 (343)
T cd07851 295 ALAHPYLAEY 304 (343)
T ss_pred HhcCCCcccc
Confidence 9999999963
No 303
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.7e-36 Score=347.71 Aligned_cols=255 Identities=24% Similarity=0.360 Sum_probs=221.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
+...+.+..+.||+|+||.||+++.. .....||||.++... +.....+|.+|++++..|+|||||++++++..
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 45667888899999999999999863 335689999998653 44467899999999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhC--------CCC----CCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQ--------PTK----VLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~--------~~~----~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g 808 (1002)
++.+|+|+|||..|+|..+|... .+. .|+..+...|+.||+.||.||-++.+|||||...|+||.++-
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL 640 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence 99999999999999999999842 122 388999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHH
Q 001869 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
.|||+|||+++.....+ +. +..+.-.-...|||||.+....++.+||||||||+|
T Consensus 641 ~VKIsDfGLsRdiYssD---------YY----------------k~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvL 695 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSD---------YY----------------KVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVL 695 (774)
T ss_pred EEEecccccchhhhhhh---------hh----------------cccCCceeeeecCCHHHhhcCcccchhhhhhhhhhh
Confidence 99999999996532111 10 111122346789999999999999999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 889 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
||+++ |.-||.+....+.+..+..+.. ++.+..++.++.+||..||+.+|.+||+|.+.
T Consensus 696 WEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 696 WEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred hhhhccccCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 99996 9999999999999999999887 88888899999999999999999999996653
No 304
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=6e-35 Score=332.34 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=205.3
Q ss_pred cccCCcccccccccCCcEEEEEEEE-----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 739 (1002)
+..++|++.+.||.|+||.||+|.+ ..+++.||||.++... .......+.+|+.++..+ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 4457899999999999999999985 3457899999987542 233456788899999999 6899999999876
Q ss_pred e-CCeEEEEEecCCCCcHHHHHhhCC------------------------------------------------------
Q 001869 740 T-KTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 764 (1002)
Q Consensus 740 ~-~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 764 (1002)
. +..+++|||||++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 457899999999999999986431
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 765 -----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 765 -----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~------- 234 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------- 234 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-------
Confidence 12367788899999999999999999999999999999999999999999999854321100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~ 912 (1002)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+.
T Consensus 235 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 296 (343)
T cd05103 235 ------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 296 (343)
T ss_pred ------------------hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh
Confidence 001112345678999999988889999999999999999996 9999987554433444443
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.....+.....++.+.+++..||+.||.+||| +.+|++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps----~~eil~~ 335 (343)
T cd05103 297 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 335 (343)
T ss_pred ccCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 33333333346788999999999999999999 7777765
No 305
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8.9e-35 Score=323.02 Aligned_cols=255 Identities=21% Similarity=0.295 Sum_probs=209.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
...+|.+.+.||+|+||.||+|.+. .++..+++|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 3457999999999999999999864 34567899987643 233446688899999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC
Q 001869 742 THVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~ 807 (1002)
+..++||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 99999999999999999997532 2348899999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHH
Q 001869 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvi 887 (1002)
+.++|+|||++........ ........|++.|+|||++.+..++.++|||||||+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 214 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 214 (291)
T ss_pred CcEEECCCCcccccCCCce-------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHH
Confidence 9999999999864321100 011123457889999999999889999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 888 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 888 l~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
+|+|++ |..||...+....+..+....... .....+..+.+|+.+||+.||.+||++.++++
T Consensus 215 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 215 LWEIFTYGKQPWFQLSNTEVIECITQGRVLE-RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHhCCCCCC-CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 999998 999998888777666665544332 23346788999999999999999999554433
No 306
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.4e-35 Score=333.37 Aligned_cols=257 Identities=30% Similarity=0.467 Sum_probs=209.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------C
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------T 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~ 742 (1002)
++|.+.+.||+|+||.||+|.+..++..||+|.+.+... .......+.+|+.+++.++||||+++++++... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 589999999999999999999999999999999876422 223345677899999999999999999998754 3
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
..|+||||+. .+|..++. ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 4699999994 57776652 348999999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
. ......|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 169 ~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 169 A------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred C------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1123467889999999876 45788999999999999999999999987
Q ss_pred ChHHHHHHHHhCC-----------------------CCCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 902 TRQKTFANILHKD-----------------------LKFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~~~~~~~~i~~~~-----------------------~~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+....+..+.... ...+. .+..+..+.+||.+||+.||.+||+ +.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~----~~e~ 294 (342)
T cd07879 219 DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT----ATEA 294 (342)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC----HHHH
Confidence 7655554443310 00000 1235678899999999999999999 9999
Q ss_pred HcCCCcCCCChhh
Q 001869 953 KKHPFFKGVNWAL 965 (1002)
Q Consensus 953 L~Hp~f~~~~~~~ 965 (1002)
+.||||+.+....
T Consensus 295 l~h~~f~~~~~~~ 307 (342)
T cd07879 295 LEHPYFDSFRDAD 307 (342)
T ss_pred hcCcchhhccccc
Confidence 9999999976543
No 307
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.9e-35 Score=325.66 Aligned_cols=257 Identities=21% Similarity=0.309 Sum_probs=206.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcC-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (1002)
.+..++|.+.+.||+|+||.||++.+.. +...+|+|.+.... .......+..|+.+++.+ +||||+++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLG 91 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 4455789999999999999999998743 23579999987542 233456788899999999 7999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
++...+..|+||||+.+++|.+++.... ...++...+..++.||+.||+|||++|++||||||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 171 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 171 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence 9999999999999999999999997642 13488899999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 226 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 226 (307)
T ss_pred EEcCCCcEEECCCcccccccccch-------------------------hhccccCCCccceeChHHhccCCCCcHHHHH
Confidence 999999999999999854321000 0001112345789999999988899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001869 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
||||++|+|++ |..||.+....+....+.. ....+....++.++.+|+.+||..+|.+||++.+++
T Consensus 227 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl 293 (307)
T cd05098 227 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 293 (307)
T ss_pred HHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence 99999999998 8999987766555554433 333333445788999999999999999999944433
No 308
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-34 Score=315.14 Aligned_cols=254 Identities=28% Similarity=0.453 Sum_probs=217.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
+|++.+.||.|+||.||++.+..++..+++|.+..... .......+.+|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 48899999999999999999999999999999876533 23445677889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 750 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|+++++|..++... ....+++..+..++.|++.||+|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 99999999998652 2345899999999999999999999999999999999999999999999999998553211
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.....
T Consensus 157 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~ 210 (256)
T cd08530 157 --------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR 210 (256)
T ss_pred --------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111235788999999999988999999999999999999999999988876666
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+....... .....+.++++++.+||+.+|.+||+ +.++++||++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~p~~ 256 (256)
T cd08530 211 YKVQRGKYPP-IPPIYSQDLQNFIRSMLQVKPKLRPN----CDKILASPAV 256 (256)
T ss_pred HHHhcCCCCC-CchhhCHHHHHHHHHHcCCCcccCCC----HHHHhcCCCC
Confidence 6555544322 22356788999999999999999999 9999999984
No 309
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.4e-34 Score=317.68 Aligned_cols=253 Identities=23% Similarity=0.295 Sum_probs=204.0
Q ss_pred cccccccccCCcEEEEEEEEcCCCe--EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe------CC
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------KT 742 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~ 742 (1002)
|.+.+.||+|+||.||+|.+..++. .+|+|.++... ........+..|+.+++.++||||+++++++.. ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999999877765 68999887542 244556778889999999999999999997642 23
Q ss_pred eEEEEEecCCCCcHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 743 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
..++||||+.+++|.+++... ....++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887432 2235889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~P 897 (1002)
........ ........+++.|++||++.+..++.++|||||||++|+|++ |..|
T Consensus 160 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p 214 (272)
T cd05075 160 KKIYNGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214 (272)
T ss_pred cccCcccc-------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence 65421100 001122346778999999999999999999999999999998 8999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|.+......+..+..+.. .+....++..+.++|.+||+.||.+||| +.+|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~ 266 (272)
T cd05075 215 YPGVENSEIYDYLRQGNR-LKQPPDCLDGLYSLMSSCWLLNPKDRPS----FETLRC 266 (272)
T ss_pred CCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 988777776666655432 2333457788999999999999999999 666654
No 310
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.3e-34 Score=319.50 Aligned_cols=254 Identities=21% Similarity=0.326 Sum_probs=207.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+..++|++++.||.|+||.||+|.+..++. .||+|++.... .......+.+|+.++..++||||+.+++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 445789999999999999999999877765 48999886542 34445678889999999999999999998875
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...+++|||+++|+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 4578999999999999998754 245899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 160 DIDETE-------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred ccccce-------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 321100 00111235678999999998889999999999999999998 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
........ .+......+....++..+.+++.+||..||++||+ +.+++
T Consensus 215 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~l~ 262 (279)
T cd05109 215 IPAREIPD-LLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPR----FRELV 262 (279)
T ss_pred CCHHHHHH-HHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 66655444 34433344445567889999999999999999999 56665
No 311
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.8e-34 Score=314.00 Aligned_cols=247 Identities=22% Similarity=0.343 Sum_probs=208.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||.|+||.||+|.. .++.+|+|.+..... ....+.+|+.+++.++|+||+++++++.+.+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 4567899999999999999999987 478999999875421 4567889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+++++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||.+......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~- 155 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG- 155 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc-
Confidence 9999999999999998765457999999999999999999999999999999999999999999999999998543110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
.....++..|+|||++....++.++|||||||++|++++ |..||......
T Consensus 156 -----------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 206 (256)
T cd05039 156 -----------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred -----------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 001234567999999988888999999999999999997 99999887766
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.....+... ........++..+.++|.+||..+|.+||+ +.+++
T Consensus 207 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~ 250 (256)
T cd05039 207 DVVPHVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKRPT----FKQLR 250 (256)
T ss_pred HHHHHHhcC-CCCCCccCCCHHHHHHHHHHhccChhhCcC----HHHHH
Confidence 655544433 233333456889999999999999999999 55554
No 312
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-34 Score=322.23 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=205.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCe--EEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
++|++.+.||.|+||.||+|.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 579999999999999999999877664 4688877632 2334456788899999999 7999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEE
Q 001869 746 LITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
+||||+++++|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997532 13488899999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||++...... ........+..|+|||++.+..++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 160 IADFGLSRGEEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred ECCcCCCccccce----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence 9999987421100 000111234579999999888899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 892 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++ |..||.+.........+... ...+....++..+.+|+.+||+.+|.+||+ ++++++
T Consensus 212 ~t~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 270 (297)
T cd05089 212 VSLGGTPYCGMTCAELYEKLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYERPP----FAQISV 270 (297)
T ss_pred HcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 97 99999988877777666543 233333457889999999999999999999 555543
No 313
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-34 Score=322.87 Aligned_cols=256 Identities=24% Similarity=0.345 Sum_probs=204.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCC--------------CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcc
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGS--------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVP 732 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~--------------~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv 732 (1002)
..++|++.+.||+|+||.||+|.+..+ ...||+|.++... .......+.+|++++++++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcC
Confidence 346899999999999999999987543 3358999987542 334456788999999999999999
Q ss_pred eEEEEEEeCCeEEEEEecCCCCcHHHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 733 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 733 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
++++++...+..|+||||+.+++|.+++.... ...++...+..++.||+.||+|||++|++|+||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999986432 12367888999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
+++.++.+||+|||++....... .........+++.|+|||++.+..++.++|||
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 215 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASDVW 215 (295)
T ss_pred EEcCCCcEEecccccccccccCc-------------------------ceeccCcCcCceeecChhhhccCCcCchhhHH
Confidence 99999999999999985432110 00111234567889999999888899999999
Q ss_pred HHHHHHHHHHc--CCCCCCCCChHHHHHHHHh------CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 883 ALGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 883 SlGvil~ellt--G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
||||++|+|++ |..||...+.......+.. ..........++..+.+|+.+||+.||.+||+ +.+++
T Consensus 216 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs----~~~i~ 290 (295)
T cd05097 216 AFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPT----FNKIH 290 (295)
T ss_pred HHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHH
Confidence 99999999987 7789987766665554432 11112223446788999999999999999999 55553
No 314
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.9e-34 Score=313.79 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=207.5
Q ss_pred cccccCCcEEEEEEEEcC-CC--eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecC
Q 001869 675 KPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~-~~--~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
+.||+|++|.||++.+.. .+ ..+|||.+...... .....+.+|+.++++++||||+++++++.. ..+++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999855 33 36999998875432 566788899999999999999999999988 8999999999
Q ss_pred CCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCc
Q 001869 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (1002)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (1002)
++++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---- 153 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---- 153 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc----
Confidence 9999999998754356899999999999999999999999999999999999999999999999998654321100
Q ss_pred chhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001869 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i 910 (1002)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus 154 --------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 213 (257)
T cd05040 154 --------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213 (257)
T ss_pred --------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 001113457788999999998889999999999999999998 99999888877777777
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......++.....+..+.+++.+||+.+|.+||+ +.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~~ 253 (257)
T cd05040 214 DKEGERLERPEACPQDIYNVMLQCWAHNPADRPT----FAALRE 253 (257)
T ss_pred HhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCC----HHHHHH
Confidence 6544444444456789999999999999999999 565543
No 315
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.6e-34 Score=327.83 Aligned_cols=273 Identities=25% Similarity=0.338 Sum_probs=213.1
Q ss_pred CCccc-ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChh-----------HHHHHHHHHHHHHhCCCCCcceEEE
Q 001869 669 QHFRP-IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------KVHRACAEREILDMLDHPFVPALYA 736 (1002)
Q Consensus 669 ~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~hpnIv~l~~ 736 (1002)
++|.. .+.||.|+||.||+|.+..+++.||||++......... ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 46654 57799999999999999999999999998754322210 1124678999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEecc
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
++...+..|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 9999999999999995 6899998764 458999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCC
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~ 895 (1002)
++............... . ............+++.|+|||.+.+. .++.++|||||||++|+|++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKD---------E----TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ceeeccccccccccccc---------c----cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 98665422111000000 0 00001112234578899999998764 4688999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCC--C---CCCC---------------------CCCCCHHHHHHHHHccccCcCCCCCChhcH
Q 001869 896 TPFRGKTRQKTFANILHKD--L---KFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGA 949 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~--~---~~~~---------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a 949 (1002)
+||.+.+....+..+.... . .++. ....+..+.+||.+||+.+|.+||+ +
T Consensus 232 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~ 307 (335)
T PTZ00024 232 PLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS----A 307 (335)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC----H
Confidence 9999888776665554311 0 0100 1234678899999999999999999 9
Q ss_pred HHHHcCCCcCCC
Q 001869 950 NEIKKHPFFKGV 961 (1002)
Q Consensus 950 ~elL~Hp~f~~~ 961 (1002)
+++|.||||++.
T Consensus 308 ~~~l~~~~~~~~ 319 (335)
T PTZ00024 308 KEALKHEYFKSD 319 (335)
T ss_pred HHHhcCcccCCC
Confidence 999999999975
No 316
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-34 Score=323.32 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=208.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc-------CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (1002)
.+..++|.+.+.||+|+||.||+|.+. .++..+|+|.+.... .......+.+|+.+++.+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 456678999999999999999999753 234589999887532 234456788999999999 8999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
++...+.+|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 9999999999999999999999997632 23477888999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 223 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 223 (304)
T ss_pred EEcCCCcEEECCCccceecccccc-------------------------cccccCCCCCceeeCchhhccCCCCchhhHH
Confidence 999999999999999865421100 0011123466789999999888899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
||||++|+|++ |..||.+.+..+....+.... .......++..+++|+.+||+.+|.+||++.+.
T Consensus 224 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~ 289 (304)
T cd05101 224 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQL 289 (304)
T ss_pred HHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 99999999998 889998887777666654432 333344578899999999999999999994433
No 317
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2e-34 Score=318.18 Aligned_cols=255 Identities=20% Similarity=0.312 Sum_probs=203.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+..++|++++.||.|+||.||+|.+..++. .+++|.+... ........+..|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~- 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG- 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-
Confidence 345689999999999999999999977776 4667766432 123344567778888999999999999998754
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...++++||+++|+|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 56789999999999999997542 45899999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 160 YPDDKK-------------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred cCCCcc-------------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 211100 01123457778999999988889999999999999999998 9999988
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
........ ++......+....++..+.+++.+||..||.+||| +.++++
T Consensus 215 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps----~~el~~ 263 (279)
T cd05111 215 MRPHEVPD-LLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPT----FKELAN 263 (279)
T ss_pred CCHHHHHH-HHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 76655443 33433333434456778999999999999999999 555543
No 318
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=334.05 Aligned_cols=244 Identities=34% Similarity=0.520 Sum_probs=208.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
..+.|.+...+|.|+|+.|-.|.+..+++.+++|++.+.. ....+|+.++... +||||+++++++.++.+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 4678999999999999999999999999999999998652 2334567665554 8999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE-ccCCcEEEEeccCCcccCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl-~~~g~vkL~DFG~a~~~~~~ 824 (1002)
+|||++.|+.|.+.+..... +. ..+..|+.+|+.|+.|||.+|||||||||+|||+ ++.|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999999999998876432 33 6777899999999999999999999999999999 58899999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
..+.+-|..|.|||++....|+.++||||||++||+|++|+.||......
T Consensus 470 ------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 470 ------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred ------------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 12346788999999999999999999999999999999999999876555
Q ss_pred -HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 905 -KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 905 -~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+++.++....+. ..+|..+++||++||+.||.+||+ +.+++.||||
T Consensus 520 ~ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~dP~~Rl~----~~~i~~h~w~ 566 (612)
T KOG0603|consen 520 IEIHTRIQMPKFS----ECVSDEAKDLLQQLLQVDPALRLG----ADEIGAHPWF 566 (612)
T ss_pred HHHHHhhcCCccc----cccCHHHHHHHHHhccCChhhCcC----hhhhccCcch
Confidence 555555444333 457999999999999999999999 9999999999
No 319
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.7e-34 Score=320.13 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=208.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEcC-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..++|++++.||.|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 45689999999999999999999753 67899999987542 234456788899999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCC
Q 001869 742 THVCLITDYCPGGELFLLLDRQP--------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~--------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~N 801 (1002)
+..|+||||+++++|.+++.... ...++...+..++.||+.||+|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999997431 1247888899999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhH
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDI 881 (1002)
|+++.++.++|+|||++....... .........+++.|+|||.+.+..++.++||
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSAD-------------------------YYKASENDAIPIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred eEecCCCceEECccccceecccCc-------------------------cccccCCCccChhhcCHHHHhcCCCCchhHH
Confidence 999999999999999885432110 0011122335677999999988889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
|||||++|+|++ |..||.+.+..+....+...... +....++..+.+||.+||+.||.+|||+.+
T Consensus 216 ~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL-SCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 999999999997 88999888877777666554432 223356789999999999999999999443
No 320
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.1e-35 Score=319.37 Aligned_cols=251 Identities=29% Similarity=0.445 Sum_probs=203.8
Q ss_pred ccccccccCCcEEEEEEEEc----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 672 RPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.+.||.|.||.||+|.+. ..+..|+||.+... ........+.+|+.++++++||||+++++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 35678999999999999997 44678999999542 2444578899999999999999999999999988889999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||++|+|.+++.......++...+..++.||+.||.|||+++|+|+||+|+||+++.++.+||+|||++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999999999886456799999999999999999999999999999999999999999999999999865411100
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
........+...|+|||.+....++.++||||||+++|||++ |+.||...+..+.
T Consensus 159 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~ 214 (259)
T PF07714_consen 159 ------------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI 214 (259)
T ss_dssp ------------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred ------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011223456788999999988889999999999999999999 7899999888887
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...+... ...+....++..+.++|..||..||.+||+ +.+|++
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~li~~C~~~~p~~RPs----~~~i~~ 257 (259)
T PF07714_consen 215 IEKLKQG-QRLPIPDNCPKDIYSLIQQCWSHDPEKRPS----FQEILQ 257 (259)
T ss_dssp HHHHHTT-EETTSBTTSBHHHHHHHHHHT-SSGGGS------HHHHHH
T ss_pred ccccccc-ccceeccchhHHHHHHHHHHcCCChhhCcC----HHHHHh
Confidence 7777443 334444567889999999999999999999 666653
No 321
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-37 Score=365.44 Aligned_cols=260 Identities=28% Similarity=0.474 Sum_probs=219.7
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
-+|+....||.|.||.||.|.+..+|...|+|-+...... ......+.+|..++..++|||+|++|++-...+.++|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 4677788899999999999999999999999988765332 555667888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||.||+|.+++... ...++...+.|..|++.|++|||+.|||||||||.||+++.+|.+|++|||.|..........
T Consensus 1314 EyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred HHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 999999999999773 558888899999999999999999999999999999999999999999999997654321110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC---CCCChhhHHHHHHHHHHHHcCCCCCCCCCh-H
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTR-Q 904 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~~sDIwSlGvil~elltG~~Pf~~~~~-~ 904 (1002)
...-....|||.|||||++.+. +...++|||||||++.||+||+.||...+. .
T Consensus 1392 -----------------------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~ 1448 (1509)
T KOG4645|consen 1392 -----------------------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW 1448 (1509)
T ss_pred -----------------------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh
Confidence 0122357899999999999664 466799999999999999999999987554 3
Q ss_pred HHHHHHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 905 KTFANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 ~~~~~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.++..+-.+ .+++|.. +|.+..+||..||..||..|.+ +.|||+|-|-+.
T Consensus 1449 aIMy~V~~gh~Pq~P~~--ls~~g~dFle~Cl~~dP~~Rw~----~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1449 AIMYHVAAGHKPQIPER--LSSEGRDFLEHCLEQDPKMRWT----ASQLLEHAFGKS 1499 (1509)
T ss_pred HHHhHHhccCCCCCchh--hhHhHHHHHHHHHhcCchhhhH----HHHHHHhhcccc
Confidence 444444333 3445544 8999999999999999999999 889999999765
No 322
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.6e-34 Score=317.80 Aligned_cols=257 Identities=21% Similarity=0.312 Sum_probs=214.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEcC-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
...+|++++.||.|+||.||+|.... +.+.+++|.+.... .......+.+|+.++++++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 80 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA 80 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence 34689999999999999999999754 35689999876432 223456788999999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEe
Q 001869 742 THVCLITDYCPGGELFLLLDRQPT-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~-------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
+..|+||||+++++|.+++..... ..++...+..++.||+.||+|||++||+||||||+||+++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence 999999999999999999976531 1589999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-
Q 001869 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 893 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt- 893 (1002)
||++....... ........+++.|+|||.+.+...+.++||||||+++|+|++
T Consensus 161 ~~~~~~~~~~~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~ 214 (275)
T cd05046 161 LSLSKDVYNSE--------------------------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQ 214 (275)
T ss_pred cccccccCccc--------------------------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence 99875321100 011123356778999999988888899999999999999998
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 894 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|..||.+......+..+......++....++..+.+++.+||+.+|.+||+ +.+++++
T Consensus 215 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~~l~~ 272 (275)
T cd05046 215 GELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPS----FSELVSA 272 (275)
T ss_pred CCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHH
Confidence 889998877777777776666666666668889999999999999999999 7777653
No 323
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.6e-34 Score=313.67 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=207.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++.+.||+|+||.||++.+. .+..+|+|.+... ......+.+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence 466789999999999999999999864 4567999988653 2235678889999999999999999999887 778
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++.......++...+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999999998765566889999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.. .......++..|+|||++....++.++|+|||||++|++++ |..||.+.+.
T Consensus 156 ~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 156 EY--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred Cc--------------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 00 00112245678999999988888999999999999999998 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
......+.. ....+.....+..+.+++.+||+.+|++||++.
T Consensus 210 ~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~ 251 (260)
T cd05073 210 PEVIRALER-GYRMPRPENCPEELYNIMMRCWKNRPEERPTFE 251 (260)
T ss_pred HHHHHHHhC-CCCCCCcccCCHHHHHHHHHHcccCcccCcCHH
Confidence 666555443 334444456788999999999999999999933
No 324
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.6e-34 Score=319.02 Aligned_cols=250 Identities=22% Similarity=0.319 Sum_probs=204.2
Q ss_pred CcccccccccCCcEEEEEEEEcC-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 47889999999999999998753 23578999886542 234456788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 745 CLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~----------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
|+||||+.+++|.+++.... ...++...+..++.|++.||+|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 99999999999999986421 13478899999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
|+++++.+||+|||++........ ........++..|+|||++.+..++.++|||
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 213 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSKGRIPVKWMAIESLFDHIYTTQSDVW 213 (290)
T ss_pred EEcCCCcEEeccccccccccCccc-------------------------hhcccCCCCCccccCHHHHccCCcchHhHHH
Confidence 999999999999999864321110 0011123456789999999888899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
||||++|+|++ |..||.+......... .......+....++..+.+|+.+||+.+|.+||++.+
T Consensus 214 slG~~l~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~ 278 (290)
T cd05045 214 SFGVLLWEIVTLGGNPYPGIAPERLFNL-LKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFAD 278 (290)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHH-HhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 99999999998 9999988776665544 3443444445567889999999999999999999443
No 325
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2e-34 Score=316.14 Aligned_cols=257 Identities=23% Similarity=0.324 Sum_probs=210.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCe---EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
...|++.+.||+|+||.||+|.+..+++ .||||++.... .......+..|+.+++.++||||+++++++..+...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4579999999999999999999877664 69999987542 344567888999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
++||||+.+++|.+++.... ..++...++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999987643 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.... .........++..|+|||++.+..++.++|||||||++|++++ |..||.+.+.
T Consensus 160 ~~~~----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~ 217 (269)
T cd05065 160 TSDP----------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 217 (269)
T ss_pred cccc----------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH
Confidence 1000 0000011123467999999998889999999999999999886 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......+. .....+....++..+.+++.+||..+|.+||+ +.+++.
T Consensus 218 ~~~~~~i~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 263 (269)
T cd05065 218 QDVINAIE-QDYRLPPPMDCPTALHQLMLDCWQKDRNARPK----FGQIVS 263 (269)
T ss_pred HHHHHHHH-cCCcCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 76666654 33445555567889999999999999999999 666654
No 326
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.6e-34 Score=314.89 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=208.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCe---EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
..+.|+..+.||+|+||.||+|.+..++. .+|+|.+.... .......+..|+++++.++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 45678899999999999999999876554 79999886542 23345678889999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.|+||||+++++|.+++.... ..++...+..++.|++.||+|||+.||+|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999997643 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
.... .........++.|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 160 ~~~~------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~ 215 (268)
T cd05063 160 DPEG------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS 215 (268)
T ss_pred cccc------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC
Confidence 1100 000111223567999999988888999999999999999997 999998877
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
..+....+.. ....+....++..+.+|+.+||+.+|.+||++.+
T Consensus 216 ~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~ 259 (268)
T cd05063 216 NHEVMKAIND-GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVD 259 (268)
T ss_pred HHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 7766666654 3445555567889999999999999999999433
No 327
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.2e-34 Score=312.34 Aligned_cols=246 Identities=22% Similarity=0.318 Sum_probs=200.3
Q ss_pred cccccCCcEEEEEEEEcCCC---eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecC
Q 001869 675 KPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
+.||+|+||.||+|.+..++ ..+|+|.+...... .....+.+|+.+++.++||||+++++++. .+.+++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46899999999999875554 78999998765432 44567888999999999999999999876 45689999999
Q ss_pred CCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCc
Q 001869 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (1002)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (1002)
.+++|.+++.... .+++..+..++.|++.||+|||.+|++|+||||+|||++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~---- 151 (257)
T cd05060 78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY---- 151 (257)
T ss_pred CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc----
Confidence 9999999998753 5899999999999999999999999999999999999999999999999998654311100
Q ss_pred chhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001869 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 910 (1002)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i 910 (1002)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+
T Consensus 152 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05060 152 --------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML 211 (257)
T ss_pred --------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 000111224568999999998889999999999999999997 99999887776665555
Q ss_pred HhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 911 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 911 ~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
... ...+....++..++++|.+||..+|.+||+..+.++
T Consensus 212 ~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 212 ESG-ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HcC-CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 443 233444557889999999999999999999444333
No 328
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.4e-34 Score=322.90 Aligned_cols=259 Identities=25% Similarity=0.353 Sum_probs=209.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (1002)
..++|++.+.||+|+||.||+|.+..+++.||+|.++.... .......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35789999999999999999999999999999999875422 2223346678999999999999999999987654
Q ss_pred ------eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEecc
Q 001869 743 ------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 743 ------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
.+|+||||+++ +|..++... ...+++..++.++.||+.||+|||+.||+|+||||+||+++.++.+||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 89999999965 777777654 3458999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCC
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~ 895 (1002)
++........ .......+++.|+|||.+.+ ..++.++|||||||++|+|++|+
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 162 LARLYNSEES--------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred ccccccCCcc--------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9865431110 01112346788999998865 35688999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhC---CC--CCC-----------------------CCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 896 TPFRGKTRQKTFANILHK---DL--KFP-----------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~---~~--~~~-----------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+||...+....+..+... .. .++ ....++..+.+||.+||+.||.+||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~--- 292 (302)
T cd07864 216 PIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT--- 292 (302)
T ss_pred CCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC---
Confidence 999887766655554431 00 000 11235788999999999999999999
Q ss_pred cHHHHHcCCCc
Q 001869 948 GANEIKKHPFF 958 (1002)
Q Consensus 948 ~a~elL~Hp~f 958 (1002)
+.+++.||||
T Consensus 293 -~~~il~~~~~ 302 (302)
T cd07864 293 -AEEALNSPWL 302 (302)
T ss_pred -HHHHhcCCCC
Confidence 9999999997
No 329
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1e-34 Score=320.34 Aligned_cols=254 Identities=28% Similarity=0.499 Sum_probs=211.0
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|++.+.||.|++|.||+|.+..+++.+++|.+..... .......+..|+.+++.++|+||+++++++..++.+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999999999999999876532 223456778899999999999999999999999999999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+. ++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 80 MD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred cC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 95 58888886643 468999999999999999999999999999999999999999999999999885543111
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.+.+..+.+..
T Consensus 153 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~ 210 (283)
T cd05118 153 ----------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK 210 (283)
T ss_pred ----------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011124578899999998776 788899999999999999999999988777665555
Q ss_pred HHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 910 ILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+.... ..++. ...++.++.+||.+||+.||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~ll~~~~~ 283 (283)
T cd05118 211 IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT----AEQALAHPYF 283 (283)
T ss_pred HHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcC----HHHHhhCCCC
Confidence 43210 00000 1235778999999999999999999 9999999997
No 330
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.1e-34 Score=318.43 Aligned_cols=255 Identities=27% Similarity=0.434 Sum_probs=209.2
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEEEEE
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLIT 748 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~~~lV~ 748 (1002)
|++++.||.|+||.||+|.+..+++.+|+|.+.... ........+.+|+.+++.++|||++++++++... +..|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 678899999999999999999999999999998653 2333445678899999999999999999999887 8999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||++ ++|..++.... ..+++..++.++.||+.||+|||++|++|+||||+||++++++.+||+|||++........
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred cccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9996 58888886542 4689999999999999999999999999999999999999999999999999865432110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+....+
T Consensus 156 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~ 211 (287)
T cd07840 156 ------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL 211 (287)
T ss_pred ------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01122356888999998765 45788999999999999999999999887766655
Q ss_pred HHHHhCCC-----CCCC-----------------------CCC-CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 908 ANILHKDL-----KFPS-----------------------STP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 908 ~~i~~~~~-----~~~~-----------------------~~~-~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..+..... .++. ... ++..+.++|.+||+.+|.+||+ ++++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~~~~ 287 (287)
T cd07840 212 EKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRIS----ADQALQHEYF 287 (287)
T ss_pred HHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcC----HHHHhhCcCC
Confidence 55443110 0000 011 3778899999999999999999 9999999998
No 331
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-34 Score=322.82 Aligned_cols=255 Identities=22% Similarity=0.314 Sum_probs=206.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcC-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (1002)
.+..++|.+.+.||+|+||.||+|.+.. ....+|+|.++... .......+..|+.+++.+ +||||+++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 3455789999999999999999998632 34579999987532 234456788899999999 6999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
++...+.+|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 165 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV 165 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence 9999999999999999999999997532 23588899999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 220 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDY-------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSDVW 220 (314)
T ss_pred EEcCCCcEEEcccccccccccccc-------------------------ccccccCCCCccccCHHHHccCCcCccchhh
Confidence 999999999999999864321100 0001112345679999999988899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
||||++|+|++ |..||.+......+..+.... .......++..+++|+.+||..||.+||++.+
T Consensus 221 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 285 (314)
T cd05099 221 SFGILMWEIFTLGGSPYPGIPVEELFKLLREGH-RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQ 285 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 99999999998 999998887777666655443 22233456788999999999999999999433
No 332
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.4e-34 Score=325.99 Aligned_cols=261 Identities=25% Similarity=0.375 Sum_probs=207.2
Q ss_pred CcccccccccCCcEEEEEEEEcCC--CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEe----CC
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----KT 742 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~----~~ 742 (1002)
+|++.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488899999999999999999888 8999999987532 2233455677899999999 59999999987532 35
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|++++|+ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 689999999 57899888653 458999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
..... .........|++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.
T Consensus 157 ~~~~~-----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 157 ENPGE-----------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred ccccc-----------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 11100 0011234578999999998765 56788999999999999999999999876
Q ss_pred ChHHHHHHHHhCC----------------------------CCCC-CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 902 TRQKTFANILHKD----------------------------LKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~~~~~~~~i~~~~----------------------------~~~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+....+..++... ..+. .....+..+.+|+.+||+.||.+||| +.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~l 289 (332)
T cd07857 214 DYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRIS----VEEA 289 (332)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCC----HHHH
Confidence 6544443332210 0011 11235778999999999999999999 9999
Q ss_pred HcCCCcCCC
Q 001869 953 KKHPFFKGV 961 (1002)
Q Consensus 953 L~Hp~f~~~ 961 (1002)
++||||+..
T Consensus 290 l~~~~~~~~ 298 (332)
T cd07857 290 LEHPYLAIW 298 (332)
T ss_pred hcChhhhhh
Confidence 999999753
No 333
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-35 Score=352.93 Aligned_cols=258 Identities=21% Similarity=0.340 Sum_probs=219.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCC-----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
+.....++++.||+|.||.||.+....-. ..||||.+++. .+......|++|..+|+.++|||||++++++.+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 34456778899999999999999875432 34899988764 467788999999999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEec
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
....+|++|||.||+|..+|+.. ....++...+..++.||++|+.||+++++|||||...|+|++....|||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999999864 1345899999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-C
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 894 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G 894 (1002)
|+|+.+..... .+. ...-.-...|||||.+....++.++|||||||+|||+++ |
T Consensus 847 GlArDiy~~~y----------yr~---------------~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG 901 (1025)
T KOG1095|consen 847 GLARDIYDKDY----------YRK---------------HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLG 901 (1025)
T ss_pred chhHhhhhchh----------eec---------------cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCC
Confidence 99974321110 000 001123457999999999999999999999999999997 9
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 895 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
..||.+.+..+.+...+.+. .++.+..|+..+.++|..||+.+|++||+|...+++
T Consensus 902 ~~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q 957 (1025)
T KOG1095|consen 902 ATPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQ 957 (1025)
T ss_pred CCCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhh
Confidence 99999999999988788776 777777899999999999999999999997655443
No 334
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.5e-34 Score=323.79 Aligned_cols=268 Identities=26% Similarity=0.377 Sum_probs=208.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++.+.||.|+||.||+|.+..+++.+|+|.+......+ .....+.+|+++++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 579999999999999999999999999999999987543222 1223566899999999999999999987543
Q ss_pred --CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 742 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 742 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
..+|+||||+. ++|...+... ...+++..++.++.||++||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 35799999994 5677766543 3469999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
........... .............|++.|+|||.+.+. .++.++|||||||++|+|++|++||
T Consensus 164 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 164 PYDGPPPNPKG----------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred hccCCCccccc----------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 54321110000 000011122345789999999988654 5788999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCC-----C------------------C-----CCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 899 RGKTRQKTFANILHKDLK-----F------------------P-----SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~-----~------------------~-----~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
.+.+.......+...... + + .....+..+.+||.+||+.||.+||| +.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~ 303 (311)
T cd07866 228 QGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLT----AS 303 (311)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcC----HH
Confidence 988776665554431000 0 0 00123457889999999999999999 99
Q ss_pred HHHcCCCc
Q 001869 951 EIKKHPFF 958 (1002)
Q Consensus 951 elL~Hp~f 958 (1002)
+++.||||
T Consensus 304 ell~~~~f 311 (311)
T cd07866 304 DALEHPYF 311 (311)
T ss_pred HHhcCCCC
Confidence 99999998
No 335
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.6e-34 Score=320.06 Aligned_cols=254 Identities=25% Similarity=0.356 Sum_probs=203.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcC----------------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 731 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 731 (1002)
.++|++.+.||+|+||.||++.+.. ++..+|+|.+.... .......+.+|+.+++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 3579999999999999999986532 34578999987542 33445678899999999999999
Q ss_pred ceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPT---------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
+++++++...+.+|+||||+.+++|.+++..... ..++...+..++.||+.||+|||++||+|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999999999999999999999999999875321 2467788999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.++.++|+|||++....... .........+++.|++||+..+..++.++|||
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred EEcCCCCEEeccCcccccccCCc-------------------------ceeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 99999999999999986432110 00111223456789999998888899999999
Q ss_pred HHHHHHHHHHc--CCCCCCCCChHHHHHHHHh------CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 883 ALGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 883 SlGvil~ellt--G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
||||++|+|++ |..||...+..+.+..... .....+....++..+.+|+..||+.||.+||++.+.
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i 290 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEI 290 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 99999999997 7899987666555443321 112233444577899999999999999999994443
No 336
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.2e-34 Score=316.02 Aligned_cols=256 Identities=29% Similarity=0.466 Sum_probs=212.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 588999999999999999999888777878777643221 222344566789999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 748 TDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
|||+++++|.+++.. .....+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~- 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS- 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-
Confidence 999999999998864 23356899999999999999999999999999999999999974 67999999988543211
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus 159 --------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~ 212 (260)
T cd08222 159 --------------------------CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212 (260)
T ss_pred --------------------------cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 011223468889999999988888889999999999999999999998877766
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
....+.....+. ....++.++.++|.+||..||.+||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 260 (260)
T cd08222 213 VVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPS----AAEILRNPFI 260 (260)
T ss_pred HHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcC----HHHHhhCCCC
Confidence 666665543222 22356789999999999999999999 9999999997
No 337
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.8e-34 Score=327.65 Aligned_cols=263 Identities=28% Similarity=0.426 Sum_probs=211.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC--CeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~--~~~ 744 (1002)
.++|++.+.||+|+||.||+|.+..++..+|+|.+.... ........+..|+.+++++ +||||+++++++... ..+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 468999999999999999999998899999999886532 2333445677899999999 999999999998653 468
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+. ++|..++... .+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999995 6999888653 5888899999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.... .........|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+...
T Consensus 161 ~~~~----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~ 218 (337)
T cd07852 161 EENP----------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST 218 (337)
T ss_pred cccc----------------------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh
Confidence 1000 0011223568999999998765 4577899999999999999999999987665
Q ss_pred HHHHHHHHhCCCC----------------------------C-CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 904 QKTFANILHKDLK----------------------------F-PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 904 ~~~~~~i~~~~~~----------------------------~-~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......+...... . .....++.++.+||.+||+.||.+||| +.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps----~~~il~ 294 (337)
T cd07852 219 LNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLT----AEEALE 294 (337)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccC----HHHHhh
Confidence 5544433221100 0 011235788999999999999999999 999999
Q ss_pred CCCcCCC
Q 001869 955 HPFFKGV 961 (1002)
Q Consensus 955 Hp~f~~~ 961 (1002)
||||+.+
T Consensus 295 ~~~~~~~ 301 (337)
T cd07852 295 HPYVAQF 301 (337)
T ss_pred Chhhhhh
Confidence 9999985
No 338
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.4e-34 Score=320.32 Aligned_cols=261 Identities=27% Similarity=0.424 Sum_probs=210.9
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
+.+..+.|++.+.||.|+||.||+|.+..+++.||||.+++.. .......+..|+.++..+ +||||+++++++....
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~ 87 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS 87 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC
Confidence 3466789999999999999999999998889999999987542 222344566677766666 5999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||+ .||+||||+|+||+++.++.+||+|||++...
T Consensus 88 ~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 88 DVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred eEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 999999999 557777776532 468999999999999999999997 59999999999999999999999999988543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~~sDIwSlGvil~elltG~~P 897 (1002)
.... ......+++.|+|||.+.+.. ++.++||||||+++|+|++|+.|
T Consensus 166 ~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 217 (296)
T cd06618 166 VDSK----------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFP 217 (296)
T ss_pred cCCC----------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCC
Confidence 2110 011234788999999987554 77899999999999999999999
Q ss_pred CCCCCh-HHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 898 FRGKTR-QKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 898 f~~~~~-~~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
|..... .+.+..+..... .++....++.++.+|+.+||+.||.+||+ +.++++||||..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~ 278 (296)
T cd06618 218 YKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK----YRELLQHPFIRR 278 (296)
T ss_pred CCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhc
Confidence 976433 344555554432 23333346788999999999999999999 999999999986
No 339
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-34 Score=325.81 Aligned_cols=262 Identities=21% Similarity=0.306 Sum_probs=210.0
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCC-------CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceE
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 734 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l 734 (1002)
.+.+...+|++++.||+|+||.||+|.+... +..+|+|.+... ........+.+|+.+++++ +||||+++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 3456667899999999999999999987432 237899987743 2334456788999999999 79999999
Q ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCC
Q 001869 735 YASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (1002)
Q Consensus 735 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~ 800 (1002)
++++...+.+|+||||+++++|.+++.... ...++...+..++.||+.||+|||++||+||||||+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999999999999997532 234778888999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhh
Q 001869 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (1002)
Q Consensus 801 NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sD 880 (1002)
|||++.++.+||+|||++........ ........++..|+|||++.+..++.++|
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSD 218 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc-------------------------cccccCCCcCceEcCHHHhccCCcCchhh
Confidence 99999999999999999854321100 00011223456799999999998999999
Q ss_pred HHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 881 WWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 881 IwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
||||||++|+|++ |..||.+.+..+.+..+... ...+....++..+.+|+.+||+.+|.+||++.+.+..+
T Consensus 219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 9999999999998 89999888777766655543 23333345678999999999999999999944443333
No 340
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.6e-34 Score=316.63 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=197.1
Q ss_pred Cc-ccccccccCCcEEEEEEEE----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CC
Q 001869 670 HF-RPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KT 742 (1002)
Q Consensus 670 ~y-~i~~~LG~G~~g~Vy~a~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~ 742 (1002)
+| ++++.||+|+||+||++.. ..++..+|+|.+.... .......+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 45 9999999999999988653 4568899999987542 22345677889999999999999999998765 34
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+.+++|.+++... .+++..++.++.|++.||.|||++||+|+||||+|||++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 689999999999999999763 48999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
..... ........++..|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus 159 ~~~~~------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 214 (283)
T cd05080 159 EGHEY------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP 214 (283)
T ss_pred Ccchh------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCc
Confidence 11000 001112245667999999988889999999999999999999999986533
Q ss_pred hH--------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 903 RQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~--------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.. .............+....++..+.+++.+||+.||++||| +++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~~i~ 275 (283)
T cd05080 215 KKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPT----FRSLI 275 (283)
T ss_pred chhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCC----HHHHH
Confidence 21 0111112222223334456789999999999999999999 55554
No 341
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.3e-34 Score=316.64 Aligned_cols=253 Identities=30% Similarity=0.477 Sum_probs=207.1
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEe
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
|++.+.||.|++|.||+|.+..+++.++||.+..... . .......+|+..++++. ||||+++++++..++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6788999999999999999988999999999875422 1 22234456888999998 9999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|+ +++|.+++.......++...+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 889999988765456899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.......|+..|+|||++.+ ..++.++|+||||+++|+|++|++||........+.
T Consensus 153 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~ 209 (283)
T cd07830 153 -----------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY 209 (283)
T ss_pred -----------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence 01123468889999998854 457889999999999999999999998877665554
Q ss_pred HHHhCC-------------------CCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 909 NILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 909 ~i~~~~-------------------~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
.+...- ..++. ....+..+.+||.+||+.||.+||| +++++.||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~~~~~ 283 (283)
T cd07830 210 KICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT----ASQALQHPYF 283 (283)
T ss_pred HHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC----HHHHhhCCCC
Confidence 443210 00000 0123577899999999999999999 9999999997
No 342
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.4e-34 Score=314.74 Aligned_cols=255 Identities=22% Similarity=0.372 Sum_probs=201.6
Q ss_pred cCCcccccccccCCcEEEEEEEE----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--C
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 741 (1002)
..+|++++.||+|+||.||++.. ..++..||+|.+... .......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 35899999999999999999973 457889999998653 34455678899999999999999999998753 4
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+++++|.+++.... ..++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 57899999999999999997542 35899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
...... ........++..|+|||++.+..++.++|||||||++|+|++|..|+...
T Consensus 159 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~ 214 (284)
T cd05081 159 PQDKEY------------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSP 214 (284)
T ss_pred cCCCcc------------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCc
Confidence 321100 00011123455699999999888999999999999999999987776432
Q ss_pred ChH---------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 902 TRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 902 ~~~---------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
... ..+..++.....++....++..+.+|+.+||..+|++||| +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~ 278 (284)
T cd05081 215 PAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPS----FSELAL 278 (284)
T ss_pred chhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence 211 1112233334444555567889999999999999999999 666543
No 343
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=7.3e-34 Score=313.50 Aligned_cols=254 Identities=22% Similarity=0.298 Sum_probs=208.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
...+|++++.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++.. .
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 35689999999999999999999876654 68999876543 24455678889999999999999999999887 7
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
..++||||+.+++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.+||+|||++....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 8999999999999999997653 348999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
..... .......++..|+|||.+....++.++|+|||||++|++++ |..||.+.
T Consensus 161 ~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 215 (279)
T cd05057 161 VDEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI 215 (279)
T ss_pred Ccccc-------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 11100 00011224568999999988888999999999999999998 99999888
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
...+....+... ..++....++..+.+++.+||..||.+||++.+.++
T Consensus 216 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 216 PAVEIPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 777666555543 344444557889999999999999999999554433
No 344
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.8e-34 Score=316.70 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=202.6
Q ss_pred CCcccccccccCCcEEEEEEEE----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--C
Q 001869 669 QHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~ 742 (1002)
..|++++.||+|+||.||+|.. ..++..||+|.++... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4689999999999999999984 4568899999987542 334456788999999999999999999998764 6
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+++||||++|++|.+++.... ..++...+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 7899999999999999987542 358999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
..... ........|+..|+|||++.+..++.++|||||||++|+|+++..|+....
T Consensus 161 ~~~~~------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~ 216 (284)
T cd05079 161 TDKEY------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM 216 (284)
T ss_pred cCccc------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc
Confidence 11100 011123457778999999988889999999999999999999877653211
Q ss_pred --------------hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 903 --------------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 903 --------------~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
........+......+....++..+.+|+.+||+.||.+||+ +.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 278 (284)
T cd05079 217 TLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT----FQNLIE 278 (284)
T ss_pred chhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 111112223333344445567889999999999999999999 666654
No 345
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4e-34 Score=311.00 Aligned_cols=241 Identities=22% Similarity=0.348 Sum_probs=201.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++.+.||+|+||.||++.. +++.+|+|.+.... ....+.+|+.+++.++||||+++++++... ..|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 456899999999999999999874 77889999886532 235678899999999999999999998764 4799
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+.+++|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-- 153 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence 999999999999998765556899999999999999999999999999999999999999999999999988532100
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~ 905 (1002)
......+..|+|||.+.+..++.++|+|||||++|+|++ |..||...+..+
T Consensus 154 ----------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 205 (254)
T cd05083 154 ----------------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE 205 (254)
T ss_pred ----------------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence 011234567999999988889999999999999999997 999998887766
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
....+... ...+....++..+.+|+.+||+.+|.+||++.
T Consensus 206 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 245 (254)
T cd05083 206 VKECVEKG-YRMEPPEGCPADVYVLMTSCWETEPKKRPSFH 245 (254)
T ss_pred HHHHHhCC-CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHH
Confidence 65555443 33333445788999999999999999999933
No 346
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.3e-34 Score=309.36 Aligned_cols=244 Identities=21% Similarity=0.290 Sum_probs=197.4
Q ss_pred ccccCCcEEEEEEEEc--CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCC
Q 001869 676 PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 753 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~g 753 (1002)
.||+|+||.||+|.+. .++..+|+|++.... .......+.+|+.++++++||||+++++++.. +..++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 3899999999999774 446679999886542 34445678899999999999999999998754 578999999999
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
++|.+++... ...+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||++.........
T Consensus 79 ~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~------ 151 (257)
T cd05115 79 GPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY------ 151 (257)
T ss_pred CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccc------
Confidence 9999998753 245899999999999999999999999999999999999999999999999998643211100
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~ 912 (1002)
........+++.|+|||++.+..++.++|||||||++|++++ |..||.+.........+..
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 213 (257)
T cd05115 152 ------------------YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213 (257)
T ss_pred ------------------eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC
Confidence 000111224678999999988889999999999999999996 9999998887776655554
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 913 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 913 ~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
+. ..+....++.++.++|.+||..||++||++.+.
T Consensus 214 ~~-~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i 248 (257)
T cd05115 214 GK-RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKV 248 (257)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 33 233334568899999999999999999995443
No 347
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=317.17 Aligned_cols=268 Identities=28% Similarity=0.463 Sum_probs=222.2
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh----hHHHHHHHHHHHHHhCCCCCcceEEEEEE-eC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----NKVHRACAEREILDMLDHPFVPALYASFQ-TK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~ 741 (1002)
..++|-++..||+|||+.||+|.|....++||+|+-........ .-.+...+|..|-+.|+||.||++|++|. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 34789999999999999999999999999999998764432211 22345678999999999999999999996 67
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--CcccCCCCCCCEEEcc---CCcEEEEecc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG---NGHVSLTDFD 816 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--gIiHrDLKP~NILl~~---~g~vkL~DFG 816 (1002)
+.+|-|+|||+|.+|..||+.+ +.+++..++.|+.||+.||.||... .|||-||||.|||+.. .|.+||.|||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 8899999999999999999875 5699999999999999999999987 5999999999999964 4789999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC----CCCChhhHHHHHHHHHHHH
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----~~~~~sDIwSlGvil~ell 892 (1002)
+++.++.+.... ......+....||.+|++||++.-+ ..+.++||||+|||+|.++
T Consensus 619 LSKIMdddSy~~--------------------vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQCl 678 (775)
T KOG1151|consen 619 LSKIMDDDSYNS--------------------VDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCL 678 (775)
T ss_pred hhhhccCCccCc--------------------ccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhh
Confidence 999987553321 1223345567899999999998543 4567999999999999999
Q ss_pred cCCCCCCCCChHH-HHH--HHH-hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 893 YGYTPFRGKTRQK-TFA--NIL-HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 893 tG~~Pf~~~~~~~-~~~--~i~-~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.|+-||....... +++ .|+ .....||..+..++++++||++||++.-+.|.. +.+|.+||||..
T Consensus 679 YGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~D----V~qLA~dpyllP 746 (775)
T KOG1151|consen 679 YGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRID----VQQLACDPYLLP 746 (775)
T ss_pred ccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhh----HHHHccCccccc
Confidence 9999997643322 221 222 235678888889999999999999999999999 999999999986
No 348
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=7.5e-34 Score=313.49 Aligned_cols=255 Identities=19% Similarity=0.217 Sum_probs=208.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcC----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCG----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 740 (1002)
+..++|++.+.||+|+||.||+|.+.. ++..+++|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 445789999999999999999999866 3688999987643 244556778899999999999999999998765
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEe
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPT------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
+...+++++|+.+++|.+++..... ..++...+..++.||+.||+|||+++++|+||||+||+++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 5788999999999999999875422 4589999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-
Q 001869 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 893 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt- 893 (1002)
||+++.+...... .......++..|+|||++.+..++.++|||||||++|++++
T Consensus 161 ~g~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 161 NALSRDLFPMDYH-------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred CCCcccccCCceE-------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC
Confidence 9998654321110 00112345678999999998889999999999999999998
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 894 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|..||...+..+....+ .....++....++..+.+++.+||+.||++|||+.+.
T Consensus 216 g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 269 (280)
T cd05043 216 GQTPYVEIDPFEMAAYL-KDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQL 269 (280)
T ss_pred CCCCcCcCCHHHHHHHH-HcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 99999887766654443 3344444455578899999999999999999994433
No 349
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.9e-34 Score=315.52 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=210.5
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|++.+.||+|++|.||+|.+..+++.||+|.+.... ........+..|+.+++.++|+||+++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 677889999999999999999999999999998653 2233445677899999999999999999999999999999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+. ++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~----- 152 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL----- 152 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-----
Confidence 96 68999997642 459999999999999999999999999999999999999999999999999885432110
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
.......++..|+|||.+.+. .++.++|||||||++|+|++|.+||.+.+....+.+
T Consensus 153 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~ 210 (282)
T cd07829 153 ----------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFK 210 (282)
T ss_pred ----------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 011223567889999998776 788899999999999999999999988776665554
Q ss_pred HHhC------------------CCCCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 910 ILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 910 i~~~------------------~~~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+... ...++. ....+..+.++|.+||..||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~p~~ 282 (282)
T cd07829 211 IFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS----AKEALKHPYF 282 (282)
T ss_pred HHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC----HHHHhhCcCC
Confidence 4321 001111 1224678999999999999999999 9999999998
No 350
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.5e-34 Score=308.50 Aligned_cols=250 Identities=21% Similarity=0.344 Sum_probs=206.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
..+|++.+.||.|+||.||++.+. .+..+|+|.+..... ....+.+|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 357899999999999999999885 467899998875432 234678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.+++|.+++.... ..+++..++.++.|++.||+|||+++++|+||||+||+++.++.+||+|||++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc--
Confidence 99999999999987543 358899999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~ 906 (1002)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||........
T Consensus 155 ------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 210 (256)
T cd05112 155 ------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV 210 (256)
T ss_pred ------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 001112335678999999988889999999999999999998 9999988777766
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
...+.... ........+..+.+|+.+||+.+|.+||| +.++++
T Consensus 211 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~~l~ 253 (256)
T cd05112 211 VETINAGF-RLYKPRLASQSVYELMQHCWKERPEDRPS----FSLLLH 253 (256)
T ss_pred HHHHhCCC-CCCCCCCCCHHHHHHHHHHcccChhhCCC----HHHHHH
Confidence 66655432 22223346788999999999999999999 677665
No 351
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.5e-33 Score=305.39 Aligned_cols=243 Identities=23% Similarity=0.354 Sum_probs=199.2
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||+|+||.||++.. .++..+|+|.++... .......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 3689999999999986 468899999887542 2333456888999999999999999999999999999999999999
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++.... ..+++..+..++.|++.+|.|||++|++|+||||+||+++.++.+||+|||++.......
T Consensus 78 ~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--------- 147 (250)
T cd05085 78 DFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI--------- 147 (250)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc---------
Confidence 9999987543 458899999999999999999999999999999999999999999999999885322100
Q ss_pred hhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001869 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (1002)
........+++.|+|||++.+..++.++||||||+++|++++ |..||.+.........+...
T Consensus 148 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~ 210 (250)
T cd05085 148 -----------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210 (250)
T ss_pred -----------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence 000112234678999999988888999999999999999998 99999888776666555443
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
........++..+.+|+.+||+.+|++||++.+.
T Consensus 211 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l 244 (250)
T cd05085 211 -YRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSEL 244 (250)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 2223334578899999999999999999994333
No 352
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1e-33 Score=307.52 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=210.4
Q ss_pred cccccccccCCcEEEEEEEEcCCC----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
+++.+.||.|+||.||++.+...+ ..+|+|.+.... .......+..|+.+++.++|+||+++++++.+.+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 456788999999999999998766 899999986542 22256788899999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
+|||+++++|.+++.......+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999999765433389999999999999999999999999999999999999999999999999865431100
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~ 905 (1002)
.......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+...
T Consensus 159 --------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~ 212 (258)
T smart00219 159 --------------------------YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE 212 (258)
T ss_pred --------------------------cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 00001226789999999988889999999999999999998 899998877777
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.+..+..... .+....++..+.+++.+||..||.+||| +.++++
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~ 256 (258)
T smart00219 213 VLEYLKKGYR-LPKPENCPPEIYKLMLQCWAEDPEDRPT----FSELVE 256 (258)
T ss_pred HHHHHhcCCC-CCCCCcCCHHHHHHHHHHCcCChhhCcC----HHHHHh
Confidence 7776665443 2333447889999999999999999999 888775
No 353
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.1e-33 Score=306.59 Aligned_cols=246 Identities=26% Similarity=0.367 Sum_probs=203.0
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+.||.|+||.||++.+.. ++.||+|.+..... ......+.+|+.+++.++||||+++++++......|+||||+.++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999977 99999998876432 245567889999999999999999999999999999999999999
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchh
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 834 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 834 (1002)
+|.+++.... ..++...+..++.+++.||+|||++|++||||||+||+++.++.+||+|||++.........
T Consensus 78 ~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~------- 149 (251)
T cd05041 78 SLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT------- 149 (251)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-------
Confidence 9999986542 35889999999999999999999999999999999999999999999999998543210000
Q ss_pred hhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001869 835 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 913 (1002)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~ 913 (1002)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+..
T Consensus 150 ------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~- 210 (251)
T cd05041 150 ------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES- 210 (251)
T ss_pred ------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-
Confidence 00112234667999999988889999999999999999998 8999988776555554433
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 914 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 914 ~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
....+.....+..+.+++.+||+.+|.+||+ +.++++
T Consensus 211 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~ell~ 247 (251)
T cd05041 211 GYRMPAPQLCPEEIYRLMLQCWAYDPENRPS----FSEIYN 247 (251)
T ss_pred CCCCCCCccCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 2333334456889999999999999999999 777764
No 354
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.3e-33 Score=310.06 Aligned_cols=242 Identities=23% Similarity=0.332 Sum_probs=197.1
Q ss_pred ccccCCcEEEEEEEEcCCCe--EEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecCC
Q 001869 676 PLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
.||+|+||.||++.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|+||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999999987775 4688887642 2334456788899999999 89999999999999999999999999
Q ss_pred CCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 753 GGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 753 ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+++|.+++.... ...++...+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 999999997532 124789999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~P 897 (1002)
...... ........++.|+|||++....++.++|||||||++|+|++ |..|
T Consensus 160 ~~~~~~----------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~p 211 (270)
T cd05047 160 RGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 211 (270)
T ss_pred cccchh----------------------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 421100 00011224567999999988889999999999999999996 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|.+.+....+..+... ...+....++..+.+|+.+||+.||.+|||+.+.
T Consensus 212 f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 212 YCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred ccccCHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 9887776666655443 2223334567889999999999999999994433
No 355
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.6e-34 Score=308.35 Aligned_cols=233 Identities=32% Similarity=0.476 Sum_probs=190.6
Q ss_pred CCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcHHHH
Q 001869 680 GDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLL 759 (1002)
Q Consensus 680 G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~ 759 (1002)
|.+|.||+|.+..+++.||+|.+++.. ....|...+....||||+++++++...+.+|+||||+.|++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999987642 223344455556799999999999999999999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcc
Q 001869 760 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 839 (1002)
Q Consensus 760 l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 839 (1002)
+... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||.+......
T Consensus 76 l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--------------- 138 (237)
T cd05576 76 ISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--------------- 138 (237)
T ss_pred HHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---------------
Confidence 8764 34899999999999999999999999999999999999999999999999987432210
Q ss_pred cCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCC
Q 001869 840 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS 919 (1002)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 919 (1002)
.....++..|+|||.+.+..++.++|+||+||++|+|++|..||...... ......+..
T Consensus 139 ---------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~~~~~~ 197 (237)
T cd05576 139 ---------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------INTHTTLNI 197 (237)
T ss_pred ---------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------cccccccCC
Confidence 11234567899999998888899999999999999999999987543211 111111112
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCc
Q 001869 920 STPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFF 958 (1002)
Q Consensus 920 ~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f 958 (1002)
...++..+++||.+||+.||.+||+.. ..++++++||||
T Consensus 198 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 198 PEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 234678899999999999999999953 246999999998
No 356
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4e-34 Score=311.94 Aligned_cols=238 Identities=20% Similarity=0.300 Sum_probs=191.7
Q ss_pred cccccCCcEEEEEEEEcCCCe-------EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 675 KPLGSGDTGSVHLVELCGSGQ-------YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~-------~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+.||.|+||.||+|.+...+. .+++|.+... .......+..|..+++.++||||+++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999999865543 3888877543 234456778899999999999999999999998999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc--------EEEEeccCCc
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSLTDFDLSC 819 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~--------vkL~DFG~a~ 819 (1002)
|||+++|+|..++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++. ++++|||++.
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999999997643 35899999999999999999999999999999999999987764 6999999874
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCC-CC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGY-TP 897 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~-~P 897 (1002)
... ......+++.|+|||++.+ ..++.++|||||||++|+|++|. +|
T Consensus 157 ~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~ 205 (258)
T cd05078 157 TVL-------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP 205 (258)
T ss_pred ccC-------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 321 1123467889999999976 45788999999999999999984 66
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|...+.... .........+|. ..+.++.+||.+||+.||.+||| ++++++
T Consensus 206 ~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 255 (258)
T cd05078 206 LSALDSQKK-LQFYEDRHQLPA--PKWTELANLINQCMDYEPDFRPS----FRAIIR 255 (258)
T ss_pred hhhccHHHH-HHHHHccccCCC--CCcHHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 665554433 233333334433 35678999999999999999999 777765
No 357
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.3e-33 Score=309.94 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=206.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
...+|.+.+.||+|+||.||+|.+... ...++||...... .......+.+|+.+++.++||||+++++++.+ +.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 346799999999999999999987543 4578999876542 24456678899999999999999999998876 55
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.|+||||+++++|.+++.... ..++...+..++.||+.||+|||++|++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 789999999999999997643 3589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
... .......+++.|+|||.+.+..++.++|||||||++|++++ |..||.+.+
T Consensus 160 ~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 213 (270)
T cd05056 160 ESY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK 213 (270)
T ss_pred ccc--------------------------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 100 00112235578999999988889999999999999999985 999998887
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..+....+.... ..+....++..+.+++.+||..+|.+||| +.+++.
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~~~ 260 (270)
T cd05056 214 NNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSKRPR----FTELKA 260 (270)
T ss_pred HHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 776665554432 33344557889999999999999999999 555543
No 358
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=319.69 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=223.1
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..|.+...+.....+||.|.||.||.+.+++....||||.++.+. -.+..|+.|..+|+.++|||+|+|+++|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----MeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc----hhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 445666667778899999999999999999999999999998654 3678999999999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|||+|||..|+|.+||+......++.-.+..++.||..||.||..+++|||||...|+|+..+..||++|||+++.+
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999999866667888888899999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
..+... ....---...|.|||.|....++.++|||+|||+|||+.| |-.||.+
T Consensus 416 tgDTYT--------------------------AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 416 TGDTYT--------------------------AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred cCCcee--------------------------cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 643211 1111123567999999999999999999999999999996 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.+..+.| .++...+.......|++.+..|++.||+++|..||+|++
T Consensus 470 idlSqVY-~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFae 515 (1157)
T KOG4278|consen 470 IDLSQVY-GLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAE 515 (1157)
T ss_pred ccHHHHH-HHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHH
Confidence 9887765 456666777777789999999999999999999999764
No 359
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-33 Score=314.94 Aligned_cols=255 Identities=22% Similarity=0.336 Sum_probs=205.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+...+|+.++.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 345689999999999999999999877775 56888876432 233344678899999999999999999988754
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..++|+||+++|+|.+++... ...+++..+..++.||+.||+|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 468999999999999998764 235889999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 160 EGDEKE-------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cCcccc-------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 311100 01112346778999999998889999999999999999996 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
...... ..++.....++....++..+.+++.+||..+|++||++.+.+.
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 215 IPTREI-PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred CCHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 665443 4444444445555567889999999999999999999544333
No 360
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.1e-33 Score=310.16 Aligned_cols=247 Identities=22% Similarity=0.304 Sum_probs=200.3
Q ss_pred cccccCCcEEEEEEEEcCCC------eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 675 KPLGSGDTGSVHLVELCGSG------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.||+|+||.||++.+.... ..+|+|.+.+.. .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986543 789999886542 2234567888999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-----cEEEEeccCC
Q 001869 749 DYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLS 818 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-----~vkL~DFG~a 818 (1002)
||+++++|.+++... ....++...+..++.||+.||.|||+++++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999999753 223478899999999999999999999999999999999999877 8999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~P 897 (1002)
....... .........++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 159 ~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 159 RDIYKSD-------------------------YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred ccccccc-------------------------ccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 5432110 0011122346788999999999899999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
|...+..+....+... ..+.....++..+.+||.+||..+|.+||+ +.+++
T Consensus 214 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~ 264 (269)
T cd05044 214 YPALNNQEVLQHVTAG-GRLQKPENCPDKIYQLMTNCWAQDPSERPT----FDRIQ 264 (269)
T ss_pred CcccCHHHHHHHHhcC-CccCCcccchHHHHHHHHHHcCCCcccCCC----HHHHH
Confidence 9887776665554433 223333456788999999999999999999 55554
No 361
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.7e-33 Score=307.22 Aligned_cols=247 Identities=21% Similarity=0.320 Sum_probs=192.3
Q ss_pred cccccCCcEEEEEEEEcC--CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCC
Q 001869 675 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
+.||+|+||.||+|.... ....+++|.+.... .......+.+|+.+++.++||||+++++++...+..|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 358999999999996533 34578888775432 23345667889999999999999999999999999999999999
Q ss_pred CCcHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 753 GGELFLLLDRQPT---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 753 ggsL~~~l~~~~~---~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
+++|.+++..... ...+...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999999976422 2356788899999999999999999999999999999999999999999998854211100
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-------CCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
........+++.|+|||++.. ..++.++|||||||++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 156 ----------------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ----------------------eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 001123356778999999743 356779999999999999998 88999887
Q ss_pred ChHHHHHHHHhC-CCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 902 TRQKTFANILHK-DLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 902 ~~~~~~~~i~~~-~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+.+...... ...++. ...++..+.+++..|+ .||.+||| +++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt----~~~v~ 264 (269)
T cd05042 214 SDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPT----AEEVH 264 (269)
T ss_pred CHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccC----HHHHH
Confidence 776666655443 222222 2346778889999998 59999999 55544
No 362
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.6e-33 Score=304.65 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=196.2
Q ss_pred cccccCCcEEEEEEEEcC---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCeEEEEEec
Q 001869 675 KPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVCLITDY 750 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lV~E~ 750 (1002)
+.||+|+||.||+|.+.. .+..+|+|.+... ........+.+|+.+++.++||||+++++++. .++..|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998743 3468999987542 23445677888999999999999999999765 45678999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+.+++|.+++.... ..++...+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||++.........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~--- 154 (262)
T cd05058 79 MKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY--- 154 (262)
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce---
Confidence 99999999997643 34677888889999999999999999999999999999999999999999998643211000
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 909 (1002)
.........+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....
T Consensus 155 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~ 214 (262)
T cd05058 155 --------------------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVY 214 (262)
T ss_pred --------------------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 0001122346778999999988889999999999999999999 5677877776666555
Q ss_pred HHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 910 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 910 i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+.... ..+.....+..+.+++.+||..+|++||+ +.++++
T Consensus 215 ~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~il~ 254 (262)
T cd05058 215 LLQGR-RLLQPEYCPDPLYEVMLSCWHPKPEMRPT----FSELVS 254 (262)
T ss_pred HhcCC-CCCCCCcCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 54432 22223346788999999999999999999 555543
No 363
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.5e-34 Score=343.71 Aligned_cols=269 Identities=29% Similarity=0.433 Sum_probs=209.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------- 740 (1002)
..+|+.+..||+||||.||+|+++-+|+.||||.+.... .......+.+|+.++.+|+|||||++|..+.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 468999999999999999999999999999999987654 56667889999999999999999999863100
Q ss_pred ----------------------------------------------------------C---------------------
Q 001869 741 ----------------------------------------------------------K--------------------- 741 (1002)
Q Consensus 741 ----------------------------------------------------------~--------------------- 741 (1002)
+
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred ---------------------------------CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001869 742 ---------------------------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 788 (1002)
Q Consensus 742 ---------------------------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH 788 (1002)
..+||-||||+..+|.+++.++.... .....+.++++|++||+|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHH
Confidence 13689999999999999998764321 47788999999999999999
Q ss_pred HcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC----CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcc
Q 001869 789 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC----KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 864 (1002)
Q Consensus 789 ~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y 864 (1002)
++|||||||||.||++++++.|||+|||+|+...- ......+.+ .....+.....+.+||..|
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~-------------~~~g~~~~~~Ts~VGTalY 781 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFST-------------NRAGSNDGDLTSQVGTALY 781 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccc-------------cccCCCCcccccccceeee
Confidence 99999999999999999999999999999965210 000000000 0011122245678999999
Q ss_pred cccccccCCC---CCChhhHHHHHHHHHHHHcCCCCCCC-CChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccC
Q 001869 865 IAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRD 938 (1002)
Q Consensus 865 ~aPE~l~~~~---~~~~sDIwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~d 938 (1002)
+|||++.+.. |+.|+|+||||++|+||+. ||.. ......+.++-.+.++.+.. .+.-+.-..+|+.||+.|
T Consensus 782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hd 858 (1351)
T KOG1035|consen 782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHD 858 (1351)
T ss_pred ecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCC
Confidence 9999997654 8999999999999999985 5643 33444445554555555511 112234578999999999
Q ss_pred cCCCCCChhcHHHHHcCCCcC
Q 001869 939 PKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 939 P~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
|++||| |.|||++.||-
T Consensus 859 P~kRPt----A~eLL~s~llp 875 (1351)
T KOG1035|consen 859 PSKRPT----ATELLNSELLP 875 (1351)
T ss_pred CccCCC----HHHHhhccCCC
Confidence 999999 99999999987
No 364
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.1e-33 Score=306.57 Aligned_cols=250 Identities=24% Similarity=0.352 Sum_probs=206.3
Q ss_pred CcccccccccCCcEEEEEEEEcC-CCeEEEEEEeecccc-------cChhHHHHHHHHHHHHHh-CCCCCcceEEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM-------LNRNKVHRACAEREILDM-LDHPFVPALYASFQT 740 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~~~-------~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~ 740 (1002)
.|++.+.||+|+||.||++.+.. +++.+|+|.+..... ........+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999977 688999998864321 122344567778888765 799999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
.+..|+||||++|++|.+++.. .....+++..++.++.|++.||.|||+ .||+|+||+|+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999998753 233568999999999999999999996 6899999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+....... ......|+..|+|||.+.+..++.++|+||||+++|+|++|..|
T Consensus 161 ~~~~~~~~----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 161 AKQKQPES----------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeeccccc----------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 85432110 11234688999999999988899999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
|...........+............++..+.++|.+||+.||++||++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 213 FYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred ccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 98877766666665554433233356889999999999999999999433
No 365
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.2e-34 Score=287.27 Aligned_cols=252 Identities=25% Similarity=0.414 Sum_probs=208.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC--Ce
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTK--TH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~--~~ 743 (1002)
..++|++++++|+|.|+.||.+.+..++..++||++++- ..+.+.+|+.||..|. ||||++++++..+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 357999999999999999999999999999999998753 5678899999999995 99999999999764 56
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-CcEEEEeccCCcccC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~~ 822 (1002)
..+|+||+++.+...+... ++.-.++.++.+|+.||.|||++||+|||+||.|++|+.. ..++|+|+|+|..+.
T Consensus 110 paLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 7899999999988887654 8889999999999999999999999999999999999954 579999999997653
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCC-CC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF-RG 900 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf-~~ 900 (1002)
+. ...+..+.+..|--||.+.. ..|+..-|+|||||+|..|++.+.|| .|
T Consensus 185 p~----------------------------~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 185 PG----------------------------KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred CC----------------------------ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 21 12234567888999999865 45788999999999999999988886 45
Q ss_pred CChHHHHHHHHhC-------------CCC----------------CC-----C-CCCCCHHHHHHHHHccccCcCCCCCC
Q 001869 901 KTRQKTFANILHK-------------DLK----------------FP-----S-STPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 901 ~~~~~~~~~i~~~-------------~~~----------------~~-----~-~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
.+..+++.+|..- .+. |. . ..-.++++.+||.++|.+|..+|+|
T Consensus 237 ~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT- 315 (338)
T KOG0668|consen 237 HDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT- 315 (338)
T ss_pred CCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc-
Confidence 5555555544320 011 10 1 1224689999999999999999999
Q ss_pred hhcHHHHHcCCCcCCC
Q 001869 946 HEGANEIKKHPFFKGV 961 (1002)
Q Consensus 946 ~~~a~elL~Hp~f~~~ 961 (1002)
|+|++.||||..+
T Consensus 316 ---akEam~HpyF~~~ 328 (338)
T KOG0668|consen 316 ---AKEAMAHPYFAPV 328 (338)
T ss_pred ---hHHHhcCchHHHH
Confidence 9999999999875
No 366
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.6e-33 Score=306.45 Aligned_cols=239 Identities=21% Similarity=0.299 Sum_probs=190.4
Q ss_pred cccccCCcEEEEEEEEcC------------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 675 KPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~------------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
+.||+|+||.||++.... ....+++|.+... .......+..|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 358999999999998532 2336888887643 2334456778899999999999999999999989
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc-------EEEEec
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------VSLTDF 815 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~-------vkL~DF 815 (1002)
..++||||+++++|..++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999999888654 345899999999999999999999999999999999999987664 899999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-CCCCCChhhHHHHHHHHHHHH-c
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEML-Y 893 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~~sDIwSlGvil~ell-t 893 (1002)
|++..... .....|+..|+|||++. +..++.++|||||||++|+|+ .
T Consensus 157 g~~~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (262)
T cd05077 157 GIPITVLS-------------------------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205 (262)
T ss_pred CCCccccC-------------------------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 98743210 11245788899999986 466888999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 894 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|..||......+.. .+...... ...+.+.++.+||.+||+.||.+||+ +.+|+++
T Consensus 206 ~~~p~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~----~~~il~~ 260 (262)
T cd05077 206 GEIPLKDKTLAEKE-RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPF----FRAIMRD 260 (262)
T ss_pred CCCCCCCcchhHHH-HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcC----HHHHHHh
Confidence 88998776544432 23333222 22234678999999999999999999 7777754
No 367
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4e-33 Score=305.91 Aligned_cols=247 Identities=22% Similarity=0.318 Sum_probs=192.3
Q ss_pred cccccCCcEEEEEEEEc--CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCC
Q 001869 675 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
+.||+|+||.||++... .++..+|+|.++... .......+.+|+.+++.++||||+++++++.+...+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 46899999999999864 356789999886542 22334567889999999999999999999999999999999999
Q ss_pred CCcHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 753 GGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 753 ggsL~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
+++|.+++.... ....+...+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--- 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY--- 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce---
Confidence 999999987532 22456778888999999999999999999999999999999999999999999854221100
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-------CCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-------GHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-------~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
........|++.|+|||++.+. .++.++|||||||++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 156 ----------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred ----------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 0112234678899999998642 34679999999999999996 99999877
Q ss_pred ChHHHHHHHHh-CCCCCCCC---CCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 902 TRQKTFANILH-KDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 902 ~~~~~~~~i~~-~~~~~~~~---~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...+....... .....+.. ...+..+.+++.+|+ .+|++||| +++|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt----~~~l~ 264 (269)
T cd05087 214 SDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPS----AEEVH 264 (269)
T ss_pred ChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCC----HHHHH
Confidence 66555443332 22222222 245678899999999 68999999 66664
No 368
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-35 Score=295.94 Aligned_cols=260 Identities=24% Similarity=0.364 Sum_probs=213.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCeE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
+..++.+-+..||.|+||+|++..++.+|+..|||.++... ......+++.|.+. ++.-++||||++|+....++..
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc 138 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC 138 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence 44567778889999999999999999999999999998753 34455677777765 4555899999999999999999
Q ss_pred EEEEecCCCCcHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 745 CLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~---~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
||.||+| ..+|..+.+. .....+++.-+-.+..-.+.||.||-.. +|||||+||+|||++..|.+||||||++-.
T Consensus 139 WiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 139 WICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred eeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHh
Confidence 9999999 7777666542 2235699999999999999999999765 899999999999999999999999999843
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
+.. +-....-.|-..|||||.+.. ..|+.+||+||||++|||+.||..||
T Consensus 218 Lv~----------------------------SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPy 269 (361)
T KOG1006|consen 218 LVD----------------------------SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPY 269 (361)
T ss_pred HHH----------------------------HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCc
Confidence 221 112233468889999999943 46888999999999999999999999
Q ss_pred CCCC-hHHHHHHHHhCCCCCCCC----CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 899 RGKT-RQKTFANILHKDLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 899 ~~~~-~~~~~~~i~~~~~~~~~~----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+-+ ..+++..++.++.+.... ...+..+..||.-||.+|-..||. ..+|+++||++-
T Consensus 270 r~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpk----y~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 270 RKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPK----YDDLKKFPFYRM 332 (361)
T ss_pred chHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcc----hhhhhcCchhhh
Confidence 8844 456777777776654322 347889999999999999999999 999999999986
No 369
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=319.81 Aligned_cols=253 Identities=26% Similarity=0.335 Sum_probs=197.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-eEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-HVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~~~l 746 (1002)
.+.|.--..||+|+||.||++.... +..||||.+....... ...|.+|+.++.+++|||+|++++||.+.+ ..+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 3678888899999999999999844 4899999877543211 445999999999999999999999999988 5999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---cccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
|+|||++|+|.+.+.......+++.....|+.+++.||+|||... ||||||||+|||+|.+...||+|||+|+....
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999999999998654327899999999999999999999964 99999999999999999999999999954321
Q ss_pred -CCCCCCCcchhhhhcccCCCCCccccccCcccccc-cCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 824 -KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF-VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 824 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.. ..... .||.+|+|||++..+..+.++||||||++|.||++|+.+....
T Consensus 230 ~~~----------------------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 230 GDT----------------------------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred ccc----------------------------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 10 00111 7999999999998888999999999999999999999887643
Q ss_pred C---h---HHHHHHHHhC-CCC-C--CCC--CCCC--H---HHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 902 T---R---QKTFANILHK-DLK-F--PSS--TPTS--L---HAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~---~---~~~~~~i~~~-~~~-~--~~~--~~~s--~---~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
. . .+-....+.. .+. + |.. ...+ . .+..+...|++.+|.+||++.+++..+
T Consensus 282 ~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 282 RPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred CCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 2 1 1111111211 110 0 110 1122 1 245788999999999999977765555
No 370
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-34 Score=329.02 Aligned_cols=260 Identities=28% Similarity=0.422 Sum_probs=224.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEE-----eC
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----TK 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~~ 741 (1002)
.+.|++...||.|.+|.||+++++.+++..|+|+...... .-..+..|.+|++.+ +|||++.++++|. .+
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 4679999999999999999999999999999999876532 224566788999888 6999999999986 35
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|||||||.||+.-|+++.-.+..+.++.+..|++.++.||.+||.+.++|||||-.|||++.+|.|||+|||++...
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 78999999999999999999877788999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
+ ......++.+|||.|||||++.. ..|+..+|+||||++..||.-|.+
T Consensus 174 d---------------------------sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P 226 (953)
T KOG0587|consen 174 D---------------------------STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP 226 (953)
T ss_pred e---------------------------cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence 3 22345677899999999999854 346679999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 897 PFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
|+.+..+...+-.|.+...+ +..+...+.++.+||..||.+|..+||+ ..++|+|||++.-.
T Consensus 227 Pl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~----~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 227 PLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPS----TEELLKHPFITEQP 289 (953)
T ss_pred CccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcc----hhhhccCCcccccc
Confidence 99998887777666655432 3334556788999999999999999999 99999999999533
No 371
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.5e-33 Score=308.26 Aligned_cols=256 Identities=23% Similarity=0.339 Sum_probs=205.6
Q ss_pred cCCcccccccccCCcEEEEEEEEc----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--C
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 741 (1002)
..+|++.+.||+|+||.||++... .++..+|+|.+...... .....+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 357899999999999999999864 34889999998765321 356788899999999999999999999877 6
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
...++||||+++++|.+++.... ..++...+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 68999999999999999997653 35899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
...... ........++..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus 160 ~~~~~~------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 215 (284)
T cd05038 160 PEDKDY------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSP 215 (284)
T ss_pred ccCCcc------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence 311100 00011123556799999998888999999999999999999999998653
Q ss_pred Ch--------------HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 902 TR--------------QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 902 ~~--------------~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
.. .......+......+....++..+.+|+.+||+.+|.+|||+.+.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 216 PAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred cchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 22 12223344444455555567788999999999999999999444333
No 372
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.9e-33 Score=307.16 Aligned_cols=238 Identities=19% Similarity=0.296 Sum_probs=189.5
Q ss_pred ccccCCcEEEEEEEEcCC------------------------CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc
Q 001869 676 PLGSGDTGSVHLVELCGS------------------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 731 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~------------------------~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI 731 (1002)
.||+|+||.||++....+ ...+++|.+... .......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 589999999999975321 246888887643 22334567788999999999999
Q ss_pred ceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---
Q 001869 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--- 808 (1002)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--- 808 (1002)
+++++++...+..|+||||+++++|..++... ...+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999988653 34689999999999999999999999999999999999998643
Q ss_pred ----cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHH
Q 001869 809 ----HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWA 883 (1002)
Q Consensus 809 ----~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwS 883 (1002)
.+||+|||++..... .....+++.|+|||.+.+ ..++.++||||
T Consensus 158 ~~~~~~kl~d~g~~~~~~~-------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS-------------------------------REERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred CccceeeecCCcccccccc-------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 489999998743210 011246788999999865 56788999999
Q ss_pred HHHHHHHHH-cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 884 LGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 884 lGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|||++|+|+ +|..||.+....+.. .........+. ..+..+.++|.+||+.+|.+||| +.+++++
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rps----~~~il~~ 272 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPE--PSCKELATLISQCLTYEPTQRPS----FRTILRD 272 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCCC--CCChHHHHHHHHHcccChhhCcC----HHHHHHh
Confidence 999999985 699999876655433 23333333332 34568999999999999999999 7777654
No 373
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.5e-33 Score=305.84 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=202.5
Q ss_pred cccccccccCCcEEEEEEEEc---CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001869 671 FRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
|++.+.||+|+||.||+|.+. .+++.+|||++.... ........+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 678899999999999999864 357899999987643 23445677889999999999999999999886432
Q ss_pred -eEEEEEecCCCCcHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 743 -HVCLITDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
..+++++|+.+++|.+++.... ...++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 3478999999999998875321 12478899999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~ 896 (1002)
+........ ........+++.|++||.+.+..++.++|||||||++|+|++ |.+
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~ 214 (273)
T cd05074 160 SKKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214 (273)
T ss_pred cccccCCcc-------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence 865321100 001112345678999999988889999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
||.+.+....+..+.... ........+..+.+++.+||+.+|.+||+ +.++++
T Consensus 215 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps----~~~~~~ 267 (273)
T cd05074 215 PYAGVENSEIYNYLIKGN-RLKQPPDCLEDVYELMCQCWSPEPKCRPS----FQHLRD 267 (273)
T ss_pred CCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 998887766666555433 22233456789999999999999999999 555543
No 374
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=300.09 Aligned_cols=266 Identities=25% Similarity=0.462 Sum_probs=219.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
..+|.-++.+|.|+- .|..+.|.-.++.+|+|.+... ..+....++..+|..++..+.|+||++++.+|...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 358999999999999 7888999899999999998877 44455567888999999999999999999999643
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||| ..+|...+.. .+....+..++.|+++|+.|||+.||+||||||+||++..++.+||+|||+|...
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 3689999999 8899888863 2788999999999999999999999999999999999999999999999999643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... -....++.|..|.|||++.+..+...+||||+||++.||++|...|.|.
T Consensus 169 ~~~----------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~ 220 (369)
T KOG0665|consen 169 DTD----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK 220 (369)
T ss_pred Ccc----------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence 211 1123467899999999999999999999999999999999999999998
Q ss_pred ChHHHHHHHHhCC---------------------------C----CCCCC---------CCCCHHHHHHHHHccccCcCC
Q 001869 902 TRQKTFANILHKD---------------------------L----KFPSS---------TPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~~~---------------------------~----~~~~~---------~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+..+.+.++...- . .+|+. ...+..+++|+.+||-.||++
T Consensus 221 d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~ 300 (369)
T KOG0665|consen 221 DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEK 300 (369)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhh
Confidence 7776666554310 0 11111 123446789999999999999
Q ss_pred CCCChhcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001869 942 RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
|.+ ++++|+||||+ -|-.-...+.|..
T Consensus 301 Ris----v~daL~HPY~~--vw~~~~ev~ap~p 327 (369)
T KOG0665|consen 301 RIS----VDDALRHPYIK--VWYDPDEVEAPPP 327 (369)
T ss_pred ccc----HHHHhcCCeee--eecccccccCCCC
Confidence 999 99999999999 3644444555543
No 375
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-34 Score=320.29 Aligned_cols=257 Identities=21% Similarity=0.285 Sum_probs=220.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++.+.||+|.||+|+++.+... ...||||+++...... ....|.+|+.+|.+|+|||+++||++..+ ..+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 34667788999999999999998543 3478999998765433 67899999999999999999999999988 678
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
.+|||++++|+|.+.|++.....|....+-.|+.||+.||.||..+++|||||...|+|+-....|||||||+.+.++..
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999999999877788999999999999999999999999999999999999999999999999999876533
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.... ......--...|+|||.|....++.++|+|+|||+||||++ |..||.|...
T Consensus 266 ed~Y------------------------vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g 321 (1039)
T KOG0199|consen 266 EDMY------------------------VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG 321 (1039)
T ss_pred Ccce------------------------EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH
Confidence 2211 11112234567999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
..++++|- ..-.++....|+.++.+++..||..+|.+||||....++.
T Consensus 322 ~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 322 IQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 99988887 5567777888999999999999999999999965543333
No 376
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=7.8e-33 Score=301.19 Aligned_cols=236 Identities=19% Similarity=0.260 Sum_probs=190.0
Q ss_pred cccccCCcEEEEEEEEcCCC----------eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 675 KPLGSGDTGSVHLVELCGSG----------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~----------~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
+.||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.+++.++||||+++++++.. +..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999998776 357788765432 115678889999999999999999999888 778
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-------cEEEEeccC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-------HVSLTDFDL 817 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-------~vkL~DFG~ 817 (1002)
++||||+.+++|.+++..... .++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999986532 589999999999999999999999999999999999999887 799999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC--CCCChhhHHHHHHHHHHHHc-C
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLY-G 894 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~~sDIwSlGvil~ellt-G 894 (1002)
+..... .....++..|+|||++.+. .++.++|||||||++|+|++ |
T Consensus 155 a~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 155 PITVLS-------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred cccccc-------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCC
Confidence 854321 1123467789999999876 78889999999999999998 6
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 895 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..||...+......... .....+. .....+.++|.+||..+|.+||| +.++++
T Consensus 204 ~~p~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 256 (259)
T cd05037 204 EEPLSTLSSSEKERFYQ-DQHRLPM--PDCAELANLINQCWTYDPTKRPS----FRAILR 256 (259)
T ss_pred CCCcccCCchhHHHHHh-cCCCCCC--CCchHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 88887765433333222 2211221 22368899999999999999999 666654
No 377
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.3e-32 Score=306.23 Aligned_cols=259 Identities=16% Similarity=0.174 Sum_probs=190.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHH--------HHHHHHHHHHHhCCCCCcceE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKV--------HRACAEREILDMLDHPFVPAL 734 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~--------~~~~~E~~il~~l~hpnIv~l 734 (1002)
+..++|++.+.||+|+||.||+|.+..+ +..+|+|+............ .....+...+..+.|++|+.+
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457899999999999999999999877 67788886443211100000 111223334556789999999
Q ss_pred EEEEEeCC----eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcE
Q 001869 735 YASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 810 (1002)
Q Consensus 735 ~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~v 810 (1002)
++++.... ..+++++++ ..++.+.+... ...++..+..++.||+.||+|||+++|+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 99776443 457889988 56777777653 336788899999999999999999999999999999999999999
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHH
Q 001869 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (1002)
Q Consensus 811 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~e 890 (1002)
+|+|||+|.......... ...........||+.|+|||++.+..++.++|||||||++|+
T Consensus 166 ~l~DFGla~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHI--------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred EEEEcCCceeeccCCccc--------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999996543211100 000111233579999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCh-HH--------HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 891 MLYGYTPFRGKTR-QK--------TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 891 lltG~~Pf~~~~~-~~--------~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|++|..||.+... .. .+..+....... ..++..+.+++..|+..+|.+||+ +.+|++
T Consensus 226 l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~----~~~l~~ 291 (294)
T PHA02882 226 WAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKI---KNANKFIYDFIECVTKLSYEEKPD----YDALIK 291 (294)
T ss_pred HHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhcc---CCCCHHHHHHHHHHHhCCCCCCCC----HHHHHH
Confidence 9999999987632 21 122222222222 235788999999999999999999 666653
No 378
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.1e-32 Score=300.27 Aligned_cols=248 Identities=18% Similarity=0.304 Sum_probs=192.7
Q ss_pred cccccCCcEEEEEEEEcCC--CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCC
Q 001869 675 KPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
+.||+|+||.||++..... ...+++|.+.... .......+.+|+.+++.++||||+++++.+......|+||||+.
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3589999999999975433 3456677665432 23345678899999999999999999999999999999999999
Q ss_pred CCcHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 753 GGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 753 ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+++|.+++.... ...++...++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999999997532 23467778889999999999999999999999999999999999999999998743211000
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-------CCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
.......+|++.|+|||++.. ..++.++|||||||++|+|++ |..||...+
T Consensus 155 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 213 (268)
T cd05086 155 ---------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS 213 (268)
T ss_pred ---------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Confidence 011124568899999999743 235678999999999999996 678998877
Q ss_pred hHHHHHHHHhCC-CCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 903 RQKTFANILHKD-LKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 903 ~~~~~~~i~~~~-~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
..+.+..+..+. ..++. ....+..+.+++..|| .+|++||+ +.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~----~~~i~~ 264 (268)
T cd05086 214 DREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRAT----AEEVHR 264 (268)
T ss_pred HHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCC----HHHHHH
Confidence 777776665442 22211 2346788899999999 68999999 666643
No 379
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=304.47 Aligned_cols=141 Identities=29% Similarity=0.444 Sum_probs=124.3
Q ss_pred hccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-----C---CCc
Q 001869 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----H---PFV 731 (1002)
Q Consensus 660 ~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-----h---pnI 731 (1002)
+..|+.++..+|.+.++||+|-|++||+|.|..+.+.||+|+++.. ..-......||.+|++++ | .+|
T Consensus 69 V~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~V 144 (590)
T KOG1290|consen 69 VRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCV 144 (590)
T ss_pred eeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 3456677779999999999999999999999999999999999754 233455677999999883 3 479
Q ss_pred ceEEEEEE----eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEc
Q 001869 732 PALYASFQ----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQ 805 (1002)
Q Consensus 732 v~l~~~~~----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~ 805 (1002)
|+|++.|. ++.++|+|+|+. |.+|..+++....+.++...++.|++|||.||.|||.. ||||.||||+|||+.
T Consensus 145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 99999996 466999999999 99999999988888899999999999999999999986 999999999999995
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-35 Score=292.54 Aligned_cols=264 Identities=25% Similarity=0.375 Sum_probs=211.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------ 740 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------ 740 (1002)
....|..+..||+|.||.||+|+.+.+|+.||+|++--.. ..........+|+.+|..|+|+|++.+++.+..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 4568999999999999999999999999999998653211 122233456789999999999999999887642
Q ss_pred --CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 741 --KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 741 --~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
...+|+||.+| ..+|..++... ...++...++.++.++..||.|+|...|+|||+||.|+||+.+|.+||+|||++
T Consensus 94 r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 94 RDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 34689999999 56888888653 356999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+.++.......+ .....+-|.+|++||.+.|. .|+++.|||..|||+.+|.++.+-
T Consensus 172 r~fs~~~n~~kp-----------------------rytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspi 228 (376)
T KOG0669|consen 172 RAFSTSKNVVKP-----------------------RYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPI 228 (376)
T ss_pred cceecccccCCC-----------------------CcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcc
Confidence 765433221111 12345779999999999875 578899999999999999999999
Q ss_pred CCCCChHHHHHHHHh--CCC---CCCC----------------------------CCCCCHHHHHHHHHccccCcCCCCC
Q 001869 898 FRGKTRQKTFANILH--KDL---KFPS----------------------------STPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~--~~~---~~~~----------------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
|.+.+....+..|.. +.+ -||. .-..++++.+|+.+||..||.+|++
T Consensus 229 mqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ 308 (376)
T KOG0669|consen 229 MQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRID 308 (376)
T ss_pred ccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcc
Confidence 999988877766543 111 1111 0112446789999999999999999
Q ss_pred ChhcHHHHHcCCCcCC
Q 001869 945 SHEGANEIKKHPFFKG 960 (1002)
Q Consensus 945 ~~~~a~elL~Hp~f~~ 960 (1002)
+.++|+|.||..
T Consensus 309 ----ad~alnh~~F~k 320 (376)
T KOG0669|consen 309 ----ADQALNHDFFWK 320 (376)
T ss_pred ----hHhhhchhhhhc
Confidence 999999999986
No 381
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=310.15 Aligned_cols=257 Identities=21% Similarity=0.325 Sum_probs=214.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCC----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
......+.+.||.|.||.||++....- .--||||..+.+. .......|..|..+|+.++||||+++++++.+.
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e~- 463 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ- 463 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-
Confidence 334455668899999999999986322 3468899887654 344578899999999999999999999999874
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|||||+++-|.|..|++.+. ..++...+..|+.||+.||+|||++++|||||...|||+.+..-|||+|||+++.+.
T Consensus 464 P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 5899999999999999999874 569999999999999999999999999999999999999999999999999998876
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
.+... ......-...|||||.+.-..++.++|||-|||.+||++. |.-||.+-
T Consensus 543 d~~yY--------------------------kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv 596 (974)
T KOG4257|consen 543 DDAYY--------------------------KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV 596 (974)
T ss_pred ccchh--------------------------hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc
Confidence 43221 1112234567999999999999999999999999999985 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh---cHHHHHc
Q 001869 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKK 954 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~---~a~elL~ 954 (1002)
...+.+-.+.++ -.+|.++.|++.+..|+.+||.+||.+||.+.+ .+.++++
T Consensus 597 kNsDVI~~iEnG-eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 597 KNSDVIGHIENG-ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred cccceEEEecCC-CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 777776655554 366777789999999999999999999999864 2444444
No 382
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=6.3e-34 Score=310.47 Aligned_cols=257 Identities=27% Similarity=0.409 Sum_probs=212.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC------CCcceEEEEEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~ 739 (1002)
+...+|.+....|+|-||+|..|.+...|..||||++....+ ..+.=+.|++||++|.. -|+++++..|.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 446899999999999999999999999999999999986532 23344679999999953 48999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-CcEEEEeccC
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDL 817 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~ 817 (1002)
..+++|||||-+ ..+|.++|++-+ ...|....++.|+.||..||..|-..||+|.||||+|||++.+ ..+||||||.
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence 999999999998 889999998632 3358889999999999999999999999999999999999965 5789999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
|-..+... -..+..+..|.|||++.|.+|++..|+||.||+||||+||+..
T Consensus 584 A~~~~ene-----------------------------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 584 ASFASENE-----------------------------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred cccccccc-----------------------------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeecccee
Confidence 85432111 1123456789999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCC----------------------------------------C-----------CCCC--
Q 001869 898 FRGKTRQKTFANILHKDLKFPS----------------------------------------S-----------TPTS-- 924 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~----------------------------------------~-----------~~~s-- 924 (1002)
|+|.+...++...+.-.-++|. + ..++
T Consensus 635 FpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~de 714 (752)
T KOG0670|consen 635 FPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDE 714 (752)
T ss_pred cCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCch
Confidence 9999988888766543222211 0 0011
Q ss_pred -----HHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 925 -----LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 925 -----~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..+++||.+||..||++|+| +.++|+||||++
T Consensus 715 q~~~~~~~rdLLdkml~LdP~KRit----~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 715 QPKIVQQLRDLLDKMLILDPEKRIT----VNQALKHPFITE 751 (752)
T ss_pred hHHHHHHHHHHHHHHhccChhhcCC----HHHHhcCCcccC
Confidence 14679999999999999999 999999999985
No 383
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=317.67 Aligned_cols=244 Identities=31% Similarity=0.450 Sum_probs=195.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------Ce
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------TH 743 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~~ 743 (1002)
.|..-+.||+|+||.||+++++.+|+.+|||.+++.. .........+|+++|++|+|+|||+++++-++. ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 4566688999999999999999999999999988754 455677888999999999999999999986543 35
Q ss_pred EEEEEecCCCCcHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc--CC--cEEEEeccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NG--HVSLTDFDLS 818 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~--~g--~vkL~DFG~a 818 (1002)
..+|||||.||+|..++..- ....|++..++.++..+..||.|||++||+||||||.||++-. +| .-||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 68999999999999999752 1235999999999999999999999999999999999999863 34 3699999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+..+.+ ....+++||+.|.+||.+.. ..|+.-+|.|||||++|+++||..|
T Consensus 172 rel~d~----------------------------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 172 RELDDN----------------------------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELP 223 (732)
T ss_pred ccCCCC----------------------------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence 775432 13357899999999999984 7888899999999999999999999
Q ss_pred CCCCCh----HHHHHHHHhCC---------------C----CCCCCCCCCHH----HHHHHHHccccCcCCCC
Q 001869 898 FRGKTR----QKTFANILHKD---------------L----KFPSSTPTSLH----AKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 898 f~~~~~----~~~~~~i~~~~---------------~----~~~~~~~~s~~----~~~Ll~~~L~~dP~~Rp 943 (1002)
|..... .+....+..++ + .+|.+..++.. +...|..+|..+|.+|.
T Consensus 224 F~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 224 FIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred CCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 954322 22333332211 1 12333233332 34678889999999998
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.2e-32 Score=327.56 Aligned_cols=262 Identities=17% Similarity=0.218 Sum_probs=181.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCC----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEE----
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS---- 737 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~---- 737 (1002)
+..++|++.+.||+|+||.||+|.+..+ +..||+|.+.... .......+ .++...+.++..+...
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 4567999999999999999999999888 8999999876421 11111111 1222222222222211
Q ss_pred --EEeCCeEEEEEecCCCCcHHHHHhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001869 738 --FQTKTHVCLITDYCPGGELFLLLDRQPTK------------------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (1002)
Q Consensus 738 --~~~~~~~~lV~E~~~ggsL~~~l~~~~~~------------------~l~~~~i~~i~~qil~aL~yLH~~gIiHrDL 797 (1002)
.......++||||+.+++|.+++...... ......+..++.||+.||+|||++||+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 24567899999999999999998753211 1123456789999999999999999999999
Q ss_pred CCCCEEEcc-CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC--
Q 001869 798 KPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-- 874 (1002)
Q Consensus 798 KP~NILl~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-- 874 (1002)
||+|||++. ++.+||+|||+|+...... .......+||+.|+|||.+....
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------------------~~~~~~~~~t~~Y~APE~~~~~~~~ 335 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------------------NYIPKEFLLDPRYAAPEQYIMSTQT 335 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccc--------------------------ccCCcccccCCCccChHHhhccCCC
Confidence 999999985 5899999999996432110 01123467899999999764322
Q ss_pred --------------------CCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHh-CCCCC----------------
Q 001869 875 --------------------HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH-KDLKF---------------- 917 (1002)
Q Consensus 875 --------------------~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~-~~~~~---------------- 917 (1002)
++.++|||||||+||+|+++..|+.. ....+...+. ....+
T Consensus 336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 413 (566)
T PLN03225 336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLR 413 (566)
T ss_pred CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhh
Confidence 23356999999999999997766532 2222222211 11100
Q ss_pred ---CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 918 ---PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 918 ---~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
......+..+++||.+||+.||.+||| +.++|+||||++..+..+
T Consensus 414 ~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t----a~e~L~Hpff~~~~~~~~ 461 (566)
T PLN03225 414 RGFEVLDLDGGAGWELLKSMMRFKGRQRIS----AKAALAHPYFDREGLLGL 461 (566)
T ss_pred hhhhhccccchHHHHHHHHHccCCcccCCC----HHHHhCCcCcCCCCcccc
Confidence 000112234568999999999999999 999999999999877644
No 385
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-33 Score=305.02 Aligned_cols=255 Identities=22% Similarity=0.330 Sum_probs=211.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..+...++++||+|.||.|.+|.-. .+..||+|.++... .......|..|+++|.+|+||||+.+++++..++.++
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEec-CceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 44567888999999999999999873 36899999998764 4555688999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+|+|||++|+|..++..+....+.......++.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++-+...+
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999999999987643334555666799999999999999999999999999999999999999999997432111
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHH--cCCCCCCCCCh
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML--YGYTPFRGKTR 903 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ell--tG~~Pf~~~~~ 903 (1002)
-.+..+..+-...|||+|.+..++++.++|+|+||+++||++ |..-||...+.
T Consensus 692 -------------------------yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~ 746 (807)
T KOG1094|consen 692 -------------------------YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD 746 (807)
T ss_pred -------------------------ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH
Confidence 112334556778999999999999999999999999999987 58889988777
Q ss_pred HHHHHHHHh---CC---CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 904 QKTFANILH---KD---LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 904 ~~~~~~i~~---~~---~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
.+...+.-. .. .-++.+.-++..+.+||..||.+|-.+||+ .+++
T Consensus 747 e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPs----Fe~l 797 (807)
T KOG1094|consen 747 EQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPS----FEQL 797 (807)
T ss_pred HHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCC----HHHH
Confidence 766655432 11 112334557888999999999999999999 6666
No 386
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-34 Score=289.35 Aligned_cols=261 Identities=28% Similarity=0.442 Sum_probs=212.3
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 744 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~ 744 (1002)
+.+--+.||.|+||+||.+.|..+|+.||+|.+.. .+......+++.+|+.+|..++|.|++..++..+..+ .+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 44555789999999999999999999999998754 3445667788999999999999999999999876543 57
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|+|+| ..+|..++-. ...++.+.++-+++||+.||+|||+.||.||||||.|+|+++|..+||||||+++....+
T Consensus 133 YV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 8999999 6677776643 356999999999999999999999999999999999999999999999999999764422
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
... .....+-|-+|+|||.++|. .|+.+.||||.|||+.||+..+..|...++
T Consensus 210 ~~~--------------------------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 210 DRL--------------------------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred hhh--------------------------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 111 11234678899999999986 477899999999999999999999988888
Q ss_pred HHHHHHHHh-----------------------CCCCCCCC---------CCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 904 QKTFANILH-----------------------KDLKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 904 ~~~~~~i~~-----------------------~~~~~~~~---------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+.+..|.. +..+.|+. .....+...++.+||..||++|.+ ..+
T Consensus 264 iqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris----~~~ 339 (449)
T KOG0664|consen 264 IEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS----VEE 339 (449)
T ss_pred HHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc----Hhh
Confidence 777665532 22222221 112336778999999999999999 999
Q ss_pred HHcCCCcCCCChh
Q 001869 952 IKKHPFFKGVNWA 964 (1002)
Q Consensus 952 lL~Hp~f~~~~~~ 964 (1002)
++.|+|+...-+.
T Consensus 340 A~~~~~~~e~R~r 352 (449)
T KOG0664|consen 340 ALQHRYLEEGRLR 352 (449)
T ss_pred hccccccccccee
Confidence 9999999875554
No 387
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=317.84 Aligned_cols=264 Identities=24% Similarity=0.338 Sum_probs=226.1
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCC---eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+|.....++.++||.|.||.||.++.+..| ..||||.++..- .......|+.|..||-+++||||++|.++....
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS 702 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC
Confidence 466677889999999999999999997666 478999998653 455677899999999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..++||+|||++|+|..+|+.+.+ .++..++.-+++.|+.||+||-+.|.|||||...|||++.+-.+|++|||+++.+
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvl 781 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 781 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeec
Confidence 999999999999999999988754 4888899999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHH-cCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ell-tG~~Pf~~ 900 (1002)
..++...+.+. .---...|.|||.+...+++.++||||+|++|||.+ +|..||.+
T Consensus 782 edd~~~~ytt~------------------------GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd 837 (996)
T KOG0196|consen 782 EDDPEAAYTTL------------------------GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 837 (996)
T ss_pred ccCCCcccccc------------------------CCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence 54432111110 011246799999999999999999999999999988 59999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc---HHHHHcCC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG---ANEIKKHP 956 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~---a~elL~Hp 956 (1002)
.+.++.+..|.+ .+.+|.+..|+..+.+|+..||++|-..||.|.+. +..++..|
T Consensus 838 mSNQdVIkaIe~-gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 838 MSNQDVIKAIEQ-GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred cchHHHHHHHHh-ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 999998876654 57888888899999999999999999999997643 34444444
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=3.1e-31 Score=309.92 Aligned_cols=266 Identities=18% Similarity=0.205 Sum_probs=191.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc----------------CCCeEEEEEEeecccccChh-----------HHHHHH
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC----------------GSGQYFAMKAMDKGVMLNRN-----------KVHRAC 717 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~----------------~~~~~vaiK~~~~~~~~~~~-----------~~~~~~ 717 (1002)
.+..++|++.++||+|+||.||++.+. ..++.||||.+......... ..+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 355789999999999999999999752 34568999998643211000 112233
Q ss_pred HHHHHHHhCCCCCc-----ceEEEEEEe--------CCeEEEEEecCCCCcHHHHHhhCCC-------------------
Q 001869 718 AEREILDMLDHPFV-----PALYASFQT--------KTHVCLITDYCPGGELFLLLDRQPT------------------- 765 (1002)
Q Consensus 718 ~E~~il~~l~hpnI-----v~l~~~~~~--------~~~~~lV~E~~~ggsL~~~l~~~~~------------------- 765 (1002)
.|+.++.+++|.++ +.++++|.. .+..|+||||+.+++|.+++.....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 46667777766543 666666642 3568999999999999999864211
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCC
Q 001869 766 ---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 842 (1002)
Q Consensus 766 ---~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 842 (1002)
..++...++.++.|++.+|.|||+++|+||||||+|||++.++.+||+|||++........
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---------------- 364 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---------------- 364 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----------------
Confidence 1245677889999999999999999999999999999999999999999999854321100
Q ss_pred CCCccccccCcccccccCCCcccccccccCCCC----------------------CChhhHHHHHHHHHHHHcCCC-CCC
Q 001869 843 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH----------------------TSAVDWWALGILLYEMLYGYT-PFR 899 (1002)
Q Consensus 843 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~----------------------~~~sDIwSlGvil~elltG~~-Pf~ 899 (1002)
.......+|+.|+|||.+..... ..+.||||+||++|+|++|.. ||.
T Consensus 365 ----------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 365 ----------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ----------cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 00111245899999999854321 124699999999999999886 765
Q ss_pred CCCh-----------HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCc---CCCCCChhcHHHHHcCCCcCC
Q 001869 900 GKTR-----------QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDP---KSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 900 ~~~~-----------~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP---~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+... ......+....+.++.....+..+++|+.+||..+| .+|+| ++|+|+||||..
T Consensus 435 ~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlS----a~eaL~Hp~f~~ 505 (507)
T PLN03224 435 NIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLS----VGQALSHRFFLP 505 (507)
T ss_pred chhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCC----HHHHhCCCCcCC
Confidence 4211 111122233445566566678899999999999876 68999 999999999964
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=5e-31 Score=282.51 Aligned_cols=242 Identities=43% Similarity=0.719 Sum_probs=203.9
Q ss_pred CcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcHHHHH
Q 001869 681 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 760 (1002)
Q Consensus 681 ~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 760 (1002)
+||.||+|.+..+++.+|+|++........ ...+.+|+.++++++|+||+++++++......+++|||+.+++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999998899999999876533221 578889999999999999999999999999999999999999999998
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 001869 761 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (1002)
Q Consensus 761 ~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (1002)
..... ++...+..++.+++.+|.|||+.+|+|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------------- 141 (244)
T smart00220 79 KKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------------- 141 (244)
T ss_pred HhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---------------
Confidence 76432 8999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CChHHHHHHHHhCCCCCCC
Q 001869 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKFPS 919 (1002)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~ 919 (1002)
......+++.|++||.+.+..++.++||||||+++|+|++|..||.. .+.......+.........
T Consensus 142 -------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 208 (244)
T smart00220 142 -------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP 208 (244)
T ss_pred -------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc
Confidence 12234688899999999888888999999999999999999999987 4444444444333333322
Q ss_pred CCC-CCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 920 STP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 920 ~~~-~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
... ++..+.+++.+||..+|++||+ +.++++||||
T Consensus 209 ~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~~~~~~~ 244 (244)
T smart00220 209 PEWKISPEAKDLIRKLLVKDPEKRLT----AEEALQHPFF 244 (244)
T ss_pred ccccCCHHHHHHHHHHccCCchhccC----HHHHhhCCCC
Confidence 222 7788999999999999999999 9999999997
No 390
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=2.3e-31 Score=287.50 Aligned_cols=281 Identities=25% Similarity=0.352 Sum_probs=206.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcC---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+.|+++.+||+|.|++||++.+.. ..++||+|.+... +...++.+|+++|..+ .+.||+.+.+++..++.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 3689999999999999999999977 7899999988754 2456789999999998 69999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEEeccCCcccC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~ 822 (1002)
+++||||++.....+++.. ++...++.|++.++.||.++|.+|||||||||+|+|++. .+.-.|+|||+|....
T Consensus 110 v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred eEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHH
Confidence 9999999999999998855 788999999999999999999999999999999999985 5788999999996311
Q ss_pred CCCCC----------CCC-cchhh-hhcccCCCCCcc-c----cccCcccccccCCCcccccccccCC-CCCChhhHHHH
Q 001869 823 CKPQL----------LLP-TTNEK-KRRHKGQQNPVF-M----AEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWAL 884 (1002)
Q Consensus 823 ~~~~~----------~~~-~~~~~-~~~~~~~~~~~~-~----~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSl 884 (1002)
..... ..+ ..... .....+...|.. . ...........||++|.|||++... ..++++||||.
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 10000 000 00000 000000000000 0 1111223456899999999999775 46789999999
Q ss_pred HHHHHHHHcCCCCCCCCC-hHHHHHHHH--------------hCC---------------------C------C--C---
Q 001869 885 GILLYEMLYGYTPFRGKT-RQKTFANIL--------------HKD---------------------L------K--F--- 917 (1002)
Q Consensus 885 Gvil~elltG~~Pf~~~~-~~~~~~~i~--------------~~~---------------------~------~--~--- 917 (1002)
|+|+..++++..||.... ....+..+. .+. + + .
T Consensus 265 GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~ 344 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNT 344 (418)
T ss_pred cceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccce
Confidence 999999999999985321 111111100 001 0 0 0
Q ss_pred ---CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 918 ---PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 918 ---~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
......+..+.+|+.+||..||.+|+| |+++|+||||...+
T Consensus 345 ~~~~~~d~~~~~~~dlLdk~le~np~kRit----AEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 345 EREIGSDVFPALLLDLLDKCLELNPQKRIT----AEDALKHPFFDEAD 388 (418)
T ss_pred eeccccccccHHHHHHHHHHccCChhhccc----HHHHhcCcCCcchh
Confidence 001123447889999999999999999 99999999999643
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-31 Score=257.88 Aligned_cols=224 Identities=26% Similarity=0.403 Sum_probs=184.1
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh-CCCCCcceEEEEEEe
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM-LDHPFVPALYASFQT 740 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~ 740 (1002)
.+-.+.-+....+..||+|++|.|-+.++..+|...|+|.+.... +....+++++|+.+..+ ..+|++|.+|+.+..
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r 116 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR 116 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc
Confidence 334455567777889999999999999999999999999987642 34455677788887554 489999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 741 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
...++|.||.| ..+|..+.++ ..++.+++..+-+++..++.||.|||++ .|||||+||+|||++.+|+||+||||.
T Consensus 117 egdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 117 EGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999999 7788766553 3457799999999999999999999987 899999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC----CCCCChhhHHHHHHHHHHHHc
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~~~~sDIwSlGvil~ellt 893 (1002)
+-.+..+ -....-.|--.|||||.+.. ..|+.++||||||+++.||.+
T Consensus 196 sG~L~dS----------------------------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~ 247 (282)
T KOG0984|consen 196 SGYLVDS----------------------------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI 247 (282)
T ss_pred ceeehhh----------------------------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence 8554321 11112357778999999843 478889999999999999999
Q ss_pred CCCCCCC-CChHHHHHHHHhCCCC
Q 001869 894 GYTPFRG-KTRQKTFANILHKDLK 916 (1002)
Q Consensus 894 G~~Pf~~-~~~~~~~~~i~~~~~~ 916 (1002)
++.||.. .++.+++.+++....+
T Consensus 248 lr~PY~~w~tpF~qLkqvVeep~P 271 (282)
T KOG0984|consen 248 LRFPYESWGTPFQQLKQVVEEPSP 271 (282)
T ss_pred ccccccccCCHHHHHHHHhcCCCC
Confidence 9999965 6778888888876543
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=306.71 Aligned_cols=251 Identities=28% Similarity=0.412 Sum_probs=199.9
Q ss_pred cccccccccCCcEE-EEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 001869 671 FRPIKPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 671 y~i~~~LG~G~~g~-Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
|.-.+.+|.|+.|+ ||++.. .|+.||||.+-.. ......+|+..|+.- .||||+++|..-.+....||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44556789999976 699987 7889999987543 345667899999888 6999999999999999999999
Q ss_pred ecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---CC--cEEEEeccCCccc
Q 001869 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NG--HVSLTDFDLSCLT 821 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g--~vkL~DFG~a~~~ 821 (1002)
|+| ..+|.+++... ..........+.++.|+++||++||+.+||||||||.||||+. ++ .++|+|||+++.+
T Consensus 583 ELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999 88999999863 1111122345778899999999999999999999999999986 33 6899999999876
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
..+... .....+..||-+|+|||++.......++|||||||++|+.++ |..||..
T Consensus 662 ~~~~sS------------------------~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 662 AGGKSS------------------------FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred CCCcch------------------------hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence 543222 122456689999999999999888889999999999999998 5899965
Q ss_pred CChHHHHHHHHhCCCCCCCCCCC-CHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~-s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
... .-.+|+.+...+-..... ..++.+||.+||+.+|..||+ |.++|.||||=.
T Consensus 718 ~~~--R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPs----a~~VL~HPlFW~ 772 (903)
T KOG1027|consen 718 SLE--RQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPS----ATDVLNHPLFWD 772 (903)
T ss_pred hHH--hhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCC----HHHHhCCCccCC
Confidence 433 334677766544322211 128999999999999999999 999999999954
No 393
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=7.1e-32 Score=302.98 Aligned_cols=292 Identities=25% Similarity=0.389 Sum_probs=241.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|.++..+|.|+||.||+++++.+++..|+|+++.. ......-+.+|+-+++..+||||+.+++.|...+..++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 36899999999999999999999999999999999854 344556677899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||.||+|.+.... .+.+++.++...++..+.||+|||+.|-+|||||-.|||+++.|.+||.|||.+..+.
T Consensus 91 MEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit----- 163 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT----- 163 (829)
T ss_pred EEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh-----
Confidence 999999999998754 4679999999999999999999999999999999999999999999999999985432
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc---cCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.....+.++.|||+|||||+- ....|...+|||++|++..|+-.-++|-....+.
T Consensus 164 ----------------------ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm 221 (829)
T KOG0576|consen 164 ----------------------ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM 221 (829)
T ss_pred ----------------------hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH
Confidence 122345578999999999996 4567888999999999999999888887777776
Q ss_pred HHHHHHHhCCCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC-----ChhhhhccCCCCCCC
Q 001869 905 KTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV-----NWALVRCMNPPELDA 976 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~-----~~~~~~~~~~~~~~~ 976 (1002)
..+..+-...++.| +....+..+-+|++.+|.++|.+||+ ++.+|+|||.... .-+.+...+-|..++
T Consensus 222 r~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpt----aeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v 297 (829)
T KOG0576|consen 222 RALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPT----AEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVV 297 (829)
T ss_pred HHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCC----hhhheeceeeccchhhHHHHHHHHHccCCCCcc
Confidence 66665555544433 34556778899999999999999999 9999999999874 223446666665555
Q ss_pred CCCCCccccccccCChhhH
Q 001869 977 PLFATDTEKEYKVVDPGMQ 995 (1002)
Q Consensus 977 p~~~~~~~~~~~~~~~~~~ 995 (1002)
..+-.+...+|..+...|.
T Consensus 298 ~~~~d~~~E~~~~i~~~i~ 316 (829)
T KOG0576|consen 298 RYLEDYDGEDYLWIPMRIC 316 (829)
T ss_pred cccccCCcccccchhhhhh
Confidence 5555555555555444443
No 394
>PRK13560 hypothetical protein; Provisional
Probab=99.97 E-value=1.5e-29 Score=320.91 Aligned_cols=411 Identities=12% Similarity=0.074 Sum_probs=301.1
Q ss_pred ccccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCCh
Q 001869 168 VRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDP 247 (1002)
Q Consensus 168 ~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~ 247 (1002)
.....|||++++++++|+++++.|+.++++++++++++|. +|+|+++|+++++++||+.+|++|+++..+.++....
T Consensus 183 ~g~~~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~ 259 (807)
T PRK13560 183 DGFAEDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE---DAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPAD 259 (807)
T ss_pred EEEEEccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC---CCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhH
Confidence 3455899999999999999999999999999999999998 8889999999999999999999999998887766555
Q ss_pred HHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEe--eeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhHH
Q 001869 248 EDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI--APIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLI 325 (1002)
Q Consensus 248 ~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~--~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~l~ 325 (1002)
.........+..+.....+.+++++||..+|+.+.+ .|+.|.+|.+.+++++++|||++|++|++|+.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se-------- 331 (807)
T PRK13560 260 DYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVGAITDISGRRAAERELLEKE-------- 331 (807)
T ss_pred HHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEEEEEechHHHHHHHHHHHHH--------
Confidence 444455556667777788889999999999776654 5667899999999999999999999999987421
Q ss_pred HHHHHHHHHhHHHHHHHHHHcc-CCCCcccCCCCCcc-cccCCCCchhhhcccccCCCCCCCCCCCCCC------CCC--
Q 001869 326 RYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPI-IRKSEGGVEEERAGALGRRKSENVPPPRRNS------YGG-- 395 (1002)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~-- 395 (1002)
.....++.+.. +.........+... +...+..+|++.+++.|+......|...... ..+
T Consensus 332 -----------~~l~~l~~~~~~~i~~~d~~g~i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (807)
T PRK13560 332 -----------DMLRAIIEAAPIAAIGLDADGNICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPD 400 (807)
T ss_pred -----------HHHHHHHHhCcccEEEEcCCCCEEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCc
Confidence 12223333333 22333444445544 4556678999999999998766554321110 000
Q ss_pred -Cc-----------ccccccccccchhhccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHH
Q 001869 396 -GC-----------RTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKV 463 (1002)
Q Consensus 396 -~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1002)
.. ..........+.....+.|...|+...+.+..+.++...... ....|+|+|++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~-------------~~~~DITerk~ 467 (807)
T PRK13560 401 GRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAI-------------ALLVDITERKQ 467 (807)
T ss_pred CCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEE-------------EEeehhhhHHH
Confidence 00 001111222233344556666777776666666555433222 33678999999
Q ss_pred HHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHh
Q 001869 464 RQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAID 541 (1002)
Q Consensus 464 ~~~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~--~~~l~~~~~~~~~~~~l~~~l~ 541 (1002)
.++++++ .+.++++++++++.++.. ++..+.+|.....++||+++++++.. +..+.+|++.......+...+.
T Consensus 468 ~E~~L~~---~~~~~e~~~~~i~~~~~~--~~~~~~~~~~~~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~~~ 542 (807)
T PRK13560 468 VEEQLLL---ANLIVENSPLVLFRWKAE--EGWPVELVSKNITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEFAA 542 (807)
T ss_pred HHHHHHH---HHHHHhcCCceEEEEecC--CCceEEEecchhhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHHHh
Confidence 9999987 678999999999988865 23355566666788999999998633 5567788887777666766666
Q ss_pred cC-CcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccCCchhhhHHHHHHHHHHhhhhhhhh
Q 001869 542 NQ-TDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAV 620 (1002)
Q Consensus 542 ~~-~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~~~~~~~v~~~~ 620 (1002)
.+ ..+..++++.++||..+|+.....|++|.+|.+.+++|+++|||++|++|++++ ....+...++..+.|.+++-+
T Consensus 543 ~g~~~~~~e~r~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~aE~~L~--~a~~~~~~~l~~isHelrnpL 620 (807)
T PRK13560 543 QGVDRFEQEYRILGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHAEEKIK--AALTEKEVLLKEIHHRVKNNL 620 (807)
T ss_pred cCCccceeEEEEEcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHHHHHHH--HHHHHHHHHHHHhHHHHhChH
Confidence 55 457889999999999999999999999999999999999999999999876543 234445555555555555444
No 395
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-30 Score=294.94 Aligned_cols=253 Identities=23% Similarity=0.302 Sum_probs=213.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
..+..++||+|+||+||++.+...|+ +||+|++... ...+....+..|+-+|.+|+|||++++++++.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 45667889999999999999866654 6788887654 34455678899999999999999999999998766 89
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
||++||++|+|.++++.. ...+.......|+.||++||.|||.++++||||-..|||+.+-.++|+.|||+++....+.
T Consensus 774 lvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999999999875 4568889999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
... ......-.+.|||-|.+....|+.++|||||||++||++| |.-||.+....
T Consensus 853 ~ey-------------------------~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~ 907 (1177)
T KOG1025|consen 853 KEY-------------------------SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE 907 (1177)
T ss_pred ccc-------------------------cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence 211 0111223567999999999999999999999999999996 99999998766
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
++ .++++..-.++.++.++.++..++.+||..|+..||++++.+++.
T Consensus 908 eI-~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 908 EI-PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred Hh-hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 54 566666666888889999999999999999999999987655443
No 396
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-29 Score=301.25 Aligned_cols=264 Identities=25% Similarity=0.346 Sum_probs=216.4
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcC-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceE
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 734 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l 734 (1002)
.+.+..+...+.+.||+|.||.|+++.... ....||||.++.... ......+..|+++|+.+ .|+||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 344555666777899999999999997531 145789999886543 36778899999999999 59999999
Q ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHhhCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCC
Q 001869 735 YASFQTKTHVCLITDYCPGGELFLLLDRQP------------T--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 800 (1002)
Q Consensus 735 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~--~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~ 800 (1002)
++++...+.+++|+||+..|+|..+++... . ..++...+..++.||+.|++||++.++|||||...
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999998754 0 23889999999999999999999999999999999
Q ss_pred CEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCccccccc--CCCcccccccccCCCCCCh
Q 001869 801 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFV--GTEEYIAPEIIAGAGHTSA 878 (1002)
Q Consensus 801 NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Gt~~y~aPE~l~~~~~~~~ 878 (1002)
|||++.+..+||+|||+|+....+... ....-. -...|||||.+....|+.+
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y--------------------------~~~~~~~~LP~kWmApEsl~~~~ft~k 501 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYY--------------------------RTKSSAGTLPVKWMAPESLFDRVFTSK 501 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCce--------------------------EecCCCCccceeecCHHHhccCccccc
Confidence 999999999999999999753321110 000011 2345999999999999999
Q ss_pred hhHHHHHHHHHHHHc-CCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 879 VDWWALGILLYEMLY-GYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 879 sDIwSlGvil~ellt-G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+||||||++|||+++ |..||.+.. ..+. ...++.......+..++.++.++++.||+.+|++||+|.+..+.+-.|
T Consensus 502 SDVWSfGI~L~EifsLG~~PYp~~~~~~~l-~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 502 SDVWSFGILLWEIFTLGGTPYPGIPPTEEL-LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred chhhHHHHHHHHHhhCCCCCCCCCCcHHHH-HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 999999999999997 999999865 4444 446666666666777899999999999999999999988766655554
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=4.5e-30 Score=283.99 Aligned_cols=202 Identities=31% Similarity=0.499 Sum_probs=176.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhH-----HHHHHHHHHHHHhCC---CCCcceEEEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----VHRACAEREILDMLD---HPFVPALYASFQ 739 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~-----~~~~~~E~~il~~l~---hpnIv~l~~~~~ 739 (1002)
..+|..++.||.|+||.|++|.++++...|+||.+.+.......- ...+-.||.||..|+ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 457999999999999999999999999999999988764322211 122346999999996 999999999999
Q ss_pred eCCeEEEEEecC-CCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 740 TKTHVCLITDYC-PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 740 ~~~~~~lV~E~~-~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+++++||+||-. +|.+|++++... ..+++...+.|++|++.|+++||+.||||||||-+|+.++.+|-+||+|||.|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 999999999997 578999999876 44999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~P 897 (1002)
.... +...+.++||..|.|||++.|.+| +..-|||+||++||-+++...|
T Consensus 718 a~~k-----------------------------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp 768 (772)
T KOG1152|consen 718 AYTK-----------------------------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP 768 (772)
T ss_pred hhhc-----------------------------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence 6532 234467899999999999998876 4578999999999999999999
Q ss_pred CCC
Q 001869 898 FRG 900 (1002)
Q Consensus 898 f~~ 900 (1002)
|+.
T Consensus 769 yyn 771 (772)
T KOG1152|consen 769 YYN 771 (772)
T ss_pred CcC
Confidence 864
No 398
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-28 Score=267.13 Aligned_cols=243 Identities=23% Similarity=0.356 Sum_probs=184.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCcceEEEEEEeC----C
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTK----T 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~----~ 742 (1002)
.+..+.+.||+|.||.||++.+ -|..||||++... +.....+|.+|+.. |+|+||+.+++.-..+ .
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 4677889999999999999999 5678999998743 23456678888764 5999999998865432 3
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CcccCCCCCCCEEEccCCcEEEEe
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--------gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
.+|||++|.+.|||+|||.+. .++.+....++.-++.||++||-. .|.|||||..|||+..+|.+-|+|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 689999999999999999873 489999999999999999999964 499999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC------CChhhHHHHHHHH
Q 001869 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILL 888 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~------~~~sDIwSlGvil 888 (1002)
+|+|.......... .-..+..+||-.|||||+|..... ...+||||||.++
T Consensus 360 LGLAv~h~~~t~~i-----------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl 416 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTI-----------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL 416 (513)
T ss_pred ceeeEEecccCCcc-----------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence 99996654331110 112245689999999999965321 2379999999999
Q ss_pred HHHHc----------CCCCCCCC----ChHHHHHHHHh---CCCCCCCCCCCCH---HHHHHHHHccccCcCCCCCC
Q 001869 889 YEMLY----------GYTPFRGK----TRQKTFANILH---KDLKFPSSTPTSL---HAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 889 ~ellt----------G~~Pf~~~----~~~~~~~~i~~---~~~~~~~~~~~s~---~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
||++. -++||.+- ...+.+.+++- -.+..|..-.-.+ .+-.+++.||..||..|.|+
T Consensus 417 WEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 417 WEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred HHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 99983 24688652 22334444432 2223333222223 34578999999999999994
No 399
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=7.4e-29 Score=320.20 Aligned_cols=238 Identities=20% Similarity=0.306 Sum_probs=183.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|...+.||+|+||.||+|.+..++..||+|.+..... ....|+.++++++|||||++++++.+.+..|+||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 356777889999999999999989999999998864321 1124578899999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH---CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
|||++|+|.++++. +++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 763 Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~--- 833 (968)
T PLN00113 763 EYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC--- 833 (968)
T ss_pred eCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc---
Confidence 99999999999953 788999999999999999999 6699999999999999988887775 66542210
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh--
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR-- 903 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~-- 903 (1002)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 834 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~ 885 (968)
T PLN00113 834 ----------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH 885 (968)
T ss_pred ----------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCC
Confidence 01123688999999999999999999999999999999999999853211
Q ss_pred --HHHHHHHHhCC--------CCCCCC----CCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 904 --QKTFANILHKD--------LKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 904 --~~~~~~i~~~~--------~~~~~~----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
........... ...... .....++.+++.+||+.||.+|||+.++++
T Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 886 GSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred CcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 11111110000 000000 111235678999999999999999544433
No 400
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9.7e-29 Score=269.29 Aligned_cols=244 Identities=23% Similarity=0.366 Sum_probs=190.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCcceEEEEEEeCC--
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT-- 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~-- 742 (1002)
+....+++..||+|.||.||+|.. +++.||||++.. .....+.+|.+|.+. +.|+||++++.+-....
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 356788889999999999999998 568999999864 356788889999876 47999999998876555
Q ss_pred --eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------CcccCCCCCCCEEEccCCcEE
Q 001869 743 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~---------gIiHrDLKP~NILl~~~g~vk 811 (1002)
.++||++|.+.|+|.+||+.+ .++.....+++.-++.||+|||+. .|+|||||..||||..|+++.
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 789999999999999999874 489999999999999999999963 599999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC------CChhhHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALG 885 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~------~~~sDIwSlG 885 (1002)
|+|||+|..+.+. .+.......+||..|||||+|.+..- -.+.||||+|
T Consensus 357 IaDFGLAl~~~p~-------------------------~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 357 IADFGLALRLEPG-------------------------KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG 411 (534)
T ss_pred eeccceeEEecCC-------------------------CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence 9999999765421 12233345799999999999966421 1278999999
Q ss_pred HHHHHHHcCCC------------CCC-----CCChHHHHHHHHh--CCCCCCCCC---CCCHHHHHHHHHccccCcCCCC
Q 001869 886 ILLYEMLYGYT------------PFR-----GKTRQKTFANILH--KDLKFPSST---PTSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 886 vil~elltG~~------------Pf~-----~~~~~~~~~~i~~--~~~~~~~~~---~~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
.+||||++... ||. ..+..++....++ .+..+|+.- ..-..+.+.+..||..||+.|+
T Consensus 412 LVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARL 491 (534)
T KOG3653|consen 412 LVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARL 491 (534)
T ss_pred HHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhh
Confidence 99999996332 222 1122233333333 234444321 1223578999999999999999
Q ss_pred CCh
Q 001869 944 GSH 946 (1002)
Q Consensus 944 t~~ 946 (1002)
|+.
T Consensus 492 TA~ 494 (534)
T KOG3653|consen 492 TAG 494 (534)
T ss_pred hhH
Confidence 964
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=3.1e-26 Score=239.00 Aligned_cols=213 Identities=39% Similarity=0.646 Sum_probs=184.9
Q ss_pred cccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcH
Q 001869 677 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 756 (1002)
Q Consensus 677 LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL 756 (1002)
||.|++|.||++.+..+++.+++|++....... ....+.+|+.+++.+.|++|+++++++......+++|||+.|++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987653211 356788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEEeccCCcccCCCCCCCCCcchhh
Q 001869 757 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEK 835 (1002)
Q Consensus 757 ~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~ 835 (1002)
.+++.... ..++...++.++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------- 148 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------
Confidence 99987642 35899999999999999999999999999999999999999 89999999999865331110
Q ss_pred hhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001869 836 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 914 (1002)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 914 (1002)
......+...|++||.+... .++.+.|+|+||+++++|
T Consensus 149 ------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------- 187 (215)
T cd00180 149 ------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------- 187 (215)
T ss_pred ------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------
Confidence 11234578889999999877 778899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 915 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 915 ~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
..+.+++.+||+.||.+||+ +.++++|+
T Consensus 188 ----------~~~~~~l~~~l~~~p~~R~~----~~~l~~~~ 215 (215)
T cd00180 188 ----------PELKDLIRKMLQKDPEKRPS----AKEILEHL 215 (215)
T ss_pred ----------HHHHHHHHHHhhCCcccCcC----HHHHhhCC
Confidence 46889999999999999999 89999875
No 402
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.95 E-value=1.5e-27 Score=312.50 Aligned_cols=382 Identities=14% Similarity=0.131 Sum_probs=277.3
Q ss_pred ccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHH
Q 001869 176 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (1002)
Q Consensus 176 ~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~ 255 (1002)
..+..++.++++++.++.++++++++|+++|. +|+|+++|+++++++||+.+|++|+++..+.++++.......+..
T Consensus 270 ~~r~~~~~l~~~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~ 346 (1092)
T PRK09776 270 AFRAERKHISESETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 346 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHH
Confidence 34445567888999999999999999999998 888999999999999999999999998888887776665555655
Q ss_pred HHHcC-CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 001869 256 TLQNG-QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEM 334 (1002)
Q Consensus 256 ~l~~g-~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~l~~~~~~~~~~ 334 (1002)
.+.++ ..+..+.+..++||+.+|+..+.++++|.+|.+.+++++++|||++|++|++++...
T Consensus 347 ~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~----------------- 409 (1092)
T PRK09776 347 LLSGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLM----------------- 409 (1092)
T ss_pred HHcCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHH-----------------
Confidence 55544 346788899999999999999999999999999999999999999999999877311
Q ss_pred hHHHHHHHHHHcc-CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCC---cccccccccccchh
Q 001869 335 ATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG---CRTSMQRISEVPEK 410 (1002)
Q Consensus 335 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 410 (1002)
+....+.++.. +.+..........++......+|++.++..+...-..+-++........ ...........+.+
T Consensus 410 --~~~~~~~~~~~~~i~~~d~~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r 487 (1092)
T PRK09776 410 --ERITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDRQRVEKEIRDALQGRSPFKLEFR 487 (1092)
T ss_pred --HHHHHHHHhcCceEEEEecCCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 11122222222 2244444555666777666677777666333111000000000000000 00001122334555
Q ss_pred hccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhc-ccHHHHHHhccccEEEEc
Q 001869 411 KKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITD 489 (1002)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~i~e~~~~~I~i~D 489 (1002)
...++| ..|+...+.+..+.++...... ....|+|+|++.++++++. ..++.++++++++|+++|
T Consensus 488 ~~~~dG-~~w~~~~~~~~~d~~G~~~~~i-------------g~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~~D 553 (1092)
T PRK09776 488 IVVKDG-VRHIRALANRVLNKDGEVERLL-------------GINMDMTEVRQLNEALFQEKERLHITLDSIGEAVVCTD 553 (1092)
T ss_pred EEcCCc-eEEEEEeeEEEECCCCCEEEEE-------------eeeeehhHHHHHHHHHHHHHHHHHHHHhccccEEEEEC
Confidence 667778 7787777766666555433222 3467899999999999766 679999999999999999
Q ss_pred CCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCC--CCHHHHHHHHHHHhcCCc--EEEEEEEEecCCCEEEEEEE
Q 001869 490 PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE--TDPATVRKIRAAIDNQTD--VTVQLINYTKSGNKFWNLFH 565 (1002)
Q Consensus 490 ~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~--~~~~~~~~l~~~l~~~~~--~~~e~~~~~kdG~~~wv~~~ 565 (1002)
.+|. |+++|+++++++||+.+|++|++...+.+.. ........+......... +..+....+++|..+|+..+
T Consensus 554 ~~g~---i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 630 (1092)
T PRK09776 554 MAMK---VTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHYS 630 (1092)
T ss_pred CCCe---EEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEEE
Confidence 9777 9999999999999999999999966554422 122222334455444443 56677889999999999999
Q ss_pred EEeeeCCCCCEEEEEEEEecCCccccccccC
Q 001869 566 LQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 566 ~~pi~d~~G~v~~~vgi~~DITerk~~e~~~ 596 (1002)
..|+++.+|++.+++++++|||++|+.++++
T Consensus 631 ~~pi~~~~g~~~g~v~~~~DITe~k~~e~~L 661 (1092)
T PRK09776 631 ITPLSTLDGENIGSVLVIQDVTESRKMLRQL 661 (1092)
T ss_pred eeeeecCCCCEEEEEEEEEecchHHHHHHHH
Confidence 9999999999999999999999999876544
No 403
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95 E-value=6.1e-27 Score=248.56 Aligned_cols=253 Identities=18% Similarity=0.172 Sum_probs=208.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCC-----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE-
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ- 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~- 739 (1002)
+...++++...+-+|.||.||.+.+.+.. +.+.+|.++.. ...-++..+..|..++..+.|||+..+.++..
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 44567888999999999999999775443 34556666543 24556778889999999999999999999875
Q ss_pred eCCeEEEEEecCCCCcHHHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEE
Q 001869 740 TKTHVCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 813 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~------~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~ 813 (1002)
+....++++.++.-|+|..++.. .....++..++..++.|++.|++|||++||||.||...|++|++.-.+||+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence 55678999999999999999982 122357778888899999999999999999999999999999999999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc
Q 001869 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt 893 (1002)
|=.+++..-+.+..+.. ++..-...||+||.+.+..|+.++|+||||++||||++
T Consensus 439 DsaLSRDLFP~DYhcLG-------------------------DnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmt 493 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHCLG-------------------------DNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMT 493 (563)
T ss_pred cchhccccCcccccccC-------------------------CCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHh
Confidence 99999765433332211 22234567999999999999999999999999999997
Q ss_pred -CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 894 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 894 -G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
|+.||...++.++.. ++..+..+..+.+|++++..++..||..+|++||++.
T Consensus 494 lg~~PyaeIDPfEm~~-ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~ 546 (563)
T KOG1024|consen 494 LGKLPYAEIDPFEMEH-YLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFS 546 (563)
T ss_pred cCCCCccccCHHHHHH-HHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHH
Confidence 999999999988754 5556667777788999999999999999999999943
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-27 Score=241.81 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=193.9
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEE-EEeCCeEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS-FQTKTHVCL 746 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~-~~~~~~~~l 746 (1002)
+.|.+.+.||+|.||.+.+|+++.++..+++|.+.+.. .....|.+|...--.| .|.||+.-|++ |+..+.+++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 68999999999999999999999999999999998753 3456777777654444 58999988875 677888999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc--CCcEEEEeccCCcccCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~--~g~vkL~DFG~a~~~~~~ 824 (1002)
++||++-|+|..-+... .+.+...+.++.|+++|+.|||++++||||||.+||||-. ..+|||||||.++..+..
T Consensus 100 ~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred eeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 99999999999887653 3889999999999999999999999999999999999953 358999999998553210
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-----CCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
-...--+..|.+||.+... ...+.+|||.||+++|.+++|++||+
T Consensus 177 ------------------------------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 177 ------------------------------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred ------------------------------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence 0012245678999886432 34568999999999999999999997
Q ss_pred CC----ChHHHHHHHHhC-CCCCCCC-CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 900 GK----TRQKTFANILHK-DLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 900 ~~----~~~~~~~~i~~~-~~~~~~~-~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
.. .+.-.+.+++.+ .+..|.. ...++.+..+.++-|..+|+.|....+ ++...+..|..
T Consensus 227 ka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~-~kk~rk~~w~E 291 (378)
T KOG1345|consen 227 KASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT-AKKMRKCLWKE 291 (378)
T ss_pred hhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHH-HHHHHHHHHHH
Confidence 42 222334444443 3344433 457888999999999999999943211 44454555544
No 405
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.1e-25 Score=238.87 Aligned_cols=215 Identities=37% Similarity=0.603 Sum_probs=180.4
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..++.++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 56788999999999999999888999999998865322 2567888899999999999999999999999999999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCC
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 830 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~ 830 (1002)
+.+++|.+++..... .++...+..++.+++.+|.+||+++++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~----- 152 (225)
T smart00221 79 CEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL----- 152 (225)
T ss_pred cCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----
Confidence 999999999976432 17899999999999999999999999999999999999999999999999886543110
Q ss_pred cchhhhhcccCCCCCccccccCcccccccCCCcccccccc-cCCCCCChhhHHHHHHHHHHHHcCCCCCCC-CChH-HHH
Q 001869 831 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQ-KTF 907 (1002)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~~~~sDIwSlGvil~elltG~~Pf~~-~~~~-~~~ 907 (1002)
........++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .+.. ...
T Consensus 153 ---------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~ 211 (225)
T smart00221 153 ---------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLS 211 (225)
T ss_pred ---------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHH
Confidence 0011234678899999998 667777899999999999999999999977 4554 455
Q ss_pred HHHHhCC
Q 001869 908 ANILHKD 914 (1002)
Q Consensus 908 ~~i~~~~ 914 (1002)
..+..+.
T Consensus 212 ~~~~~~~ 218 (225)
T smart00221 212 DVWSFGV 218 (225)
T ss_pred HHHhcCC
Confidence 5555443
No 406
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.8e-27 Score=268.17 Aligned_cols=275 Identities=41% Similarity=0.693 Sum_probs=229.3
Q ss_pred ccccCCcEEEEEEEE---cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEecC
Q 001869 676 PLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
.+|.|+||.|+++.- ...+..||+|++++......... ....|..++...+ ||++++++..|+.....|++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998864 34578899999988765544443 5567888888886 999999999999999999999999
Q ss_pred CCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCc
Q 001869 752 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 831 (1002)
Q Consensus 752 ~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~ 831 (1002)
.||.|+..+... ..+.+...+.+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++.....
T Consensus 80 rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~------- 150 (612)
T KOG0603|consen 80 RGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE------- 150 (612)
T ss_pred ccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhh-------
Confidence 999999888764 45888999999999999999999999999999999999999999999999998653210
Q ss_pred chhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHH
Q 001869 832 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 911 (1002)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~ 911 (1002)
...|||..|||||++. .+..++|.||||+++++|++|..||.+ +....|+
T Consensus 151 ------------------------~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il 200 (612)
T KOG0603|consen 151 ------------------------KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL 200 (612)
T ss_pred ------------------------hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence 1128999999999998 667899999999999999999999988 6777888
Q ss_pred hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCccccccccC
Q 001869 912 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVV 990 (1002)
Q Consensus 912 ~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 990 (1002)
...+..|.. .+..+++++..++..+|.+|.... +++.++++|+||..++|..+....++...-|-..+ ++++...
T Consensus 201 ~~~~~~p~~--l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~--e~~~~~f 276 (612)
T KOG0603|consen 201 KAELEMPRE--LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSIT--ERDVAQF 276 (612)
T ss_pred hhccCCchh--hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccc--hhhhhhc
Confidence 876666654 688999999999999999999875 68999999999999999988777777555454333 3444444
Q ss_pred Chhh
Q 001869 991 DPGM 994 (1002)
Q Consensus 991 ~~~~ 994 (1002)
++++
T Consensus 277 d~ef 280 (612)
T KOG0603|consen 277 DPEF 280 (612)
T ss_pred Cchh
Confidence 4433
No 407
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=3e-26 Score=288.34 Aligned_cols=228 Identities=19% Similarity=0.262 Sum_probs=155.7
Q ss_pred hCCC-CCcceEEEEEE-------eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCC
Q 001869 725 MLDH-PFVPALYASFQ-------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRD 796 (1002)
Q Consensus 725 ~l~h-pnIv~l~~~~~-------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrD 796 (1002)
.+.| +||+.++++|. ....++++|||+ +++|.+++... ...++...++.++.||+.||+|||++||+|||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD 105 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN 105 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 3445 57777888772 234678899988 77999999653 35599999999999999999999999999999
Q ss_pred CCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcc-hhhhhcccCCCC------Ccccccc-CcccccccCCCcccccc
Q 001869 797 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT-NEKKRRHKGQQN------PVFMAEP-MRASNSFVGTEEYIAPE 868 (1002)
Q Consensus 797 LKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~-~~~~~~~~Gt~~y~aPE 868 (1002)
|||+||||+..|.+|++|||++.............. ....+....... ......+ .......+||+.|||||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 999999998877888888877654322111000000 000000000000 0000000 01122357999999999
Q ss_pred cccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 869 IIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 869 ~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
++.+..++.++|||||||+||||++|.+||.... ..+..+.....+ +......+...+++.+||+.||.+||+
T Consensus 186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~~P~~Rps---- 258 (793)
T PLN00181 186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLP-PQILLNWPKEASFCLWLLHPEPSCRPS---- 258 (793)
T ss_pred hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcC-hhhhhcCHHHHHHHHHhCCCChhhCcC----
Confidence 9999999999999999999999999998875422 122222222111 111123456778999999999999999
Q ss_pred HHHHHcCCCcCCC
Q 001869 949 ANEIKKHPFFKGV 961 (1002)
Q Consensus 949 a~elL~Hp~f~~~ 961 (1002)
+.++++||||...
T Consensus 259 ~~eil~h~~~~~~ 271 (793)
T PLN00181 259 MSELLQSEFINEP 271 (793)
T ss_pred hHHHhhchhhhhh
Confidence 9999999999863
No 408
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.93 E-value=3.2e-25 Score=261.21 Aligned_cols=360 Identities=13% Similarity=0.028 Sum_probs=229.5
Q ss_pred HHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCC-cEEEEEEEEecC
Q 001869 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKKD 273 (1002)
Q Consensus 195 le~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~~~~~kd 273 (1002)
+++++|+++++|. +|+|++||.+++.++||+.+|++|+++..+++++........+...+..+. .+..+.+..+++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 78 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPS 78 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCC
Confidence 5788999999999 788999999999999999999999999988887765555566666666654 455666666677
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhHHHHHHHHHHHhHHHHHHHHHHccC-CCCc
Q 001869 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKK-PRSL 352 (1002)
Q Consensus 274 G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 352 (1002)
|..+|+.++..++.+ + .+++++.+|||++++.+.+|...+.. ++.+........+....++..... ..-.
T Consensus 79 g~~~~~~~~~~~~~~--~--~~~~~i~rDi~~~~~~~~~l~~~~~~-----~e~~~~~l~~~e~r~~~l~e~~~~~i~~~ 149 (442)
T TIGR02040 79 SFELPMRFILVRLGA--D--RGVLALGRDLRAVAELQQQLVAAQQA-----MERDYWTLREMETRYRVVLEVSSDAVLLV 149 (442)
T ss_pred CCccCeEEEEEEeCC--C--CeEEEEecccHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 777788777777644 2 25678999999988776554211000 000000111122334444555442 2333
Q ss_pred cc-CCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCc---ccccccccccchhhccccCCccccccccccc
Q 001869 353 SE-STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGC---RTSMQRISEVPEKKKQKSGRRSFMGLIGRKS 428 (1002)
Q Consensus 353 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (1002)
.. ...+...|......+|++.+++.|++..+.+++.......... ..... ........ ...+..+++. +...
T Consensus 150 d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~-~~~~~~~~~~--~~~~ 225 (442)
T TIGR02040 150 DMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGS-AAPVRILL-RRSQKRLLVV--VSVF 225 (442)
T ss_pred ECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCC-CcceEEEE-cCCCeEEEEE--EEEE
Confidence 33 4567778999999999999999999988887542211000000 00000 00000000 1111111111 1111
Q ss_pred ccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHc
Q 001869 429 QSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT 508 (1002)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~ 508 (1002)
.. ++..... ....++++++..+++++ ..|+.++++++++|+++|.+|. |+++|++|++++
T Consensus 226 ~~-~~~~~~l--------------~~~~dit~~~~~e~~~~--~~~~~l~e~~~d~I~v~D~~G~---I~~~N~a~~~l~ 285 (442)
T TIGR02040 226 RQ-DGESLFL--------------CQLSPAGATQPVGDELS--ENLARLYHEAPDAIVFSDADGT---IRGANEAFLELT 285 (442)
T ss_pred Ee-CCceEEE--------------EEEcccchhhhhhHHHH--HHHHHHHHhCCceEEEEcCCCc---EEehhHHHHHHh
Confidence 11 1110000 12345666666555543 2489999999999999999777 999999999999
Q ss_pred CCC-hhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 509 EYS-REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 509 Gys-~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
||+ .++++|++...+.++.... ....+......+.....+..+.+++|+.+|++++..|+.+.++ ..++++++|||
T Consensus 286 G~~~~~~l~G~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDIT 362 (442)
T TIGR02040 286 DSSSLEAVRGRTLDRWLGRGGVD-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDIS 362 (442)
T ss_pred CCCChHHHcCCCHHHHhCCCccc-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecch
Confidence 997 5789999976555533221 2222233334444455677788999999999999999986554 46789999999
Q ss_pred cccccc
Q 001869 588 EHLEPL 593 (1002)
Q Consensus 588 erk~~e 593 (1002)
+||+.+
T Consensus 363 eR~~~~ 368 (442)
T TIGR02040 363 RRLTMR 368 (442)
T ss_pred hhccCC
Confidence 999874
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=9.6e-25 Score=218.83 Aligned_cols=274 Identities=20% Similarity=0.258 Sum_probs=218.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 743 (1002)
-+..+.|+++++||+|+||.+|++....+|..||||+-+... ...++.-|..+.+.|. ...|+.+..++.+.++
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 355689999999999999999999999999999999876542 2235667889999996 5889999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC---CcEEEEeccCCcc
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCL 820 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~ 820 (1002)
-.+||++. |.+|.+++.-. ...++...+..++-|++.-++|+|.+++|||||||+|+|+.-+ ..+.|+|||+|+.
T Consensus 86 nvlVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred ceeeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence 99999999 99999999854 3459999999999999999999999999999999999999743 4689999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
+.+.... .+-+.+......||..|.+-..+.+...+.+.|+-|+|.+|.++.-|.+||++
T Consensus 164 y~d~~t~--------------------~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 164 YRDIRTR--------------------QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred hcccccc--------------------ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 5422110 12334555678899999999999988889999999999999999999999998
Q ss_pred C---ChHHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHH-------HcCCCcCCCChhhh
Q 001869 901 K---TRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI-------KKHPFFKGVNWALV 966 (1002)
Q Consensus 901 ~---~~~~~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el-------L~Hp~f~~~~~~~~ 966 (1002)
. +..+.+.+|...++..+. ....+.++.-.|..|=..--++-|...- +.++ |+|.+=--.||..+
T Consensus 224 lka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~y-lrqlFriLfr~ln~~~d~iyDW~~l 301 (341)
T KOG1163|consen 224 LKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMY-LRQLFRILFRTLNHQYDYIYDWTML 301 (341)
T ss_pred cchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHH-HHHHHHHHHhhccccCCeEeeHHHH
Confidence 4 445667788877766553 2456778888888886666666666421 2333 34444444788877
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=5.6e-24 Score=222.43 Aligned_cols=222 Identities=23% Similarity=0.334 Sum_probs=188.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+..-+|++.++||+|+||+++++.+.-++.+||||.-.. +...-++..|....+.| ..+.|+.+|.+..++-+
T Consensus 24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-----kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~ 98 (449)
T KOG1165|consen 24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-----KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKY 98 (449)
T ss_pred eEecccceeccccccCcceeeecccccccCceEEEEeccc-----cCCcchHHHHHHHHHHHcCCCCCCceeeeccccch
Confidence 3556789999999999999999999999999999996543 23445677788888888 57999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-----CcEEEEeccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 818 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-----g~vkL~DFG~a 818 (1002)
-.+|+|+. |.+|.|++.-. +..|+...+..++.|++.-++|+|++.+|.|||||+|+||... ..|.|+|||+|
T Consensus 99 NiLVidLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 99 NILVIDLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhhhhhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 99999999 99999999866 3569999999999999999999999999999999999999743 35899999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
+.+.+.... .+-+.+...+..||..||+-..+.+...+.+.|+-|||-++++++-|.+||
T Consensus 177 K~YrDp~Tk--------------------qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPW 236 (449)
T KOG1165|consen 177 KEYRDPKTK--------------------QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 236 (449)
T ss_pred hhhcCcccc--------------------ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcc
Confidence 876433211 123456667889999999999999999999999999999999999999999
Q ss_pred CC---CChHHHHHHHHhC
Q 001869 899 RG---KTRQKTFANILHK 913 (1002)
Q Consensus 899 ~~---~~~~~~~~~i~~~ 913 (1002)
.| .+..+.+++|-..
T Consensus 237 QGLKA~tnK~kYeKIGe~ 254 (449)
T KOG1165|consen 237 QGLKADTNKEKYEKIGET 254 (449)
T ss_pred ccccCcchHHHHHHhccc
Confidence 87 4556667776543
No 411
>PRK13560 hypothetical protein; Provisional
Probab=99.91 E-value=5.1e-24 Score=270.30 Aligned_cols=382 Identities=10% Similarity=0.040 Sum_probs=266.1
Q ss_pred ccccccccccchHHHH-HHHHHhcCCcEEEEeCCCCCCcE--EEcchHHHHHcCCChhHHcCCC--CCcCCCCCCChHHH
Q 001869 176 DEGGKEKGLPRVSDIV-KDALSTFQQTFVVSDATKPDYPI--MYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDV 250 (1002)
Q Consensus 176 ~~~~~e~~L~~~~~~l-~~ile~~~d~i~v~D~~~~dG~I--~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~ 250 (1002)
.++.++.+++++++.+ +.+++++|+++++.+. +.+|.+ .+++.+...++||...++++.. +..++||++.....
T Consensus 54 ~r~~~~~~l~~~~e~~~r~l~~~~p~~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~d~~~~~ 132 (807)
T PRK13560 54 ARAIAEAEAQDCREQCERNLKANIPGGMFLFAL-DGDGTFSFPSLLDANGELAAIAKHDLMADKGLLAMLIGGDDGDFFF 132 (807)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEE-cCccccccceeeccchhHHHhcCcccCCccchhhhhcCCCcchhhh
Confidence 4566778888888888 9999999999999886 223443 3478888888888888876543 33566666654433
Q ss_pred -------HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchh
Q 001869 251 -------AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPES 323 (1002)
Q Consensus 251 -------~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~ 323 (1002)
+.+..++..+.....+++++++||+ |+.....|.++.+|.+ .+.|+++|||++|++|++|+.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~e~r~~~~dg~--~~~~~~~~~~~~~g~~-~~~g~~~DIT~rk~ae~~l~~~------- 202 (807)
T PRK13560 133 ANPFRSAETIAMALQSDDWQEEEGHFRCGDGR--FIDCCLRFERHAHADD-QVDGFAEDITERKRAEERIDEA------- 202 (807)
T ss_pred hChhhHHHHHHHHhccCcccceEEEEEeCCcc--EEEEEeeeeecCCCce-EEEEEEEccchHHHHHHHHHHH-------
Confidence 2333344455556778899999996 6677788899888876 6899999999999999987732
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHcc-CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCC--Ccccc
Q 001869 324 LIRYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGG--GCRTS 400 (1002)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~ 400 (1002)
.+....++.... ..........+.+.|+.....+|++.++++|++..++.|......... .....
T Consensus 203 ------------~~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~ 270 (807)
T PRK13560 203 ------------LHFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFD 270 (807)
T ss_pred ------------HHHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhc
Confidence 122333444444 224445667788999999999999999999999999877633221100 00000
Q ss_pred cccccccchhhccccCCcccccccc--cccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhc-ccHHHH
Q 001869 401 MQRISEVPEKKKQKSGRRSFMGLIG--RKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATT 477 (1002)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~~i 477 (1002)
......++.....++|...|+.+.. ....+..+.... ......||++|++.++++++. ..|+.+
T Consensus 271 ~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g-------------~~~~~~DITerk~~e~~L~~se~~l~~l 337 (807)
T PRK13560 271 ADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAG-------------LVGAITDISGRRAAERELLEKEDMLRAI 337 (807)
T ss_pred cCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEE-------------EEEEEEechHHHHHHHHHHHHHHHHHHH
Confidence 1112223444556777766544332 222222222111 112457999999999999866 669999
Q ss_pred HHhccccEEEEcCCCCCCCEEec-CHHHHHHcCCChhhhcCCCCccccCCCCCHHH-----------------HHHHHHH
Q 001869 478 LERIEKNFVITDPRLPDNPIIFA-SDSFLELTEYSREEILGRNCRFLQGPETDPAT-----------------VRKIRAA 539 (1002)
Q Consensus 478 ~e~~~~~I~i~D~~G~d~~I~~v-N~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~-----------------~~~l~~~ 539 (1002)
+++++++|+++|.+|. ++++ |+++++++||+.+|++|++...+.+....... ...+...
T Consensus 338 ~~~~~~~i~~~d~~g~---i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (807)
T PRK13560 338 IEAAPIAAIGLDADGN---ICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAKT 414 (807)
T ss_pred HHhCcccEEEEcCCCC---EEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHHH
Confidence 9999999999999777 9987 67888899999999999986544332211110 0112333
Q ss_pred HhcCCcE-EEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccC
Q 001869 540 IDNQTDV-TVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 540 l~~~~~~-~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~ 596 (1002)
+..+..+ ..+++..+++|..+|+.....|++|.+|++++++++++|||++|+.|+++
T Consensus 415 ~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~~~DITerk~~E~~L 472 (807)
T PRK13560 415 IKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIALLVDITERKQVEEQL 472 (807)
T ss_pred HhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEEeehhhhHHHHHHHH
Confidence 5555554 35778889999999999999999999999999999999999999875533
No 412
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=3.1e-24 Score=219.69 Aligned_cols=161 Identities=25% Similarity=0.262 Sum_probs=128.7
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcch
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 833 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 833 (1002)
|+|.+++... ...+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 6899999764 345999999999999999999999998 999999999999999 998854321
Q ss_pred hhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHh
Q 001869 834 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFANILH 912 (1002)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~ 912 (1002)
....||+.|||||++.+..++.++|||||||++|+|++|+.||...... ..+..+..
T Consensus 62 ----------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 119 (176)
T smart00750 62 ----------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119 (176)
T ss_pred ----------------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH
Confidence 0125899999999999999999999999999999999999999765442 33333333
Q ss_pred CCCCC-C----CCCCCCH--HHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 913 KDLKF-P----SSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 913 ~~~~~-~----~~~~~s~--~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
..... + .....+. .+++||.+||..||.+||+ +.++++|+|+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~----~~~ll~~~~~~ 169 (176)
T smart00750 120 GMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA----ANHYLAHCRAL 169 (176)
T ss_pred HhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC----HHHHHHHHHHH
Confidence 22211 0 1111222 5899999999999999999 99999999875
No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.91 E-value=1.9e-24 Score=255.39 Aligned_cols=264 Identities=36% Similarity=0.606 Sum_probs=196.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.+|..++.|..|+||.||+++|+.+.+.+|+|+ .+..+ +.+ .|+.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l--------ilR--nilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL--------ILR--NILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccch--------hhh--ccccccCCccee----------------
Confidence 578999999999999999999999999999964 32211 000 144444555555
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+-...++.. +.++.+. +.+++|||+-||+|||+||+|.+|+.-|++|+.|||+++...-.....
T Consensus 136 -----gDc~tllk~~--g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -----GDCATLLKNI--GPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -----chhhhhcccC--CCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 4444444432 3355433 779999999999999999999999999999999999986532111110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
. ......+ . .. .-....+||||.|+|||++....|+..+|+|++|+|+|+++.|+.||.+++..+.+.
T Consensus 201 l-~eg~I~k-~--------t~--Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg 268 (1205)
T KOG0606|consen 201 L-KEGHIEK-D--------TH--EFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 268 (1205)
T ss_pred h-hhcchHH-H--------HH--HhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh
Confidence 0 0000000 0 00 011235699999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCC-CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCcccccc
Q 001869 909 NILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 987 (1002)
Q Consensus 909 ~i~~~~~~~~~~-~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 987 (1002)
..+...+.||+. ..+.++++++|.++|+.+|..|..-. .+-++.+|+||+.+||+-|-....+ .+|++....+-.|
T Consensus 269 ~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~-ga~evk~h~ff~~LDw~~llRqkae--fvpql~~eddtsy 345 (1205)
T KOG0606|consen 269 QVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG-GALEVKQHGFFQLLDWKSLLRQKAE--FVPQLESEDDTSY 345 (1205)
T ss_pred hhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccc-hhhhhhhccceeecccchhhhhhcc--ccccccccccchh
Confidence 999998888865 45678999999999999999998743 7889999999999999955333333 4555555544444
Q ss_pred cc
Q 001869 988 KV 989 (1002)
Q Consensus 988 ~~ 989 (1002)
..
T Consensus 346 fd 347 (1205)
T KOG0606|consen 346 FD 347 (1205)
T ss_pred hc
Confidence 43
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.5e-22 Score=227.95 Aligned_cols=253 Identities=23% Similarity=0.222 Sum_probs=194.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCC-eEEEEEEeecccccChhHHHHHHHHHHHHHhCC----CCCcceEEEEE-EeCCe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----HPFVPALYASF-QTKTH 743 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~----hpnIv~l~~~~-~~~~~ 743 (1002)
.|++.+.||+|+||.||+|.+..++ ..+|+|+......... ..+..|..++..+. .++++.+++.+ ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999997774 6899998765422111 15667888888886 36999999999 57888
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-----CcEEEEeccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 818 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-----g~vkL~DFG~a 818 (1002)
.|+||+++ |.+|.++......+.++...+..++.|++.+|++||+.|++||||||+|+++... ..+.|.|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 9999999877666789999999999999999999999999999999999999865 36999999999
Q ss_pred cc--cCCCCCCCCCcchhhhhcccCCCCCccccccCcc-cccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001869 819 CL--TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 819 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
+. +....... ..+.+. ...+.||..|+++.++.+...+.+.|+||++.++.+++.|.
T Consensus 175 r~~~~~~~~~~~--------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 175 RRFKYVGDSGGN--------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred ccccccCCCCcc--------------------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 73 21111000 000111 23467999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHh---CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 896 TPFRGKTRQKTFANILH---KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~---~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
+||.+.........+.. ...........+.++..++..+-..+...+|...
T Consensus 235 LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~ 288 (322)
T KOG1164|consen 235 LPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYE 288 (322)
T ss_pred CCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHH
Confidence 99977554322322222 1111111222446677777777778888999843
No 415
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.1e-24 Score=260.29 Aligned_cols=261 Identities=24% Similarity=0.392 Sum_probs=202.0
Q ss_pred ccccccccCCcEEEEEEEEcCCCeEEEEEEeec---ccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---GVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~---~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.....+|.|++|.|+.+......+.++.|.++. ...........+..|..+-..|.|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 455779999999999888877777777776542 11222223333667888888999999988888777766666669
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||++ +|+.++... ..++...+..++.||+.||+|||..||.||||||+|++++.+|.+||+|||.+......
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~---- 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP---- 473 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccC----
Confidence 99999 999999874 45899999999999999999999999999999999999999999999999998553211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCC-hhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~-~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
..........++|+..|+|||++.+..|++ ..||||.|++++.|++|+.||......+..
T Consensus 474 -------------------~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~ 534 (601)
T KOG0590|consen 474 -------------------WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS 534 (601)
T ss_pred -------------------cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc
Confidence 011123455789999999999999999887 799999999999999999999654433221
Q ss_pred -HHHHh-CCC-----CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 908 -ANILH-KDL-----KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 908 -~~i~~-~~~-----~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
..... ... +.+....++...+.+|.+||+.||.+|.| +++|++.+||+.++
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t----i~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT----IEQILNDEWIRSIE 592 (601)
T ss_pred hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec----HHHHhhChHhhhcc
Confidence 11111 000 11111234567789999999999999999 99999999999864
No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.89 E-value=1.1e-21 Score=218.68 Aligned_cols=262 Identities=36% Similarity=0.555 Sum_probs=207.2
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC-CcceEEEEEEeCCeEEEEEe
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~~lV~E 749 (1002)
|.+.+.||.|+|+.||++.+. ..+++|.+.............+.+|+.++..+.|+ +|+.+++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 778899999999999999997 78999999876544444577888999999999988 79999999988888899999
Q ss_pred cCCCCcHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-cEEEEeccCCcccCCCCCC
Q 001869 750 YCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~~~~~ 827 (1002)
|+.+++|.+++..... ..++......++.|++.++.|+|..+++|||+||+||+++..+ .++++|||.+.........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999977765421 2589999999999999999999999999999999999999988 7999999998643211110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 903 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~sDIwSlGvil~elltG~~Pf~~~~~- 903 (1002)
.. ........+||..|++||.+.+ .......|+||+|++++++++|..||.....
T Consensus 159 ~~---------------------~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~ 217 (384)
T COG0515 159 SS---------------------IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS 217 (384)
T ss_pred cc---------------------ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 00 0012356789999999999987 5778899999999999999999999877663
Q ss_pred ---HHHHHHHHhCCCC-CCCCCCCC------HHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 904 ---QKTFANILHKDLK-FPSSTPTS------LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 904 ---~~~~~~i~~~~~~-~~~~~~~s------~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
......+...... ........ ..+.+++.+|+..+|..|.+ ......++|...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~ 280 (384)
T COG0515 218 SATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS----SSSDLSHDLLAH 280 (384)
T ss_pred ccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCC----HHHHhhchHhhC
Confidence 3444444443332 22221111 46889999999999999999 666666655554
No 417
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.1e-22 Score=228.56 Aligned_cols=176 Identities=21% Similarity=0.191 Sum_probs=132.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcC-CCeEEEEEEeecccc--cChhHHHHHHHHHHHHHhCCCCCcce-EEEEEEe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPA-LYASFQT 740 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~-l~~~~~~ 740 (1002)
....+.|.+.+.||+|+||+||+|.+.. ++..+|||.+..... ........+.+|+.+|+.++|+|++. ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3456789999999999999999999876 678889998753311 12334567889999999999999985 4432
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC-CCCCEEEccCCcEEEEeccCCc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDL-KP~NILl~~~g~vkL~DFG~a~ 819 (1002)
+..|+|||||+|++|... .. .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|.
T Consensus 91 -~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred -CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 457999999999999732 11 11 1467889999999999999999999 9999999999999999999997
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 872 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~ 872 (1002)
........ .... ....-.+..+++.|+|||.+..
T Consensus 161 ~~~~~~~~----------------~~~~---~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 161 VFRRRGAL----------------YRIA---AYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ecccCcch----------------hhhh---hhhhhhhhhccCccCCcccCCh
Confidence 65422100 0000 0011125678999999999843
No 418
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.86 E-value=1.6e-20 Score=238.24 Aligned_cols=242 Identities=19% Similarity=0.304 Sum_probs=199.4
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCC----
Q 001869 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ---- 261 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~---- 261 (1002)
.....+..+++.++++++++|. +|+|+++|++|++++||+.+|++|+++..+.+++........+......+.
T Consensus 9 ~~~~~~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (799)
T PRK11359 9 AADGIFFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 (799)
T ss_pred hhhhhHHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccc
Confidence 4446778899999999999998 788999999999999999999999998888777665554455555554443
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhHHHHHHHHHHHhHHHHHH
Q 001869 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTE 341 (1002)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 341 (1002)
.+..+++.+++||..+|+.++..++. .+|. .+++++.+|||++++.+++++.
T Consensus 86 ~~~~e~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT~~~~~~~~~~~-------------------------- 137 (799)
T PRK11359 86 GMSRELQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDASVEMAQKEQTRQ-------------------------- 137 (799)
T ss_pred ccceeeEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeeccchhhhHHHHHH--------------------------
Confidence 24458888999999999999998874 4455 4678999999988766555331
Q ss_pred HHHHccCCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccc
Q 001869 342 LVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFM 421 (1002)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1002)
T Consensus 138 -------------------------------------------------------------------------------- 137 (799)
T PRK11359 138 -------------------------------------------------------------------------------- 137 (799)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEecC
Q 001869 422 GLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFAS 501 (1002)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN 501 (1002)
+..++++++++++++|.+|. ++++|
T Consensus 138 ----------------------------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N 162 (799)
T PRK11359 138 ----------------------------------------------------LIIAVDHLDRPVIVLDPERR---IVQCN 162 (799)
T ss_pred ----------------------------------------------------HHHHHhcCCCcEEEEcCCCc---EEEEC
Confidence 45678899999999999777 99999
Q ss_pred HHHHHHcCCChhhhcCCCCcccc-CCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEE
Q 001869 502 DSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFI 580 (1002)
Q Consensus 502 ~a~~~l~Gys~eEliGk~~~~l~-~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~v 580 (1002)
+++++++||+.++++|++...+. ++.........+...+..+..+..+.+..+++|..+|+.++..|+.+.+|.+.+++
T Consensus 163 ~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~ 242 (799)
T PRK11359 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 (799)
T ss_pred hhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEE
Confidence 99999999999999999876554 45555556666777777777888889999999999999999999999999999999
Q ss_pred EEEecCCcccccc
Q 001869 581 GVQLDGSEHLEPL 593 (1002)
Q Consensus 581 gi~~DITerk~~e 593 (1002)
++.+|||++|+.+
T Consensus 243 ~~~~DITerk~~e 255 (799)
T PRK11359 243 MTFSDITEERQIR 255 (799)
T ss_pred EEeehhhhHHHHH
Confidence 9999999998754
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=3.8e-22 Score=235.84 Aligned_cols=262 Identities=21% Similarity=0.277 Sum_probs=191.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccc-ccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-MLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.|...+.||.+.|=.|.+|++.+ | .++||++-+.. ........+...|++ ...+++||++.+.-+.......|+|-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 68888999999999999999844 4 49999987653 233344445555555 66779999999988888888899999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
+|+ ..+|+|.+..+ ..+..-+.+.|+.||+.||..+|..||+|||||.+||||++-+.+.|+||...+..-
T Consensus 101 qyv-khnLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY------ 171 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTY------ 171 (1431)
T ss_pred HHH-hhhhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCcc------
Confidence 999 77999999775 448888899999999999999999999999999999999999999999999763211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC----------C-CCChhhHHHHHHHHHHHHc-CCC
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----------G-HTSAVDWWALGILLYEMLY-GYT 896 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----------~-~~~~sDIwSlGvil~ellt-G~~ 896 (1002)
..+.+|..+..-+. +..--.+|.|||.+... . .+++.||||+||++.||++ |++
T Consensus 172 -----------LPeDNPadf~fFFD---TSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 172 -----------LPEDNPADFTFFFD---TSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred -----------CCCCCcccceEEEe---cCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 11111111111111 11223479999998542 1 5668999999999999997 899
Q ss_pred CCCC-----------CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC-------CCc
Q 001869 897 PFRG-----------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH-------PFF 958 (1002)
Q Consensus 897 Pf~~-----------~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H-------p~f 958 (1002)
||.- .+....+.+| .+..++.||..|++.||.+|++ |++.|+. .||
T Consensus 238 lF~LSQL~aYr~~~~~~~e~~Le~I------------ed~~~Rnlil~Mi~rdPs~RlS----AedyL~~yrG~~FP~yF 301 (1431)
T KOG1240|consen 238 LFTLSQLLAYRSGNADDPEQLLEKI------------EDVSLRNLILSMIQRDPSKRLS----AEDYLQKYRGLVFPEYF 301 (1431)
T ss_pred cccHHHHHhHhccCccCHHHHHHhC------------cCccHHHHHHHHHccCchhccC----HHHHHHhhhccccHHHH
Confidence 9831 1111111111 2335789999999999999999 8888876 334
Q ss_pred CCCChhhhhccCCCC
Q 001869 959 KGVNWALVRCMNPPE 973 (1002)
Q Consensus 959 ~~~~~~~~~~~~~~~ 973 (1002)
-.+-+.-+.++.++.
T Consensus 302 y~FL~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 302 YSFLYDYLDRFVPLT 316 (1431)
T ss_pred HHHHHHHHHhcCCcc
Confidence 444444445555554
No 420
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.84 E-value=8.2e-21 Score=226.48 Aligned_cols=245 Identities=20% Similarity=0.303 Sum_probs=191.8
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001869 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (1002)
.+.|+.++++++++++++|. +|+++++|++|++++||++++++|++...+.++.........+...+..+..+..++
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKL 79 (494)
T ss_pred hHHHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCccccee
Confidence 46799999999999999998 777999999999999999999999987767666666666777778888888888888
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhHHHHHHHHHHHhHHHHHHHHHHcc
Q 001869 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 347 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 347 (1002)
..++++|..+|+...+.|+++.+|.+.+++++++|||++|+++++++..
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~~------------------------------- 128 (494)
T TIGR02938 80 LNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVANQ------------------------------- 128 (494)
T ss_pred eccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHHH-------------------------------
Confidence 8889999999999999999999999999999999999999998876520
Q ss_pred CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccc
Q 001869 348 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 427 (1002)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (1002)
T Consensus 129 -------------------------------------------------------------------------------- 128 (494)
T TIGR02938 129 -------------------------------------------------------------------------------- 128 (494)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHH
Q 001869 428 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLEL 507 (1002)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l 507 (1002)
+ ..|+.++++++++|+++|.+|. ++++|++|+++
T Consensus 129 --------------------------------------~-----~~~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~ 162 (494)
T TIGR02938 129 --------------------------------------K-----LLIESVVDAAPVAFVLLDPTGR---VILDNQEYKKL 162 (494)
T ss_pred --------------------------------------H-----HHHHHHHhcccceEEEEcCCCC---EEEechhHHHh
Confidence 0 0178899999999999999776 99999999999
Q ss_pred cCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEE-EEEEEEecCCC-EEEEEEEEEeeeCCCCCE---------
Q 001869 508 TEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVT-VQLINYTKSGN-KFWNLFHLQPMRDQKGEV--------- 576 (1002)
Q Consensus 508 ~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~-~e~~~~~kdG~-~~wv~~~~~pi~d~~G~v--------- 576 (1002)
+|+...+..+.....+.+++.... +......+..+. .+.....++|. .+|+.....++.+..|..
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (494)
T TIGR02938 163 ATDLRVKEPAHTVLDLLREAWREA----LAENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQ 238 (494)
T ss_pred hchhhhhHHHHHHHHHhhHHhhhh----hhhcchhhhccccceeeeccCCCceeeEEEecCceEEeecchhhheeccCCC
Confidence 999998887765443433332221 111111122222 23444455555 789999888887766553
Q ss_pred EEEEEEEecCCccccccccC
Q 001869 577 QYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 577 ~~~vgi~~DITerk~~e~~~ 596 (1002)
.+++++++|||++|++|+++
T Consensus 239 ~~~~~~~~DITe~k~~ee~l 258 (494)
T TIGR02938 239 PYLLLTIADISNLREEQERA 258 (494)
T ss_pred chheehHHHHHHHHHHHHHH
Confidence 34567899999999876544
No 421
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=1.1e-20 Score=197.75 Aligned_cols=175 Identities=17% Similarity=0.159 Sum_probs=135.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHH------HHHHHHHHHhCCCCCcceEEEEEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
+..++|++++.||.|+||.||++.+ ++..+|+|+++............ +.+|+..+.++.||+|..+.+++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 4467999999999999999999765 46689999998765444444334 578899999999999999998866
Q ss_pred eC--------CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEE
Q 001869 740 TK--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 740 ~~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
.. +..++||||++|.+|.++.. +++. ...+++.+|..||..|++|||+||+||+++.+| ++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh------ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EE
Confidence 43 35799999999999988732 3332 356999999999999999999999999999988 99
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||.......+... .-++....+..++|+||||+++..+
T Consensus 175 liDfg~~~~~~e~~a~---------------------------------------d~~vler~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK---------------------------------------DRIDLERHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred EEECCCcccccchhhH---------------------------------------HHHHHHhHhcccccccceeEeehHH
Confidence 9999987443111000 0023344466789999999998876
Q ss_pred H
Q 001869 892 L 892 (1002)
Q Consensus 892 l 892 (1002)
.
T Consensus 216 ~ 216 (232)
T PRK10359 216 K 216 (232)
T ss_pred H
Confidence 5
No 422
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=2.9e-20 Score=192.44 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=109.9
Q ss_pred ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhH-----------------------HHHHHHHHHHHHhCCCCC
Q 001869 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----------------------VHRACAEREILDMLDHPF 730 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~hpn 730 (1002)
...||+|+||.||+|.+. +|+.||||+++......... ......|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999996 89999999998653211110 112245899999998877
Q ss_pred cceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCcccCCCCCCCEEEccCCc
Q 001869 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yL-H~~gIiHrDLKP~NILl~~~g~ 809 (1002)
+.....+.... .+|||||++|+++....... ..++...+..++.|++.+|.|| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLKS--HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEecC--CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 75444332222 38999999888776553332 4589999999999999999999 799999999999999998 578
Q ss_pred EEEEeccCCcc
Q 001869 810 VSLTDFDLSCL 820 (1002)
Q Consensus 810 vkL~DFG~a~~ 820 (1002)
++|+|||+|..
T Consensus 156 v~LiDFG~a~~ 166 (190)
T cd05147 156 LYIIDVSQSVE 166 (190)
T ss_pred EEEEEcccccc
Confidence 99999999854
No 423
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=2.1e-20 Score=201.43 Aligned_cols=236 Identities=23% Similarity=0.286 Sum_probs=152.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC----------CCCcceEEEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----------HPFVPALYASFQ 739 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~----------hpnIv~l~~~~~ 739 (1002)
.+.....||.|+++.||.+.+..|++.+|+|++...........+.+.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4567788999999999999999999999999987665444556667766654444332 234444444332
Q ss_pred ---------eC---C-----eEEEEEecCCCCcHHHHHhh---CCCC--CCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001869 740 ---------TK---T-----HVCLITDYCPGGELFLLLDR---QPTK--VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (1002)
Q Consensus 740 ---------~~---~-----~~~lV~E~~~ggsL~~~l~~---~~~~--~l~~~~i~~i~~qil~aL~yLH~~gIiHrDL 797 (1002)
.. . ..+++|+-+ .++|.+++.- .... .+.......+..|+++.+++||..||+|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 236788888 7788877552 1111 1222233345589999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----
Q 001869 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----- 872 (1002)
Q Consensus 798 KP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----- 872 (1002)
+|+|++++.+|.++|+||+.....+.. .. ....+..|.+||....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~-----------------------------~~-~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR-----------------------------YR-CSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE-----------------------------EE-GGGS-TTTS-HHHHHHHTSCH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce-----------------------------ee-ccCCCcccCChhhhhhhcccC
Confidence 999999999999999999976442210 00 0234577999997633
Q ss_pred ---CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCC
Q 001869 873 ---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 942 (1002)
Q Consensus 873 ---~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~R 942 (1002)
..++.+.|.|+||+++|.|.||..||.......... ..+.....++..++.||.+||++||.+|
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~------~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE------WDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG------GGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc------ccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 246779999999999999999999997654322111 0333444678889999999999999988
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=3.9e-20 Score=188.35 Aligned_cols=245 Identities=19% Similarity=0.292 Sum_probs=201.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+......++.+|.+.-.|..|++++.+ ..++.|++..... .......|..|.-.|+.+.||||+.+++.+.....+
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~-t~risrdfneefp~lrifshpnilpvlgacnsppnl 262 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREV-TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNL 262 (448)
T ss_pred CcchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhc-chhhcchhhhhCcceeeecCCchhhhhhhccCCCCc
Confidence 3556677888899999999999999954 4577787765432 233345677788889999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEccCCcEEE--EeccCCcc
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSL--TDFDLSCL 820 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL--~DFG~a~~ 820 (1002)
.++..||+-|+|+..+..+..-.....+...++.+++.|++|||+.. |.---|....++++++-+.+| +|--++..
T Consensus 263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq 342 (448)
T KOG0195|consen 263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ 342 (448)
T ss_pred eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee
Confidence 99999999999999999887777888899999999999999999984 455568888999998877665 34333211
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCC---hhhHHHHHHHHHHHHcCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS---AVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~---~sDIwSlGvil~elltG~~P 897 (1002)
. ....-.|.||+||.+...+.+. ++|+|||++++|||.|...|
T Consensus 343 e----------------------------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevp 388 (448)
T KOG0195|consen 343 E----------------------------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVP 388 (448)
T ss_pred c----------------------------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccc
Confidence 0 1124578899999998876543 79999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 946 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~ 946 (1002)
|..-.+.+.-.++.-..+....++.++.....|+.-|+..||.+||.+-
T Consensus 389 fadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfd 437 (448)
T KOG0195|consen 389 FADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFD 437 (448)
T ss_pred cccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcc
Confidence 9999998888888877777777778899999999999999999999953
No 425
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.4e-19 Score=184.11 Aligned_cols=144 Identities=17% Similarity=0.143 Sum_probs=112.5
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChh-----------------------HHHHHHHHHHHHHhCCCC
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------------------KVHRACAEREILDMLDHP 729 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~-----------------------~~~~~~~E~~il~~l~hp 729 (1002)
+.+.||+|+||.||+|.+. +|+.||||+++........ ....+..|...+.++.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999999875321000 012235788999999999
Q ss_pred CcceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCC
Q 001869 730 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 730 nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g 808 (1002)
++.....+.... .|+||||++|+++....... ..++...+..++.|++.+|.+||+ +||+||||||+|||++ ++
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence 885554444332 48999999887654432222 347888999999999999999999 9999999999999999 88
Q ss_pred cEEEEeccCCcccC
Q 001869 809 HVSLTDFDLSCLTS 822 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~ 822 (1002)
.++|+|||++....
T Consensus 155 ~~~liDFG~a~~~~ 168 (190)
T cd05145 155 KPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEcccceecC
Confidence 99999999996643
No 426
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1.2e-18 Score=178.53 Aligned_cols=202 Identities=20% Similarity=0.177 Sum_probs=141.4
Q ss_pred ccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccC-hhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEe
Q 001869 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-+...|++|+||+||++.. .+.+++.+.+....... .-....+.+|+++|++|+ |++|+.++++ +..|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 4567899999999997776 67788877665432111 112235788999999995 5889999886 44699999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC-CCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDL-KP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|+.|.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||+|..........
T Consensus 79 yI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 79 YLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred eecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 9999999754321 1 1346789999999999999999999 7999999999999999999996433211000
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCC-ChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHT-SAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~-~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
..-. +.. -..-...-...++.|++|+...-. ..+ ...+.++.|+.+|.++|+..|+.++.
T Consensus 150 --r~L~--~rD----------l~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 150 --RLLA--RED----------LRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred --HHHH--HHH----------HHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0000 000 000000112367888888764332 223 47889999999999999999987654
No 427
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=3.4e-19 Score=190.43 Aligned_cols=204 Identities=24% Similarity=0.337 Sum_probs=143.7
Q ss_pred CCCCcceEEEEEEe---------------------------CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHH
Q 001869 727 DHPFVPALYASFQT---------------------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 779 (1002)
Q Consensus 727 ~hpnIv~l~~~~~~---------------------------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~q 779 (1002)
.|||||.++.+|.+ +..+|+||..+ ..+|..|+-.+ ..+....+.++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~---~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR---HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC---CCchHHHHHHHHH
Confidence 59999999987742 23689999999 77999999764 3677778888999
Q ss_pred HHHHHHHHHHcCcccCCCCCCCEEEc--cCC--cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCccc
Q 001869 780 VVVALEYLHCQGIIYRDLKPENVLLQ--GNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 855 (1002)
Q Consensus 780 il~aL~yLH~~gIiHrDLKP~NILl~--~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (1002)
+++|+.|||++||.|||||.+|||+. +|+ .+.|+|||.+-.-. ......+.. ...
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~-~hGlqlpy~--------------------S~~ 408 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD-NHGLQLPYE--------------------SDE 408 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecc-ccccccccc--------------------ccc
Confidence 99999999999999999999999995 343 58899999763211 101111110 001
Q ss_pred ccccCCCcccccccccCCCC------CChhhHHHHHHHHHHHHcCCCCCCCCChHHHH-HHHHhCCCCCCCCCCCCHHHH
Q 001869 856 NSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILLYEMLYGYTPFRGKTRQKTF-ANILHKDLKFPSSTPTSLHAK 928 (1002)
Q Consensus 856 ~~~~Gt~~y~aPE~l~~~~~------~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~-~~i~~~~~~~~~~~~~s~~~~ 928 (1002)
-..-|.-.-||||+....+- ..++|.|+.|.+.||++....||++......- ....+..+ .+-+..+++.++
T Consensus 409 Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL-Palp~~vpp~~r 487 (598)
T KOG4158|consen 409 VDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL-PALPSRVPPVAR 487 (598)
T ss_pred ccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC-CCCcccCChHHH
Confidence 12346778899999865331 23899999999999999999999873322111 11111111 122334788999
Q ss_pred HHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 929 QLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 929 ~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
+|+..+|+.||++|++.. .+..+++---
T Consensus 488 qlV~~lL~r~pskRvsp~-iAANvl~LsL 515 (598)
T KOG4158|consen 488 QLVFDLLKRDPSKRVSPN-IAANVLNLSL 515 (598)
T ss_pred HHHHHHhcCCccccCCcc-HHHhHHHHHH
Confidence 999999999999999953 4455554433
No 428
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=6e-18 Score=176.85 Aligned_cols=135 Identities=22% Similarity=0.226 Sum_probs=106.7
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-----CCCCcceEEEEEEeCC---eE
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-----DHPFVPALYASFQTKT---HV 744 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~~---~~ 744 (1002)
-...||+|+||.||. ++.++.. +||++.... ......+.+|+.+++.+ +||||+++++++.++. .+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 346799999999995 7667666 699886532 22346788999999999 5799999999998863 44
Q ss_pred E-EEEec--CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHcCcccCCCCCCCEEEcc----CCcEEEEecc
Q 001869 745 C-LITDY--CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL-EYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFD 816 (1002)
Q Consensus 745 ~-lV~E~--~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL-~yLH~~gIiHrDLKP~NILl~~----~g~vkL~DFG 816 (1002)
+ +|||| +.+++|.+++++. .+++. ..++.|++.++ +|||+++|+||||||+|||++. ++.++|+||+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 4 78999 5579999999653 36655 35578888888 9999999999999999999974 3479999944
Q ss_pred CC
Q 001869 817 LS 818 (1002)
Q Consensus 817 ~a 818 (1002)
-+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=2.6e-18 Score=208.88 Aligned_cols=197 Identities=25% Similarity=0.356 Sum_probs=158.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~ 742 (1002)
+....|.|-+.||+|+||.||+|.+.. |+.+|||+-++....+..- -.+++.+|+ -+.|..+..++.-.+
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI------~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYI------CLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeee------hHHHHHhhchhhhcchHHHHHHHccCC
Confidence 456789999999999999999999966 9999999877654322222 223444454 244555555566667
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-------CCcEEEEec
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDF 815 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-------~g~vkL~DF 815 (1002)
.-++|+||.+.|+|.+++.. .+.+++..+..++.|++..|+.||..+|||+||||+|+||.. +-.++|+||
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred cceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 78999999999999999974 566999999999999999999999999999999999999952 335999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
|.+..+..-+ ........++|-.|-.+|++.|.++++..|.|.|+.+++-|++|+
T Consensus 846 G~siDm~lfp-------------------------~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 846 GRSIDMKLFP-------------------------DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ccceeeeEcC-------------------------CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 9986543111 112334568899999999999999999999999999999999986
Q ss_pred C
Q 001869 896 T 896 (1002)
Q Consensus 896 ~ 896 (1002)
+
T Consensus 901 y 901 (974)
T KOG1166|consen 901 Y 901 (974)
T ss_pred H
Confidence 4
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.73 E-value=3.9e-18 Score=202.52 Aligned_cols=297 Identities=33% Similarity=0.535 Sum_probs=227.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..+.+.+.+.+-+|.++.++.+.-..+|...++|+...........+.....+..++-...+|.++.....+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 35678888899999999999999888887778887665433333334444444444444456777766656667788999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
|++|..+++|...++..+ ..+.+-.+.++..+..+++|||...+.|+|++|.|++...+|+.++.|||.....+.-+.
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccC
Confidence 999999999999998753 477778888899999999999999999999999999999999999999995433221111
Q ss_pred CCCC---cchhhh-hcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 827 LLLP---TTNEKK-RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 827 ~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
..-. ....-. +.......+....+..+......||+.|.+||.+.+..+...+|+|++|+++++.++|.+||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0000 000000 001111111122223345667899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCC-CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 903 RQKTFANILHKDLKFPSST-PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~-~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
.+..+.+|....+++|... ..+.++++++..+|..+|.+|..+. ++.++..|+||+.++|+.+
T Consensus 1040 pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~-~~~e~k~~~~~~~~~~~~l 1103 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK-GAAEVKGHPFFQDVDWENL 1103 (1205)
T ss_pred hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc-cccccccCCccCCCCcccc
Confidence 9999999999999998764 3578899999999999999999933 3458999999999999987
No 431
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=3.1e-17 Score=175.61 Aligned_cols=145 Identities=20% Similarity=0.154 Sum_probs=113.8
Q ss_pred CcccccccccCCcEEEEEEE-EcCCCeEEEEEEeecccccCh-------------------h--HHHHHHHHHHHHHhCC
Q 001869 670 HFRPIKPLGSGDTGSVHLVE-LCGSGQYFAMKAMDKGVMLNR-------------------N--KVHRACAEREILDMLD 727 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~-~~~~~~~vaiK~~~~~~~~~~-------------------~--~~~~~~~E~~il~~l~ 727 (1002)
.|.+.+.||.|+||.||+|. +..+|+.||||+++....... . ....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999 667899999999885421100 0 1123567999999997
Q ss_pred C--CCcceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-cccCCCCCCCEEE
Q 001869 728 H--PFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLL 804 (1002)
Q Consensus 728 h--pnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl 804 (1002)
+ ..++.++++ . ..|+||||++|++|....... ..+....+..++.||+.+|.+||++| |+||||||+||++
T Consensus 109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe---c-CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 5 334455543 2 348999999998887654332 34666677889999999999999999 9999999999999
Q ss_pred ccCCcEEEEeccCCccc
Q 001869 805 QGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 805 ~~~g~vkL~DFG~a~~~ 821 (1002)
+ ++.++|+|||.+...
T Consensus 183 ~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 183 H-DGKVVIIDVSQSVEL 198 (237)
T ss_pred E-CCCEEEEEChhhhcc
Confidence 9 889999999998643
No 432
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=3.6e-16 Score=165.11 Aligned_cols=138 Identities=21% Similarity=0.237 Sum_probs=114.8
Q ss_pred ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++.||+|++|.||+|.+ .+..+++|.......... .....+.+|+.++..+.|++|+....++...+..++||
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36789999999999987 677899997654322111 12345778999999999999888777777778889999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
||++|++|.+++... .. ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999998653 12 7788899999999999999999999999999999 78999999998854
No 433
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.68 E-value=2e-17 Score=185.11 Aligned_cols=185 Identities=26% Similarity=0.365 Sum_probs=136.7
Q ss_pred CeEEEEEecCCCCcHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 742 THVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~-~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.++||.|++|.-.+|.+++.+ ......+......++.|++.|++| +|.+|+|+||.||++..+..+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 368999999999999999974 334456777888999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
....... ..........+||..||+||.+.+..|+.++||||||+||+||+. -..+|.
T Consensus 406 ~~~~~~~---------------------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e 464 (516)
T KOG1033|consen 406 QDKDETV---------------------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE 464 (516)
T ss_pred cccCCcc---------------------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH
Confidence 5432200 011122345689999999999999999999999999999999996 222221
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
....+..+-.+.++...... -++-..|+..||...|.+||+ +.+.--|+|.
T Consensus 465 ---r~~t~~d~r~g~ip~~~~~d-~p~e~~ll~~lls~~p~~RP~----~~~~~~~~~~ 515 (516)
T KOG1033|consen 465 ---RIATLTDIRDGIIPPEFLQD-YPEEYTLLQQLLSPSPEERPS----AIEVALHEFL 515 (516)
T ss_pred ---HHHhhhhhhcCCCChHHhhc-CcHHHHHHHHhcCCCcccCch----HHHHhhhhhc
Confidence 11222233333332112222 234568999999999999997 5555556554
No 434
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=5.7e-16 Score=162.03 Aligned_cols=133 Identities=18% Similarity=0.213 Sum_probs=107.8
Q ss_pred ccccCCcEEEEEEEEcCCCeEEEEEEeecccccC-----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 001869 676 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 676 ~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
.||+|+||.||++.. ++..+++|......... .....++.+|+.+++.+.|+++....-++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 379999999999985 66789999865432211 11235677899999999988766555556666778999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
++|++|.+++.... . .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~-----~----~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN-----D----ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH-----H----HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999875421 0 7789999999999999999999999999999 88999999998854
No 435
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=7.5e-16 Score=161.06 Aligned_cols=140 Identities=21% Similarity=0.152 Sum_probs=109.0
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh-------------------hHHHHHHHHHHHHHhCCCC-
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-------------------NKVHRACAEREILDMLDHP- 729 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~hp- 729 (1002)
.|.+.+.||.|+||.||++.+. +|+.+|||++........ ........|+.++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3888899999999999999874 799999998765321000 0112356788888888777
Q ss_pred -CcceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC
Q 001869 730 -FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 730 -nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g 808 (1002)
.++.+++ ....++||||++|++|...... .....++.+++.++.++|+.||+||||||+||+++.++
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 4444443 2445899999999998765421 34567889999999999999999999999999999999
Q ss_pred cEEEEeccCCcccC
Q 001869 809 HVSLTDFDLSCLTS 822 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~ 822 (1002)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999985443
No 436
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=1.2e-17 Score=200.07 Aligned_cols=264 Identities=23% Similarity=0.353 Sum_probs=207.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCC-CeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (1002)
...|.+.+.||+|+|+.|-++....+ ...+|+|.+.... ........+..|..+-..+. |+|++.+++.....+..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 34788999999999999998887443 4566777665432 23344455566777877776 999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCcccCCCCCCCEEEccCC-cEEEEeccCCcccCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSC 823 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH-~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~ 823 (1002)
++++|..|+++++.+........+......++.|+..++.|+| ..++.|+||||+|.+++.++ .+++.|||+|..+..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999999884222225777888899999999999999 99999999999999999999 999999999966543
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccC-CCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG-TEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-t~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... ........+| ++.|+|||.+.+. ......|+||.|+++..+++|..|+...
T Consensus 178 ~~g------------------------~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~ 233 (601)
T KOG0590|consen 178 KNG------------------------AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP 233 (601)
T ss_pred cCC------------------------cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence 110 0112234567 9999999999884 5567899999999999999999999765
Q ss_pred ChHHHH-HHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 902 TRQKTF-ANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 902 ~~~~~~-~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
...... ...... ......+...+....+++.+++..+|..|.+ .+++..+||+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s----~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 234 SRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLS----IEELKLDNWLSS 291 (601)
T ss_pred ccccccceeecccccccccCccccCChhhhhcccccccCCchhccc----cccccccccccc
Confidence 443322 222222 1123444556778899999999999999999 999999999998
No 437
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=2e-15 Score=181.61 Aligned_cols=139 Identities=21% Similarity=0.221 Sum_probs=112.1
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccc-----cChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
..|...+.||+|+||.||++.+... .+++|....... .......++.+|+.+++.++|++++.+..++.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3556788999999999999987444 344443222111 111234567889999999999999988877777777
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.++||||++|++|.+++. ....++.|++.+|.|||+.||+||||||+|||+ .++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999999885 246688999999999999999999999999999 578999999999865
No 438
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.62 E-value=5.5e-15 Score=136.31 Aligned_cols=104 Identities=26% Similarity=0.564 Sum_probs=96.3
Q ss_pred CCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 001869 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (1002)
Q Consensus 199 ~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 278 (1002)
|+|++++|. +|+|+++|++|++++||+++|++|+++..++++.........+.+.+..+..+..++.+++++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999 88899999999999999999999999998888888888889999999999999999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEeccch
Q 001869 279 NLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (1002)
Q Consensus 279 ~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (1002)
+.++++|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 439
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.60 E-value=7.7e-15 Score=135.31 Aligned_cols=104 Identities=28% Similarity=0.459 Sum_probs=96.1
Q ss_pred cccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEEE
Q 001869 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKFW 561 (1002)
Q Consensus 482 ~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~w 561 (1002)
|++|+++|.+|. |+++|++|++++||++++++|+++..+.+++......+.+.+++..+..+..+..+++++|+.+|
T Consensus 1 p~~i~i~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDPDGR---ILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEETTSB---EEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECCcCc---EEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999777 99999999999999999999999998988888888889999999999999999999999999999
Q ss_pred EEEEEEeeeCCCCCEEEEEEEEecCCc
Q 001869 562 NLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (1002)
Q Consensus 562 v~~~~~pi~d~~G~v~~~vgi~~DITe 588 (1002)
+.+++.|+++++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=6.4e-15 Score=152.41 Aligned_cols=139 Identities=20% Similarity=0.213 Sum_probs=99.8
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHH---------------------HHHHHHHHHhCCCC--
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR---------------------ACAEREILDMLDHP-- 729 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~---------------------~~~E~~il~~l~hp-- 729 (1002)
+.+.||+|+||.||+|.+. +++.||||++............. ...|...+..+.+.
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3577999999999999986 78999999987642211111111 13456666666443
Q ss_pred CcceEEEEEEeCCeEEEEEecCCCCcHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccC
Q 001869 730 FVPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 730 nIv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~ 807 (1002)
.++.++.+ ...++||||++|+.+.. .+.... . ....+.++.+++.++.++|. .||+|+||||+||+++ +
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C
Confidence 34555543 23589999998854321 121110 1 15678899999999999999 9999999999999999 8
Q ss_pred CcEEEEeccCCccc
Q 001869 808 GHVSLTDFDLSCLT 821 (1002)
Q Consensus 808 g~vkL~DFG~a~~~ 821 (1002)
+.++|+|||.+...
T Consensus 151 ~~~~liDfg~a~~~ 164 (187)
T cd05119 151 GKVYIIDVPQAVEI 164 (187)
T ss_pred CcEEEEECcccccc
Confidence 99999999998654
No 441
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.59 E-value=5.3e-15 Score=169.39 Aligned_cols=198 Identities=24% Similarity=0.349 Sum_probs=151.3
Q ss_pred HHhCCCCCcceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc-ccCCCCCCC
Q 001869 723 LDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-IYRDLKPEN 801 (1002)
Q Consensus 723 l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gI-iHrDLKP~N 801 (1002)
|+.+.|.|+.++++.+.++...++|.+||..|+|.|.+... ...++.-....++++|+.||.|||.-.| .|+.|++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 35678999999999999999999999999999999999763 4557888888899999999999999866 999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-------
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------- 874 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------- 874 (1002)
++++....+||.|||+......... ........-...|.|||.+.+..
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~-------------------------~~~~~~~~~~~lw~aPellr~~~~~~~~~~ 134 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAE-------------------------PEAHHPIRKALLWTAPELLRGALSQSLESA 134 (484)
T ss_pred ceeeeeEEEEechhhhccccccccc-------------------------ccccchhHHHHhccCHHHhccccccccccc
Confidence 9999999999999999865421000 00011112345699999997631
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCCC----ChHHHHHHHHhCCCC-C-CCC---CCCCHHHHHHHHHccccCcCCCCCC
Q 001869 875 HTSAVDWWALGILLYEMLYGYTPFRGK----TRQKTFANILHKDLK-F-PSS---TPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 875 ~~~~sDIwSlGvil~elltG~~Pf~~~----~~~~~~~~i~~~~~~-~-~~~---~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
.+.+.||||||++++|+++...||... +..+.+..+..+... + |.. ....+++..++..||..+|..||++
T Consensus 135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~ 214 (484)
T KOG1023|consen 135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSI 214 (484)
T ss_pred ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccH
Confidence 355799999999999999999999652 223444444441211 1 111 1234468899999999999999995
Q ss_pred h
Q 001869 946 H 946 (1002)
Q Consensus 946 ~ 946 (1002)
.
T Consensus 215 ~ 215 (484)
T KOG1023|consen 215 E 215 (484)
T ss_pred H
Confidence 4
No 442
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=3.1e-14 Score=152.85 Aligned_cols=137 Identities=23% Similarity=0.350 Sum_probs=104.7
Q ss_pred cccc-cCCcEEEEEEEEcCCCeEEEEEEeecccc----------cChhHHHHHHHHHHHHHhCCCCCc--ceEEEEEEeC
Q 001869 675 KPLG-SGDTGSVHLVELCGSGQYFAMKAMDKGVM----------LNRNKVHRACAEREILDMLDHPFV--PALYASFQTK 741 (1002)
Q Consensus 675 ~~LG-~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----------~~~~~~~~~~~E~~il~~l~hpnI--v~l~~~~~~~ 741 (1002)
..|| .|+.|+||.+.. .+..++||.+..... .......++.+|+.++..|.|++| +.++++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 3466 788888888876 377899998864321 011234567889999999988775 6777765432
Q ss_pred -C---eEEEEEecCCC-CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEecc
Q 001869 742 -T---HVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 742 -~---~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
. ..++||||++| .+|.+++.. ..+++.. +.||+.+|.+||++||+||||||.|||++.++.++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE---APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc---CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 2 23599999987 689988864 2355543 5689999999999999999999999999998999999999
Q ss_pred CCcc
Q 001869 817 LSCL 820 (1002)
Q Consensus 817 ~a~~ 820 (1002)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8854
No 443
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.53 E-value=5.4e-14 Score=139.02 Aligned_cols=132 Identities=23% Similarity=0.245 Sum_probs=112.0
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCeEEEEEec
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDY 750 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~lV~E~ 750 (1002)
+++.||.|.++.||++.... ..+++|.+..... ...+..|..+++.+.| .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45789999999999999844 7899998865421 4567889999999976 5899999998888899999999
Q ss_pred CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---CcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 751 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 751 ~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+.|+.+..+ +......++.+++.+|++||.. +++|+||+|+||+++..+.++++|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988777543 4456677889999999999985 799999999999999989999999999854
No 444
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.50 E-value=1.9e-13 Score=127.43 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=99.7
Q ss_pred HHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCC
Q 001869 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDG 274 (1002)
Q Consensus 195 le~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG 274 (1002)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..++++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999 8889999999999999999999999999888888778888889999999988776666544 99
Q ss_pred cEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 001869 275 TPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 275 ~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~ 308 (1002)
...|+.+++.|+.|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 445
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.48 E-value=3.4e-13 Score=126.43 Aligned_cols=112 Identities=21% Similarity=0.369 Sum_probs=95.8
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEE-EEE
Q 001869 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC-GRL 267 (1002)
Q Consensus 189 ~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~-~e~ 267 (1002)
+.|++++++++++++++|. +|+|+++|++|++++||+.++++|+++..++++.........+...+..+.... .+.
T Consensus 1 e~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEV 77 (113)
T ss_dssp HHHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEE
T ss_pred CHHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEE
Confidence 5789999999999999998 888999999999999999999999999988877665567777888887777644 344
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEecc
Q 001869 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DI 303 (1002)
....++|..+|+.+..+|+++.+|++.+++++++||
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 78 RFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 444469999999999999999999999999999997
No 446
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.46 E-value=7.5e-14 Score=183.47 Aligned_cols=267 Identities=9% Similarity=-0.013 Sum_probs=193.8
Q ss_pred ccccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCC-CCcCCCCCCC
Q 001869 168 VRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTD 246 (1002)
Q Consensus 168 ~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~-~~~l~~~~~~ 246 (1002)
+....|||+++++|+++++.++.++.+++..+++++.+|. +|+++++|+++++++||+.++..+.. +..+.++++.
T Consensus 389 i~~~~DITerk~~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d~ 465 (1092)
T PRK09776 389 IAQIEDINELKRTEQVNERLMERITLANEAGGIGIWEWDL---KPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPEDR 465 (1092)
T ss_pred hhhHHhhHHHHHHHHHHHHHHHHHHHHHHhcCceEEEEec---CCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhHH
Confidence 3445899999999999999999999999999999999999 77799999999999999998844422 2245566666
Q ss_pred hHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhHHH
Q 001869 247 PEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIR 326 (1002)
Q Consensus 247 ~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~l~~ 326 (1002)
......+...+.++..+..+++.+++|| .+|+.....+++|++|.+.+++++.+|||++|+++++++...+
T Consensus 466 ~~~~~~~~~~~~~~~~~~~e~r~~~~dG-~~w~~~~~~~~~d~~G~~~~~ig~~~DITerk~~e~~L~~~~~-------- 536 (1092)
T PRK09776 466 QRVEKEIRDALQGRSPFKLEFRIVVKDG-VRHIRALANRVLNKDGEVERLLGINMDMTEVRQLNEALFQEKE-------- 536 (1092)
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEEcCCc-eEEEEEeeEEEECCCCCEEEEEeeeeehhHHHHHHHHHHHHHH--------
Confidence 6667778888888999999999999999 9999999999999999999999999999999999998873211
Q ss_pred HHHHHHHHhHHHHHHHHHHcc-CCCCcccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCC-CCC-CCcccccc-
Q 001869 327 YDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRN-SYG-GGCRTSMQ- 402 (1002)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~-~~~~~~~~- 402 (1002)
....++.++. .....+....+.+.|+..+...|++.+++.|+...+.+...... ... ........
T Consensus 537 -----------~l~~~l~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1092)
T PRK09776 537 -----------RLHITLDSIGEAVVCTDMAMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTS 605 (1092)
T ss_pred -----------HHHHHHhccccEEEEECCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhc
Confidence 1122233333 22334455677789999999999999999999887765321111 000 00000000
Q ss_pred ---cccccchhhccccCCcccccccccccccCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhh
Q 001869 403 ---RISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRK 470 (1002)
Q Consensus 403 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 470 (1002)
...+.+.....++|...|+.....+..+.++...+.. ....|+++++..+++++.
T Consensus 606 ~~~~~~~~~~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v-------------~~~~DITe~k~~e~~L~~ 663 (1092)
T PRK09776 606 RSAAYLEQDVVLHCRSGGSYDVHYSITPLSTLDGENIGSV-------------LVIQDVTESRKMLRQLSY 663 (1092)
T ss_pred CCCccccceEEEEeCCCcEEEEEEEeeeeecCCCCEEEEE-------------EEEEecchHHHHHHHHHh
Confidence 0111222334577777777777766666555433222 235788999998888754
No 447
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.46 E-value=3e-13 Score=126.14 Aligned_cols=110 Identities=25% Similarity=0.334 Sum_probs=99.2
Q ss_pred HHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCC
Q 001869 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 557 (1002)
Q Consensus 478 ~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG 557 (1002)
|++++++++++|.+|+ |+++|+++++++|++.++++|+++..+.++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~~~~---i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGR---IVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEETTSB---EEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECCCCE---EEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6889999999999766 9999999999999999999999988888888777788889999988888777766655 99
Q ss_pred CEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccc
Q 001869 558 NKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 558 ~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~ 591 (1002)
..+|+.+++.|++|.+|++.+++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 448
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.46 E-value=4.1e-13 Score=125.83 Aligned_cols=111 Identities=22% Similarity=0.320 Sum_probs=95.6
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEE-EEE
Q 001869 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV-QLI 551 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~-e~~ 551 (1002)
+|+.++++++++++++|.+|. |+++|++|+++|||+.++++|++...++++++.......+...+..+..... +..
T Consensus 2 ~~~~i~~~~~~~i~~~d~~g~---I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (113)
T PF00989_consen 2 RYRAILENSPDGIFVIDEDGR---ILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVR 78 (113)
T ss_dssp HHHHHHHCSSSEEEEEETTSB---EEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEE
T ss_pred HHHHHHhcCCceEEEEeCcCe---EEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEE
Confidence 489999999999999999777 9999999999999999999999998888887666677788888877766443 444
Q ss_pred EEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecC
Q 001869 552 NYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDG 586 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DI 586 (1002)
...++|+.+|+.++..|+++.+|++.+++++++||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 79 FRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 45569999999999999999999999999999998
No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=7.7e-14 Score=159.79 Aligned_cols=262 Identities=22% Similarity=0.222 Sum_probs=199.7
Q ss_pred ccCCccccccccc--CCcEEEEEEEE--cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 001869 667 NLQHFRPIKPLGS--GDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 741 (1002)
Q Consensus 667 ~~~~y~i~~~LG~--G~~g~Vy~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 741 (1002)
....+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+... .......+-.+|..-...+ .|+|.++.+..+...
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcccccC
Confidence 3456778889999 99999999988 8889999999754332 1222233344565555566 489999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHcCcccCCCCCCCEEEccC-CcEEEEecc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV----ALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFD 816 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~----aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG 816 (1002)
+..|+-+|+| +.+|..+... ....+++..++..+.+... ||.++|..+|+|-|+||.||++..+ ..++++|||
T Consensus 191 ~~lfiqtE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 191 GILFIQTELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred Ccceeeeccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence 9999999999 6888877653 3456899999999999999 9999999999999999999999999 889999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCC
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
+...++..+... .........|...|++||.+.+. ++...|||+||.++.+..+|..
T Consensus 269 ~v~~i~~~~~~~----------------------~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~ 325 (524)
T KOG0601|consen 269 LVSKISDGNFSS----------------------VFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSH 325 (524)
T ss_pred eeEEccCCcccc----------------------ceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcc
Confidence 987765433221 01111223577889999987654 6789999999999999998887
Q ss_pred CCCCC--ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 897 PFRGK--TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 897 Pf~~~--~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
++... +.+..+..+. ++.....+.+..+...+..|+..+|-.|++ ++.+++|++....
T Consensus 326 ~~~~g~~~~W~~~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~----~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 326 LPSVGKNSSWSQLRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLT----AQILTALNVIHSK 385 (524)
T ss_pred cccCCCCCCcccccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhH----HHHHhccccccch
Confidence 76554 3333332222 222222344666777999999999999999 9999999999853
No 450
>PRK13559 hypothetical protein; Provisional
Probab=99.41 E-value=6.1e-12 Score=144.33 Aligned_cols=129 Identities=40% Similarity=0.748 Sum_probs=114.8
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEE
Q 001869 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (1002)
.+...|+.++++++++|+++|..+.+|+|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..
T Consensus 40 ~~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (361)
T PRK13559 40 ASGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVV 119 (361)
T ss_pred hhhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEE
Confidence 44567889999999999999987778889999999999999999999999988777766666667778888888888888
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
+.+.+++||..+|+.+++.|+++.+|.+.+++++++|||++|++++.++
T Consensus 120 e~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~~ 168 (361)
T PRK13559 120 ELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALEA 168 (361)
T ss_pred EEEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHHH
Confidence 9999999999999999999999999999999999999999998876543
No 451
>PRK13559 hypothetical protein; Provisional
Probab=99.40 E-value=4.4e-12 Score=145.53 Aligned_cols=121 Identities=45% Similarity=0.821 Sum_probs=109.1
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001869 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (1002)
.|+.++++++++|+++|.+|.+++|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..+...
T Consensus 44 ~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 123 (361)
T PRK13559 44 LFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVELLN 123 (361)
T ss_pred HHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEEEE
Confidence 38889999999999999866566699999999999999999999999887777777777777788888888888899999
Q ss_pred EecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccc
Q 001869 553 YTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
+++||..+|+..+..|+++.+|.+.+++++++|||++|+.+
T Consensus 124 ~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e 164 (361)
T PRK13559 124 YRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVR 164 (361)
T ss_pred EcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhH
Confidence 99999999999999999999999999999999999999864
No 452
>PRK13557 histidine kinase; Provisional
Probab=99.39 E-value=2.2e-12 Score=156.15 Aligned_cols=148 Identities=39% Similarity=0.699 Sum_probs=122.6
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001869 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (1002)
..|..++++++++|+++|..+.+++|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..+.+
T Consensus 30 ~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (540)
T PRK13557 30 DIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEIL 109 (540)
T ss_pred HHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEEE
Confidence 34899999999999999986556779999999999999999999999988888888877788888888888888888999
Q ss_pred EEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccCCchhhhHHHHHHHHHHhhhhhhh
Q 001869 552 NYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 619 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~~~~~~~v~~~ 619 (1002)
..+++|+.+|+.+++.|+++.+|.+++++++.+|||++++.++.+........+...+..+.|.++..
T Consensus 110 ~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~~~~~~~l~~~~~~i~h~l~~p 177 (540)
T PRK13557 110 NYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQKMEALGQLTGGIAHDFNNL 177 (540)
T ss_pred EEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhhH
Confidence 89999999999999999999999999999999999999987654433333333333444444444433
No 453
>PRK13557 histidine kinase; Provisional
Probab=99.39 E-value=4e-12 Score=153.85 Aligned_cols=132 Identities=37% Similarity=0.739 Sum_probs=120.6
Q ss_pred cccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCc
Q 001869 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (1002)
Q Consensus 183 ~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~ 262 (1002)
........|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (540)
T PRK13557 24 VSDHRSDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERRE 103 (540)
T ss_pred hhhhhhHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCC
Confidence 34456789999999999999999987778999999999999999999999999999888887777778888888888888
Q ss_pred EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
+..+.+.++++|+.+|+.+++.|+.+.+|.+++++++.+|||+++++++++.
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~ 155 (540)
T PRK13557 104 IATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALR 155 (540)
T ss_pred ceEEEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHH
Confidence 8888888999999999999999999999999999999999999999988765
No 454
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.37 E-value=1.8e-12 Score=164.11 Aligned_cols=142 Identities=13% Similarity=0.120 Sum_probs=129.6
Q ss_pred cccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHH
Q 001869 171 SGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDV 250 (1002)
Q Consensus 171 ~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~ 250 (1002)
..+|+++++++.+++++++.++.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..++++.......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 4788999999999999999999999999999999998 8889999999999999999999999988888776666666
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001869 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 251 ~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~ 315 (1002)
......+..+..+..+.+..+++|..+|+.++..|+.+.+|.+.|++++++|||++|+++++++.
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~~ 278 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALEK 278 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHHH
Confidence 66677788888888899999999999999999999999999999999999999999999988763
No 455
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=2.1e-12 Score=150.48 Aligned_cols=184 Identities=22% Similarity=0.303 Sum_probs=115.7
Q ss_pred CCCchhhhccCCcccCCCCCCCCCCchHHHHhhhccc--ccc--ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEe
Q 001869 627 NLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSG--EQI--NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAM 702 (1002)
Q Consensus 627 ~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i--~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~ 702 (1002)
.+=|+++...-+++....|+.. +....+++... ..+ ....|. .+.||.|++|.||+|.. .+|+.||||+.
T Consensus 76 dllp~~~~~~L~~Lqd~v~p~~----~~~~~~~l~~elg~~~~~~F~~fd-~~plasaSigQVh~A~l-~~G~~VaVKv~ 149 (437)
T TIGR01982 76 DLLPADIAEELSLLQDRVPPFD----FKVARKVIEAALGGPLEELFAEFE-EKPLAAASIAQVHRARL-VDGKEVAVKVL 149 (437)
T ss_pred ccCCHHHHHHHHHHhcCCCCCC----HHHHHHHHHHHhCcCHHHHHhhCC-CcceeeeehhheEEEEe-cCCCEEEEEee
Confidence 3456666666666665555433 33333332221 111 112333 36799999999999997 47899999998
Q ss_pred ecccccChh---------------------------HH----------HHHHHHHHHHHhC----C-CCCc--ceEEEEE
Q 001869 703 DKGVMLNRN---------------------------KV----------HRACAEREILDML----D-HPFV--PALYASF 738 (1002)
Q Consensus 703 ~~~~~~~~~---------------------------~~----------~~~~~E~~il~~l----~-hpnI--v~l~~~~ 738 (1002)
++.....-. .. -.+.+|...+.++ . +++| ++++.
T Consensus 150 rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~-- 227 (437)
T TIGR01982 150 RPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYW-- 227 (437)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEeh--
Confidence 765211000 00 0133444444444 2 3433 23332
Q ss_pred EeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHH-HHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV-ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~-aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
......++||||++|++|.++....... .. ...++.+++. .+..+|..|++|+|+||.||+++.+|.++|+|||+
T Consensus 228 ~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~ 303 (437)
T TIGR01982 228 DRTSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGI 303 (437)
T ss_pred hhcCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCC
Confidence 2234569999999999999876532111 22 2345566665 47889999999999999999999999999999999
Q ss_pred CcccC
Q 001869 818 SCLTS 822 (1002)
Q Consensus 818 a~~~~ 822 (1002)
+...+
T Consensus 304 ~~~l~ 308 (437)
T TIGR01982 304 VGRLS 308 (437)
T ss_pred eeECC
Confidence 86654
No 456
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.36 E-value=4.1e-13 Score=158.02 Aligned_cols=187 Identities=18% Similarity=0.209 Sum_probs=113.5
Q ss_pred CCchhhhccCCcccCCCCCCCCCCchHHHHhhhccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccc
Q 001869 628 LTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM 707 (1002)
Q Consensus 628 ~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~ 707 (1002)
+=|+++...-+++....|+.........+..-+..+..-....|.. +.||+|++|+||+|..+.+|+.||||+.++...
T Consensus 79 llP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~ 157 (537)
T PRK04750 79 LFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDIL 157 (537)
T ss_pred cCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchH
Confidence 4477777666666655553332222222222222111112356777 899999999999999988899999999986521
Q ss_pred cC---------------------------h----hHHHHH------HHHHHHHHhC----CCCCcceEEEEEE-eCCeEE
Q 001869 708 LN---------------------------R----NKVHRA------CAEREILDML----DHPFVPALYASFQ-TKTHVC 745 (1002)
Q Consensus 708 ~~---------------------------~----~~~~~~------~~E~~il~~l----~hpnIv~l~~~~~-~~~~~~ 745 (1002)
.. . +....+ .+|...+.++ .+...+.+-.++. .....+
T Consensus 158 ~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~V 237 (537)
T PRK04750 158 PVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETV 237 (537)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCce
Confidence 00 0 011122 2333333333 2333333333333 245568
Q ss_pred EEEecCCCCcHHHHH--hhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC----cEEEEeccC
Q 001869 746 LITDYCPGGELFLLL--DRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDL 817 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l--~~~~~--~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g----~vkL~DFG~ 817 (1002)
+||||+.|+.+.++. ...+. ..+.+..+..++.|+ +..|++|+|+||.||+++.+| .++++|||+
T Consensus 238 LvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGi 310 (537)
T PRK04750 238 MVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310 (537)
T ss_pred EEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecce
Confidence 999999999998753 22210 023333444444444 468999999999999999888 999999999
Q ss_pred CcccC
Q 001869 818 SCLTS 822 (1002)
Q Consensus 818 a~~~~ 822 (1002)
+...+
T Consensus 311 vg~l~ 315 (537)
T PRK04750 311 VGSLN 315 (537)
T ss_pred EEECC
Confidence 86654
No 457
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.35 E-value=5.2e-12 Score=159.91 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=121.3
Q ss_pred CCCchhhHHHHHHHhhc-ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHH
Q 001869 455 RPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533 (1002)
Q Consensus 455 ~~~~~~~~~~~~~l~~~-~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~ 533 (1002)
..++.++.+.++++++. ..++.++++++++|+++|.+|+ |+++|++|++++||+.++++|++...+.+++......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGE---FSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECCCCc---EEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 45667777777777655 6689999999999999999777 9999999999999999999999988888777666666
Q ss_pred HHHHHHHhcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccccc
Q 001869 534 RKIRAAIDNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (1002)
Q Consensus 534 ~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~ 595 (1002)
......+..+..+..+.+..+++|..+|+.++..|+++.+|.+.+++++++|||++|+.+++
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~ 275 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDA 275 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHH
Confidence 66677778888899999999999999999999999999999999999999999999987653
No 458
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.29 E-value=5.5e-11 Score=137.44 Aligned_cols=240 Identities=17% Similarity=0.163 Sum_probs=158.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|.+ ....-++.+..-.+..+.++.++.|...+... ........+-+.-|+.++||||+++++.++..+..|||+|
T Consensus 14 pY~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTE 89 (690)
T KOG1243|consen 14 PYDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTE 89 (690)
T ss_pred Cccc-ccccCCCcccccccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEee
Confidence 4555 33333333333245566778889888887542 2344556677888999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH-~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
.+ ..|..+++. ++...+..-+.||+.||.||| +.+++|++|.-+.|+|+..|..||++|.++.....-+.
T Consensus 90 rV--~Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-- 160 (690)
T KOG1243|consen 90 RV--RPLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-- 160 (690)
T ss_pred cc--ccHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--
Confidence 98 557777766 446677778899999999997 56899999999999999999999999998854321110
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
......---.|..|+.+.... ...|.|-|||++++++.|..+- ......
T Consensus 161 -------------------------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~~~--~~~~~~-- 209 (690)
T KOG1243|consen 161 -------------------------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSLLT--KTDLSN-- 209 (690)
T ss_pred -------------------------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcccCc--chhhhc--
Confidence 000111112356665543332 3579999999999999983331 111100
Q ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc-CCCcCCCChh
Q 001869 909 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK-HPFFKGVNWA 964 (1002)
Q Consensus 909 ~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~-Hp~f~~~~~~ 964 (1002)
+. .++.....+..+-+.-.+..||.....+..++. |+||+.--..
T Consensus 210 ---------~~--~ipk~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd 255 (690)
T KOG1243|consen 210 ---------TG--KIPKALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVD 255 (690)
T ss_pred ---------cC--ccchhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHH
Confidence 00 112223334434444456666664344555555 8888874333
No 459
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=9.1e-12 Score=131.45 Aligned_cols=211 Identities=22% Similarity=0.263 Sum_probs=147.2
Q ss_pred HHHhCCCCCcceEEEEEEeC-----CeEEEEEecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHc--Cc
Q 001869 722 ILDMLDHPFVPALYASFQTK-----THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ--GI 792 (1002)
Q Consensus 722 il~~l~hpnIv~l~~~~~~~-----~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~--gI 792 (1002)
-+-.+-|.|||+++.|+.+. ..+.+++|||..|+|..+|++. ....+.....++|+.||+.||.|||+. -|
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 34556799999999998653 4588999999999999999852 234588889999999999999999998 49
Q ss_pred ccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC
Q 001869 793 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 872 (1002)
Q Consensus 793 iHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~ 872 (1002)
+|+++..+-|++..+|-+|+.--.-... .+.. ... .........|-++|.+||.=..
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~---h~s~--~~~------------------~~~Ek~~~~~~~g~~a~~sg~~ 256 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDST---HPSV--NST------------------REAEKSVNTSLPGFSAPESGTT 256 (458)
T ss_pred ccCCcchhheeecCCceEEecccCcccc---chhh--hhh------------------hHhhhhccccCCccccCCcCcc
Confidence 9999999999999998888643221110 0000 000 0001122346788999997655
Q ss_pred CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 873 AGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 873 ~~~~~~sDIwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
...+.++|||+||....+|..|..--..... ...-..+.+--+.+. ...-++++.+||.-.|+.||+ ++.
T Consensus 257 tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le-----n~lqr~~i~kcl~~eP~~rp~----ar~ 327 (458)
T KOG1266|consen 257 TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE-----NGLQRGSITKCLEGEPNGRPD----ARL 327 (458)
T ss_pred cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc-----CccccCcCcccccCCCCCCcc----hhh
Confidence 5566689999999999999887665322221 111112221111111 112346899999999999999 999
Q ss_pred HHcCCCcCCCChh
Q 001869 952 IKKHPFFKGVNWA 964 (1002)
Q Consensus 952 lL~Hp~f~~~~~~ 964 (1002)
++-||-+-.+.--
T Consensus 328 llfHpllfeVhsl 340 (458)
T KOG1266|consen 328 LLFHPLLFEVHSL 340 (458)
T ss_pred hhcCceeeecchH
Confidence 9999988776543
No 460
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=1e-10 Score=120.21 Aligned_cols=140 Identities=15% Similarity=0.117 Sum_probs=102.1
Q ss_pred ccccccCCcEEEEEEEEcC------CCeEEEEEEeeccccc-------------------ChhHHHHHH----HHHHHHH
Q 001869 674 IKPLGSGDTGSVHLVELCG------SGQYFAMKAMDKGVML-------------------NRNKVHRAC----AEREILD 724 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~------~~~~vaiK~~~~~~~~-------------------~~~~~~~~~----~E~~il~ 724 (1002)
...||.|.-+.||.|.... .+..+|||+.+..... ..+....+. +|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998643 3579999988742210 011122333 6888888
Q ss_pred hCC--CCCcceEEEEEEeCCeEEEEEecCCCCcHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCcccCCCCCC
Q 001869 725 MLD--HPFVPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPE 800 (1002)
Q Consensus 725 ~l~--hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~i~~i~~qil~aL~yL-H~~gIiHrDLKP~ 800 (1002)
++. .-+++.++.+ ..-+|||||+.++.+.. .++. ..++......+..+++.+|..| |+.||||+||+|.
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 884 3567777764 34589999996654432 2222 2356667778889999999999 8999999999999
Q ss_pred CEEEccCCcEEEEeccCCccc
Q 001869 801 NVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 801 NILl~~~g~vkL~DFG~a~~~ 821 (1002)
|||+. ++.+.|+|||.+...
T Consensus 155 NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HEEEE-CCcEEEEECCCceeC
Confidence 99997 578999999988543
No 461
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.25 E-value=8.4e-11 Score=146.19 Aligned_cols=127 Identities=39% Similarity=0.747 Sum_probs=114.9
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEE
Q 001869 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLL 268 (1002)
Q Consensus 189 ~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~ 268 (1002)
..++.+++.+++++++.|..+.+|+|+|+|+++++++||+.++++|+++..+.++.........+...+..+..+..+++
T Consensus 148 r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 227 (665)
T PRK13558 148 RLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELR 227 (665)
T ss_pred HHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEE
Confidence 45678999999999999866668899999999999999999999999988787777666666778888888888899999
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001869 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~ 315 (1002)
.++++|..+|+.++..|+.+.+|.+.+++++++|||++|++|++++.
T Consensus 228 ~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~ 274 (665)
T PRK13558 228 NYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQR 274 (665)
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998874
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=6.4e-12 Score=144.16 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=187.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEc-CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
....+|-.+..||.|.|+.|+.+.-. .++..|++|.+.........+... ..|.-+...+ .|.+++.++..+...+.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~s-l~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFS-LGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcc-hhhhhHhhHhhcccccCCCCCCcccccc
Confidence 45678999999999999999998765 678899999888765444443332 3455555555 68999998888888888
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-CcEEEEeccCCcccC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~~ 822 (1002)
.|+=.|||+++++...... ...+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||.+..+.
T Consensus 341 ~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred ccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence 8899999999998877643 2347888899999999999999999999999999999999976 788999999875322
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccc--ccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI--APEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~--aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... ....+.-.++ ++..+....+..+.|++|||..+++.++|...-..
T Consensus 419 ~~~------------------------------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~ 468 (524)
T KOG0601|consen 419 FSS------------------------------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES 468 (524)
T ss_pred eec------------------------------ccccccccccccchhhccccccccccccccccccccccccCcccCcc
Confidence 111 1122333444 45555566778899999999999999998765443
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
.... ..+..+.. +........++.+.+.++..++..|+. +.++..|.=|.
T Consensus 469 ~~~~---~~i~~~~~--p~~~~~~~~~q~~~kv~~~~~~~~~~l----~~~l~~~~~~~ 518 (524)
T KOG0601|consen 469 GVQS---LTIRSGDT--PNLPGLKLQLQVLLKVMINPDRKRRPS----AVELSLHSEFY 518 (524)
T ss_pred cccc---eeeecccc--cCCCchHHhhhhhhhhhcCCccccchh----hhhhcccchhh
Confidence 3322 22333322 222233467888999999999999999 77777776554
No 463
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=3.6e-11 Score=122.14 Aligned_cols=127 Identities=24% Similarity=0.291 Sum_probs=95.6
Q ss_pred ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCeEEEEEecCC
Q 001869 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
++.|+.|.++.||++.. .+..|++|....... ....+..|..+++.+.+.+ +++++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 35689999999999987 477899998765421 1224567888888886544 455655433 23479999999
Q ss_pred CCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc-----ccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-----IYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gI-----iHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
|.++.... . ....++.+++.+|+.||..++ +|+|++|+||+++ ++.++++|||.+.
T Consensus 75 G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98876430 1 113456799999999999985 9999999999999 6789999999884
No 464
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.21 E-value=1.2e-10 Score=114.58 Aligned_cols=146 Identities=19% Similarity=0.211 Sum_probs=113.6
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEe-----ecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAM-----DKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~-----~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+..|-+|+-+.|+++.+ .|+.++||.= +.+.+...-...+..+|+.+|.++.--.|.-..-+|.+...-.|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567789999999999987 7788888842 233344445567788899999888655555555567677777899
Q ss_pred EecCCC-CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---cEEEEeccCCcc
Q 001869 748 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 820 (1002)
Q Consensus 748 ~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g---~vkL~DFG~a~~ 820 (1002)
|||++| .++.+++...............++.+|-..+.-||.++|||+||..+||++.++| .+.|+|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999976 5888888765444455555688999999999999999999999999999998765 358999999843
No 465
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.19 E-value=6.9e-11 Score=139.56 Aligned_cols=133 Identities=17% Similarity=0.081 Sum_probs=100.0
Q ss_pred ccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCC-hhHHcCCCCCcCCCCCCChH
Q 001869 170 SSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYT-SKEVVGRNCRFLQGAGTDPE 248 (1002)
Q Consensus 170 ~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys-~eEliG~~~~~l~~~~~~~~ 248 (1002)
...||+.+++.+.++ .+.|+.++++++++|+++|. +|+|+++|++|++++||+ .++++|+++..+.++... .
T Consensus 236 ~~~dit~~~~~e~~~---~~~~~~l~e~~~d~I~v~D~---~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~~-~ 308 (442)
T TIGR02040 236 QLSPAGATQPVGDEL---SENLARLYHEAPDAIVFSDA---DGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGGV-D 308 (442)
T ss_pred EEcccchhhhhhHHH---HHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCcc-c
Confidence 447788777665443 24799999999999999998 788999999999999997 578999998755443221 1
Q ss_pred HHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 001869 249 DVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (1002)
Q Consensus 249 ~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (1002)
....+......+.....+....+++|+.+|++++++|+.+.++ ..++++++|||+|++.++
T Consensus 309 ~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDITeR~~~~~ 369 (442)
T TIGR02040 309 LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDISRRLTMRD 369 (442)
T ss_pred HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecchhhccCCC
Confidence 2222333334444445667778999999999999999976544 457889999999988853
No 466
>PRK10060 RNase II stability modulator; Provisional
Probab=99.19 E-value=2e-10 Score=142.02 Aligned_cols=136 Identities=13% Similarity=0.157 Sum_probs=109.2
Q ss_pred ccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCc-CCCCCCChHHHHHHH
Q 001869 176 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIR 254 (1002)
Q Consensus 176 ~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~i~ 254 (1002)
+.......+.....+++.+++.++++|+++|. +|+|+++|++|++++||+.+|++|+++.. +.++.........+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~ 174 (663)
T PRK10060 98 DTPSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIR 174 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHH
Confidence 33334445566677889999999999999999 78899999999999999999999999764 445544455566777
Q ss_pred HHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCC-CEEEEEEEEeccchhhHHHHHhhc
Q 001869 255 ETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG-KVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 255 ~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G-~v~~~v~~~~DITerk~~e~~l~~ 315 (1002)
..+..+..+.++.+..+++|..+|+.....+ .+..| ...+++++.+|||++++++++++.
T Consensus 175 ~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~~-~~~~g~~~~~~i~~~~DITe~k~~e~~l~~ 235 (663)
T PRK10060 175 GFFRSGNAYEVERWIKTRKGQRLFLFRNKFV-HSGSGKNEIFLICSGTDITEERRAQERLRI 235 (663)
T ss_pred HHHhcCCceEEEEEEEeCCCCEEEEEeeeEE-EcCCCCceEEEEEEEEechHHHHHHHHHHH
Confidence 7888888899999999999999988765444 44444 456788999999999999988764
No 467
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.17 E-value=3e-10 Score=141.28 Aligned_cols=122 Identities=40% Similarity=0.755 Sum_probs=108.8
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.+++.+++++++.|..+.+++|+++|+++++++||+.++++|+++..+.+++........+...+..+..+..+++.+
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 229 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELRNY 229 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 57789999999999986444566999999999999999999999998878777777667777788888888899999999
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccccc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~ 595 (1002)
+++|..+|+.++..|+++.+|.+.+++++++|||++|+.|++
T Consensus 230 ~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~ 271 (665)
T PRK13558 230 RKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELA 271 (665)
T ss_pred CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999987553
No 468
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=3.3e-10 Score=112.27 Aligned_cols=134 Identities=21% Similarity=0.205 Sum_probs=101.0
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccc-----cChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
..+++|+-+.+|.+.. -|..+++|.=.+... ..+-...+..+|..++.++.--.|...+=++.+.+...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4578999999999966 344577775333222 222234556679999988865555555555666677789999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
|++|..|.+++... ...++..+-.-+.-||..||+|+||.++||+++.++ +.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999999998653 144677788888999999999999999999999654 99999999853
No 469
>PRK10060 RNase II stability modulator; Provisional
Probab=99.14 E-value=1.7e-10 Score=142.54 Aligned_cols=118 Identities=17% Similarity=0.168 Sum_probs=96.2
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCcccc-CCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN 552 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~-~~~~~~~~~~~l~~~l~~~~~~~~e~~~ 552 (1002)
++.+++.++++|+++|.+|+ |+++|++|++++||+.+|++|+++..+. ++++.......+...+..+..+..|.+.
T Consensus 113 ~~~v~~~~~~gI~i~D~~g~---I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 113 AEQVVSEANSVIVILDSRGN---IQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHhhCCceEEEEeCCCC---EEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 67899999999999999777 9999999999999999999999965544 4554455566777778888889999999
Q ss_pred EecCCCEEEEEEEEEeeeCCCC-CEEEEEEEEecCCcccccccc
Q 001869 553 YTKSGNKFWNLFHLQPMRDQKG-EVQYFIGVQLDGSEHLEPLRN 595 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G-~v~~~vgi~~DITerk~~e~~ 595 (1002)
.+++|..+|+..... +.+..| ...+++++.+|||++|+.++.
T Consensus 190 ~~~~G~~~~~~~~~~-~~~~~g~~~~~~i~~~~DITe~k~~e~~ 232 (663)
T PRK10060 190 KTRKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQER 232 (663)
T ss_pred EeCCCCEEEEEeeeE-EEcCCCCceEEEEEEEEechHHHHHHHH
Confidence 999999999876544 444444 446788999999999976443
No 470
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.11 E-value=9e-10 Score=100.15 Aligned_cols=120 Identities=20% Similarity=0.408 Sum_probs=98.0
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCC-cEEEEE
Q 001869 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRL 267 (1002)
Q Consensus 189 ~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~ 267 (1002)
+.++.++++++++++++|. +|+++++|+++++++|++.++++|+.+..+.++.........+...+..+. ....+.
T Consensus 3 ~~~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (124)
T TIGR00229 3 ERYRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEER 79 (124)
T ss_pred hHHHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEe
Confidence 5678899999999999998 777999999999999999999999988776666555555555555555332 234455
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHH
Q 001869 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~ 312 (1002)
....++|..+|+.....|+. .+|...++++++.|||++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 80 RVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred eeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 55688999999999999998 788899999999999999988765
No 471
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.11 E-value=1.6e-10 Score=137.76 Aligned_cols=118 Identities=25% Similarity=0.438 Sum_probs=106.7
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
|+.++++++++++++|.+|. ++++|+++++++||++++++|++...+.++.........+...+..+..+..+....
T Consensus 6 ~~~i~~~~~~~i~~~d~~g~---~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 6 YRQTVDQAPLAISITDLKAN---ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred HHHHHHhCCceEEEECCCCc---EEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 89999999999999999777 999999999999999999999987777766666667777788888888888888889
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
+++|..+|+..+..|+++.+|.+.+++++++|||++|+.++
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~ 123 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQ 123 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHH
Confidence 99999999999999999999999999999999999998654
No 472
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.06 E-value=7.3e-10 Score=99.89 Aligned_cols=86 Identities=29% Similarity=0.407 Sum_probs=74.9
Q ss_pred EEecCHHHHHHcCCChhhhcCCC----CccccCCCCCHHHHHHHHH-HHhcCCcEEEEEEEEecCCCEEEEEEEEEeeeC
Q 001869 497 IIFASDSFLELTEYSREEILGRN----CRFLQGPETDPATVRKIRA-AIDNQTDVTVQLINYTKSGNKFWNLFHLQPMRD 571 (1002)
Q Consensus 497 I~~vN~a~~~l~Gys~eEliGk~----~~~l~~~~~~~~~~~~l~~-~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d 571 (1002)
|+|+|+++++++||+++++ +.. +..++||++...+.+.+.. .+..+..+..+++++++||+.+|++.++.+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 7788999999999999999 778888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 001869 572 QKGEVQYFIGVQ 583 (1002)
Q Consensus 572 ~~G~v~~~vgi~ 583 (1002)
.+|+++.++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999984
No 473
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.05 E-value=1e-09 Score=139.62 Aligned_cols=141 Identities=14% Similarity=0.183 Sum_probs=117.5
Q ss_pred cccccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCC-CCCC
Q 001869 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQ-GAGT 245 (1002)
Q Consensus 167 ~~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~-~~~~ 245 (1002)
.+...+|||++++.++ ....+..++++++++++++|. +|+++++|+++++++||+.++++|+.+..+. ++..
T Consensus 118 ~~~~~~DiT~~~~~~~----~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~~ 190 (799)
T PRK11359 118 YLALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDP---ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 (799)
T ss_pred EEEEEeeccchhhhHH----HHHHHHHHHhcCCCcEEEEcC---CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCCC
Confidence 4555689987666543 456677889999999999998 7889999999999999999999999877544 4555
Q ss_pred ChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 246 DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 246 ~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
.......+...+..+..+..+.+..+++|..+|+.++..|+.+.+|.+.+++++.+|||++|++++..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~~ 259 (799)
T PRK11359 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 (799)
T ss_pred cHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHHH
Confidence 555566677777777778888889999999999999999999999999999999999999998876543
No 474
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.03 E-value=7.8e-09 Score=116.02 Aligned_cols=205 Identities=17% Similarity=0.220 Sum_probs=146.8
Q ss_pred cEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE----eCCeEEEEEecCCC-CcH
Q 001869 682 TGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHVCLITDYCPG-GEL 756 (1002)
Q Consensus 682 ~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~~~lV~E~~~g-gsL 756 (1002)
..+.|+|....+|..|++|.++........ ....-.++++++.|+|||++.++|. ....+++|++|+++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 357899999999999999999543322221 2223567899999999999999987 34578999999974 677
Q ss_pred HHHHhhC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 757 FLLLDRQ-------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 757 ~~~l~~~-------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.++.-.. .+...++..+|.|+.||..||.++|+.|+..+-|.|.+||++.+-+++|...|.......
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 7764321 233578899999999999999999999999999999999999888899988887643321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC-CCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR-GKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~-~~~ 902 (1002)
++ . +-+.+ -.+-|.=.||.+++.|.||..--. ...
T Consensus 446 d~---------------------------------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~ 481 (655)
T KOG3741|consen 446 DP---------------------------------------T--EPLES---QQQNDLRDLGLLLLALATGTENSNRTDS 481 (655)
T ss_pred CC---------------------------------------C--cchhH---HhhhhHHHHHHHHHHHhhcccccccccc
Confidence 11 0 11111 126789999999999999965421 122
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCC
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
..+.....+. ..++.+++++|..+...++++
T Consensus 482 ~~~s~~~~I~--------~~yS~D~rn~v~yl~s~~~~~ 512 (655)
T KOG3741|consen 482 TQSSHLTRIT--------TTYSTDLRNVVEYLESLNFRE 512 (655)
T ss_pred hHHHHHHHhh--------hhhhHHHHHHHHHHHhcCccc
Confidence 2222111111 125778888888888888874
No 475
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.01 E-value=2.8e-09 Score=96.90 Aligned_cols=116 Identities=22% Similarity=0.342 Sum_probs=95.5
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcC-CcEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLIN 552 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~-~~~~~e~~~ 552 (1002)
++.++++++++++++|.+|. ++++|+++++++|++.++++|+....+.++.........+...+..+ .....+..+
T Consensus 5 ~~~~~~~~~~~~~~~d~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDLEGN---ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRV 81 (124)
T ss_pred HHHHHhhCCceEEEEcCCCc---EEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeee
Confidence 78899999999999999777 99999999999999999999998777776666555555555555533 234455555
Q ss_pred EecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccc
Q 001869 553 YTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
..++|..+|+.....|+. .+|...++++++.|||++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~ 121 (124)
T TIGR00229 82 RRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAE 121 (124)
T ss_pred EcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHH
Confidence 688999999999999998 7888999999999999998754
No 476
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=98.97 E-value=2.9e-09 Score=95.93 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=74.0
Q ss_pred EEEcchHHHHHcCCChhHHcCCC----CCcCCCCCCChHHHHHHHH-HHHcCCcEEEEEEEEecCCcEEEEEEEeeeeec
Q 001869 214 IMYASAGFFKMTGYTSKEVVGRN----CRFLQGAGTDPEDVAKIRE-TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKD 288 (1002)
Q Consensus 214 I~~~N~a~~~l~Gys~eEliG~~----~~~l~~~~~~~~~~~~i~~-~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d 288 (1002)
|+|+|+++++++||+++++ |.. +..++||++.......+.. .+..+..+..+++++++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 776 6678899999999999998 788888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 001869 289 DEGKVLKFIGMQ 300 (1002)
Q Consensus 289 ~~G~v~~~v~~~ 300 (1002)
++|++.+++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999874
No 477
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.97 E-value=2.7e-09 Score=113.15 Aligned_cols=140 Identities=23% Similarity=0.305 Sum_probs=107.3
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCcceEEEEEEeC---CeEEEEEe
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTK---THVCLITD 749 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~---~~~~lV~E 749 (1002)
+.|+.|.++.||++... +|+.|++|+....... .....+..|..+++.+.+ .++++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999874 3678999987654221 134567889999999965 4567787776654 36789999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------------- 789 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~---------------------------------------- 789 (1002)
|++|.++.+.+.. ..++......++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999988776532 236777777788888888888874
Q ss_pred ----------------cCcccCCCCCCCEEEcc--CCcEEEEeccCCcc
Q 001869 790 ----------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 820 (1002)
Q Consensus 790 ----------------~gIiHrDLKP~NILl~~--~g~vkL~DFG~a~~ 820 (1002)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 56789999998843
No 478
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.86 E-value=5.8e-08 Score=105.61 Aligned_cols=134 Identities=19% Similarity=0.056 Sum_probs=94.1
Q ss_pred EEEEEEEcCCCeEEEEEEeeccccc---C-----hhHHHHHHHHHHHHHhCCCCC--cceEEEEEEe-----CCeEEEEE
Q 001869 684 SVHLVELCGSGQYFAMKAMDKGVML---N-----RNKVHRACAEREILDMLDHPF--VPALYASFQT-----KTHVCLIT 748 (1002)
Q Consensus 684 ~Vy~a~~~~~~~~vaiK~~~~~~~~---~-----~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~-----~~~~~lV~ 748 (1002)
.|+.+.. .|+.|.||........ . ........+|...+..|..-+ ++.+..++.. ....++||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3556554 5778999966432100 0 011123667888887774333 3344555543 23578999
Q ss_pred ecCCCC-cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-------CCcEEEEeccCCc
Q 001869 749 DYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDFDLSC 819 (1002)
Q Consensus 749 E~~~gg-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-------~g~vkL~DFG~a~ 819 (1002)
|++++. +|.+++........+......++.+++..+.-||.+||+|+||+++|||++. ++.+.|+||+.+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999876 8999986432234566778889999999999999999999999999999985 4689999999874
No 479
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.83 E-value=1.9e-09 Score=125.46 Aligned_cols=173 Identities=19% Similarity=0.309 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccc
Q 001869 778 AEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 856 (1002)
Q Consensus 778 ~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (1002)
.+++.||.|+|.. ++||++|.|++|.++.+|..||+.|+++........ ++- .........
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--~p~----------------~~yd~~lp~ 167 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--YPF----------------SEYDPPLPL 167 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc--ccc----------------ccCCCCCCh
Confidence 4556999999986 899999999999999999999999998754322111 000 000111112
Q ss_pred cccCCCcccccccccCCCCCChhhHHHHHHHHHHHH-cCCCCCCCCChHHHHHHHH--hCCCCCCCCCCCCHHHHHHHHH
Q 001869 857 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANIL--HKDLKFPSSTPTSLHAKQLMYR 933 (1002)
Q Consensus 857 ~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~s~~~~~Ll~~ 933 (1002)
...-...|.|||++.+...+.++|+|||||++|.+. .|+.-+........+..-. .+-..+-....++.++++=|.+
T Consensus 168 ~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k 247 (700)
T KOG2137|consen 168 LLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKK 247 (700)
T ss_pred hhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHH
Confidence 234467899999999988889999999999999999 5666665543332222111 1111222234578899999999
Q ss_pred ccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCC
Q 001869 934 LLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 934 ~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
+|..++..||+ +..++..|||...-...++.+++-
T Consensus 248 ~l~~~~~~rp~----~~~l~~~~ff~D~~~~aLrfLD~l 282 (700)
T KOG2137|consen 248 LLNGDSAVRPT----LDLLLSIPFFSDPGLKALRFLDDL 282 (700)
T ss_pred HhcCCcccCcc----hhhhhcccccCCchhhhhhhcccc
Confidence 99999999998 999999999999888877666543
No 480
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.81 E-value=3e-08 Score=101.71 Aligned_cols=127 Identities=24% Similarity=0.197 Sum_probs=82.4
Q ss_pred EEEEEEEcCCCeEEEEEEeeccccc----------------------C-hhHHHHHHHHHHHHHhCCCC--CcceEEEEE
Q 001869 684 SVHLVELCGSGQYFAMKAMDKGVML----------------------N-RNKVHRACAEREILDMLDHP--FVPALYASF 738 (1002)
Q Consensus 684 ~Vy~a~~~~~~~~vaiK~~~~~~~~----------------------~-~~~~~~~~~E~~il~~l~hp--nIv~l~~~~ 738 (1002)
.||.|.. .+|..+|||+.+..... . ........+|...|.++..- ++++++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4888887 56789999988753110 0 01123455799999999755 577777543
Q ss_pred EeCCeEEEEEecCC--CCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-HHHcCcccCCCCCCCEEEccCCcEEEEec
Q 001869 739 QTKTHVCLITDYCP--GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY-LHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~--ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~y-LH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
.-+|||||++ |..+..+.... ++......++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+||
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred ----CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 2379999997 65565543321 2244566777888885555 579999999999999999976 9999999
Q ss_pred cCCcc
Q 001869 816 DLSCL 820 (1002)
Q Consensus 816 G~a~~ 820 (1002)
|.+..
T Consensus 151 ~qav~ 155 (188)
T PF01163_consen 151 GQAVD 155 (188)
T ss_dssp TTEEE
T ss_pred Cccee
Confidence 98844
No 481
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.79 E-value=1.4e-07 Score=81.19 Aligned_cols=103 Identities=27% Similarity=0.424 Sum_probs=88.8
Q ss_pred ccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEE
Q 001869 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKF 560 (1002)
Q Consensus 481 ~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (1002)
++++++++|.+|. ++++|+++++++|++.++++|+....+.++.........+...+..+.....+......+|...
T Consensus 1 ~~~~i~~~d~~~~---~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDLDGR---ILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECCCCc---EEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999999777 9999999999999999999999977777777766666666666666667788888888999999
Q ss_pred EEEEEEEeeeCCCCCEEEEEEEEecC
Q 001869 561 WNLFHLQPMRDQKGEVQYFIGVQLDG 586 (1002)
Q Consensus 561 wv~~~~~pi~d~~G~v~~~vgi~~DI 586 (1002)
|+.....++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999889999999999986
No 482
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.78 E-value=5.9e-08 Score=110.60 Aligned_cols=221 Identities=17% Similarity=0.190 Sum_probs=153.5
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001869 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (1002)
Q Consensus 192 ~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (1002)
+.+++.+.++++++|.. ..|+++|..+..+++-....++|+++..+.++...+.. ..+ ..+..-.....
T Consensus 4 ~~~l~~~~~~~~vi~~~---~~~~~~~~~a~~~~~~~~~~~i~~~~~~i~~~~~~~~v-------~~~-~~~~~~~~~~~ 72 (560)
T COG3829 4 EGILKSILDGPVVIDKN---TGIDVANALALAKRQKNAEAVIGRPLREILETLGMERV-------EQS-RDKELTERLKL 72 (560)
T ss_pred hhhhhhcccceEEEEcC---CceeeechHHHHhhhcceEEEecccceeeccccCccee-------ecc-Cccceeeeeec
Confidence 44899999999999984 45999999999999999999999988876665443321 122 22222222223
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhHHHHHHHHHHHhHHHHHHHHHHccCCCC
Q 001869 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351 (1002)
Q Consensus 272 kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1002)
+ + . -..+...++.++.|+++|++.++.|+++....-++..
T Consensus 73 ~-~-~-~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~l------------------------------------- 112 (560)
T COG3829 73 K-V-K-RIVVVGKTPVDEQGRVVGVLEVFLDISEALELIEENL------------------------------------- 112 (560)
T ss_pred c-c-e-eEEEcCCceeecCCceeeeehhhhhhHHHHHHHHHHH-------------------------------------
Confidence 3 3 2 2334444556788999999999999998444332210
Q ss_pred cccCCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccccccC
Q 001869 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQST 431 (1002)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1002)
T Consensus 113 -------------------------------------------------------------------------------- 112 (560)
T COG3829 113 -------------------------------------------------------------------------------- 112 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCC
Q 001869 432 DDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS 511 (1002)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys 511 (1002)
..+.+ .|+.+++.+.++++++|..|. ++++|.++..++|++
T Consensus 113 -------------------------------~~~~~-----~l~~il~~~~~~l~vvD~~G~---~i~~N~~~~~~~gl~ 153 (560)
T COG3829 113 -------------------------------RQLRQ-----RLEAILDSIDDGLLVVDEDGI---IIYYNKAYAKLLGLS 153 (560)
T ss_pred -------------------------------HHHHH-----HHHHHHhhccCceEEEcCCCc---EEEEcHHHHHHhCCC
Confidence 00111 189999999999999999888 999999999999999
Q ss_pred hhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccc
Q 001869 512 REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 512 ~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~ 591 (1002)
.++++|++...+.....+ ......+..+.+.......+..++. -.+..|++ .+|.+.|.+++.+|+++-+.
T Consensus 154 ~e~~~gk~~~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~~~~~----i~~~~pv~-~~g~l~G~v~~~~~~~~l~~ 224 (560)
T COG3829 154 PEEVLGKHLLDVVSAGED----STLLEVLRTGKPIRDVVQTYNGNKI----IVNVAPVY-ADGQLIGVVGISKDVSELER 224 (560)
T ss_pred HHHHcCCcHHHHHhccCC----ceehhhhhcCCcceeeeeeecCCce----eEeeccEe-cCCcEEEEEEeecchHHHHH
Confidence 999999997666411111 1234566777765555444333332 34556666 46799999999999998765
No 483
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.77 E-value=1.8e-07 Score=80.62 Aligned_cols=102 Identities=25% Similarity=0.477 Sum_probs=86.8
Q ss_pred CCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 001869 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (1002)
Q Consensus 199 ~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 278 (1002)
+++++++|. +|.++++|++++.++|++.++++|+.+..+.++.........+...+..+.....+......+|...|
T Consensus 2 ~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (103)
T cd00130 2 PDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVIW 78 (103)
T ss_pred CceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEEE
Confidence 578899998 77799999999999999999999999877777766666666666666666667778888888999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEecc
Q 001869 279 NLLTIAPIKDDEGKVLKFIGMQVEV 303 (1002)
Q Consensus 279 ~~~~~~pi~d~~G~v~~~v~~~~DI 303 (1002)
+.+...++.+.+|...+++++++||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 79 VLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEecCCCCEEEEEEEEecC
Confidence 9999999999888999999999886
No 484
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.77 E-value=1.3e-07 Score=103.81 Aligned_cols=238 Identities=19% Similarity=0.249 Sum_probs=154.4
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEE------EEEeC-CeE
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA------SFQTK-THV 744 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~------~~~~~-~~~ 744 (1002)
..+.||+|+-+.+|-.-... -.+-|+++.....- -.+....|... .||-+..-+. +..+. ..+
T Consensus 15 ~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Pppa~------~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPPAA------QAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCccccCCccceeeecchhh---chhheeecCCCchH------HHHHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 45779999999999765433 35678887652211 11123333333 5664432111 11122 237
Q ss_pred EEEEecCCCCc-HHHHH----hhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 745 CLITDYCPGGE-LFLLL----DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 745 ~lV~E~~~ggs-L~~~l----~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
.++|..+.|.. +..++ +++.........+...++.|+.+.+.||..|.+-+|++++|+|+++++.|.|+|-....
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 88899886642 22222 23455667889999999999999999999999999999999999999999999876432
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG 894 (1002)
.. .+.......+|.+.|.+||... +..-+...|-|.||+++++++.|
T Consensus 166 i~----------------------------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~g 217 (637)
T COG4248 166 IN----------------------------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFG 217 (637)
T ss_pred ec----------------------------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhc
Confidence 21 1112233458999999999864 23345579999999999999985
Q ss_pred -CCCCCCCChH----HHHH-HHHhCC-----------CCCCC---CCCCCHHHHHHHHHcccc--CcCCCCCChh
Q 001869 895 -YTPFRGKTRQ----KTFA-NILHKD-----------LKFPS---STPTSLHAKQLMYRLLHR--DPKSRLGSHE 947 (1002)
Q Consensus 895 -~~Pf~~~~~~----~~~~-~i~~~~-----------~~~~~---~~~~s~~~~~Ll~~~L~~--dP~~Rpt~~~ 947 (1002)
+.||.|.... .-+. .|..+. .+-|. +.-+++.++.|..+|+.. ++.-|||...
T Consensus 218 grHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 218 GRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred CCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 9999763110 0111 222211 11121 123567888999999975 3567999754
No 485
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.74 E-value=3.2e-08 Score=112.91 Aligned_cols=113 Identities=12% Similarity=0.112 Sum_probs=89.2
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.+++++++|++++|.+|. |+++|+++++++||+.++++|+++..+.+... .....+...+..+..+..+...+
T Consensus 9 ~~~il~~~~~gi~~~d~~~~---i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 83 (348)
T PRK11073 9 AGQILNSLINSILLLDDDLA---IHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNEVTL 83 (348)
T ss_pred HHHHHhcCcCeEEEECCCCe---EeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccceEE
Confidence 79999999999999999777 99999999999999999999999877765432 22344555666666555555556
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccC
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~ 596 (1002)
.+||..+|+.++..|+. . .+++..++|||++++.++++
T Consensus 84 ~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~ 121 (348)
T PRK11073 84 VIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQ 121 (348)
T ss_pred EECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHH
Confidence 78999999999999997 2 24677899999998765433
No 486
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.73 E-value=4.3e-08 Score=110.41 Aligned_cols=114 Identities=15% Similarity=0.135 Sum_probs=89.2
Q ss_pred cchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEE
Q 001869 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (1002)
Q Consensus 185 ~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (1002)
.+..+.|+.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+..+ . .+...+..+.. .
T Consensus 2 ~~~~~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~---~----~~~~~l~~~~~-~ 70 (333)
T TIGR02966 2 SALLSRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRH---P----EFVEYLAAGRF-S 70 (333)
T ss_pred hhHHHHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccC---H----HHHHHHHhccc-C
Confidence 35567899999999999999999 777999999999999999999999998766443 2 23344444332 2
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
.......++|..+|+.+.+.|+.+.+ ++++++|||++++.++.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~~ 115 (333)
T TIGR02966 71 EPLELPSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMRR 115 (333)
T ss_pred CCeEeecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHHH
Confidence 23445568899999999999997642 6788999999998877654
No 487
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.71 E-value=9.9e-08 Score=106.77 Aligned_cols=120 Identities=27% Similarity=0.604 Sum_probs=106.3
Q ss_pred HHHHHHhcc---ccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEE
Q 001869 474 LATTLERIE---KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (1002)
Q Consensus 474 l~~i~e~~~---~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (1002)
|+.++..+. ..+++.++.-.|++|+|+|+.||++.||.+.|++.++ +.+++++-.+....+.+++.+.+.+.-.+
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qf 95 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQF 95 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcce
Confidence 677775554 4455555555689999999999999999999999988 57788888888899999999999999999
Q ss_pred EEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccc
Q 001869 549 QLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
|+.++.|+.+.+|..+.+.||+++...++.|++.++|||.-||+-
T Consensus 96 EillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQPi 140 (971)
T KOG0501|consen 96 EILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQPI 140 (971)
T ss_pred eeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCCC
Confidence 999999999999999999999999999999999999999999973
No 488
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.71 E-value=1e-07 Score=116.74 Aligned_cols=139 Identities=16% Similarity=0.141 Sum_probs=105.3
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc-EEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLIN 552 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~-~~~e~~~ 552 (1002)
++.++++++++++++|.+|. ++++|+++++++||+.++++|+++..+.++.. .....+...+..+.. ...+...
T Consensus 264 ~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 338 (607)
T PRK11360 264 NELILESIADGVIAIDRQGK---ITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTEHVDLEISF 338 (607)
T ss_pred HHHHHHhccCeEEEEcCCCC---EEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCCccceEEEE
Confidence 78899999999999999777 99999999999999999999999877776542 233444555555444 4456667
Q ss_pred EecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccCCchhhhHHHHHHHHHHhhhhhh
Q 001869 553 YTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNE 618 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~~~~~~~v~~ 618 (1002)
.+++|..+ +.++..|+++.+|++.+++++++|||++++.+++++.......+.+.+..+.|.+..
T Consensus 339 ~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~~~~~~~l~~~~~~~~hel~~ 403 (607)
T PRK11360 339 PGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVARQERLAALGELVAGVAHEIRN 403 (607)
T ss_pred EcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 78888876 899999999999999999999999999998766544333333333344444444444
No 489
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.70 E-value=2.1e-07 Score=114.00 Aligned_cols=128 Identities=13% Similarity=0.124 Sum_probs=105.5
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCC
Q 001869 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (1002)
Q Consensus 182 ~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (1002)
..+.+....++.++++++++++++|. +|+|+++|+++++++||+.++++|+++..++++.. .....+...+..+.
T Consensus 255 ~~l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 329 (607)
T PRK11360 255 QALRETRSLNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGT 329 (607)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCC
Confidence 34666777889999999999999998 77799999999999999999999999887776542 23344555565554
Q ss_pred c-EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001869 262 S-YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 262 ~-~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~ 315 (1002)
. ...++...+++|..+ +.++..|+.+.+|.+.+++++++|||++++++++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~ 383 (607)
T PRK11360 330 EHVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVAR 383 (607)
T ss_pred CccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHH
Confidence 4 345667778888876 8999999999999999999999999999999988763
No 490
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.68 E-value=1.8e-07 Score=106.67 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=92.5
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001869 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (1002)
...++++++++++|++++|. +|+|+++|++|++++||+.++++|+++..+.+... .....+...+..+..+..+.
T Consensus 6 ~~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 80 (348)
T PRK11073 6 LPDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNE 80 (348)
T ss_pred cchHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccc
Confidence 35678999999999999998 78899999999999999999999999887765432 22344556666666555444
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
..+.+||..+|+.++.+|+. . .+++..++|||++++.++++.
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~ 122 (348)
T PRK11073 81 VTLVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred eEEEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHH
Confidence 55678999999999999986 2 245677899999998877654
No 491
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.66 E-value=8.9e-08 Score=89.22 Aligned_cols=106 Identities=15% Similarity=0.268 Sum_probs=73.7
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEE
Q 001869 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (1002)
Q Consensus 191 l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 270 (1002)
++.++++++.+++++|. +++|+++|+++.++++... ..+|+++..+.++.........+ +.+..++....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~~~~l~~~i-~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPLSYPNLKKII-EQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HHHHHHHHHHH-HHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCccchHHHHHHH-HHHHcCCCceEEEEe-
Confidence 46789999999999999 7889999999999999774 55899999887764444444444 444455542333332
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 271 ~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
..+|. |+.+++.|++|.+|++.|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35554 678899999999999999999999998
No 492
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.62 E-value=1.8e-07 Score=98.47 Aligned_cols=137 Identities=21% Similarity=0.195 Sum_probs=101.1
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc-----------------C--hhHHHHHHHHHHHHHhCCCC--
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----------------N--RNKVHRACAEREILDMLDHP-- 729 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-----------------~--~~~~~~~~~E~~il~~l~hp-- 729 (1002)
+.+...||-|.-|.||.|.+. .|.++|||.-+..... . ........+|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 445578999999999999984 6889999975532110 0 01122345788999999655
Q ss_pred CcceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc
Q 001869 730 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 809 (1002)
Q Consensus 730 nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~ 809 (1002)
.|+..+++ +.-++||||++|-.|...- +..+....++..|++-+..+-..||||+|+.+-||+++++|.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 77777764 4458999999887775542 234445556666776666666899999999999999999999
Q ss_pred EEEEeccCCc
Q 001869 810 VSLTDFDLSC 819 (1002)
Q Consensus 810 vkL~DFG~a~ 819 (1002)
+.++||--+.
T Consensus 241 ~~vIDwPQ~v 250 (304)
T COG0478 241 IVVIDWPQAV 250 (304)
T ss_pred EEEEeCcccc
Confidence 9999999663
No 493
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.60 E-value=5.6e-07 Score=94.63 Aligned_cols=126 Identities=25% Similarity=0.252 Sum_probs=91.3
Q ss_pred CCeEEEEEEeecccccC----hhHHHHHHHHHHHHHhCCC--CCcceEEEEEEeC----CeEEEEEecCCCC-cHHHHHh
Q 001869 693 SGQYFAMKAMDKGVMLN----RNKVHRACAEREILDMLDH--PFVPALYASFQTK----THVCLITDYCPGG-ELFLLLD 761 (1002)
Q Consensus 693 ~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~----~~~~lV~E~~~gg-sL~~~l~ 761 (1002)
.++.|.+|......... +-...+..+|...+..|.. -.++.++.+.... ...++|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 35566666433221111 1233456778877777743 3355666666542 2458999999874 8999987
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---cEEEEeccCCcc
Q 001869 762 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 820 (1002)
Q Consensus 762 ~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g---~vkL~DFG~a~~ 820 (1002)
.... ++......++.+++..++-||.+||+|+|++|.|||++.++ .+.|+||+.+..
T Consensus 111 ~~~~--~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 111 QWEQ--LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred hhcc--cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 6322 66777888999999999999999999999999999999887 899999998754
No 494
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.60 E-value=1.8e-07 Score=105.34 Aligned_cols=103 Identities=11% Similarity=0.022 Sum_probs=81.5
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
|+.++++++++|+++|.+|. |+++|++|++++||++++++|++...+.+++ . +...+..+.. .....+.
T Consensus 8 l~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~---~----~~~~l~~~~~-~~~~~~~ 76 (333)
T TIGR02966 8 FRAAAQALPDAVVVLDEEGQ---IEWCNPAAERLLGLRWPDDLGQRITNLIRHP---E----FVEYLAAGRF-SEPLELP 76 (333)
T ss_pred HHHHHHhCcCcEEEECCCCc---EEEEcHHHHHHhCCChHHHcCCcHHHHccCH---H----HHHHHHhccc-CCCeEee
Confidence 89999999999999999777 9999999999999999999999977665432 2 2333333322 2335556
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~ 592 (1002)
.++|..+|+.++..|+.+.. ++++++|||++++.
T Consensus 77 ~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~ 110 (333)
T TIGR02966 77 SPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRL 110 (333)
T ss_pred cCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHH
Confidence 68999999999999997643 67889999998874
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.54 E-value=1.2e-06 Score=90.41 Aligned_cols=141 Identities=13% Similarity=0.138 Sum_probs=102.0
Q ss_pred ccCCcEEEEEEEEcCCCeEEEEEEeecc---cccChhHHHHHHHHHHHHHhCCCC--CcceEEEEEEe----CCeEEEEE
Q 001869 678 GSGDTGSVHLVELCGSGQYFAMKAMDKG---VMLNRNKVHRACAEREILDMLDHP--FVPALYASFQT----KTHVCLIT 748 (1002)
Q Consensus 678 G~G~~g~Vy~a~~~~~~~~vaiK~~~~~---~~~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~~----~~~~~lV~ 748 (1002)
|+||.|-|+.... .|+.|-+|.-... ...-+.....+.+|...+..|..- .++++...... .-..+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 7799999999876 3346788865411 111133456788899888887432 25555522211 22468999
Q ss_pred ecCCC-CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc--EEEEeccCCcc
Q 001869 749 DYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 820 (1002)
Q Consensus 749 E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~--vkL~DFG~a~~ 820 (1002)
|-+.| .+|.+++....-...+......++.+++.++.-||+.|+.|+|+.+.||+++.+|. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97743 68888886543345677778899999999999999999999999999999987777 99999997743
No 496
>PF12860 PAS_7: PAS fold
Probab=98.52 E-value=3.6e-07 Score=86.49 Aligned_cols=105 Identities=20% Similarity=0.275 Sum_probs=73.7
Q ss_pred HHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHH-cCCCCCcCC---------CCCCChHHHHHHHHHHHcCCcEE
Q 001869 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV-VGRNCRFLQ---------GAGTDPEDVAKIRETLQNGQSYC 264 (1002)
Q Consensus 195 le~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEl-iG~~~~~l~---------~~~~~~~~~~~i~~~l~~g~~~~ 264 (1002)
|+++++||++.|. +|+++++|++|.+++|++.+.+ .|.++..+. .+.............+.......
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4789999999999 8889999999999999999998 788865332 11222222333333333333333
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 001869 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (1002)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (1002)
.+ ....||. |++++..|+ .+| |+|.++.|||+++++|+
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhcC
Confidence 33 3468886 678888888 445 56788999999999874
No 497
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.52 E-value=1.1e-06 Score=91.08 Aligned_cols=141 Identities=21% Similarity=0.258 Sum_probs=94.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHH------HHHHHHHHHhC---CCCCcceEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDML---DHPFVPALY 735 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~------~~~E~~il~~l---~hpnIv~l~ 735 (1002)
.+....|++++.+-......|.+..- +|+.+++|..+............ ..+.+..+..+ +.-....++
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y 104 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY 104 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence 35567899999999999888888876 67899999887542111111111 12233333333 323333333
Q ss_pred EEEE-----eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcE
Q 001869 736 ASFQ-----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 810 (1002)
Q Consensus 736 ~~~~-----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~v 810 (1002)
-+.. -....++||||++|..|.++.. +++ .+...|..++.-||+.|++|+|..|+|++++.+ .+
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i 173 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GI 173 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cE
Confidence 3222 2345578999999998877642 232 244567788999999999999999999999955 59
Q ss_pred EEEeccCC
Q 001869 811 SLTDFDLS 818 (1002)
Q Consensus 811 kL~DFG~a 818 (1002)
+++||+..
T Consensus 174 ~iID~~~k 181 (229)
T PF06176_consen 174 RIIDTQGK 181 (229)
T ss_pred EEEECccc
Confidence 99999965
No 498
>PF12860 PAS_7: PAS fold
Probab=98.50 E-value=3.9e-07 Score=86.19 Aligned_cols=105 Identities=22% Similarity=0.275 Sum_probs=73.6
Q ss_pred HHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhh-cCCCCcccc---------CCCCCHHHHHHHHHHHhcCCcEE
Q 001869 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI-LGRNCRFLQ---------GPETDPATVRKIRAAIDNQTDVT 547 (1002)
Q Consensus 478 ~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEl-iGk~~~~l~---------~~~~~~~~~~~l~~~l~~~~~~~ 547 (1002)
++++++||+++|.+|+ ++++|++|.+++|++.+.+ .|.++..+. .+.....................
T Consensus 1 Ld~l~~Gv~v~D~~~r---l~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDSDGR---LVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcCCCe---EEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 3678999999999777 9999999999999999998 787754332 12222223333333333433333
Q ss_pred EEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccc
Q 001869 548 VQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 548 ~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
.+ ....||. |+.++..|+ ++| +++.++.|||+++++|+
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhcC
Confidence 33 3468887 777888888 456 57899999999998653
No 499
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.50 E-value=4.2e-07 Score=101.87 Aligned_cols=111 Identities=34% Similarity=0.670 Sum_probs=99.2
Q ss_pred cEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCC--cCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 001869 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR--FLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (1002)
Q Consensus 201 ~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~--~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 278 (1002)
.+++.+..-.|..|+|+|..||++.||.+.|+..+++. +++.+..+....+.+++.++..+..+.|+..++|+...+|
T Consensus 29 sFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qfEillyKKN~TPvW 108 (971)
T KOG0501|consen 29 SFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQFEILLYKKNRTPVW 108 (971)
T ss_pred ceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcceeeEeeecCCCceE
Confidence 44444555558889999999999999999999999865 7788888899999999999999988999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 001869 279 NLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (1002)
Q Consensus 279 ~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (1002)
+.+.+.||+++...++-|++.++|||..|+--+
T Consensus 109 ~~vqiAPIrNe~d~VVLfLctFkDIT~~KQPid 141 (971)
T KOG0501|consen 109 LLVQIAPIRNEKDKVVLFLCTFKDITALKQPID 141 (971)
T ss_pred EEEEeecccCCCceEEEEEeecccchhhcCCCc
Confidence 999999999999999999999999999887543
No 500
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.48 E-value=4.4e-07 Score=84.52 Aligned_cols=106 Identities=20% Similarity=0.310 Sum_probs=73.0
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
|+.++++++.++.++|.+++ |.+.|+++.++|+.. ...+|++...+.++.......+.+ +.+..++....+...
T Consensus 1 L~~il~s~~~~i~~vD~~~~---I~~~n~~a~~~f~~~-~~~iGr~l~~~~~~~~~~~l~~~i-~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDRNLR---IRYFNPAAARLFNLS-PSDIGRPLFDIHPPLSYPNLKKII-EQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEE-SCGC-SS----GGGTTSBCCCSS-HHHHHHHHHHH-HHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcCCCe---EEEeChhHhhhcCCC-hHHCCCCHHHcCCccchHHHHHHH-HHHHcCCCceEEEEe-
Confidence 46789999999999999666 999999999999976 466899988777664433344444 444555543333332
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
..+|. |+.++..|+++++|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35555 777899999999999999999999998
Done!